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Progress Report of Project Titled: Patterns of spatial and temporal habitat occupancy in relation to crop raiding behaviour and genetic variation of free-ranging Asian elephants (Elephas maximus) in north-west India using non-invasive genetic sampling Submitted to WWF Nepal WWF-Nepal Grant Agreement # WU 04 March 2015

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Page 1: Patterns of spatial and temporal habitat occupancy in ...learningportal.wwfnepal.org/dashlib/files/2. Progress Report_Rahul... · Progress Report of Project Titled: Patterns of spatial

Progress Report of Project Titled:

Patterns of spatial and temporal habitat occupancy in relation to crop raiding behaviour and genetic variation of free-ranging Asian

elephants (Elephas maximus) in north-west India using non-invasive genetic sampling

Submitted to WWF Nepal

WWF-Nepal Grant Agreement # WU 04

March 2015

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Citation: De, R. 2015. Patterns of spatial and temporal habitat occupancy in relation to crop raiding behaviour and genetic variation of free-ranging Asian elephants (Elephas maximus) in north-west India using non-invasive genetic sampling. Annual Progress Report submitted to WWF – Nepal (Grant Agreement # WU04). Wildlife Institute of India, Dehradun.

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Progress Report of Project Titled:

Patterns of spatial and temporal habitat occupancy in relation to crop raiding behaviour and genetic variation of free-ranging Asian elephants (Elephas

maximus) in north-west India using non-invasive genetic sampling

Researcher: Rahul De, Junior Research Fellow Wildlife Institute of India Dehradun, Uttarakhand

Submitted to WWF Nepal

March 2015

Advisors: Dr. S.P. Goyal, Emeritus Scientist Sh. Qamar Qureshi, Scientist G Dr. Parag Nigam, Scientist E Wildlife Institute of India Dehradun, Uttarakhand Dr. A.C. Williams Programme Coordinator AREAS, WWF-Nepal

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CONTENTS

Acknowledgements ............................................................................................................ 1

Summary ............................................................................................................................ 3

1. Introduction: ....................................................................................................................... 5

2. Objectives: .......................................................................................................................... 7

3. Study Area: ......................................................................................................................... 7

4. Work Accomplished: .......................................................................................................... 9

4.1. Collection of faecal matter for non-invasive genetic sampling .................................. 9

4.2. Distribution of solitary males and cow herds in relation to park boundary .............. 13

4.3. Standardization of faecal DNA extraction and amplification protocol .................... 13

4.4. Identification and frequency distribution of alleles .................................................. 14

4.5. Identification of sex .................................................................................................. 16

4.6. Assessment of crop raiding patterns and attitude of farmers .................................... 16

5. References: ....................................................................................................................... 24

Appendix – 1 ..................................................................................................................... 27

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ACKNOWLEDGEMENTS

We would like to express our gratitude to the Director and Dean, Wildlife Institute of India, Dehradun for granting access to necessary facilities to conduct the study. We thank Principal Chief Conservator of Forests and Chief Wildlife Warden, Uttarakhand for granting permission to carry out the fieldwork.

We acknowledge Project Elephant, MoEFCC, India, University Grants Commission and WWF, Nepal for providing financial aid to conduct the study

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SUMMARY The Asian elephants (Elephas maximus) are declining both in terms of numbers and

range occupied throughout their strongholds. The north-west Indian population of elephants is

under severe pressure driven majorly by habitat fragmentation due to developmental activities

and other anthropogenic factors. Low genetic variability and reduced reproductive fitness are

characteristics of populations residing in such fragmented landscapes. Besides, intraspecific

and interspecific competition for resources, deterioration of habitat quality, deficiency of

natural resources and major land use changes cause elephants to stray out of the forests raiding

crop lands inflicting economic and emotional loss to humans as well as retaliatory killing of

elephants. The present project was initiated to gain understanding of socio-biology, crop

raiding patterns, population genetic structure and gene flow in north-western elephant

population in context of the conservation crises.

