the of vol. no. 6, pp. chemistry in q 1989 for inc purification … · 2001-07-18 · the journal...

THE JOURNAL OF BIOLOGICAL CHEMISTRY Q 1989 by The American Society for Biochemistry and Molecular Biology, Inc

Vol. 264, No. 6, Issue of February 25, pP. 3325-3334.1989 Printed in U.S.A.

Purification and Substrate Specificity of a Strongly Hydrophobic Extracellular Metalloendopeptidase (“Gelatinase”) from Streptococcus fuecalis (Strain OGl-IO)*

(Received for publication, March 4, 1988)

Pirkko-Liisa Makinen, Don B. Clewell, Florence An, and Kauko K. Maklnenf From the Department of Oral Biology, School of Dentistry, the Department of Microbiology/Imrnunology, School of Medicine, and the Dental Research Institute, University of Michigan, Ann Arbor, Michigan 48109-1078

An extracellular Zn-endopeptidase was purified to homogeneity from the culture filtrates of Streptococ- cus faecalis (human oral strain OG1-10) by a procedure that comprised concentration in an Amicon Hollow Fiber System, ammonium sulfate precipitation, gel permeation chromatography, hydrophobic interaction chromatography (batch operation on phenyl-sepharose C1-4B), followed by fast protein liquid chromatography (FPLC) on a phenyl-Superose HR 5/5 column, and finally FPLC on a Superose 12 HR 10/30 column. The enzyme is a 31.5-kDa strongly hydrophobic protein with an isoelectric point of 4.6 and a broad pH optimum of 6 to 8. The substrate specificity of the enzyme is similar to that of the mammalian membrane endopeptidase-24.11 and Streptococcus thermophilus thermolysin (EC 3.4.24.4) in hydrolyzing preferentially the Phe24-Phe26 bond in insulin B-chain, followed by cleavage of the HisS-Leu‘ bond. The enzyme was especially active on Azocoll and gelatin; soluble and insoluble collagens were hydrolyzed at a lower rate. s. faecalis sex pheromone-related peptides and several mammalian bioactive peptides were cleaved at sites involving pronounced hydrophobicity. The enzyme did not hydrolyze small synthetic peptide derivatives (phenylazobenzyloxycarbonyl-L-Pro-L-Leu-Gly-L- Pro-D-Arg and 2-furylacryloyl-~-Leu-Gly-~-Ala) that are typically attacked by “true” bacterial collagenases. Chemical modification indicated the importance of his- tidyl, carboxyl, and tyrosyl groups in enzyme activity, suggesting that this enzyme may thus be classified as a metalloprotease 11 (EC 3.4.24.4). The enzyme is strongly inhibited by a 720-kDa factor present in rat inflammatory exudate, The pronounced ability of the enzyme to attack collagenous materials and certain bioactive peptides suggests its participation in inflammatory processes involving the presence of S. faecalis.

Streptococcus fuecalis is frequently identified as the etiolog- ical agent of such opportunistic infections as soft tissue and urinary tract infections, intraabdominal abscesses, and root canal infections (1-5). Furthermore, group D streptococci have been found to be the causative agents in 10 to 20% of bacterial endocarditis cases (6), with the primary offending species being S. fuecalis (7) . Secondary bacteremia frequently

* This study was supported by National Institute of Dental Re- search Grant DE02731 and the Finnsugar Research Foundation, Helsinki, Finland. The costs of publication of this article were de- frayed in part by the payment of page charges. This article must therefore be hereby marked “advertisement” in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

$ To whom correspondence should be addressed.

results from S. fuecalis soft tissue and urinary tract infection (8), and it is the most common Gram-positive organism identified in cases of polymicrobial bacteremia (9). The relationship of proteolytic enterococci to food poisoning and certain related disease conditions has also received attention in the past (10). Clinical isolates of S. faeculis are frequently resistant to antibiotics, a characteristic usually determined by plasmids or conjugative transposons (11). Finally, enterococci have been observed as prominent members of the flora in the advancing front of human dentine caries (12). A S. faeculis- like strain in combination with a proteolytic bacillus was cariogenic in rats (13). Gold et al. (14) found that the gelatin- liquefying human strain 2SaR of s. faecalis induced caries, whereas non-proteolytic enterococci did not. These clinical findings suggest that the proteolytic strains of S. faeculis may display primary or secondary (proteolytic) aggressiveness in some clinical situations. Some strains of S. faecalis produce a hemolysin-bacteriocin (15), a trait which has been shown to contribute to virulence in a mouse model (16). Production of hemolysin has also recently been found to be common in a human isolate associated with parenteral infections (17).

The focusing of attention on hemolysin-bacteriocin production as contributing to aggressiveness of S. fuecalis has perhaps ignored the possibility that extracellular proteinases produced by some of these organisms also contribute to virulence. Purification and properties of a 28- to 32-kDa-metal- loproteinase from S. faecalis var. liquefaciens were reported (18-21) 2 to 3 decades ago, but no further chemical information about this enzyme has since then been available. This enzyme has also been trivially called gelatinase, connoting that it liquefies gelatin. Previous studies show that this extracellular proteinase is newly formed, and no evidence for a proteinase zymogen was found (22). The enzyme was suggested to be a metalloenzyme with a metal specificity for zinc in reactivation after chelation (22). The purpose of the present paper is to describe a modern purification procedure for this enzyme and to report completely new substrate specificity data concerning proteins and bioactive peptides, including pheromone-related substances (11) produced by the organism. This new information, supplemented by results from chemical modification studies, was considered to facilitate the classifi- cation of the enzyme. This research effort is related to our aspiration toward a better understanding of the relationship between connective tissue and the extracellular proteinase profile of organisms pathogenic to humans (23).

EXPERIMENTAL PROCEDURES

Bacterial Strain and Cultiuution-The strain used in this study was 9. faecalis var. liquefaciens OG1-10 (24), a streptomycin-resistant mutant of the cariogenic human isolate 2SaR (14). Cells (1% inocula) were grown aerobically in a brain-heart infusion medium (Difco) in

3325

3326 Metalloendopeptidase f rom S. faecalis

I-liter batches for 18 h (late stationary phase) with swirling a t 80 rpm. Generally eight batches were prepared a t a time, Cells were removed by centrifugation for 20 min a t 15,000 X g (4 "C). The supernatants were concentrated (see below) and stored a t -20 "C while a total of 80 liters of material was accumulated over a period of 6 weeks.

