bifocal and pp1 interaction regulates targeting of the r-cell growth cone in drosophila
TRANSCRIPT
lsevier.com/locate/ydbio
Developmental Biology 2
Bifocal and PP1 interaction regulates targeting of the R-cell growth
cone in Drosophila
Kavita Babu a,*,1, Sami Bahri b, Luke Alphey c, William Chia a,2
a Temasek Life Science Laboratory and Department of Biological Sciences, 1 Research Link, National University of Singapore, 117604, Singaporeb Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos 138673, Singapore
c Department of Zoology, Oxford University, South Parks Road, Oxford, UK
Received for publication 16 February 2005, revised 7 September 2005, accepted 10 September 2005
Available online 8 November 2005
Abstract
Bifocal is a putative cytoskeletal regulator and a Protein phosphatase-1 (PP1) interacting protein that mediates normal photoreceptor
morphology in Drosophila. We show here that Bif and PP1-87B as well as their ability to interact with each other are required for photoreceptor
growth cone targeting in the larval visual system. Single mutants for bif or PP1-87B show defects in axonal projections in which the axons of the
outer photoreceptors bypass the lamina, where they normally terminate. The data show that the functions of bif and PP1-87B in either stabilizing
R-cell morphology (for Bif) or regulating the cell cycle (for PP1-87B) can be uncoupled from their function in visual axon targeting. Interestingly,
the axon targeting phenotypes are observed in both PP1-87B mutants and PP1-87B overexpression studies, suggesting that an optimal PP1
activity may be required for normal axon targeting. bif mutants also display strong genetic interactions with receptor tyrosine phosphatases,
dptp10d and dptp69d, and biochemical studies demonstrate that Bif interacts directly with F-actin in vitro. We propose that, as a downstream
component of axon signaling pathways, Bif regulates PP1 activity, and both proteins influence cytoskeleton dynamics in the growth cone of R
cells to allow proper axon targeting.
D 2005 Elsevier Inc. All rights reserved.
Keywords: Bifocal; Protein phosphatase-1 (PP1); Axon guidance; Photoreceptors; Optic lobe; Cytoskeleton; F-actin
Introduction
Precise axon targeting is achieved by integrating signaling
events involving guidance receptors and their downstream
components (Tessier-Lavigne and Goodman, 1996). Some of
the molecules involved in axonal guidance in the Drosophila
embryo also play a role in retinotopic axonal targeting,
suggesting that a similar set of molecules governs axon guidance
and normal topographic mapping of the axons in the embryo and
the fly visual system. These include Dock (Desai et al., 1999;
Garrity et al., 1996; Hing et al., 1999; Rao and Zipursky, 1998),
Trio (Awasaki et al., 2000; Bateman et al., 2000; Luo, 2000;
0012-1606/$ - see front matter D 2005 Elsevier Inc. All rights reserved.
doi:10.1016/j.ydbio.2005.09.017
* Corresponding author.
E-mail address: [email protected] (K. Babu).1 Present address: Department of Molecular Biology, Massachusetts General
Hospital, Richard B. Simches Research Building, 185 Cambridge Street, CPZN
7250, Boston, MA 02114, USA.2 Requests for reagents should be made to [email protected].
Newsome et al., 2000b), Lar (Clandinin et al., 2001; Krueger et
al., 1996; Maurel-Zaffran et al., 2001), Cadherins (Iwai et al.,
1997, 2002; Lee et al., 2001), Ephrins and their receptors
(Bossing and Brand, 2002; Dearborn et al., 2002; Palmer and
Klein, 2003; Schmucker and Zipursky, 2001; Yu and Bargmann,
2001), Protocadherins (Lee et al., 2003; Senti et al., 2003) and
Dptp69D (Desai and Purdy, 2003; Desai et al., 1996; Garrity et
al., 1999; Newsome et al., 2000a; Sun et al., 2000).
The Drosophila eye has 750–800 repeats of a basic unit
called an ommatidium and comprised of 8 photoreceptor cells
(R1–R8). Overlying these photoreceptor cells are four cone
cells and two primary pigment cells surrounding the cone cells.
The eight axons from the photoreceptors of an ommatidial unit
in the eye travel via the optic stalk into the optic lobe region of
the brain as part of an ommatidium-specific fascicle with the
axons of R1–R7 surrounding the R8 axon (Hanson, 1993).
Incoming R-cell axons induce the production and differentia-
tion of glia in the optic lobe lamina (Huang and Kunes, 1998;
Selleck and Steller, 1991; Winberg et al., 1992). Lamina
88 (2005) 372 – 386
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K. Babu et al. / Developmental Biology 288 (2005) 372–386 373
differentiation by R-cell-derived signals plays a crucial role in
matching the number of afferents to their targets. Different R
cells in the eye disc extend axons that terminate at different
levels in the optic lobe. The 6 outer photoreceptors, R1–R6, of
each ommatidium terminate their axons at the outer layer of the
optic lobe or the lamina, while the inner two photoreceptors R7
and R8 send their axons beyond the lamina into the second
optic ganglion, the medulla (Hanson, 1993). The growth cone
from an initial R8 neuron can be thought to pioneer the path to
retinotopic target destination and enters the optic lobe first,
while the growth cones of R2 and R5, R3 and R4, R1 and R6
and R7 follow in sequence along the expanding ommatidial
fiber. This process of axonal targeting is apparent by the third-
instar larval stage of Drosophila development, such that at this
stage a very precise pattern of connectivity is apparent, with R1
to R6 axons ending at the lamina and R7 and R8 axons entering
the medulla and sending their axons into two distinct
neuropiles in the medulla (Kunes and Steller, 1993; reviewed
by Kunes, 1999; Kunes et al., 1993).
Targeting errors for R-cell axons have been described for
several mutations including those of the receptor tyrosine
phosphatase receptors such as dlar, dptp69d and off-track
(Cafferty et al., 2004; Clandinin et al., 2001; Garrity et al., 1999).
Downstream components of the phosphotyrosine signaling
system, of which dock is a component, also play important
roles in axon guidance in the visual system (Garrity et al., 1996).
