fft using open- mp done by: hussein salim qasim & tiba zaki abdulhameed supervised by: dr. ajay...
TRANSCRIPT
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FFT USING OPEN-MPDONE BY: HUSSE IN S AL IM QAS IM & T IBA ZAK I ABDULHAMEED
SUPERVISED BY: DR. A JAY GUPTA
CS 5260 INTRODUCTION TO PARALLEL COMPUTING
APRIL 20 ,2015
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Outline•Fourier series
•Fourier Transform
•Discrete Fourier Transform (DFT) Algorithm
•Fast Fourier Transform (FFT) IMPLEMENTATION
•Example
•Divide and conquer
•Parallel Radix 2 FFT
•Result and Evaluation
• Conclusion.
•References.
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Fourier series Fourier series is a function which can be expressed as the sum of a series of sin and cos[1].
Where n=1,2,3,…
Fourier Coefficient of f
So, infinite sum f(x) is called the Fourier series of f.
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Fourier Transform (FT)The Fourier Transform is defined by the expression [1]:
Forward Fourier Transform: actually maps a time domain (series) into the frequency domain (series).
Inverse Fourier Transform:
Inverse Fourier Transform maps the domain of frequencies back into the corresponding time domain.
These two functions are inverses of each other.
Frequency domain ideas are important in many application areas. (audio, signal processing and image processing).
Fourier transform is not suitable for machine computation because infinity of samples have to be considered.
Function of the variable frequency
Function of the variable time
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Discrete Fourier Transform (DFT) AlgorithmFT of analogue signal x(t) [4].
(DFT) of a discrete-time signal x(nT)
For each k (N complex multiplication, N-1 complex adds)
dtexfkF tj)(
1
0
2N
n
nkNj
enxkX
nxnTx
Nk
1,1,0
2nO
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For N samples of x we have N frequencies representing the signal
X(0) = x[0]WN0 + x[1]WN
0*1 +…+ x[N-1]WN0*(N-1)
X(1) = x[0]WN0 + x[1]WN
1*1 +…+ x[N-1]WN1*(N-1)
:
X(k) = x[0]WN0 + x[1]WN
k*1 +…+ x[N-1]WNk*(N-1)
:
X(N-1) = x[0]WN0 + x[1]WN (N-1)*1 +…+ x[N-1]WN (N-1)(N-1)
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Fast Fourier Transform (FFT) (FFT) radix-2 (divide and conquer) [4]
Complex conjugate symmetry
Root of unity (gives 1 when raised to some integer power n).
Periodicity in n,k
*)()( kn
Nkn
NN WWWnNk
nNkNN
knN WWW
nNk )()(
12 kjN eWkN
NNj
We
2
1
0
N
n
nkNWnxkX
nnO log
Q1:Give three application of FFT?
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Application of (FFT) Digital filtering.
Image processing.
Voice recognition.
Solving partial differential equations and quick multiplication of large integers.
Solving the major inverse problem of reconstructing a signal from given frequency data.
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Example
primitive root of unity of n =n ( is the smallest integer of k=1, ..., n for which r^k=1) [1].
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Divide and conquer Build a big DFT from smaller ones [3]
Assume
Separate x[n] into even and odd –indexed subsequences
mN 2
12/
0
)12(12/
0
)2(1
0
]12[]2[*][][N
r
rkN
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rkNN
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n
WrXWrXWnXkXkn
Even rs
n=2r
Oddrs
12/
0
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0
2 )](12[)](2[N
r
krN
kN
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r
krN WrXWWrX
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r
rkN
N
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krN WrXWrX
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Divide and conquer Cont.
But
12/
0
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2 )](12[)](2[N
r
krN
kN
N
r
krN WrXWWrX
2/2/
22)
2(
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Nj
N WeeW
12/
02/
12/
02/ )](12[)](2[
N
r
krN
kN
N
r
krN WrXWWrX
N/2 DFT of even indexed samplesXe[k] [3]
N/2 DFT of odd indexed samplesXo[k]
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Parallel radix 2 FFT
Q2:What is the best network structure that fits Radix2?
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Q3:Implementing Radix 2 FFT on Open Mp, what are the shared variables?
W, N, x is shared ,
Q4:Do we need critical section?
No need for critical because we need read only
Q5: how much is the time complexity of parallel radix 2 FFT?