Chemicals-Unless specifically indicated, the chemicals were obtained from Sigma. The S. faecalis pheromones were synthesized by Milligen (25). The water used in this study was prepared with a Millipore Milli-Q system and had a resistivity of 18 megaohms cm".

Enzyme Determinations-Because Azocoll was most rapidly bro- ken down by the present enzyme, the proteinase activity was routinely determined using this substance as a working substrate (26, 27). The hydrolysis of other proteins and peptides was studied using the conventional and/or the Cd-ninhydrin methods (28). For comparative purposes these methods were also used to study the hydrolysis of Azocoll. The hydrolysis of Azocasein, elastin-orcein, and furylacryloyl peptides was also determined using specific methods for each substrate (29-31). The hydrolysis of N-aminoacyl-2-naphthylamide, N"- benzoyl-DL-arginine p-nitroanilide, and phenylazobenzyloxycar- bony~-L-prolyl-L-leucylglycyl-L-prolyl-D-arginine was also studied using specific methods (32-34). Because Azocoll (Calbiochem: 50-100 mesh) was used as a working substrate in the purification procedure, the specific activities could not be given in chemical (mol/liter) terms. In this study, 1 unit of proteinase corresponded to the amount of enzyme capable of increasing the extinction coefficient of the reaction mixture in 1 min from 0.000 to 0.001 (37 "C), tested in the following mixture: 5 mg of prewashed (27) Azocoll in 1.0 ml of 50 mM Tris-HC1 buffer containing 1.0 mM CaZc, pH 7.8.

Protein Determination-The "absolute method (35) based on difference in absorbance a t 235 and 280 nm was used to determine the protein concentrations except in chromatography where the ab- sorbances were monitored a t either 280 or 214 nm.

Determination of the Cleavage Site of Peptides-The peptide substrates were incubated for various periods of time (15 min to 24 h) in 50 mM Tris-HC1 (pH 7.8, 1 mM CaCI2) which contained 0.75-2.0 wg of enzyme and a suitable quantity of the peptide (1 mM pheromones and other peptides or 2 mg of insulin-derived peptides), a t 30 "C. Aliquots of the mixtures were withdrawn at desired reaction times, chilled to 0 "C, and immediately subjected to RPC' on a PepRPC HR 515 column. Eluent A was 0.1% trifluoroacetic acid in water and eluent B was 0.1% trifluoroacetic acid in acetonitrile. The gradient was 0 to 30% eluent B in 15 min and 30 to 100% eluent B in 15 min at a flow rate of 1.4 ml/min (a shallower gradient of 30-40% during the last 10 min was used in insulin studies). The separation of the peptide fragments was monitored a t 214 nm. The peaks were re- covered and the corresponding pools evaporated to dryness using a SpeedVac evaporator. The dry residues were hydrolyzed for 4 h at 145 "C in 6 N HC1, and the resulting hydrolysates were evaporated to dryness. The final dry residues were dissolved in Beckman NaS dilution buffer for amino acid analyses on a Beckman System 6300 high performance analyzer, The molar ratios of the individual amino acids were used to determine the structure of the peptide fragment involved.

SDS-PAGEElectrophoresis-The Pharmacia PhastSystem including the PhastGels and SDS Buffer Strips was used to study the homogeneity of the enzyme. The purity of the enzyme was determined using a silver staining method optimized for SDS-PAGE with PhastGel gradient media (8-25%).

Characterization of the Enzyme-The chemical modification of the proteinase and other characterization studies were carried out as follows: carbethoxylation with DEP according to Miles (36), nitration with TNM as suggested by Sokolovsky et al. (37), and the diketone and ketone aldehyde studies as described previously (38). Other details were mentioned previously (23).

RESULTS

All purification procedures were performed at +4 "C, except FPLC which was carried out at 22 "C. The purification of the

' The abbreviations are: RPC, reversed phase chromatography; Mes, 4-morpholinoethanesulfonic acid; BES, N,N-bis(2-hydroxy- ethyl)-2-aminoethanesulfonic acid; Tricine, N-tris(hydroxymethy1) methylglycine; TNM, tetranitromethane; DEP, diethyl pyrocarbon- ate; EEDQ, N-ethoxycarbonyl-2-ethoxy-1,2-dihydr0quin0line; FPLC, fast protein liquid chromatography; SDS-PAGE, sodium dodecyl sulfate-polyacrylamide gel electrophoresis.

enzyme was started by concentrating the 80-liter supernatant fluid in an Amicon Hollow-Fiber System DC2 (M, cut-off 10,000; cartridge HlP10) to 1604 ml.

Precipitation with Ammonium Sulfate-The enzyme present in the 1,604-ml concentrate was precipitated with ammonium sulfate at 50% saturation. After 2 h standing, the mixture was centrifuged at 27,500 X g for 15 min, and the pellets were suspended in 50 mM Tris-HC1, 1 mM CaZ+, pH 7.8, to a final volume of 165 ml. The enzyme was completely precipitated at 50% ammonium sulfate saturation while most of the contaminating protein was excluded (Fig. 1A).

Gel Permeation Chromatography-The 165-ml sample was passed in seven successive lots through a Sephadex G-200 column (Fig. 1B). The active fractions from all separations were combined (2724 ml) and subjected to the next step.