Targeting defects in these mutant backgrounds include irregular
and uneven lamina layer. In addition, R1–R6 axons that
normally synapse at the lamina can bypass the lamina and enter
the medulla or stop at the wrong points in the lamina or medulla
(Clandinin et al., 2001; Desai et al., 1999; Garrity et al., 1996).
Here, we show that Bifocal and PP1-87B are components of a
genetic axon guidance pathway in the visual system involving
the phosphatase receptors, Dptp69D and Dptp10D.
The Bifocal protein is expressed in neuronal cells in both the
embryonic nervous system and the larval visual system of the
fly (Bahri et al., 1997; Helps et al., 2001). Although Bif is
expressed on embryonic CNS axons, bif mutant embryos do
not show any obvious defects in axon guidance. However, Bif
has been shown to be required for the normal shape of the
R-cell rhabdomeres in the fly eye (Bahri et al., 1997) and for
anchoring of proteins to the posterior of the oocyte along with
the F-actin-binding protein, Homer (Babu et al., 2004).
In the visual system, we have previously shown that Bif is
one of the regulators of phosphatase activity, and it directly
interacts with PP1-87B via its consensus phosphatase-binding
motif, RVQF (Helps et al., 2001). We have also shown that the
Bif–PP1-87B complex is required for normal photoreceptor
rhabdomere morphogenesis (Helps et al., 2001). Furthermore,
Ruan et al. (2002) have shown that the loss of bif function can
give rise to axon guidance phenotypes in the larval optic lobe
and that in this system bif interacts with misshapen (msn), a
gene which encodes for a protein kinase that regulates normal
photoreceptor axon targeting (Ruan et al., 2002).
Although Bif has been shown to function in R-cell
guidance, several questions remained unanswered. For exam-
ples: (1) are the guidance defects an indirect consequence of a
lack of Bif function in rhabdomere morphogenesis? (2) Is
binding to PP1 essential for Bif’s axon guidance role? (3) Does
Bif form a complex with actin directly or indirectly? Here, we
demonstrate that the axon guidance defects in bif mutants are
not mere consequences of its effects on cell morphology. We
also show that the PP1-binding site of Bif is essential for its
function and that PP187B itself is also required for proper axon
guidance. We further demonstrate a dominant genetic interac-
tion between bif and PP1-87B, indicating that these two
molecules may function in the same signaling pathway during
normal photoreceptor axon targeting. Moreover, bif genetically
interacts with the receptor tyrosine phosphatases Dptp10D and
Dptp69D in the larval optic lobe, and it can directly bind to
F-actin, suggesting that Bif may contribute to the propagation
of signaling via these receptors to the actin cytoskeleton during
the process of axon guidance.
Materials and methods
Genetics
The protein phosphatase-1 mutants used in this study, pp1-87Bhs46,
pp1-87Be211 and pp1-87Be078, have been previously described by Axton et al.
(1990). We recombined the mutants onto an FRT chromosome and examined
the eye discs of transallelic larvae. These transallelic animals developed fairly
normal eye discs and were used for further examinations. The transgenic fly
lines carrying PP1 inhibitors and UAS-PP1-87B have been previously
described (Parker et al., 2002).
The bif mutants and bif transgenic lines, UAS-bif + and UAS-bif F995A, used
in this study were previously described by Bahri et al. (1997) and Helps et al.
(2001). The cDNA for the shorter Bif isoform called bif 10DA was cloned into
the pUAST vector, and fly transformants were generated using standard genetic
techniques. Ectopic expression of the various transgenes in the fly eye was
performed using GMR-GAL4 (Hay et al., 1997).
The Rotau-lacZ marker was used to mark R2R5 axons in the larval brain,
and the Rh1-slacZ and Rh4-slacZ markers were used for labeling R1–R6 and
R7 axons respectively in the adult brain (Garrity et al., 1999; Newsome et al.,
2000a). The dptp10d alleles, dptp10d1 and deletion Df(1)59 which deletes both
bif and dptp10d, were previously described (Bahri et al., 1997; Sun et al.,
2000). The dptp69d1 allele and a deletion uncovering dptp69d were obtained
from Bloomington Stock Center, and other mutant lines were obtained either
from Bloomington or as gifts from various laboratories.
Immunohistochemistry and microscopy
Larval eye discs/brain complexes were dissected and fixed in accordance
with previously published protocols with minor modifications (Wolff and
Ready, 1991). Wandering third-instar larval and 55 h pupal eye discs/brains
were dissected in phosphate-buffered saline and fixed in 4% paraformaldehyde
for 30 min on ice. The dissected brains or eye discs were washed, blocked with
BSA or goat serum and stained with primary antibody overnight. After several
washings, secondary antibodies were added, and the specimens were mounted
for microscopic observation. Several primary antibodies were used: rabbit anti-
PP1-87B (1:1500), sheep anti-Bif (1:1000), mAb 24B10 (1:3), rabbit anti-hGal(1:3000 from Cappel), mAb anti-Dac (1:500) or rabbit anti-Repo (1:500).
Either fluorescent-conjugated secondary antibodies (FITC 1:100 dilution or cy3
1:750 dilution) or peroxidase-conjugated secondary antibodies (from Jackson
laboratories used at 1:150 dilution) were used for signal detection. To enhance
the HRP signal in the adult brains, the Vectashield ABC kit was used.
Fluorescent-stained specimens were mounted in Vectashield and visualized
using confocal microscopy. F-actin was visualized with tetramethyl rhodamine
isothiocyanate–phalloidin (Sigma) or Alexa Fluor 546 Phalloidin (Molecular
Probes). Fluorescent signals were detected using confocal microscopy.
Transmission electron microscopy was used to visualize rhabdomeres of the
adult eye as previously described (Helps et al., 2001).
K. Babu et al. / Developmental Biology 288 (2005) 372–386374
Actin co-sedimentation assay
The actin co-sedimentation assay was performed as previously described
(Hohaus et al., 2002) with minor changes. Full-length and different deletions of bif
were cloned into the pGADT7 vector that was used to in vitro translate Bif products.
For making the constructs containing the N-terminal 500 amino acids of Bif, a 500
bp EcoRI/ClaI fragment was isolated from bif cDNA and inserted into the
pGADT7 vector. To make other constructs, different regions of bif were amplified
by PCR, and the PCR products were then digested with EcoRI/XhoI (these sites
were engineered in the PCR products) and cloned into the pGADT7 vector.