Partial funding of Rs. 2,00,000 (US$ 3141) was accorded by WWF-Nepal to carry out

field work for the project vide Grant Agreement #WU 04 for 2014-2015. During this period,

efforts were made towards collection of non-invasive faecal samples from the study area as

source of DNA. A total of 817 geo-referenced samples were collected out of which 68.3%

samples were collected upon direct sightings of solitary males and family herds (n=215). Age

class and sex of the animals were recorded upon encountering defaecation events. We collected

81% samples were of known female individuals, 17% were from known male individuals and

sex was not known for 2% including calves for which sex could not be identified upon sighting.

Based on direct observations, number of samples taken from calves, sub-adult, adult and old

animals were 7.3%, 15.4%, 41.4% and 35.9% respectively. Apart from solitary elephants

sighted, group size ranged from 2 individual to a herd of 16 individuals, with group size of 5

to 7 being most common (53% encounters). Of the total groups encountered, 37.8 % were

sighted outside Rajaji National Park Boundary. Average group sizes did not vary significantly

between distance classes from protected area (PA) boundary, both inside and outside PA.

Frequency of encounter for solitary males and cow herds were significantly different across

distance classes from PA boundary, showing dissimilar spatial pattern. Sighting frequency

during 2014-2015 was highest (25% for bulls, 20% for cow herds) at 0 to 1 km inside PA

substantiating the high risk of crop raiding along the boundary of Rajaji National Park.

Multi-locus microsatellite genotyping and identification of sex from faecal DNA

samples was standardized. Baseline reference data on frequency of different alleles in the

population was generated using high quality tissue and blood samples from the study area

which would be used to eliminate any false alleles being amplified from relatively inferior

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quality faecal DNA samples. The allele sizes ranged from 94 bp to 169 bp.

We used a 28 point structured questionnaire survey in 34 locations stratified in 6 zones

along Rajaji National Park boundary and interviewed a total of 90 respondents dependent on

agriculture. We found that a total of 11 combinations of 5 commercial crops (paddy, wheat,

sugarcane, maize and mango) were cultivated in the area. Farmers cultivating only sugarcane

reported highest mean number of crop raids per year (107.5). Number of crop raids were

highest along the southern boundary of RNP (mean raids per year=80.26) compared to other

parts of the RNP-human settlement interfaces. Growth stages during which raiding was most

frequent for paddy, wheat, sugarcane and maize were mature, semi-mature, immature and

semi-mature respectively. Winter was the primary season of crop raiding as both sugarcane

and wheat were cultivate together in crop fields during this time. Raids were most frequent

during the period of 9 pm to 12 am. We observed that 64.7% and 85.3% of settlements under

regular crop raid surveyed (N=34) were situated within 500 m and 1 km from the RNP

boundary respectively. Though 80% and 96.7% of respondents opined that elephants were

major causes of crop damage and were threats to personal safety, 91.1% interviewee thought

that elephants should be protected. The most frequent reason cited for this attitude was that the

forests adjoining the crop field were natural habitat of elephants who had been and should

continue to remain there.

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1. INTRODUCTION:

The Asian elephants Elephas maximus have been obliterated from 95% of their

historic range (Sukumar 2006) whereas, in India, their geographic distribution has shrunk

by 70% since 1960s (Ministry of Environment and Forest, Government of India 2011).

The Asian elephant is enlisted as ‘Endangered’ by IUCN, is placed on ‘Appendix 1’ of

CITES and is a ‘Schedule I’ species as per The Wildlife (Protection) Act, 1972 of India.

Once widespread in India, the species has retreated to four general areas: north-eastern

India, central India, north-western India, and southern India (Choudhury et al. 2008)

with total population ranging around 21200 (Rangarajan et al. 2010). 32 existing as well

as proposed Elephant Reserves, spanning 65000 sq. km., have been delineated under the

aegis of Project Elephant commissioned in 1992 (Rangarajan et al. 2010)

Rajaji National Park (RNP), Corbett Tiger Reserve (CTR) and the proximate forests

in north-western India constitute Shivalik Elephant Reserve with a population of around 1510

(Rangarajan et al. 2010) elephants which is also the westernmost Asian elephant poplation.

