annual conference - · pdf filecro: use their db specification, needed to convince to use ours...
TRANSCRIPT
SCDM 2017ANNUAL CONFERENCE
September 24-27 I Orlando
CDASH Metadata Builds with Multiple CRO / EDC Vendors - Efficient SDTM datasetsFred D. Bermont
v
Agenda
v
•Development of CDASH Metadata Standards using ODM
•Aligning with SDTM
•Process of Developing Study specific CDASH Metadata using
Standards
•Exporting ODM with XML extensions to load into Various EDC
systems
•Different Vendors / CROs
•What We Learned
Disclaimer
The views and opinions expressed in this presentation and on the following slides are solely those of the presenter and not necessarily those of Shire.
v
A Need
Expanding Clinical Portfolio and Employee Base
Standards and Governance Structure
CDASH Standards
SDTMIG 3.1.2
SDTMIG 3.2
• Reduce Database Development
• 10-16 Weeks
• 6-8 Weeks
Expectation FDA would Mandate the Use of CDISC Standards in the Near Future
v
A Want
Unique standards reviewed (and approved)
by Governance
Ensure all the unique forms were developed and were unlikely to
change
Meet internally with MDs and SMEs to ensure the
proper information
Develop SDTM Mappings for both Standard and Study specific forms
Deliver Standards
Quickly
Deliver As Much In-house As Possible Prior To DB Production
How This Was Done-3 Parts-
v
Part 1:Development of CDASH standards
Metadata
•Commonly Used
•CDASH 1.1
•16 Domains
•Company Defined Needs
Set Up
•“SuperSet”
•No Forms
•Stored in ODM.XML format
•Subset for study
Visualizations
•Human readable
•DB Design Spec
•Subset Spreadsheet
Vendor Agnostic Specification
• How we developed our Standard Metadata– View from a Specification
ODM Version
• The backbone that runs this is ODM
Part 2:Using Standards in Study Development
• Standards Specialist would sit in with a Study Team during Study Development• Study Database build started once protocol was in final draft• Subset document
• Work with the Data Manager to implement the Standards that have been approved (Vitals/Lab/Demographics etc.)
• Study Specific Forms would be spec’d out with Standards in mind• Developed using CDASH “Model”
• Findings Domain• Event Domain• Intervention Domains
Data Manager uses Subset document to Specify Items from Standard Domains
Standards and DM meet with Study team to Define
Study Specific Forms
Standards Develops Study specific Forms with CDASH Model
Study Team Approves all
Unique Forms
Standards extends ODM for delivery
into EDC system via plug-ins
Delivery
12
CRF Questions would be developed with Medical Monitor/Study Team
• Many Rare Disease concepts were "new". As a result questions were usually being asked for the first time
• Standards specialist “map to SDTM”• Annotations were created to facilitate
early review
Once all Unique CRFs were finalized, Standards Specialist and Study Team Clinical Biostats Programmer, would meet to review SDTM.
CDASH used, therefore ease of use to map raw data into
SDTM
Part 2: Using Standards in Study Development Continued
Part 3 - Delivery
RAVE
InForm
DataLabs
Vendor Agnostic
Specification
Vendor Confirms Upload
Vendor Develops from EDC Agnostic
Specification
Vendor gets study ready
for production
ODM-XML Stored
Extend usingFormedix Study Modeller
Plugs ins “transform” ODM to EDC uploads
v
Part 3 – Delivery / Handoff
Source Data Verification
Univariate Edit Checks
Welcome and Save
Confirmation
Multiple EDC Specification
Company Specific QC Validations
As we got used to this process more and more metadata was added to the library to allow for
quicker Database Development
v
What we Learned / Challenges
For the identified business needs at the time this process was highly successful.
• Reduced database development time from 10-16 to 6-8 with a couple studies hitting the 6 week or less.
• Cost of Database development went down 10%
• Quicker Database Development with less cost
Figured we could do 10-12 Databases a Year using this process with 1.25 FT resources.
We were able to do more Study Builds using this method than the previous method without Standards
Resistance: Not comfortable working with Superset, wanted Forms Library
CRO: Use their DB Specification, needed to convince to use ours
Metadata Library: Set up using Superset as to not overburden current staff.
v
What we Learned
By using CDASH Metadata, the Biostats programming team could set up macros and other programming methods to develop SDTM datasets.
Using CDASH allowed for direct mapping in some cases to SDTM variables
Our standards were used 78% of the time which had major downstream effect
Able to leverage study specific forms for future study use
• Cut SDTM mapping time as most items were mapped up front.