Hydrophobic Interaction Chromatography (Batch Opera- tion)-A pilot study (Fig. 2 A ) on a phenyl-Sepharose C1-4B column showed that the enzyme was effectively purified with a high yield. This justified the use of batch operations in large-scale purification. Accordingly, suitable quantities of phenyl-Sepharose C1-4B were washed with 50 mM Tris-HC1 (1 mM Ca2+, pH 7.8) and filtered through a Pyrex 40-50 glass filter. About 370-ml aliquots of the enzyme from the above Sephadex G-200 pool were mixed with 38 g of filter-dry gel. The mixtures were incubated with occasional stirring. Binding

0 Supernatant

s Pew$ 0 Supernatant

]

J Protein 0.5 m Pellet

AS20 0.4

A280 0.3

0.2

0.1

0

A520 A280

0.6

0.5 0.10

M Protein

0.4

0.3

0.2 0.05

0.1

750 1000 1250 1500 1750 2000

Elution Volume (mi) FIG. 1. Separation of the S. fuecalis proteinase by ammo-

nium sulfate precipitation and gel filtration. Panel A, precipitation of the enzyme by ammonium sulfate, indicating selective precipitation at a relatively low saturation of salt. For protein meas- urements of 280 nm, the supernatants and the pellets were diluted 100- and IO-fold, respectively. Panel B, gel filtration of the enzyme on a Sephadex G-200 column (5 X 90 cm). The column was equilibrated and eluted with 50 mM Tris-HC1, pH 7.8 (1 mM Ca"), a t a flow rate of 1.3 ml h" cm-'. 23.6 ml of the enzyme after ammonium sulfate precipitation was applied.

Metalloendopeptidase from S. faecalis 3327

A 2 8 0

2.0

1 .o

0

35% an BI

h - 0 E 50 0

-+, 40 T-

E Y

C Q)

30 .- CI 2 20 n

10

C

A M Protem M Activity

Buffer I

I , 10 20

Jffe 1IT

Glycol in buffer 50% Ethylene

1 Buffer 50% Ethylene

Glycol in buffer I 1

10 20 30 40 50 60

1. sulfate r +

B I Protein 0 Activity

Total protein 193 mg

30 40 50 60

t 1000

glycol in buffer 50% Ethylene

2000

1.5

1.4

1.3

1.2 - 0 N u)

1.1

c >r 1 .s .- 2 i! E

c

0.6 c u

0.5

0.4

0.3

0.2

0.1

0

Buier Elution Volume (ml) FIG. 2. Separation of the enzyme on phenyl-Sepharose C1-

4B gel. I’and A, column chromatography (0.8 X 10 cm). The enzyme was adsorbed in the presence of 35% ammonium sulfate. Elution was performed in three steps: 1) 35% ammonium sulfate in 0.1 M Tris- HC1 (1 mM Ca”’, pH 7.0); 2) the same buffer without ammonium sulfate; 3 ) the same buffer with 50% ethylene glycol. Panel B, batch separation of the enzyme in the absence of ammonium sulfate. The amount of total protein in the starting material and in the ethylene glycol-desorbed enzyme is indicated. The protein concentrations show the total amount of protein present in the 100-ml aliquots of buffer used to desorb the enzyme. The results justified the use of batch technique in mass purification.

was almost complete within 1 h, but the reaction was continued overnight to ascertain complete binding. The mixtures were then filtered, and the gels were washed six times with 100-ml portions of the above buffer allowing the mixtures to stand each time for 30 min before filtration. No enzyme was washed out during this procedure. For the desorption of the enzyme, the gels were subsequently treated at 22 “C with eight successive 25- to 50-ml portions of 50% (v/v) ethylene glycol in 50 mM Tris-HC1 (1.0 mM Ca“, pH 7.8), 30 min at a time (Fig. 2B). The entire Sephadex G-200 pool was treated in this way after which all ethylene glycol-containing filtrates were

combined, dialyzed, and concentrated with an Amicon stirred cell concentrator (Mr cut-off 10,000) under nitrogen to 43 ml. This concentrate was dialyzed for 50 h against 5,000 ml of 10 mM Tris-HC1 (1 mM Ca2+, pH 7.0), changing the buffer three times. The concentration was thereafter continued on an Amicon Centricon-10 Microconcentrator to 4 ml. The enzyme was now dialyzed against 1,000 volumes of 5 mM phosphate buffer, pH 7.0, for 72 h (tubing M, cut-off 12,000-14,000). The concentration of ethylene glycol in the enzyme was reduced below 0.001%.

Hydrophobic Interaction Chromatography (Column)-0.9- ml aliquots of the enzyme from the previous step were mixed with 0.1 ml of 2.5 M ammonium sulfate in 5 mM phosphate buffer, pH 7.0. The resulting 1.0-ml samples were injected into a phenyl-Superose HR 5/5 column. The isocratic elution was performed with 5 mM phosphate buffer, pH 7.0, a t a rate of 0.5 ml/min, collecting 0.5-ml fractions. At elution conditions indicated in Fig. 3A the proteinase was eluted at 10 to 20 min. The active fractions were combined from each separation, and the resulting pool was concentrated with Centri- con-10 membrane filters to 4 ml.

Gel Permeation Chromatography by FPLC: Purity of the

0.4

0.3

A

I I 0.2

f Y

C

0.1

c 0 I

c

n 0.01!

A

0.011

I I Y

a 0.M

10 20 30 40 50 Retention Time (min.)

1.8

1.6

1.4

I 1.2 = s. E

0 . 5 I

Y

(Y Y)

c

0

3.6 5 W

E

0.4

0.2

0

FIG. 3. Final purification of the enzyme by successive FPLC procedures on a hydrophobic interaction and a gel permeation column. Panel A, the phenyl-Superose HR 5/5 column was equilibrated and eluted with 5 mM phosphate buffer, pH 7.0, a t a flow rate of 0.5 ml/min. Panel B, the enzyme from the above step was chro- matographed on a Superose 12 HR 10/30 gel column using 10 mM Tris-HC1 (1 mM Ca”, 100 mM NaC1, pH 7.0) as the elution buffer at a rate of 0.5 ml/min. Sample volume was 0.42 ml.

3328 Metalloendopeptidase from S. faecalis

Enzyme-Suitable aliquots of the enzyme from the previous step were injected into a Superose 12HR 10/30 gel column. The enzyme appeared as one homogeneous peak that coin- cided with the single protein peak observed (Fig. 3B). The purity and specific activity of the enzyme did not essentially improve in this chromatography (Table I), indicating that the enzyme was obviously already homogeneous before step 7 (Table I). The enzymes obtained after steps 6 and 7 were SDS-PAGE-pure (8-25% gradient, silver staining).

Molecular Weight and Isoelectric Point-The molecular weight of the enzyme was determined with the following results: SDS-PAGE, 33,000; Sephadex G-100, 32,000; Super- ose 12 (FPLC), 29,500 (mean 31,500). The isoelectric point of the enzyme was 4.6.