The actin co-sedimentation assay was performed using G-actin from Sigma.
The G-actin was allowed to polymerize using salt and ATP, and the in vitro
translated and radiolabeled polypeptides (Bif or luciferase control) were then
added to the polymerized F-actin or the control solution (buffer without F-actin)
and incubated for 60 min at room temperature. The mixtures were then spun at
100 K in an airfuge for 40 min, and both supernatants and pellets were then
boiled in 2� SDS buffer and run on an SDS-PAGE gel. In each experiment, the
samples were run onto two gels, one for autoradiography to detect the labeled
protein and another for Coomassie staining to detect the actin band.
Results
The role of Bif in axon guidance and rhabdomere shape can be
uncoupled
The involvement of Bif in axon guidance of R cells and its
expression and localization in the rhabdomeres and axonal
growth cones of these cells have been previously described
(Bahri et al., 1997; Ruan et al., 2002). The results of these studies
suggested a role for Bif in rhabdomere morphogenesis and a cell
autonomous requirement in the outer R cells for their axons to be
targeted to the lamina. In bif R47 (an antigen-minus allele)
animals, most R2–5 axons bypass the lamina and terminate in
the medulla, clumping of axons as well as breaks in the lamina
surface are visible in these mutants (Figs. 1A–D; Ruan et al.,
2002), but no gross abnormalities in the optic lobe can be
detected (Figs. 3E–J). However, it is not clear how the axonal
defects might relate to the morphogenesis defects in bif mutants.
To uncouple the function of Bif in axon guidance from its
function in rhabdomere morphogenesis, we made use of the two
protein isoforms of Bif that have been previously described (Bahri
et al., 1997;Helps et al., 2001). TheseBif isoforms are generated by
alternative splicing events, with the larger (1196 amino acids) bif +
isoform produced from five exons and the smaller (1063 amino
acids) bif 10Da isoform produced from six exons. We have shown
previously that the bif + isoform driven byGMR-GAL4 rescues the
rhabdomere as well as the actin localization defects associated with
the bif mutant discs (Helps et al., 2001). A similar rescue using the
Fig. 1. The R-cell axonal phenotype of bifocal mutant larvae and rescue experimen
stained with anti-chaoptin antibody 24B10; clumping of axons at the lamina and lam
optic lobe (A; inset in A is another control bif LH114 which does not delete into the
mutant optic lobes. Panels C (control Rotau-lacZ) and D (bif R47/bif R47; Rotau-lacZ
hgal staining; R2–R5 axons terminate at the lamina in the control optic lobe (C; arr
but most of the R2–R5 axons bypass the lamina and terminate at the medulla in the
100% of the mutant optic lobes (n = 17) with 65–75% of axons bypassing the lam
(78%, n = 36) showing rescue of the bif mutant axon clumping phenotype using UA
H are representative images of the majority of preparations (89%, n = 44) showing th
the axon clumping phenotype associated with the bif mutations (arrowheads in pa
phenotype of bif mutants is rescued by UAS-bif + (I) but not UAS-bif 10Da (J; arro
which detects the LacZ expression derived from the Rotau-lacZ marker. Scale bar
bif 10Da isoform of bif was also obtained (Figs. 2A, B, I, J and data
not shown), suggesting that either isoform is sufficient to produce
normal rhabdomere morphology. To ascertain whether these bif
isoforms rescue the axon guidance defects, GMR-GAL4, which is
expressed in all post-mitotic photoreceptor cells of the Drosophila
eye (Hay et al., 1997), was used to drive the expression of UAS-
bif + or UAS-bif 10Da transgenes specifically in the eye disc but not
the optic lobe in bifmutant backgrounds. In these experiments, only
bif + and not bif 10Da was able to rescue the axonal defects of bif
eyes (Figs. 1E, F, I, J). These data revealed differential requirements
for the two bif isoforms, with bif 10Da being largely required for
normal R-cell rhabdomere morphology but not having a predom-
inant role in normal axonal projections onto the optic lobe, while
bif + is involved in both R-cell morphology and axon guidance.
The uncoupling of Bif functions in axon guidance and rhabdomere
morphology also suggested that the axon guidance phenotype of bif
mutants is not merely a secondary effect of the R-cell morpholog-
ical abnormalities. Overexpression of bif 10Da in a wild type
background did not yield any obvious axonal phenotype as
observed with mAb24B10 staining; furthermore, the photoreceptor
rhabdomeres as observed under transmission electron microscopy
were largely normal in shape and organization (Supplementary Fig.
1). It was shown by Ruan et al. (2002) that Bif + overexpression
causes premature stop of the larval axons before they reach the
target lamina. We find that the overexpression of the Bif10Da
isoform does not cause such a premature stop phenotype, and
therefore it is unlikely that the lack of rescue of the bif bypass
phenotype is due to such an effect.
Adult brains of bif mutants were also examined by 24B10
staining (Figs. 2C, D) and markers specific for either R1–R6
projections (Rh1-slacZ; Figs. 2E, F) or R7 projections (Rh4-
slacZ; Figs. 2G, H). Surprisingly, the bif mutant adult brains
showed largely normal arrays of axons, even though the
rhabdomeres of the mutant adult retina have defective morphol-
ogy (Figs. 2A, B; Bahri et al., 1997), indicating that the axonal
phenotypes observed in the mutant larval optic lobe are largely
corrected in the mutant adult brain and further demonstrating
that the axon guidance phenotype and morphological defects of
R cells can be uncoupled in bif mutants.