Human population around RNP alone has increased twofold during past decade (Joshi

and Singh 2008). The habitat is under severe anthropogenic pressure in the form of land use

changes, overgrazing, tree lopping and construction of rail tracks, roads and especially the

Chilla power canal (Johnsingh and Joshua 1994). The once continuous elephant distribution

in the states of Uttar Pradesh and Uttarakhand (from Katerniaghat in Bahraich forest

division in the east to river Yamuna in the Shivalik forest division in the west) has been

fragmented into 5 isolated populations (Johnsingh 1993). The dispersal of elephants has

been restricted to a great extent (Johnsingh 1993; Joshi and Singh 2008). Theoretical

predictions (e.g. Wright 1969; Varvio et al. 1986) as well as several studies (e.g.

Frankham 1996; Young et al. 2000; Johansson et al.. 2005) suggest that populations

dwelling in such fragmented landscapes would suffer from low genetic variability and

reduced mean fitness. The elephant populations of north-west India are shown to share

similar haplotypes with the north-eastern populations by Vidya et al. (2005b). Thus

maintaining genetic diversity of elephants in the study area is also important to attempt

‘genetic rescue’ (if required) in elephant populations of north-east India in view of increasing

fragmentation of elephant habitats.

Thorough information on population genetic structure and the distinctiveness of

populations are imperative for management of a threatened animal species (Avise 1995).

Use of genetic tools provides understanding of behaviour, evolution, and helps devising

conservation strategies for large social animals like elephants (Archie and Chiyo 2012).

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Tracking movement patterns through direct observation, radio-telemetry or through

mark- recapture models may prove futile for large animals like elephants as dispersal events

persist for negligible time period relative to their life span hence may easily be missed

during observation and cost associated is always high. On the other hand, molecular

techniques involving non-invasive genetic sampling using dung or faecal matter are capable of

indirectly examining gene flow and substructures of elephant populations in a cost and time

effective manner. Such techniques, even in the absence of long term monitoring, can reveal

information on social organisation of the elephant herds by calculating genetic relatedness of

the members (e.g. Vidya and Sukumar 2005a, Chakraborty et al. 2014).

On the other hand, varying degrees of crop depredation by elephants are common

across their present range in Asia wherever habitat degradation and fragmentation leads to

elevated interaction between elephants and agriculture (Sukumar 1990, 2006; Williams et al.

2001). Crop raiding by elephants is recognized as a major challenge to elephant conservation

(Sitati et al. 2003). Competition for natural resources like food, water and space between

elephants and humans results in loss and fragmentation of wild habitat causing elephant to

stray out of the forests raiding crop fields, damaging property, injuring and killing humans

and livestock (Sukumar 1994; Karanth and Madhusudan 2002; Datta Roy 2003; Bipin 2010).

Elephants damage 0.8 to 1 million hectares of croplands annually (Bist 2002). On an average,

nearly 400 human casualties of elephant invasion are reported per year while about 100

elephants are killed by villagers in retaliation (Rangarajan et al. 2010).

To develop a practicable strategy for management of crop depredation, precise

information on temporal and spatial occupancy in relation to sex and age structure and on

number of crop raiding elephants, raiding patterns in terms of sex and age of raiders, foraging

patterns in terms of season and type of crop raided by individual elephants, group

composition of raiders as well as incidences of habitual recurrent raiding are of utmost

importance (Chiyo and Cochrane 2005; Chiyo et al. 2011a).

The current study of three years, therefore, has been undertaken to address the conservation

issues mentioned though a multidisciplinary approach involving ecology, molecular genetics and

geospatial tools.

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2. OBJECTIVES:

The current study aims to conduct a thorough non-invasive genetic sampling of the

elephants of north-west India in order to study patterns of spatial and temporal occupancy in

relation to habitat characteristics and crop raiding patterns and genetic variations using

mitochondrial DNA sequences and nuclear microsatellite polymorphisms which would, in turn

allow us to examine genetic diversity, relatedness amongst individuals and herds, population sub-

structures, gene flow and phylogeography of the north-west Indian elephant population.

