Biology 2014

Stratton OpenersBiology Semester 2, 2015-16

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Organic ChemistryBiology

1

Class38

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Opener 2/8-9/16Remember to use complete sentences.What are the four basic elements of life?Name a simple sugar.Write the chemical formula for one of the molecules in Image A.In general terms what are the structures in Image B called?

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Opener 2/8/16Remember to use complete sentences.What are the four basic elements of life?

Carbon, Hydrogen, Oxygen, and Nitrogen are the four basic elements of life. (HONC)2. Name a simple sugar.

Glucose, fructose, and galactose are all simple sugars.

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Opener 2/8-9/16Remember to use complete sentences.Write the chemical formula for one of the molecules in Image A.

The formula is written: C6H12O6.4. In general terms what are the structures in Image B called?

The structures in Image B are called carbon rings.

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Class 1 2/8-9/16OpenerSpectrometersOrganic ChemistryReview basic chemistryOrganic think carbonIsomersFunctional groupsSaccharides (mono-, di-, & poly-)Know how atoms bond, HONC bonding numbers.Know the following organic functional groups. CH3 and CH2, COOH, OH, NH2, SH, PO4Methyl, Hydroxyl, Carboxyl, Amino, Sulfhydryl, PhosphateBe able to compare and contrast mono-, di-, & polysaccharides.Be able to draw the chain structural formulas of monosaccharaides isomers.Understand the following processes: dehydration synthesis and hydrolysis.

AgendaTargets

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Each of two or more compounds Same formula Different arrangement of atoms Different properties Chemical Formula Isomers

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2/10 & 16/16Organic Chemistry Basics

2&3

Class38

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Opener 2/10 & 16/16Remember to use complete sentences.How many bonding sites does Image A have?What is a monosaccharide?What elements atom will typically fill in when only a single bond is available?

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Class 1 2/8-9/16OpenerOrganic ChemistryReview basic chemistryOrganic think carbonIsomersFunctional groupsDehydration Synthesis & HydrolysisSaccharides (mono-, di-, & poly-)Know how atoms bond, HONC bonding numbers.Know the following organic functional groups. CH3 and CH2, COOH, OH, NH2, SH, PO4Methyl, Hydroxyl, Carboxyl, Amino, Sulfhydryl, PhosphateBe able to compare and contrast mono-, di-, & polysaccharides.Be able to draw the chain structural formulas of monosaccharaides isomers.Understand the following processes: dehydration synthesis and hydrolysis.

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Each of two or more compounds Same formula Different arrangement of atoms Different properties Chemical Formula Isomers

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Variety of combinations Create different organic molecules Attach to carbon chains and rings.

Organic functional groups

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Single ring is called a monosaccharide (mono = one / saccharide = sugar). These are simple sugars. Double rings are called a disaccharide. (di = two / saccharide = sugar). These are more complex sugars. Multiple rings are called polysaccharides. (poly = many / saccharide = sugar). These are the most complex sugars.

Saccharides (Sugars, Carbohydrates)

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2/12-13/16Organic Chemistry

2&3Stratt out Sub

Class38

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Opener 2/10 & 16/16Remember to use complete sentences.What is formed when 2 monosaccharaides combine?What is the process shown in Image A?What is the ratio of oxygen and hydrogen only found in carbohydrates ?Describe the difference and similarities between isomer compounds.

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Opener 2/10 & 16/16Remember to use complete sentences.What is formed when 2 monosaccharaides combine? Disaccharides are formed when two monosaccharaides combine.What is the process shown in Image A? The process shown in Image A is dehydration synthesis.

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Opener 2/10 & 16/16Remember to use complete sentences.What is the ratio of oxygen and hydrogen only found in carbohydrates ? The ratio of two hydrogen to one oxygen (2:1) is found in carbohydrates. It is the same as water.Describe the difference and similarities between isomer compounds. Isomers have the same molecular formulas, but different structural formulas.

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Class 2/3 2/12-13/16OpenerOrganic ChemistryThe Secret of Life Video Discovering DNAWatch video & take note about discovery of DNA.Know who discovered formation of DNA.Understand the controversy surrounding this discovery.

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2/17-18/16Basic Organic Chemistry

4

Class38

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Opener 2/17-18/16Remember to use complete sentences.What process is shown in Image A?How are disaccharides turned into monosaccharaides?What does the octet rule state?What are the four major organic compounds (polymers)?