The PP1-binding site in Bif is required for its function in
photoreceptor axon guidance
We have previously shown that Bif can associate with
PP1-87B in vivo and can directly bind and inhibit PP1-87B
ts. Panels A (control bif R47/+ or wt) and B (bif R47/bif R47) show optic lobes
inal breaks are visible in the mutant (arrowhead in B) as compared to the control
bif coding sequence). This phenotype was observed in 100% (n = 50) of the
) show targeting of the axons of photoreceptors R2–R5 as visualized with anti-
owhead; arrow in panel C shows the Bolwigs nerve which enters the medulla),
mutant (D; arrowhead). The R2–R5 axons bypass phenotype was observed in
ina. Panels E and G are representative images of the majority of preparations
S-bif + driven by GMR-GAL4 and visualized with 24B10 staining. Panels F and
at neither UAS-bif 10Da nor UAS-bif F995A expression under GMR-GAL4 rescues
nels F and H) as visualized with 24B10 staining. The R2–R5 axons bypass
whead) or UAS-bif F995A (K; arrowhead) as visualized with anti-hgal staining,is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386 375
activity in vitro. Bif contains a consensus four amino acid
PP1-binding motif, RVQF, towards the C-terminus. This
RVQF motif is present in both Bif + and Bif10Da isoforms
and spans amino acids 992–995. This motif is required for
Bif to bind PP1-87B in vitro and for bif function in vivo,
and a single amino acid mutation in this motif of Bif +,
Fig. 2. bif mutants show normal axon targeting in adult optic lobes. Panels A (wt) and B (bif R47/bif R47) are EM micrographs showing defective rhabdomeres shape
of bif mutants (B) as compared to wt ommatidia (A). Panels C–H show the optic lobes of WT (C, E and G) and bif mutant (D, F and H) adults stained with markers
for all or specific subsets of photoreceptor axons; no obvious defects are observed with 24B10 staining (D; bif mutants as compared to wt in C), with the Rh1-lacZ
R1–R6 axons marker (F; bif mutants as compared to wt in E) or with the Rh4-lacZ R7 axons marker (H; bif mutants as compared to wt in G). Panels I and J are EM
micrographs showing rescue of the adult rhabdomere phenotypes of bif mutants using either UAS-bif + (I) or UAS-bif 10Da (J); rescue of abnormal pattern of
rhabdomere arrangement was observed in 90% of ommatidia preparations (n = 30), and rescue of rhabdomere shape was observed in 81% of rhabdomeres (n = 210).
Compare the rescue images in panels I and J to the bif mutants in panel B and wt in panel A. Scale bar is 500 nm.
K. Babu et al. / Developmental Biology 288 (2005) 372–386376
Bif F995A, can abolish this interaction (Helps et al., 2001). In
addition, the mutant Bif F995A form cannot rescue the bif R-
cell morphological defects in vivo (Helps et al., 2001). To
test whether an intact PP1-binding site in Bif is also required
for axon guidance in the larval optic lobe, the mutant UAS-
bif F995A was driven by GMR-GAL4 in bif mutant back-
grounds (Figs. 1H, K). When compared with UAS-bif +, very
little rescue of the axonal defects was observed with this
mutant UAS-bif F995A construct as visualized with 24B10
(Figs. 1G–H) and the Rotau-lacZ marker (Figs. 1I, K). This
indicated that the PP1-binding site of Bif is essential for its
function in axon guidance, and it raised the possibility that
PP1 may also play a role in R-cell axon guidance (see
below). Consistent with this view, double heterozygous
larvae (bif/+; pp1-87B/+) showed clumping of axons at the
lamina as well as defects in axon targeting, with R2–5
Fig. 3. Genetic interaction between bif and pp1-87B and Dac and Repo staining in larval brains. Panels A–D show larval optic lobes stained with 24B10 (A, B) or
anti-hgal (C, D). Panels A and C are representative images showing the normal 24B10 staining pattern (A) and the normal R2–R5 axonal pattern (C; as visualized
with the Rotau-lacZ marker) observed in either bif R47/+ or pp1-87B/+ heterozygotes. Transheterozygous bif/+; pp1-87B/+ animals show axon clumping in the
lamina as visualized with 24B10 (B, arrow; phenotype observed in 91.67% of brains, n = 36) and mistargeting of axons to the medulla as visualized with the Rotau-
lacZ marker (D, arrow; phenotype observed in 27–30% of axons, n = 5) is mistargeted into the medulla. Panels E–J are confocal images of anti-Dac (red) and anti-
Repo (green) stainings in wt (E–G) and bif R47 mutant (H–J) optic lobes; no obvious defects are observed with either Dac or Repo staining in bif mutants as
compared to wt. Panels G and J are merged images of panels E and F and H and I respectively. Scale bar is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386 377
Fig. 4. Inhibition of PP1 activity causes axonal targeting defects in the larval eye disc. Overexpression of the NIPP1 (A) or the I-2PP1 (B) inhibitors by GMR-GAL4
causes no obvious abnormality in photoreceptor formation as can be visualized with mAb 22C10, but staining with mAb 24B10 reveals laminal breaks and clumping
of axons (C, NIPP1; D, I-2PP1); the axon phenotype caused by NIPP1 overexpression was observed in 100% (n = 20) of preparations, while, for the weaker I-2PP1
inhibitor,¨67% (n = 15) showed the phenotype. Using the Rotau-lacZ axonal marker, a severe defect in R2–R5 targeting is observed with NIPP1 overexpression (E;
¨55% of the axons are mistargeted to the medulla, and this phenotype is observed in 100% of optic lobes, n = 16), and a relatively milder phenotype is observed
with I-2PP1 overexpression (F; ¨5% of the axons are mistargeted to the medulla, and this phenotype is observed in 61% of optic lobes, n = 18). Scale bar is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386378
axons bypassing the lamina and entering the medulla in
these optic lobes (Figs. 3C, D), whereas neither bif nor pp1-
87B single heterozygotes show a phenotype with 24B10 or
the Rotau-lacZ marker (Figs. 3A, B; data not shown). These
data further support the view that Bif and PP1 act together
for normal photoreceptor axon targeting in the larval optic
lobe.