N/p + Log p
N-point DFTN/2 point DFTN/4 point DFT
X[0]
X[1]
X[2]
X[3]
X[4]
X[5]
X[6]
X[7]
x[0]
x[4]
x[2]
x[6]
x[1]
x[5]
x[3]
x[7]
-1
-1
-1
-1
-1
-1
-1
-1
w2
w2
w2
w1
w3-1
-1
-1
-1
N=8-point radix-2 DIT-FFT
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Parallel radix 2 FFT Assume number of elements and p number of processes [2]
1- The processes permute the input sequence and rearrange the indices. O(n/p) at each process.
2- Each process performs the first log n- log p iterations of FFT ( multiplications)
3-Final log p and swapping values with partners.
n/p
Log n/p
Log p
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Result and Evaluation We used Thor systems at Western Michigan university for execute implementation and performance evaluation.
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Execution
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TourqueSecript Serial
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TourqueSecript Parallel
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Serials
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SERIAL
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
268435456
5368709120
50
100
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350
400
Serial
Serial
N SIZE
EXEC
UTIO
N TI
ME
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2 Threads
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2 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
20
40
60
80
100
120
2 THREADS
2 Th
N SIZE
EXEC
UTIO
N TI
ME
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4 Threads
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4 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
10
20
30
40
50
60
70
4 THREADS
4Th
N SIZE
EXEC
UTIO
N TI
ME
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8 Threads
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8 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
5
10
15
20
25
30
35
40
8 THREASD
8 Th
N SIZE
EXEC
UTIO
N TI
ME
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16 Threads
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16 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
5
10
15
20
25
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35
40
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16 THREADS
16 Th
N SIZE
EXEC
UTIO
N TI
ME
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32 Threads
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32 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
5
10
15
20
25
30
35
32 THREADS
Series1
N SIZE
EXEC
UTIO
N TI
ME
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64 Threads
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64 Threads
2 4 8 16 32 64128
256512
10242048
40968192
1638432768
65536
131072
262144
524288
1048576
2097152
4194304
8388608
16777216
33554432
67108864
134217728
2684354560
5
10
15
20
25
30
3564 THREADS
64 Th
N size
Exec
ution
Tim
e
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Serial Vs. Parallel
2 4 8 16 32 64128
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4Th
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Serial Vs. Parallel
Serial 2 Th 4Th 8 Th 16 Th 32 Th 64 Th
N size
Tim
e
Thra
ds N
umbe
r
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Speed Up
N2 N4 N8N16
N32N64 N N N N N1 N3 N6 N1 N2 N5 N1 N2 N4 N8
N16N33
N67N13
N260
1
2
3
4
5
6
7
S2S8
S32
SPEED-UP
S2 S4 S8 S16 S32 S64N Size
Tim
e
Thre
ads N
umbe
rs
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Efficiencies
E2 E8E32
0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
N2N256 N3
N419...
FFT Parallel Efficiencies
N2 N4N8 N16N32 N64N128 N256N512 N1024N2048 N4096N8192 N16384N32768 N65536N131072 N262144N524288 N1048576N2097152 N4194304N8388608 N16777216N33554432 N67108864N134217728 N268435456
Threads Numbers
Tim
e
N siz
e
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Conclusion Discrete Fourier Transform (DFT) is a type of Fourier Transform with time complexity of O(N2).
The enhancement of DFT is FFT by reduce operation counts, and make it easy to parallel to get time complexity of O (N log N).
Many FFT algorithm and package were proposed with a verity of dimension such as: Fast Fourier Transform in the west package (FFTW). Radix-2 algorithm. Radix-4 algorithm and so on.
Parallel FFT is efficient when n is large.
FFT has good implementation using Butterfly.
Parallel FFT can implemented using MPI, OpenMP, and Cuda.
Using OpenMP we get Speed-up with factor of 7 and its related to number of threads.
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References [1] B. LIU, 'Parallel Fast Fourier Transform'. [Online]. Available: http://www.massey.ac.nz/~mjjohnso/notes/59735/seminars/03278999.pdf. [Accessed: 01- Apr- 2015].
[2] W. Petersen and P. Arbenz, Introduction to parallel computing. Oxford: Oxford University Press, 2004.
[3]E. Chu and A. George, Inside the FFT black box. Boca Raton, Fla.: CRC Press, 2000.
[4]B. Van Veen, 'The Fast Fourier Transform Algorithm', YouTube, 2012. [Online]. Available: https://www.youtube.com/watch?v=EsJGuI7e_ZQ. [Accessed: 02- Apr- 2015].
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