Image BImage A

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Opener 2/17-18/16Remember to use complete sentences.What process is shown in Image A? The process is dehydration synthesis, the removal of H20 to make a larger polymer.How are disaccharides turned into monosaccharaides? Through the process of hydrolysis a water is added to a polymer breaking into smaller monomers.What does the octet rule state? Theoctet ruleis a chemical rule of thumb reflecting observations that atoms of main-group elements tend to combine in such a way that each atom has eight electrons in itsvalence shell (outermost shell).What are the four major organic compounds (polymers)? Carbohydrates, lipids, proteins and nucleic acids are the four major organic compounds.Image BImage A

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Class 4 2/18-19/16Finish video The Secret of Life Turn in questionsOpenerOrganic ChemistrySaccharides (mono-, di-, & poly-)Major organic compounds (polymers)Carbohydrates (today)Lipids (today)Proteins (homework, next class)Nucleic Acids (homework, next class)DNA & RNA (homework, next class)Homework: Read packet on proteins, nucleic acid, DNA &RNA (top of page only)Do fill out/answer questions through page 10chart pg. 12 (Carbohydrates & Lipids

Be able to compare and contrast mono-, di-, & polysaccharides.Be able to draw the chain structural formulas of monosaccharaides isomers.Understand the following processes: dehydration synthesis and hydrolysis.Be able to identify whether a polymer is a carbohydrate, lipid, or protein.Know the difference between saturated and unsaturated lipids.Know the basics of DNA & RNA molecules.15 pt. Quiz next class

AgendaTargets

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Carbohydrates

For this class: Polysaccharides3+ monomers(e.g. glycogen, cellulose, starch, chitin, amylose)

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Disaccharides

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Carbohydrates

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Polysaccharides

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Polysaccharides

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Polysaccharides

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2/19-22/16Basic Organic Chemistry

5

Class38

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Opener 2/19-22/16Remember to use complete sentences.Give an example of a lipid.What kind of a carbohydrate is a starch? Which kind of compound has a 2H:1O ratio?Explain how two monomers of sugar join.

Image BImage A

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Class 5 2/19-22/16Turn in questions The Secret of Life OpenerQuiz no notesOrganic Chemistry PacketMajor organic compounds (polymers)Carbohydrates Lipids Proteins (today)Nucleic Acids (today)DNA & RNA (today)Homework: Fill out/answer last of packetDNA Activity Lab next class

Be able to compare and contrast mono-, di-, & polysaccharides.Be able to draw the chain structural formulas of monosaccharaides isomers.Understand the following processes: dehydration synthesis and hydrolysis.Be able to identify whether a polymer is a carbohydrate, lipid, or protein.Know the difference between saturated and unsaturated lipids.Know the basics of DNA & RNA molecules.15 pt. Quiz

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2/23-24/16Cellular Processes DNA

6

Class38

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Opener 2/23-24/16What are the four bases of DNA?What does DNA code for?What is replication?What is the basic unit of DNA called?

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2/23-24/16What are the four bases of DNA?Adenine, Thymine, Guanine, CytosineWhat does DNA code for? ProteinsWhat is replication? Copying of DNA, making an exact copyWhat is the basic unit of DNA called? Nucleotide

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Class 6 2/23-24/16OpenerActivity: Have Your DNA and Eat It Too!Reading DNA

Test Retake/Make-upThurs., Feb. 25 After School70% of retake or average of two test (whichever is highest)Learn the basics of DNA.Learn the four DNA bases.Develop a DNA Vocabulary.Know what a nucleotide is.Understand the shape of DNA.Know where DNA is located.Know who discovered DNA.Understand the importance of the double helix.Be able to draw and label a Nucleotide.Be able to label a basic DNA drawing.Be able to explain what a genome is.Have an basic understanding of medical implications of genomics.

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Go to class websiteGo to Quizzes & Tests pageClick on http://socrative.com/Choose studentLast name, first nameOrganic Chemistry Quiz

http://socrative.com/Room: 296186Question on # of amino acids should read 300 not 200.If the number of bases in a sequence of a gene coding for a protein is composed of 300 amino acids how many bases are there?

