structure and properties of amino acids and proteins amino acids general features

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Structure and Properties of Amino Acids and Proteins Amino Acids General Features Isomerism, Chirality and Optical Rotation Amphoteric Properties Amino Acid Side Chains Acid Base Characteristics of Amino Acids Peptides and Proteins Levels of Protein Structure - PowerPoint PPT Presentation

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Page 1: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 2: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 3: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 4: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Structure and Properties of Amino Acids and Proteins

Amino AcidsGeneral Features

Isomerism, Chirality and Optical RotationAmphoteric PropertiesAmino Acid Side ChainsAcid Base Characteristics of Amino Acids

Peptides and ProteinsLevels of Protein Structure

Primary StructureSecondary StructureTertiary and Quaternary Structures

How Protein Conformations are Stabilizing

Page 6: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 7: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

General Amino Acid Features

-O OC

R

+H3N HC

= O O-C

R

NH3+H C

=

L - isomer D - isomer

Isomerism

Constitutional isomers, nonsuperimposable, mirror images(i.e. stereoisomers)

Page 8: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

General Amino Acid Features

-O OC

R

+H3N HC

= O O-C

R

NH3+H C

=

R - clockwise

Chirality and the R, S system

S - counterclockwise

H < C < N < O

Page 9: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

General Amino Acid Features

-O OC

R

+H3N HC

= O O-C

R

NH3+H C

=

L - isomer D - isomer

Amphoteric Properties

Zwitterions

Page 10: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 11: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

ValineAlanine

Pyruvate

Nonpolar Hydrophobic Amino Acids

Isoleucine Leucine

Proline

Page 12: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Phenylalanine

Tryptophan

Tyrosine

Aromatic Amino Acids

Page 13: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Aspartic AcidOxaloacetate

Glutamic AcidA-ketoglutarate

Metabolic intermediatesMetabolic intermediates

Page 15: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 16: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

HistidineArginine

Lysine

Positively Charged Amino Acids

Page 17: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Threonine

Asparagine

Methionine

SerineCysteine

Glutamine

Amino Acids with Uncharged R- groups (but vary in polarity)

Glycine

Page 18: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Essential amino acids

1. Humans can produce 10 of the 20 amino acids. The others must be supplied in the food. 2. Failure to obtain enough of even 1 of the 10 essential amino acids, those that we cannot

make, results in degradation cellular and noncellular proteins to obtain the one amino acid that is needed.

3. Unlike fat and starch, the human body does not store excess amino acids for later use—the amino acids must be in the food every day.

4. The 10 amino acids that we can produce are:

Alanine Asparagine Aspartic acid

Cysteine Glutamic acid Glutamine

Glycine Proline Serine

Tyrosine

Tyrosine is produced from phenylalanine, so if the diet is deficient in phenylalanine, tyrosine will be required as well.

Page 19: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features
Page 20: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

Proline

Page 21: Structure and Properties of Amino Acids and Proteins         Amino Acids General Features

The essential amino acids are:

Arginine Histidine Isoleucine

Leucine Lysine Methionine

Phenylalanine Threonine Tryptophan

Valine

These amino acids are REQUIRED in the diet.

They are INDISPENSABLE .

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