Hydrophobicity of the Enzyme-The S. faecalis proteinase was strongly hydrophobic: the enzyme was completely precipitated even from diluted protein solutions using 50% ammonium sulfate; precipitation started already a t 20-30% saturation. The enzyme was also very strongly bound to phenyl-Superose and phenyl-Sepharose gels even in low ion concentrations. The strength and specificity of this binding which took place without added salt demonstrate the possibility that the hydrophobic phenyl residues of the gels directly interacted with a hydrophobic site of the active domain of the enzyme. The strong hydrophobicity of the active domain is supported by the ability of the enzyme to hydrolyze insoluble hydrophobic substrates and by the presence of hydrophobic amino acid residues adjacent to the scissile peptide bonds (see below). Table I1 gives the amino acid composition of the enzyme which shows, with regard to a t least 11 amino acids, a rather close similarity with the amino acid composition of Staphylococcus aureus metalloendopeptidase (39). The portion of hydrophobic amino acids in the present enzyme was at least 43%, whereas in the S. aureus enzyme and the Bacillus cereus collagenase (23) the portion of these amino acid residues was about 40 and 37%, respectively.

Substrate Specificity-Azocoll proved to be a superior protein substrate for the S. faecalis proteinase; it was convenient to use and it was hydrolyzed a t a high rate (Table 111). None of the 24 commercially available (Sigma, Calbiochem) aminoacyl-2-naphthylamides (including N*-benzoyl-DL-arginine-2-naphthylamide) was hydrolyzed by the enzyme. Na-Benzoyl-DL-arginine p-nitroanilide, phenylazobenzyloxycarbonyl-L-prolyl-L-leucylglycyl-L-prolyl-D-arginine, and 2- furylacryloyl-L-leucylglycyl-L-prolyl-L-alanine were not hydrolyzed either. 3-(2-furylacryloyl)-glycyl-~-leucyl amide was hydrolyzed at a very low rate at the Gly-Leu bond. Elastin- Orcein and Hide Powder Azure were very poor substrates.

Several bioactive peptides and S. faecalis pheromones were hydrolyzed at a higher rate. The specificity studies are summarized below.

Proteins-The enzyme was able to completely dissolve Azo- toll in 50 mM Tris-HCI, pH 7.8 (containing 1 mM CaC1,); a 10-pg aliquot of the enzyme dissolved a 5-mg quantity of Azocoll in 3 h a t 37 "C. When the completely dissolved material was subjected to FPLC on a ProRPC column, several hydrolysis products appeared (Fig. 4A); the products were eluted at a higher than 20% acetonitrile concentration. The molecular weight of the products was studied using Centricon membrane filters (Mr cut-off 10,000 and 30,000) (Fig. 4.4 inset) and gel permeation chromatography on a Superose 12 column (Fig. 4B). Accordingly, products with a large molecular weight (>30,000) appeared very fast in the reaction mixture, accompanied or followed by a clearly slower liberation of products with molecular weights <30,000. Fig. 4C shows a similar separation of gelatin on Superose 12; the products were essentially the same size as in the Azocoll experiment. Several soluble and insoluble collagens and tritiated rat tail tendon type I collagen (not shown) were hydrolyzed. Based on the gelatin values, the percentage of the total collagen cleaved was in the range of 1-25%.

Peptides-Table IV shows that four S. faecalis sex pheromone-related peptides (two pheromones and two inhibitors) were hydrolyzed at a site involving a Leu residue on the imino side of the scissile bond. The pheromone-related peptide cAM373 (Ala-He-Phe-Ile-Ala-Ser) was not hydrolyzed. Insu- lin B-chain was rapidly cleaved at Phe24-Phe25, followed by the hydrolysis at His5-Leu'. Prolonged incubation resulted in the hydrolysis of a t least Ala14-Leu15 and His'o-Leul'. All cleavage sites were characterized by the presence of a hydrophobic amino acid residue on the imino side of the peptide bone (Fig. 5). Insulin A-chain was hydrolyzed a t a much lower rate than B-chain, the only scissile bonds (in 1-h incubation) being Gln'5-Leu''- and Tyr14-Gln15, in this order of preference. The other peptides tested were also hydrolyzed at sites involving a hydrophobic amino acid residue on the imino side of the scissile bond. Leucine-enkephalin would theoretically be a good substrate, as judged by the presence of a Gly-Phe bond in the molecule. The very low rate of hydrolysis of this substrate indicates, however, that pentapeptides may represent the minimum substrate length that can trigger catalysis by this enzyme. Substance P liberated the following peptides: Argl-Gln', Arg'-Phe7, Arg'-Glyg, Phe7-Gly-', Phe7-Met", Phe*-Met", and Leu''-Met". The hydrolysis of most of these bonds progressed concertedly, but the formations of Arg'-Glyg and Leu"-Met" were the primary and the fastest hydrolytic

TABLE I Purification of the extracellular collagenolytic proteinase from S. faecalis uar. liqufmiens (strain OG1-IO)

Specific Yield Purification Step Volume Protein Total protein factor

ml mglml g % -fold

1. Supernatant fluid of culture filtrate 80,000 1.0 800 0.041 100 1 2. After Hollow-Fiber concentration 1,604 19.3 31 0.966 91 23.5 3. After ammonium sulfate precipitation 165 533 8.8 3.3 88 80.5 4. After gel permeation chromatography 2,724 0.59 1.6 16.0 78 390 5. After hydrophobic interaction chromatog 178 0.197 0.035 434.8 46.4 10,605

6. After hydrophobic interaction chromatog- 4 1.17 0.0047 647 9.3 15,780

7. After gel permeation chromatography 4 1.10 0.0044 650 8.7 15,853

raphy (batch operation)

raphy (FPLC column)

(FPLC column) * In enzyme units min" mg" (1 unit of the enzyme produced an extinction coefficient of 0.001 in 1 min a t 37 "c

when tested in 50 mM Tris-HC1, pH 7.8, using Azocoll as substrate (cf. "Experimental Procedures"). 'The enzyme was stored a t -20 "C in 5 mM phosphate buffer, pH 7.0.