Fig. 5. Axonal defects in pp1 mutants. Two alleles of pp1 (pp1e211 and pp1e078) wer
pp1e078/+ (A; control) and the transheterozygotes pp1e078/pp1hs46 or pp1e211/p
transheterozygous combinations show an uneven lamina as visualized with mAb 24
phenotype (97.2%; n = 36) than pp1e211/pp1hs46 (C). Using the Rotau-lacZ mark
mistargeted into the medulla (panel E is pp1e211/pp1hs46 with 91.6% of preps, n =
showing the phenotype). Panel G is a larval brain overexpressing PP1-87B and show
observed in 100% of optic lobes, n = 28); overexpression of PP1 also gives rise t
phenotype (panel I is a representative image, with 30–35% of the axons bypass the l
defects (panel J is a representative image, with more than 70% of the axons entering t
of R2–R5 axons to the lamina as visualized with the Rotau-lacZ marker. Scale bar
Overexpression of PP1-87B in the eye causes axon guidance
defects
Since Bif can inhibit the activity of PP1 (Helps et al., 2001),
we wondered whether PP1-87B overexpression in wild type
backgrounds might mimic the effects of bif loss-of-function on
axon guidance. To test this, a UAS-PP1-87B construct was
e studied in trans with the strong allele of pp1, pp1hs46. The larval eye discs of
p1hs46 (B) do not show any obvious defects with 22C10 staining. Both
B10 staining with the pp1e078/pp1hs46 (D; arrowhead) showing a more severe
er, both pp1 transheterozygous combinations show ¨50% of R2–R5 axons
24, showing the phenotype; F is pp1e078/pp1hs46 with 100% of preps, n = 17,
ing an uneven lamina (arrowhead) as visualized with 24B10 (this phenotype is
o mistargeted R2–R5 axons with the majority of preps showing mild bypass
amina into the medulla) and the remainder of the preps showing severe targeting
he medulla). Panel H is a control pp1e078/+ optic lobe showing normal targeting
is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386 379
driven withGMR-GAL4 in the eye disc, and the optic lobes from
these animals were stained with 24B10. Axonal breaks in the
lamina similar to those observed in bif mutants were observed
(Fig. 5G). The R2–R5 axon-specific marker also showed
mistargeting of these axons into the medulla (Figs. 5I, J).
Inhibition of PP1 activity or mutations in PP1 cause R-cell
axon targeting defects
We wanted to determine whether PP1-87B mutants
themselves exhibit any axonal phenotype in the eye, but it
K. Babu et al. / Developmental Biology 288 (2005) 372–386380
was not possible to use homozygotes of the available strong
PP1-87B mutant alleles as this gene is required for normal
cell cycle progression in larval brain neuroblasts and in the
eye imaginal disc; hence, most PP1-87B mutants die at
larval or early pupal stages (Axton et al., 1990). More
importantly, these mutants have severely deformed small eye
discs due to cell division defects, making the defective
axonal projections they exhibit difficult to interpret (data not
shown). As a first step in determining PP1 function in axon
guidance, specific PP1 inhibitors, NIPP1 (Bennett et al.,
2003; Beullens et al., 1992; Parker et al., 2002; Van Eynde
et al., 1995) and I-2PP1 (Bennett et al., 1999, 2003; Helps
and Cohen, 1999; Huang and Glinsmann, 1976; reviewed in
Cohen, 2002), were driven post-mitotically in the eye disc
using pGMR-GAL4. The rationale being that by inhibiting
PP1 activity in post-mitotic cells the problems associated
with cell cycle progression should be circumvented, making
it possible to examine the effects of PP1 loss on axonal
targeting. PP1 has been shown to associate with endogenous
inhibitors, such as Inhibitor 2 (I-2) and Nuclear Inhibitor of
PP1 (NIPP1), which may help to prevent inappropriate
dephosphorylation of nonphysiological targets. It has also
been shown that ectopic expression of the inhibitors
specifically reduces PP1 activity in vivo and results in
phenotypes resembling those of PP1c mutants (Bennett et
al., 2003). Upon overexpression of the inhibitors under
GMR-GAL4, the eye disc morphology appeared essentially
normal, but the photoreceptor axons showed defects (Figs.
4A–D). The lamina formed by the axons expressing either
NIPP1 (Fig. 4C) or I-2PP1 (Fig. 4D) was discontinuous
with breaks, and the R2–R5-specific Rotau-lacZ marker
showed axon mistargeting to the medulla mainly with the
stronger NIPP1 inhibitor (Fig. 4E); the weaker I-2PP1
inhibitor showed mild or no mistargeting defect in the optic
lobes as visualized with the R2–R5-specific marker (Fig.
4F). These results suggest that PP1 activity is required for
photoreceptor axon guidance in the fly visual system.
Since NIPP1 and I-2PP1 are general PP1 inhibitors and
not specific for PP1-87B, we next used different allelic
combinations to bypass the early cell cycle defects
associated with the pp1-87B mutations. Three alleles of
pp1-87B, pp1e211, pp1e078 and pp1hs46 (Axton et al., 1990)
were used to examine the pp1-87B phenotype in the eye
disc. Using the strong pp1hs46 allele in trans with the other
2 weaker alleles allowed larval development to proceed; in
these particular transheterozygous combinations, the larval
eye discs formed fairly normally as can be visualized with
22C10 (Figs. 5A, B), presumably because there is sufficient
residual PP1 activity to enable cell divisions to occur at a
near normal level. Staining of the pp1 transheterozygotes
with 24B10 showed axons clumping at the lamina and
laminal breaks (Figs. 5C, D), and some of the R2–R5 axons
in these animals were also mistargeted to the medulla (Figs.
5E, F). Taken together, the axonal defects in the PP1-87B
mutant combinations in which cell cycle defects appear to
be minimal further strengthen the view that PP1-87B is
required for normal photoreceptor axon guidance.
Like Bif, PP1-87B is expressed in R-cell axons and in the optic
lobe
Bif expression and localization in the rhabdomeres and
axonal growth cones have been previously described (Bahri et
al., 1997; Ruan et al., 2002). However, a close examination of
Bif staining revealed widespread expression in the optic lobe
(Figs. 6, 7) which was not previously reported. Double labeling
with anti-Bif and anti-Dachshund (Garrity et al., 1999; Mardon
et al., 1994) showed that Bif localizes in the outer region of the
lamina (Figs. 6A–C), where the photoreceptor axons initially
send their projections into the optic lobe (Kunes et al., 1993).