Population units will also be identified aiding conservation and management initiatives. The

specific objectives of the ongoing study are listed as follows:

i. Estimation and modelling of spatial and temporal habitat occupancy of elephants.

ii. To provide base line genetic structure information using mtDNA and nuclear microsatellite

variations across different populations,

iii. Identification of any patterns in dispersal in terms of age and sex of the elephant individuals,

iv. To document and test for population genetic differentiation and a recent bottleneck, if any,

v. To examine existence of any age/sex based patterns of crop depredation and incidences of

habitual raiding in relation to cropping patterns, and

vi. To study social organisation of Asian elephants.

In order to meet the project objectives, partial funding of Rs. 2,00,000 (US$ 3141) was

accorded by WWF-Nepal for carrying out field work vide Grant Agreement #WU 04 for 2014-

2015

3. STUDY AREA:

During 2014-2015, the study was conducted in the Rajaji National Park (RNP) and the

adjoining forest areas, including Dehradun, Haridwar and Lansdowne Forest Divisions.

Rajaji National Park (RNP) is located between 29º 15' N to 30º 31' N and 77º 52' E to

78º 22' E across the districts of Haridwar, Dehradun and Pauri Garhwal of the state

Uttarankhand in northern India. Total area of the park is 821 sq. km. It is limited in the west

by Delhi-Dehradun highway and is contiguous with Lansdowne Forest Division in the east.

To the south, it extends up to the agricultural lands that open up in the Gangetic plains while

to the north the park extends up to the base of Shivalik hills that meet the Doon valley. The

river Ganges divides RNP into two portions as it flows through the Park for about 20 km. The

eastern portion of the park is comprised of the former Rajaji and Motichur Wildlife

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Sanctuaries while the western portion includes former Chilla Wildlife Sanctuary merged to

form the national park in 1983.

Figure 1: Distribution of different protected areas for the present study in Terai Arc Landscape.

The vegetation of RNP is mainly composed of heterogeneous deciduous species of

tropical and sub-tropical origin, a typical characteristic of central Sub-Himalayan tract with

an average annual rainfall of about 1200 mm.

A total of 49 mammal species are known to occur in RNP including Asian elephant

(Elephas maximus), sambar (Rusa unicolor), chital (Axis axis), muntjak (Muntiacus muntjak),

nilgai (Boselaphus tragocamelus), wild pig (Sus scrofa), tiger (Panthera tigris), and leopard

(Panthera pardus). The avifauna of RNP is rich with 312 species, out of which 144 species

are residents, 89 are migrants, 53 are altitudinal migrants and 8 species are local migrants.

The reptilian fauna of the park includes 9 species of lizards belonging to 5 families and 28

species of snakes of 11 families. There are three communities living inside the park - the

Gujjar, the Taungya and the Gothia. There are several villages around the national park those

are dependent on the forest resources of the park.

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4. WORK ACCOMPLISHED: 4.1. Collection of faecal matter for non-invasive genetic sampling:

During the period of June 2014 and March 2015, we collected geo-referenced faecal samples

by tracking and following elephant bulls and cow herds. We have also collected fresh faecal

samples upon opportunistic encounter whenever possible. We have sampled a total of 817

elephant dung boluses in the period between 25-06-2014 and 31-03-2015 from the study area

(Fig. 2). Out of these, 558 samples (68.3%) were collected by tracking bulls and cow herds while

the rest (31.7%) were collected on opportunistic basis.

Figure 2. Locations of faecal samples collected between June 2014 and March 2015.