TABLE I1 Amino acid composition of the extracellular proteinase from S.

faecalis (OGI-10) Residues per molecule of enzyme

Amino acid S. faecalis metalloprotease Thermolysin S. aureus

(39) enzymea (39)

Aspartic acid 44 58 44 Threonine 22 23 25 Serine 23 22 26 Glutamic acid 32 41 21 Proline 10 5 8 Glycine 32 36 36 Alanine 32 28 28 Cysteine N D ~ 0 0 Valine 18 18 22 Methionine 4 5 2 Isoleucine 13 12 18 Leucine 19 19 16 Tyrosine 22 22 28 Phenylalanine 12 12 10 Histidine 9 9 8 Lysine 20 20 11 Tryptophan ND 2 3 Arginine 10 7 10 The values cited were corrected for losses during hydrolysis. The

hydrolysates were analyzed on a Beckman Model 6300 high performance automated amino acid analyzer using norleucine as internal standard. The samples were hydrolyzed for 4 h in 6 N HC1 at 145 "C.

* Not determined.

TABLE 111 Effect of S. faecalis proteinase on varioua peptides and proteins

All assays were carried out at 30 "C in 50 mM Tris-HC1 with 1 mM Ca2+, pH 7.8, for 3 h in a shaking water bath. The 1-ml reaction mixtures contained 0.2 pg of enzyme and 2 mg of substrate. No attempts were made to solubilize the protein.

Substrate Regular ninhydrin method"

Insulin B-chain oxidized (Mann) Casein-yellow, bovine (Calbiochem) Polypeptide, high viscosity (Sigma), from colla-

Polypeptide, low viscosity (Sigma), from colla-

Azocasein, sodium salt (Calbiochem) Azoalbumin, bovine albumin fraction V

Hemoglobin, bovine (Pierce Chemical Co.) Fibrinogen, bovine, plasminogen-free (Mann) Fibrinogen, bovine, fraction I (Calbiochem) Insulin, bovine pancreas (Mann) Hide Powder Azure (Calbiochem) Azocoll

gen

gen

(Sigma)

57,330 10,901 5,835

5,767

3,594 2,105

1,934 1,182

890 462 154

24.247 nmol min" mg" (liberated free amino groups).

events, followed by the formation of Arg'-Phe7 and Argl-Gln' (in this order). Of the products that contained the NH2- terminal Arg', only Arg'-Glyg was hydrolyzed further. Table V compares the specific activities of the enzyme for the scissile bonds in insulin B-chain and substance P and shows the corresponding K,,, values.

Nature of the Amino Terminus of the Hydrolysis Products of Azocoll-Azocoll was incubated with the enzyme for 24 h in 50 mM Tris-HC1, pH 7.8 (containing 1 mM Ca2+), and the NH2-terminal amino acids of the hydrolysis products were identified by treating the peptides so liberated with amino- peptidase M (Pierce Chemical Co.). The gelatinase had hydrolyzed in Azocoll peptide bonds whose imino group belonged to one of the following hydrophobic amino acids: Ala, Leu, and Phe.

[ A

0 10 20 30 40 50 80 Retention lime (min.)

FIG. 4. Hydrolysis of Azocoll and gelatin by the S. faecdie proteinase. Panel A, RPC on a ProRPC HR 5/5 column of the hydrolysis products of Azocoll, after complete dissolution of the solid substrate (5 mg) by the enzyme (10 pg/ml). Eluent A was 0.1% trifluoracetic acid in water and eluent B was 0.1% trifluoroacetic acid in acetonitrile. The gradient was 20 to 35% B in 20 min, followed by 35 to 100% B in 2 min at a flow rate of 0.5 ml/min. Inset of Panel A: liberation of the end products as a function of time. The approximate sizes of the products were determined by centrifugation of the reaction mixtures through membrane filters (Centricon-10, M, cut-off 10,OOO and Centricon 30, M, cut-off 30,000, respectively). Panel B, gel permeation separation of the hydrolysis producta of Azocoll (Panel A ) on a Superose 12 HR 10/30 column at a flow rate of 0.5 ml/min. The approximate location of the products with a molecular weight of 30,000 and 100,000 is indicated. The column was eluted with 10 mM Tris-HC1 (1 mM Ca2+, 100 mM NaC1, pH 7.0), at a rate of 0.5 ml/ min. The thoroughly prewashed Azocoll displayed at 214 nm a peak with a retention time of 44 min, which represented a compound not attacked by the proteinase. Panel C, gel permeation separation of the hydrolysis products of gelatin (2 mg/ml in 50 mM Tris-HC1, 1 mM Ca2+, pH 7.8) by the proteinase (1 pg; 30 min at 37 "C) on a Superose 12 HR 10/30 column. The conditions and other details were as for Panel B.

Effect of pH-Azocoll was rapidly hydrolyzed by the enzyme over the pH range of 6 to 8 (Fig. 6A). The optimum pH of the hydrolysis of the Ser3-Leu' bond in the pheromone CAD1 was about 7.2 (Fig. 6B) . The sharper pH optimum observed in the hydrolysis of the pheromone indicates a different type of mechanism of hydrolysis at acidic pH values compared with Azocoll. The stability of the enzyme strongly decreased at acidic pH values: treating the enzyme for 17 h in 50 mM Mes, pH 4.8-7.5, showed that it was stable only above pH 5.6. These results are in line with the metalloenzyme nature of the enzyme; many metalloproteases are inactivated at low pH values because of loss of metal.

3330 Metalloendopeptidase from S. faecalis

TABLE IV Effect of S. faecalis proteinase on peptides

All assays were carried out at 37 "C in 50 mM Tris-HC1 (1 mM CaZ+, pH 7.8) in 1.0-ml reaction mixtures containing 2 pg of gelatinase. [SI = 1 mM. The arrows show the sites of hydrolysis (J* indicates very low rate of hydrolysis).