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Socrative Student Logon

296186

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2/18/15Cellular Processes DNA

7

Class38

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2/20/15Cellular Processes DNA

9

Class38

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Opener 2/20/15Write in complete sentences.Why is DNA referred to as a double helix?What do the marshmallows represent in your DNA model?How is DNA & RNA different?Why is knowledge about DNA and Protein Synthesis important for people to understand?Image BImage A

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Class 9 2/23/15OpenerActivity: Have Your DNA and Eat It Too!Reading DNAVideo: PBS The Secret of LifeTest Retake/Make-upThurs., Feb. 19 After School70% of retake or average of two test (whichever is highest)Learn the basics of DNA.Learn the four DNA bases.Develop a DNA Vocabulary.Know what a nucleotide is.Understand the shape of DNA.Know where DNA is located.Know who discovered DNA.Understand the importance of the double helix.Be able to draw and label a Nucleotide.Be able to label a basic DNA drawing.Be able to explain what a genome is.Have an basic understanding of medical implications of genomics.

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2/24/15Cellular Processes DNA

10

Class38

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Opener 2/24/15Write in complete sentences.Explain the differences between DNA & RNA? (there are 3 major)__________________________________________________________________How many carbons are in DNA & RNA sugars?How many codon(s) is/are matched with an amino acid?

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Opener 2/24/15Explain the differences between DNA & RNA? (there are 3 major)2x Stranded vs 1x StrandedDeoxyribose vs Ribose sugarThymine vs UracilHow many carbons are in DNA & RNA sugars?Pentose 5 carbonsHow many codon(s) is/are matched with an amino acid? 1codon = 1 Amino Acid

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Class 9 2/24/15OpenerActivity: Video: PBS The Secret of LifeVideo: Amoeba Sisters Video Recap DNA vs. RNA & Protein SynthesisReview the four DNA bases.Use DNA/RNA Vocabulary.Know what a nucleotide is.Understand the shape of DNA vs. RNA.Know where DNA & RNA are located.Know who discovered DNA.Understand the importance of the double helix.Be able to draw and label a Nucleotide.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.

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2/26/15Cellular Processes DNA

11

Class38

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Opener 2/26/15Write in complete sentences.Draw how bases pair during translation?What are strings of amino acids called?What is the shape of DNA & RNA sugars? Why is it this shape?Where is DNA found?

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Class 11 2/26/15OpenerLab: DNA Extraction from Strawberries.Review the four DNA bases.Use DNA/RNA Vocabulary.Know what a nucleotide is.Understand the shape of DNA vs. RNA.Know where DNA & RNA are located.Know who discovered DNA.Understand the importance of the double helix.Be able to draw and label a Nucleotide.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.

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3/2/15Cellular Processes DNA

12

Class38

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Opener 3/2/15Write in complete sentences.List three differences between DNA and RNA?What are proteins made out of?How is ribose sugar different from deoxyribose sugar?In which process is there a clover leaf like structure?

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Class 11 2/26/15OpenerFinish Lab: DNA Extraction from Strawberries.Video (?)Amoeba Sisters Video Recap DNA vs. RNA and Protein SynthesisOther Room Quiz (15 pts.) next class on DNA & RNA Computer Graphing of LabReview the four DNA bases.Use DNA/RNA Vocabulary.Know what a nucleotide is.Understand the shape of DNA vs. RNA.Know where DNA & RNA are located.Know who discovered DNA.Understand the importance of the double helix.Be able to draw and label a Nucleotide.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.

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3/4/15Cellular Processes DNA

13

Class38

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Opener 3/4/15Write in complete sentences.What are the steps of protein synthesis?What are proteins made out of?How is ribose sugar different from deoxyribose sugar?In which process is there a clover leaf like structure?

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Class 11 2/26/15OpenerQuestions before quizQuiz (15 pts.) on DNA & RNA Graphing Lab Results: DNA Extraction from Strawberries.Demonstrate knowledge of DNA & RNA.Use DNA/RNA Vocabulary.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.Demonstrate ability to graph data collected from lab following established criteria.

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Go to class websiteGo to Quizzes & Tests pageClick on http://socrative.com/Choose studentLast name, first nameDNA & RNA Quiz

http://socrative.com/

Room: 296186

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Socrative Student Logon

296186

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DNA & RNA QuizDifferences between DNA & RNABase pairingTypes of sugarsReplicationTranscriptionTranslation

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3/6/15Cellular Processes DNA

14

Class38

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Opener 3/4/15Write in complete sentences. Please use your composition books starting Tuesday.What are the parts of a data table?Why did you use extraction buffer in the strawberry lab?What components must every graph have?