Number of male individuals sampled were 95 (17%) whereas female individuals sampled

were 452 (81%). Sex could not be determined upon sighting for 11 calves (2%) (Fig. 3). Based

on observational classification using relative shoulder height, skin folds and pigmentation,

number of samples taken from calves, sub-adults, adults and old animals were 41 (7.3%), 86

(15.4%), 231 (41.4%) and 200 (35.9%) respectively (Fig. 4). Age classes were unknown for 259

samples which were collected opportunistically upon encounter. Data on group sizes were

recorded upon encounter (N=215) which, besides single individuals (35.3%), group size ranged

from herds of 2 to 16 individuals, with a group size of 5 to 7 being most common (percent

frequency of encounter 53.2%) and group size of 11 to 13 and 13 to 16 being least common

(percent frequency of encounter 1.4% each) (Fig. 5). We calculated mean group sizes in distance

classes having an increment of 1 km from protected area (PA) boundary both inside and outside

PA. Mean group sizes across distance classes varied from 5.2 (2 to 3 km inside PA) to 8 (5-6 km

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inside PA) though there were no significant differences between mean group sizes across distance

classes (χ2=1.83, df=13, p>0.01) (Fig. 6).

Figure 3. Percent distribution of confirmed male and females in faecal samples collected from Rajaji National Park and adjoining areas during 2014-2015

Figure 4. Percent distribution of age classes in faecal samples collected from Rajaji National Park and adjoining areas during 2014-2015

0

10

20

30

40

50

60

70

80

90

100

Male Female Undetermined (Calves)

% Sam

ples

0

10

20

30

40

50

60

70

80

90

100

Calf Sub‐adult Adult Old

Percentage occurren

ce

Age Class

n=559

n=559

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Figure 5. Percent distribution of group size classes as inferred from direct sightings of elephant herds in Rajaji National Park and adjoining areas during 2014-2015. .

Figure 6. Group sizes across distance classes from PA boundary as inferred from direct sightings of elephant herds in Rajaji National Park and adjoining areas during 2014-2015.

0

10

20

30

40

50

60

70

80

90

100

2 to 4 5 to 7 8 to 10 11 to 13 14 to 16

Group Size

Percentage occurren

ce

n=215

0

1

2

3

4

5

6

7

8

9

>7 km 6‐7km

5‐6km

4‐5km

3‐4km

2‐3km

1‐2km

0‐1km

0‐1km

1‐2km

2‐3km

3‐4km

4‐5km

5‐6km

6‐7km

>7 km

Distance Classes

Meangroup size

n=215

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Forest range wise distribution of samples are provided in Table 1.

Table 1: Distribution of collected faecal samples across different ranges collected from Rajaji National Park and adjoining areas during 2014-2015 S. No. Forest Division Forest Ranges No. Of Samples 1 Dehradun

Lacchiwala 1

Rishikesh 3 2

Haridwar

Chidiapur 67

Khanpur 2

Shyampur 212 3

Lansdowne

Kotdwar 9

Kotari 2 Laldhang 4

5

Rajaji National Park

Beribara 58

Chilla 227

Chillawali 28

Dholkhand 34

Gohri 6

Haridwar 126

Kansrao 15

Motichur 12

Ramgarh 3

Ranipur 6 6 Terai West Bailpadao 2 Total 817

.

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4.2. Distribution of solitary males and cow herds in relation to park boundary: We compared number of sighting records of both solitary bulls and cow herds in interval

classes having an increment of 1 km from protected area (PA) boundary both inside and outside

PA. We found significant difference between usage patterns in bulls and cow herds across

distance classes (χ2=52.83, df=12, p<0.01). There was significant difference between sighting

frequencies (including both bulls and cow herds) in different distance classes (χ2=108.84, df=13,

p<0.01) with the distance of 0-1 km inside PA being the zone of maximum encounter frequency

(25.3% for bulls, 20.7% for cow herds) (Fig. 7). Areas in vicinity of the PA boundary being used

by elephant frequently substantiates crop fields near RNP boundary having a very high rate of

crop raiding.

Figure 7. Encounter frequencies of solitary bulls and cow herds across distance classes from PA boundary as inferred from direct sightings of elephant herds in Rajaji National Park and adjoining areas during 2014-2015.

4.3. Standardization of faecal DNA extraction and amplification protocol: In order to reduce problems associated with non-invasive genetic sampling (Fernando et al.