Substrate Amino acid sequence and sites of hydrolysis

S. faecalis pheromones-related peptides: I

iPDI" Ala-Leu-Ile-Leu-Thr-Leu-Val-Ser 4

CADI* -1

Leu-Phe-Ser-Leu-Val-Leu-Ala-Gly

iADI"

cPDlb

Bradykinin

[Lys'IBradykinin

1 -1'

1 1 1 1

Leu-Phe-Val-Val-Thr-Leu-Val-Gly

Phe-Leu-Val-Met-Phe-Leu-Ser-Gly

Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg

Lys-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg 1 1 1 1 1

Lys-Bradykinin Lys-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg

Substance P Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met-N&

Angiotensin I

Angiotensin I1

Cholecystokinin'

Glucagon'

Leucine-enkephalinc

@-Lipotropin'

Neurotensind Lys - 6

1 1 1 1

1

1' 1*

1'

Asp-Arg-Val-Tyr-Ile-His-Pro-Phe-His-Leu

Asp-Arg-Val-Tyr-Ile-His-Pro-Phe

Tyr-Met[SO3H]-G1y-Trp-Met-Asp-Phe 27 28 29 30 31 32 33

Phe-Val-Gln-Trp-Leu-Met-Asn-Thr 22 23 24 25 26 27 28 29

Tyr-Gly-Gly-Phe-Leu

Arg-Tyr-Gly-Gly-Phe-Met 60 61 62 63 64 65

Pro-Arg-Arg-Pro-Tyr-Ile-Leu 7 8 9 10 1 1 12 13

Competitive inhibitors of pheromones produced by plasmid-containing strains.

Peninsula Laboratories, Inc. (San Carlos, CAI; the pheromone-like peptides were from Milligen, and all other * Sex pheromones.

peptides were from Sigma. Only partial sequence is shown.

Identification of Active Site Groups-Previous studies have established that the zinc atom in this enzyme is essential for activity (20,21). We confirmed this and additionally obtained new information from chemical modification studies which are summarized as follows. Phenylglyoxal and 2,3-butane- dione, studied under non-photooxidative conditions in borate buffer (38), were not inhibitory, indicating that the enzyme activity may not depend on active arginyl groups. One to 10 mM DEP, tested in 0.1 M phosphate buffer, pH 6.9, or in 90 mM Mes, pH 6.8, in the presence of 0.3 1 M enzyme at 22 "c , caused a rapid and progressive loss of enzyme activity. Treat- ment of the inactivated enzyme with 0.1 M hydroxylamine for 17 h at 4 "C restored 50% of the activity. Five mM TNM, tested in 40 mM Tris-HCI, pH 7.5-11.2 a t 22 "C, caused in 30 min a rapid, progressive, and irreversible inactivation of the enzyme that was more pronounced in the alkaline region: at pH 11 about 85% of the activity was destroyed (the enzyme was relatively stable at this pH). The pH profile of inactivation closely followed the nitration curve of free N-acetyltyrosine. o-Chloranil (3,4,5,6-tetrachloro-1,2-benzoquinone) was the most potent inactivator: 3 p M o-chloranil, tested in 45 mM Tris-HCI, pH 7.8 (containing 1 mM Ca2+), caused a 95% inactivation in 10 min. We have shown elsewhere (40) that this reagent is an almost "equimolar inhibitor" of B.

cereus, Clostridium histolyticum, and Achromobacter iophagus collagenases. Finally, 5 mM EEDQ, tested in 80 mM Tris-HC1 (pH 7.0, at 25 "C; all EEDQ was dissolved), caused a 70% irreversible inactivation in 100 min.

Phenylmethanesulfonyl fluoride did not inhibit the enzyme in the normal assay mixture for Azocoll hydrolysis. Ten mM L-leucine hydroxamate, a protease inhibitor (41), inhibited the enzyme by 60%. Phosphoramidon [N-(a-L-rhamnopyra- nosyloxy-hydroxyphosphinyl)-~-leucyl-~-tryptophan] inhibits thermolysin very effectively (42), but inhibits collagenases to a lesser extent. This reagent inhibited the S. faecalis enzyme less effectively than thermolysin (0.3 mM reagent inhibited by 50%). Straight-chain aliphatic alcohols (from methanol to butanol) caused a reversible inactivation, the degree of which was a linear function of the length of the carbon chain: 50 mM n-butyl alcohol inhibited by loo%, whereas 50 mM methanol caused only a 15% inhibition. The inhibitory potential of secondary and tertiary alcohols was weaker.

Inhibition of the Enzyme by a High Molecular Weight Factor Present in Rat Inflammatory Exudate-Samples of an inflammatory exudate were prepared under the dorsal skin in the rat (43). Aliquots of the exudate were subjected to FPLC on a Mono Q HR 5/5 anion exchange column (Fig. 7). The chromatographic fractions were then incubated with small

3331

FIG. 5. Sequences of insulin A- and B-chain showing the peptide bonds primarily hydrolyzed by the S. faecalis proteinase. The arabic nu- merals above the vertical arrows indicate the order of preference of the hydrolysis sites of B-chain. The incubation times used with B-chain ranged from 15 min to 22 h. A-chain was incubated for 17 h.

2 B 1

TABLE V Specific activity and the values of K,,, of the hydrolysis

of insulin B-chain and substance P catalyzed by S. faecalis extracellular endopeptidase

Scissile bond Specific activity" K, ( M ) ~

PheZ4-Phez5 (insulin B-chain) 75,573 7.25 X 10-~ Substance P

Gln6-Phe7 9,417 4.9 X 10-~ Phe7-Phe' 13,250 2.0 X 10-~ Glyg-Leu'' 120,760 1.2 X 10"

In nmol X min-' mg". Determined at 37 "C with insulin B-chain

Means of values determined using the Lineweaver-Burk, Hanes, and at 30 "C with substance P in 50 mM Tris-HC1, pH 7.8.

and Hofstee methods.

amounts of the enzyme using Azocoll as the substrate under normal conditions (50 mM Tris-HC1,l mM Ca2+, pH 7.8). The enzyme was strongly inactivated by a substance with the retention time of about 33 min. The molecular weight of this substance, determined by FPLC on a Superose 6 gel column (not shown), was 720,000-750,000 (human az-macroglobulin has a M , of 725,000).