Bif also showed co-localization with F-actin in the optic lobe
(Figs. 6J–L), similar to what has been reported in the eye disc
(Bahri et al., 1997). In these experiments, Bif staining was
stronger in the optic lobe cortex and weaker in the cortical
axons (Figs. 6M–O). Bifocal staining was weak/absent in the
eye disc and optic lobe of bif R47 mutants (Figs. 6P–R),
indicating that anti-Bif staining in these tissues is specific. On
the other hand, F-actin staining was still visible in these
mutants. Although Bif is expressed in the optic lobe, no
obvious defects were detected in bif mutants with either
Dachshund (Mardon et al., 1994), which marks the proliferat-
ing cells of the lamina, or with Reversed polarity (Halter et al.,
1995), which marks the glia (Figs. 3E–J). This indicated that
the formation of the lamina and glia appears normal in bif
mutants.
Double labeling with anti-Bif and anti PP1-87B antibodies
of wild type preparations indicated that both proteins have
overlapping expression patterns in most regions of the optic
lobe (Figs. 7A–C). Similar to the staining pattern of Bif, anti-
PP1-87B staining in the brain also showed enhanced signals in
the brain cortex and the outer layer of the lamina, while it was
considerably weaker in the axons. In addition, double staining
with Bif and PP1-87B or Bif and phalloidin showed that both
Bif and PP1-87B are expressed in the axons of the optic lobe
(Figs. 7D–I). These experiments indicated that, like Bif, PP1-
87B is expressed in R-cell axons consistent with a role in
targeting of these axons. It should be noted here that the
possibility of the PP1-87B antibody cross-reacting with any of
the other 3 isoforms of PP1 present in Drosophila cannot be
excluded. We carried out staining on pp1 mutants and found
that the mutants still show positive staining; this is most
probably due to the fact that the tissues retain residual PP1-87B
activity because the transheterozygous combination we used to
circumvent cell division defects associated with loss of PP1-
87B is not null for PP1-87B. We therefore cannot rule out the
possibility of cross-reaction of the PP1-87B antibody we used
with different PP1 isoforms.
Bif interacts genetically with receptor tyrosine phosphatases
and can directly bind F-actin
The interaction of Bif with intracellular signaling molecules
like misshapen (Ruan et al., 2002) and PP1 (this work) seems
to be important for normal R-cells axon guidance. In order to
identify additional, more upstream, components, which interact
Fig. 6. Bif expression pattern in the optic lobe. Panels A–O are confocal images of wt third-instar larval optic lobes stained with anti-Bif (green) and various other
markers. Double labeling with anti-Dac (A–C; red) shows Bif expression in the cortex of the optic lobe, and a high level of expression is seen on the outermost
region of the lamina (arrowhead in panel A, merged panel C) where Dac is expressed (B). Double labeling with 24B10 (D–I) shows a high level of Bif expression in
the axons that pass through the optic stalk (arrowhead in D, merged panel F); Bif expression in the axons when they enter the optic lobe becomes reduced when
compared to its expression in the optic stalk (D and G), whereas 24B10 staining is still seen at high levels in the optic lobe axons (H and merged panel I). Double
labeling with phalloidin (J–O) shows high expression for Bif (J) and co-localization with F-actin (K, merged panel L) in the cortex. Expression of Bif in a deeper
plane of focus (M and merged image O) in the optic lobe is less than in the cortex (compare M to J). No expression of Bif is seen in bifR47 mutant optic lobes (P),
while phalloidin staining is still seen in these mutants (Q). Panel R is a merged image of panels P and Q. Scale bar is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386 381
with bif, genetic interaction experiments between bif and other
molecules involved in photoreceptor axon guidance were
performed. bif R47/+ individuals are wild type (Fig. 3A) as
are dptp69d/+ or dptp10d/+ (Fig. 8A; data not shown),
however, axonal defects were observed in double transheter-
ozygous optic lobes of bif/dptp10d and bif/+; dptp69d/+
combinations (Figs. 8D, E). This phenotype was also seen in
optic lobes from females heterozygous for a deletion removing
bif and dptp10d (Fig. 8F). There was no phenotype in double
heterozygotes of bif R47 with dock, pak, dlar, ena or abl (Fig.
8B; data not shown). These genetic interaction experiments
suggested that bif preferentially interacts with the upstream
dptp10d and dtptp69d and that bif might be a component of
axon guidance pathways involving these signaling receptors.
We have used the Rotau-lacZ axonal marker on the bif/+,
dptp69d/+ and bif/dptp10d/+ double heterozygotes, but we did
not detect any mistargeting phenotype. This may indicate that
Bif does not cooperate with the receptors to influence the ‘‘stop
decision’’ of growth cones at the lamina. However, our results
with 24B10 staining showed uneven lamina only with the bif
mutant in combination with the 10D and 69D mutants, but we
did not see a similar effect on the lamina when we used genetic
Fig. 7. Bifocal and PP1 are expressed in axons. Panels A–C show co-expression of Bif (A, green) and PP1 (B, red) in the wt optic lobe; panel C is a merged image of
panels A and B. Panels D–F show double labeling of Anti-Bif (D, green) and phalloidin (E, red) in wt optic lobes; note that Bif is expressed in the axons in a manner
similar to F-actin; the arrow in panel E indicates axons stained with phalloidin, and panel F is a merged image of panels D and E. Panels G–I show double staining of
wt optic lobes with phalloidin (G, red) and anti-PP1 (H, green); note PP1 staining in axons (H, arrows). Scale bar is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386382
combinations between bif and several other mutants including
dpak, dock, dlar, ena and abl. Hence, we have concluded that
bif genetically interacts with the receptor phosphatases.
It has previously been shown that Bif from embryonic fly
extracts can be pulled down using F-actin columns (Sisson et
al., 2000), indicating that Bif may be a component of an actin-
associated complex of proteins in vivo. However, the mode of
interaction between Bif and F-actin is not clear since Bif does
not have any obvious actin-binding domains (Bahri et al.,
1997). In order to determine whether the interaction of Bif with
F-actin is direct, a co-sedimentation assay was performed using
F-actin and in vitro translated Bif. In this experiment, Bif was
pulled down by F-actin, indicating that Bif and F-actin can bind
directly to each other (Fig. 9A). Further dissection of the Bif
protein mapped the F-actin-binding domain to 2 novel regions
in the last 400 amino acids of the Bif + protein (schematic in
Fig. 9B). Only one of these domains is shared by both Bif + and
Bif10Da isoforms, while the other actin-binding domain is
specific to Bif + (Fig. 9B). These experiments indicated that
Bif/F-actin complexes may form through direct binding and
that Bif may link various axon guidance signaling pathways to
the actin cytoskeleton.