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Class 11 2/26/15OpenerGraphing Lab Results: DNA Extraction from Strawberries.Demonstrate knowledge of DNA & RNA.Use DNA/RNA Vocabulary.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.Demonstrate ability to graph data collected from lab following established criteria.

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3/10/15Cellular Processes DNA

15

Class38

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Opener 3/10/15Write in complete sentences. Please use your composition books starting Tuesday.What are the parts of a graph?What is the white stringy material in the test tube?What is the process shown in Image B ?How do you know what the process in Image B is?

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Class 15 3/10/15OpenerGraphing Lab Results: DNA Extraction from Strawberries.DNA/RNA Graphic OrganizerDemonstrate knowledge of DNA & RNA.Use DNA/RNA Vocabulary.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.Demonstrate ability to graph data collected from lab following established criteria.

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3/12/15Cellular Processes DNA

16

Class38

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Class 16 Opener 3/12/15Write in complete sentences. Use composition books.What happens during transcription?How is transcription different from replication?What is the process shown in Image A ?How do you know what the process in Image B is?

Image BImage A

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Class 15 3/10/15OpenerTurn in: DNA Extraction from Strawberries.DNA/RNA Graphic OrganizerDemonstrate knowledge of DNA & RNA.Use DNA/RNA Vocabulary.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.Demonstrate ability to graph data collected from lab following established criteria.

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3/16/15Cellular Processes DNA

17

Class38

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Class 17 Opener 3/16/15Write in complete sentences. Use composition books.What is the DNA complementary strand for Image A?What process does Image A show?What is Image B?What is a mutation?How common are mutations?

Image BImage A

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Class 17 Opener 3/16/15Write in complete sentences. Use composition books.What is the DNA complementary strand for Image A?What process does Image A show?What is Image B?What is a mutation?How common are mutations?

Image B

Image A

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Class 17 3/16/15OpenerProtein Synthesis Exercise WorksheetMutations Worksheet

Demonstrate knowledge of Protein Synthesis.Use DNA/RNA Vocabulary.Be able to label a basic DNA drawing.Understand how DNA & RNA are different.Be able to explain how DNA & RNA work together to create proteins.Understand the types of mutations.

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3/18/15Cellular Processes DNA

18

Class38

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Class 18 Opener 3/18/15Write in complete sentences. Use composition books.What makes UAA, UAG and UGA unique codons?What happens if a single base is changed in a strand of DNA?What happens if an entire codon is changed in a DNA sequence?

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Class 18 3/18/15OpenerMutations Worksheet

Understand the types of mutations.3 ways DNA can be altered.Know the 5 possible results of mutations to DNA.

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3/30/15Cellular Processes DNA

19

Class38

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Class 19 Opener 3/30/15You have 10 minutes to complete.Write in complete sentences. Use composition books.What makes AUG a unique codons?What is the chart on the right called?Explain the process of protein synthesis in detail. Use the following terms in your explanation:

Image A

TranscriptionTranslation CodonClover-like mRNA tRNADNA

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Class 18 3/18/15Opener 10 min.Finish Mutations Worksheet 15-20 min.Get sections checked & signed offTurn in todayDo Say It With DNA worksheets to help you review protein synthesis before Fridays unit test.

Understand the types of mutations.Know 3 ways DNA can be altered.Know the 5 possible results of mutations to DNA.Review protein synthesis and begin preparing for unit test.Be able to explain replication, translation & transcription.Know the difference between DNA, mRNA and tRNA.Be able to explain the process of protein synthesis.Know what a codon is and its role in creation of proteins.Understand the role of amino acids in the production of proteins.

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4/01/15DNA

20

Class38

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Class 19 Opener 3/30/15You have 10 minutes to complete.Write in complete sentences. Use composition books.No Opener Today

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Class 20 4/01/15Opener 10 min.Turn in Mutations WorksheetDo Say It With DNA worksheets to help you review protein synthesis before Fridays unit test.Review Sheet (12 pgs.)Unit Test Study Guide

Understand the types of mutations.Know 3 ways DNA can be altered.Know the 5 possible results of mutations to DNA.Review protein synthesis and begin preparing for unit test.Be able to explain replication, translation & transcription.Know the difference between DNA, mRNA and tRNA.Be able to explain the process of protein synthesis.Know what a codon is and its role in creation of proteins.Understand the role of amino acids in the production of proteins.

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4/03/15DNA

21

Class38

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