DISCUSSION

General-The present purification procedure of the S. fae- calk extracellular proteinase allows structural studies. The enzyme appeared to be a strongly hydrophobic protein that interacted with hydrophobic and insoluble collagenous substrates. These studies confirmed the previous results (18, 19) concerning the pH optimum of the enzyme (ie. 7.4-7.6) and the loss of enzyme stability below pH 6. The present studies provided new information about the pH optimum of the hydrolysis of Azocoll and certain S. faecalis peptides (ie. pH 7.0-7.2). The PI value of 4.6 determined in this study corresponds well t o the value of 4.7 reportedearlier (21). Depending on the method used, the molecular weight of the enzyme ranged from 29,500 to 33,000. The consistency between the present and the previous (21) findings are further exemplified by the value of 32,000 obtained in this study with Sephadex

0.2

0.1

E B i B 0.4

4 0

W

0.3

0.2

0.1

0

TRICINE J

I I I I I

5 8 7 8 9 PH 1

5 6 7 8 9 P H

FIG. 6. Effect of pH on the hydrolysis of Azocoll (A) and the S. faecalis octapeptide pheromone CAD1 (Leu-Phe-Ser-Leu- Val-Leu-Ala-Gly) (B). Panel A, the hydrolysis of Azocoll was determined at 37 "C in 50 mM buffers. 5 mg of Azocoll was incubated for 35 min with 40 ng of the enzyme. The activity is in Abm. Panel B, 1 mM CAD1 was incubated for 50 min with the enzyme (40 ng) in 50 mM Mes buffer. The enzyme activity is given in the amount of liberated amino groups (determined with ninhydrin (NZNH)) or as the amount of peptides (as peak areas) revealed after reversed-phase

PepRPC HR 5/5 column. Inset, effect of pH on the stability of the (R-P) chromatography of the reaction mixtures on a Pharmacia

enzyme. Tested by treating the enzyme for 17 h in 50 mM Mes buffer at the pH values indicated and measuring the enzyme activity with Azocoll under normal conditions (50 mM Tris-HC1, pH 7.8, 1 mM Ca2+).

G-100 gel and the same value reported previously using Seph- adex G-75. Sedimentation equilibrium studies yielded a value of 28,000 (21). We also confirmed the previous findings (20)

3332 Metalloendopeptidase from S. faecalis - fw-l ;

; I ?

- 1.0 Unlnhlblloa ,

( , ( I -w I

- 0.8 I

I 6 I I I

- 0.6 - I Y E

0 10 20 30 40 50 0 0

Retention Time (min.) FIG. 7. Inhibition of the S. faecalis gelatinase by a substance

present in an inflammatory exudate from the rat. Inflammatory exudate was produced under the dorsal skin of the rat (45). The exudate was subjected to FPLC on a Mono Q anion-exchange column equilibrated and eluted with 10 mM Tris-HC1 (1 mM CaCI2, pH 7 3 , using a linear NaCl gradient from 0 to 0.4 mM in 45 min (flow rate 2.0 ml/min). The fractions (0.5 ml) were incubated in the presence of the proteinase using Azocoll as the substrate. The decrease in enzyme activity was caused by a substance with a retention time of 33 min.

on the metalloenzyme nature of the enzyme. It is noted that the S. faecalis extracellular proteinase is a

“neutral” proteinase, as evidenced by the present and earlier (18, 19) pH studies. However, the synthesis of the enzyme may reach its maximum in acidic environments. An optimal pH of 7.4 was reported by enterococcal proteolytic activity (44), but an optimal pH of 6.3 was demonstrated for enzyme synthesis (45).

Substrate Specificity-Previous substrate specificity studies have shown only that the enzyme is capable of hydrolyzing casein, gelatin, hemoglobin, and a streptococcal lysin (46) and that the enzyme clots milk (18). The present study provides totally new information on the substrate specificity. Accord- ingly, insoluble Azocoll proved to be a superior protein substrate: it was totally solubilized by the enzyme producing high molecular weight protein fragments. Similar molecular weight distribution of the products was also observed when gelatin was used as substrate, suggesting the scission of similar peptide bonds in both substances. The S. faecalis proteinase can clearly be regarded as an endopeptidase with no aminopepti- dase, dipeptidase, or tripeptidase activity. Because proteinases characteristically have an extended substrate binding site, suitable peptide substrates can be expected to have at least five or more amino acid residues to fulfill the requirements for binding and catalysis. Although detailed cleavage studies on collagens will be published later, it can be observed that S. faecalis enzyme hydrolyzed all soluble and insoluble collagens and tritiated type I collagen.

The present proteinase showed a fairly strict requirement for a hydrophobic amino acid residue at position P; (47) (Table IV). This residue was either Leu, Phe, or Ile, although P; could also be Tyr or Trp. Therefore, this enzyme exhibited endopeptidase (EC 3.4.24.11)- and thermolysin-like (EC 3.4.24.4) specificity. Replacement of the imino side residue by small neutral amino acids such as Ala or Gly greatly dimin- ished or virtually eliminated the activity. Overall, the present proteinase hydrolyzed peptide bonds involving the carbonyl group contributed by a variety of amino acid residues like Ser, Thr, Tyr, Gly, Gln, Phe, His, Val, and Pro. However, these

single residues do not alone dictate the specificity; the extended binding regions of most endopeptidases also play a role. In thermolysin, for example, 3 residues on the NH,- terminal side and 2 residues on the COOH-terminal side of the scissile bond affect the catalysis (48). The presence of an extended active site in the present enzyme is suggested by the specificity studies performed. The fact that the bradykinins were hydrolyzed at the Pro-Phe bond suggests that 2 residues on the imino side of the scissile bond are a minimum requirement for catalysis.