Discussion
Bifocal is a protein required for normal photoreceptor
rhabdomere morphology in Drosophila (Bahri et al., 1997),
and, in this process, it functions together with PP1 (Helps et al.,
2001). Bif is also a target of the Ser/Thr kinase Misshapen, and,
together, these molecules regulate photoreceptor axon guidance
and targeting during the larval stages (Ruan et al., 2002). In this
report, we have shown that Bif function in R-cell axons can be
uncoupled from its function in maintaining R-cell shape and
morphology and that the PP1-binding site in Bif is required for
its function in axon guidance. In addition, we have shown that
the Bif-interacting partner, PP1-87B, is required for axon
guidance in the visual system and that Bif is likely to function
as a downstream component of signaling pathway(s) that
involves the receptor tyrosine phosphatases, Dptp10D and
Dptp69D. Finally, we have shown that Bif can directly bind F-
actin and thus might provide a link between axon guidance
pathways and the underlying actin cytoskeleton.
The rescue experiments utilizing the two different isoforms of
bif demonstrate that the function of Bif in photoreceptor axon
guidance can be uncoupled from its function in rhabdomere
Fig. 8. Genetic interaction between bif and receptor tyrosine phosphatases. The receptor tyrosine phosphatases dptp69d and dptp10d genetically interact with bif.
Control optic lobes from ptp10d/+ (A) and ptp69d/+ (C) do not show any defects when stained with mAb 24B10. Panel B is a bif/+; pak/+ optic lobe showing
normal axonal pattern as visualized with 24B10 staining. Staining of bif/+; ptp69d/+ optic lobes with mAb 24B10 shows clumps and breaks in the lamina (D,
arrowhead; 84% or preps show a phenotype, n = 37). A similar phenotype is seen when one copy of bif and one copy of ptp10d are simultaneously removed (E,
arrowhead; 85% of preps show a phenotype, n = 34) or in animals heterozygous for a small deletion that removes both bif and ptp10d (F, arrowhead; 89% of preps
show a phenotype, n = 38). Scale bar is 20 Am.
K. Babu et al. / Developmental Biology 288 (2005) 372–386 383
morphology in photoreceptor cells, and this indicates that Bif
has a dual role in the fly visual system, normal axon connectivity
in the larval stages and the formation of normal rhabdomeres in
the adult eye. It should however be noted that the rhabdomere
rescue obtained using both the bif + and the bif10Da isoforms of
bif was not complete, possibly because the expression pattern
and/or level of Bif expression in the rescue experiments are
somehow different from the wild type expression of Bif. The
larger Bif + isoform is 1196 amino acids long, whereas the
shorter Bif 10DA isoform is 1063 and is formed by an alternative
splice site between exon 4 and 5. It is somewhat surprising to
find that the two isoforms of Bif behave differently with respect
to axon guidance since both isoforms contain the PP1 and actin-
binding sites (see Fig. 9). One possible explanation is that the
additional C-terminal sequences present in Bif + are required for
its function in axon guidance. Interestingly, this region
comprises one of the actin-binding domains. The precise role
of these sequences in vivo is not clear at present, but it is possible
to envisage roles for them in protein folding or mediating
binding to other partners. In this regard, one plausible scenario is
that the two Bif isoforms may assume distinct patterns of
subcellular localization due to their different C-termini. It is
possible for future approaches to address this question by
generating specific antibodies that recognize the different
isoforms of Bif or expressing tagged versions of the two Bif
products.
Mutations in the conserved phosphatase-binding motif of
Bif, which abolish binding of Bif to PP1-87B, render the
protein less effective in axon guidance. We have previously
reported similar effects on Bif activity for these mutations in
Fig. 9. Bif binding to F-actin in vitro. Panel A shows a series of gels from co-
sedimentation assays of F-actin with the various radiolabeled Bif + products; the
supernatant fractions in the presence (+As) or absence (�As) of F-actin and the
pellet fractions in the presence (+Ap) or absence (�Ap) of F-actin are indicated
on top. The first row is co-sedimentation of an in vitro translated luciferase
control showing the labeled luciferase remains in the supernatant (+As), and it
does not pellet by F-actin (+Ap). The second row is co-sedimentation of an in
vitro translated full-length Bif + (FL Bif) showing the labeled Bif + protein
precipitated with the F-actin pellet (+Ap); the Bif + band is absent from the pellet
fraction in the absence of F-actin (�Ap). The third row is co-sedimentation of an
in vitro translated N-terminal aa500 of Bif + (N-ter Bif); this N-terminal product
is not pelleted by F-actin (+Ap). The fourth row is co-sedimentation of an in
vitro translated C-terminal aa396 of Bif + (C-ter Bif); the C-terminal product is
pelleted by F-actin (+Ap); The last row is a control gel stained with Commassie
blue to show the F-actin band. Panel B shows schematic diagrams of the two Bif
isoforms, Bif + and Bif 10Da, and the various protein regions used in the F-actin
co-sedimentation assays; (+) indicates binding to F-actin and (�) indicates lack
of binding to F-actin. The first aa1000 are common between Bif + and Bif 10Da,
but the two protein isoforms differ in their C-termini; two broad domains of Bif +
spanning aa800–950 and aa1000–1196 (in red) bind actin, while Bif 10Da
contains only the aa800–950 actin-binding domain; the last aa63 of Bif 10Da
(which are not found in Bif +) do not bind F-actin. The RVQF PP1-binding motif
in Bif + and Bif 10Da is indicated by an arrow.
K. Babu et al. / Developmental Biology 288 (2005) 372–386384
the morphogenesis of rhabdomeres (Helps et al., 2001).
Another interesting aspect is that Bif can form a complex with
the cytoskeletal F-actin both in vivo and in vitro (Sisson et al.,
2000; this work). Changes in the actin cytoskeleton are known
to be essential for remodeling of the axon growth cone. These
data suggest that, in addition to its inhibitory regulatory effect
on the phosphatase activity, Bif might serve as a direct link
between PP1-87B and the actin cytoskeleton. Similar observa-
tions were reported for neurabins, which are the inhibitors of
PP1 in mammals. It has been shown that neurabins bind actin
and serve as linkers between the actin cytoskeleton and the
plasma membrane at the cadherin-based cell–cell adhesion
sites. Neurabin I is highly concentrated at the synapse of
developed neurons and in the lamellapodia of growth cones
during the development of neurons, suggesting that it could be
required for synapse formation or function (MacMillan et al.,
1999; McAvoy et al., 1999; Oliver et al., 2002; Terry-Lorenzo
et al., 2002). Although it does not share any sequence
homology with mammalian neurabins, Bif could be a
functional homologue of neurabins in the Drosophila larval
visual system by associating with PP1-87B and the actin
cytoskeleton. Such functions of Bif might consequently affect
the phosphorylation status of various actin-binding proteins
like myosin II (reviewed by Tan et al., 1992) and cofilin
(reviewed by Lawler, 1999), which are known to undergo
phosphorylation and dephosphorylation.
A role for PP1 itself in axonal connectivity in the larval optic
lobe is supported by two observations: firstly, expressing PP1
inhibitors in post-mitotic cells in the eye imaginal disc results in
axon defects; secondly, transallelic combinations of pp1-87B
mutants, which are able to bypass the earlier defects of cell cycle
arrest that are usually seen in homozygotes of strong pp1-87B
mutants, reveal axon targeting defects in the larval lamina.
Although the PP1 inhibitors are not specific to PP1-87B, they
nevertheless do support the notion that the phosphatase activity
of PP1 is required for proper axon guidance. In the transallelic
combinations of pp1 mutations, formation of the R cells of the
larval eye disc is not adversely affected, suggesting that the axon
guidance phenotype of pp1-87B mutants is not simply due to the
lack of cells in the developing eye disc. Interestingly, both pp1-
87B mutants as well as PP1 overexpression give rise to axons
bypassing the lamina and entering the medulla of the optic lobe.
This suggests that an optimal level of PP1 activity in the eye disc
and optic lobemay be required, and either increase or decrease of
PP1 levels could lead to changes in the phosphorylation status of
target proteins and subsequent defects in the growth cone
cytoskeleton and axon guidance.
PP1 is one of the most abundant eukaryotic protein
phosphatases that dephosphorylate serine and threonine residues
of target proteins. The activities of various PP1 catalytic (PP1c)
subunits are extensively regulated in various organisms and
tissue types within a single organism. PP1c binds various
regulatory molecules, which could bring the phosphatase to its
site of action (reviewed by (Cohen, 2002) or act as adaptors for
the phosphatase at its site of function. There are 4 related PP1c
subunits in Drosophila (Dombradi et al., 1990b, 1993).
Drosophila PP1s are very similar proteins encoded by different
loci in the fly genome, and they are variably regulated at
different points in development (Alphey et al., 1997; Asztalos et
al., 1993; Axton et al., 1990; Baksa et al., 1993; Bennett et al.,
1999; Carvalho et al., 2001; Dombradi and Cohen, 1992;
Dombradi et al., 1990a,b, 1993; Helps et al., 1998, 2001;
Raghavan et al., 2000; reviewed by Cohen, 2002). It is
conceivable that Bif acts as one of the regulatory subunits of
PP1 in the fly eye, and it is required either as a complex with PP1
and the actin cytoskeleton or for recruiting PP1 to subcellular
sites where the PP1 activity is required to modulate the actin
cytoskeleton. The former hypothesis seems more plausible as bif
mutant larval and pupal eye discs do not show any obvious
changes in PP1 staining (our unpublished data).
K. Babu et al. / Developmental Biology 288 (2005) 372–386 385
Based on the genetic interactions of bif and the receptor tyrosine
phosphatase genes,Dptp10D andDptp69D, and on the data of Bif
functional and biochemical interactions with PP1-87B and F-actin,
a possible model for Bif function in axon guidance could be put
forward: activation of receptor molecules leads to signaling events
(perhaps also involving misshapen) that activate Bif in the growth
conewhich in turn leads to inhibition of PP1 activity and changes in
the actin cytoskeleton to support axon outgrowth and guidance. In
this scenario, PP1 must have a threshold level of activity as
decreased levels of PP1-87B and general inhibition of PP1 activity
also cause axon guidance defects. Bif might participate in lowering
PP1 activity to the threshold level but must not abolish all PP1
activity in order to allow normal photoreceptor axon guidance.
Interestingly, overexpression of Bif as four copies has been shown
to induce axonal targeting defects (Ruan et al., 2002).
Finally, bif mutants affect axon targeting in the larval optic
lobe, but these defects seem to be corrected in the adult. How
this axon defect is rectified in the adult stages remains unclear,
and it probably occurs during the extensive remodeling that
takes place during the pupal stages of fly development. In
future studies, it would be interesting to determine if any of the
other molecules involved in Drosophila photoreceptor axon
guidance behave in a similar manner, and it would perhaps also
be informative to classify phenotypes into those that can be
repaired and those which cannot.
Acknowledgments
We thank the following people for providing flystocks,
antibodies and other reagents: Barry Dickson, David Van Vactor,
Graeme Marden, Larry Zipursky, Kai Zinn, Yang Rao, Nick
Harden, Nick Helps, Tricia Cohen andUlrike Heberlein.We also
thank the Bloomington stock center for providing fly stocks. Our
special thanks to Richard Tuxworth for help with the image
collection, Rachna Kaushik for critical comments on the
manuscript and the other laboratory members for discussion
and help. The Wellcome Trust UK, Temasek Life Science
Laboratory (W. Chia and K. Babu) and Institute of Molecular
and Cell Biology (S. Bahri) for financial support. This work was
supported in part by a Wellcome Trust Principal Research
Fellowship and Programme Grant to WC.
Appendix A. Supplementary data
Supplementary data associated with this article can be found
in the online version at doi:10.1016/j.ydbio.2005.09.017.
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