It is also noted that although the present proteinase was very active against insulin B-chain, insulin itself was a very poor substrate. The resistance of insulin to attack also by the mammalian endopeptidase has been confirmed (49). Ther- molysin (47) favors the sequence -Ala-Phe-Phe- in positions Pz, PI, and Pi, respectively (Phe-Phe forming the scissile bond). In the insulin B-chain, the sequence -Gl~~~-Phe’*- PheZ5- (for P2, PI, and P:, respectively) corresponds to the above sequence. These hydrophobic specificity requirements seem to be very similar for thermolysin and the S. faecalis enzyme. With both enzymes PheZ4-Phez5 is the primary site of attack. The preference of Phe-Phe as a cleavage site implies that the S. faecalis enzyme contains a hydrophobic pocket, similar to that of thermolysin, at the S: subsite which inter- acts with side chains of the hydrophobic amino acid residues. A size restriction has been shown to exist for this hydrophobic pocket, however, because the phenolic group of Tyr probably causes some bad contacts and misalignment (50, 51). The S. faecalis enzyme showed weak activity toward a peptide bond where Tyr occupied the P; position, and the rate of the hydrolysis of this bond was very small compared with that of a bond where Phe occupied this position. Chemically, such rate differences can be expected when comparing the pheno- late ion with the plain benzene ring of Phe. No such size restrictions seem to be imposed on residues binding to the SI subsite (50). Our data thus suggest that the S. faecalis proteinase SI subsite can interact with both hydrophobic and weakly hydrophilic amino acid residues.

Comments on Active Site-The DEP-caused inactivation and the 50% reactivation of the inactivated enzyme by hydroxylamine suggest that the modifier had perhaps reacted with an imidazole residue important to enzyme activity. In the pH range of 6 to 7 (used in the present experiments), DEP is highly specific for histidine (52), although certain other residues may also react with DEP. The failure to realize full recovery of enzyme activity with hydroxylamine treatment and complete discharge of the ethoxyformyl moiety with the enzyme may have resulted from the reaction of 2 eq of DEP per 1 eq of histidine followed by a Bamberger reaction to open the imidazole ring (53). It has been suggested that some dicarbethoxylation may occur when high molar excess of the modifier is used. Hydroxylamine readily removes the carbethoxy group from the monoderivatized residue but is ineffective at displacing the second carbethoxy function from the dicarbethoxyhistidyl residue formed by reaction with excess DEP (52). o-Chloranil, an extremely potent and fast irreversible inactivator of bacterial collagenases (40), was suggested to react with an active Tyr group of the enzymes. So far, only Cys and Tyr residues are known to react with TNM. Between pH 6 and 9 the rate of this reaction with Cys residues is independent of pH, permitting its differentiation from nitration of Tyr residues (54). The rate of inactivation with the present proteinase was pH-dependent between pH 7 and 11, and the maximum inactivation was obtained at the vicinity of pH 10. The inactivation curve also closely resem- bled that of N-acetyltyrosine. These data indicate that TNM


may have reacted with an essential Tyr residue of the enzyme. There are no conclusive data on the active site structure of

the neutral endopeptidase-24.11, although evidence for an essential His (55, 56) and an Arg residue (55) was presented. These residues were also found to be present in the active site region of thermolysin (50, 57), His residues being most likely essential (57) and Arg residues most likely participating in substrate binding (58). Our experiments with diketones and ketone aldehydes suggested no direct involvement of an active Arg residue. EEDQ, a reagent highly specific for active carboxyl groups of enzymes (59), caused a sufficiently strong (irreversible) inactivation of the S. fuecalis enzyme to indicate the importance of a carboxyl group in its activity.

Phosphoramidon which strongly inhibits thermolysin (42) and collagenase (60, 61), causing a 50% effect at low concentrations of 0.7 and 60 PM, respectively, required an about 300 PM inhibitor level for similar inhibition of the S. faecalis enzyme. Although the S. fuecalis enzyme, thermolysin, and the mammalian endopeptidase-24.11 shared many properties related to substrate specificity and although these enzymes are inhibited by phosphoramidon, the accessibility of the active site groups of the S. fuecalis enzyme to several common proteinase inhibitors was somewhat restricted compared with the reference enzymes. However, our data seem to be in agreement with previous ones in suggesting the importance of Tyr and His and carboxyl residues in the activity of this group of enzymes. Our studies thus suggest that the S. faeculis extracellular proteinase may be classified as a microbial metalloprotease I1 (EC 3.4.24.4).

Role of the Enzyme-Enzymes other than collagenases are biologically necessary for the process of physiological and pathological total collagen degradation. Degradation of collagen by specific collagenases results in the formation of collagen fragments that denature at body temperature into gelatin (62, 63). These fragments are then exposed to the action of other proteolytic enzymes, like bacterial “gela- tinases” (similar to S. fuecalis enzyme) or tissue proteinases (64). Because certain collagen fragments can be considered inflammatory mediators, the importance of microbial gelatin- olysis to human health may be significant.

Although the present proteinase may be necessary for the nutrition or chemical defense of S. fuecalis, this enzyme may also be involved in the decay of sex pheromones in culture filtrates (24, 65). Since an internal hydrophobic residue is a relatively common feature among biologically active peptides, the present proteinase, like endopeptidase-24.11, accordingly displays the required specificity to play a general role also in the hydrolysis of biologically active peptides (66). Such a role of the mammalian membrane endopeptidase-24.11 and a microbial endopeptidase with identical specificities in carrying out the termination of the physiological action of certain biologically active peptides indeed is a logical guess; the mammalian enzyme is strategically located at the cell surface, the S. faecalis enzyme being extracellular, both thus being capable of accomplishing similar reactions. Although many bioactive peptides are relatively small, the action of an endopeptidase is commonly required, especially because many such peptides have blocked NH2 and COOH termini (67). It has been concluded that a limited number of cell surface peptidases mediate a wide range of functions and that their cellular and subcellular localization, rather than peptidase specificity, de- fine their roles at different tissue sites (67). Because the s. fuecalis extracellular proteinase exhibits strikingly similar substrate specificity to the 24.11-enzyme and because S. fue- calk has been found associated with numerous inflammatory situations, it is possible that the chemical aggressiveness of

4.

5.

6.

7.

8.

9.

10. 11. 12.

13.

14.

15. 16.

17.

18.

19. 20.

21.

22.

23.

24.

25.

26.

27. 28.

29.

30.

31.

32.

33.

this organism is partly attributed to the action of one of its major secretory products, the extracellular proteinase described in our study. This proteolytic action may in vivo be directed to collagenous substances and certain bioactive peptides, and it may be counteracted by specific-tissue proteins (a2-macroglobulins?). Evolutionarily, the catalytic ability of this enzyme is not unique, but may represent a very old and widespread trait displayed by neutral proteinases from a variety of microorganisms, e.g. Bacillus, Pseudomonas, Aspergil- lus (68), and Streptococcus species.

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