2003) we modified a DNA extraction protocol standardized by Ball et al, (2007). We used

phosphate buffer saline (PBS) to rehydrate the surface layer of dried faecal samples (n=10)

including 2 fresh, 5 more than 5 month old and 3 fungus infested samples. Then we used

>7 km 6‐7km

5‐6km

4‐5km

3‐4km

2‐3km

1‐2km

0‐1km

0‐1km

1‐2km

2‐3km

3‐4km

4‐5km

5‐6km

6‐7km

>7 km

Solitary bulls Cow Herds

Distance Classes

Percentage ofoccurren

ce

30

25

20

15

10

5

0

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sterilized cotton swabs to lightly rub the surface to collect the intestinal mucosal layer taking

care to remove as less faecal material as possible. We used Qiagen DNeasy Blood and Tissue

kit to extract DNA from the swabs using manufacturer specified protocols.

To check for efficiency of the extraction protocol, we attempted to amplify a microsatellite

marker EMU11 (Kongrit et al. 2008) with a gradient of 2µL, 4µL, 6µL and 8µL of DNA

template in all the extracted DNA samples with positive and negative controls. We got positive

amplification in 7 samples, both fresh and old, except for 3 fungus infested samples in lane

number 4, 7 and 8while using 6 µL of DNA template (Fig. 8).

Figure 8: PCR products amplified using marker EMU11 and DNA template extracted using

standardized protocol from faecal samples collected from Rajaji National Park and adjoining

areas during 2014-2015. Lanes 1 and 2 contained extracts from fresh samples; lanes 3, 5, 6, 9

and 10 contained extracts from samples older than 2 months; lanes 4, 7 and 8 contained extracts

from fungus infested samples.

4.4. Identification and frequency distribution of alleles in north-west Indian Elephant landscape: To minimize genotyping errors such as false alleles and dropouts, it has been suggested to

document allele distribution being used from tissue samples for all the microsatellite markers. In

view of this, we used a total of 125 tissue and blood samples from tissue repository of Wildlife

Forensic Cell, Wildlife Institute of India, Dehradun to use for establishment of reference baseline

data for further analyses. We amplified 12 microsatellite loci (EMU3, EMU4, EMU6, EMU7,

EMU9, EMU10, EMU11, EMU12, EMU13, EMU14, EMU15 and EMU17) described by Kongrit

et al. (2008) upon 125 samples from all across the study area to identify the reference alleles in

each locus.

The allele sizes ranged from 94 bp to 169 bp and their frequency distribution has been shown

in Fig. 9.

1 2 3 4 5 6 7 8 9 10 +ve -ve

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Figure 9. Frequency distribution of alleles by locus in north-west Indian elephant population. Diameter of bubbles represent frequency of individual alleles. (No. of samples=125; No. of alleles=73).

90

100

110

120

130

140

150

160

170

Loci

Allele size

n=73

Locus 1 Locus 2    Locus 3    Locus 4   Locus 5   Locus 6     Locus 7    Locus 8    Locus 9  Locus 10   Locus 11   Locus 12    

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4.5. Identification of sex: A duplex reaction consisting of primer pairs Y53C/Y53D (Fein and Lemay 1995) and

EdlF/EdlR (Gupta et al. 2006) was amplified using faecal DNA templates at an annealing

temperature of 55°C in five replicates. The resulting products were electrophoresed on 2%

agarose gel for sex identification. The mitochondrial D loop region (EdlF/EdlR: 137bp) amplified

in both males and females; Y chromosome specific fragment (Y53C/Y53D: 202bp) amplified

only in males (Fig. 10). Consensus identification was used to assign sex to DNA samples.

Figure 10. Duplex reactions electrophoresed on 2% agarose.

4.6. Assessment of crop raiding patterns of elephants and attitude of farmers towards crop depredation: Along the boundary of Rajaji National Park, we selected 34 locations which could be

broadly categorized into 6 zones: 1. Southern boundary of western RNP, 2. Northern boundary

adjacent to Lacchiwala forest range, 3. Part of northern boundary between Lacchiwala and

Barkot borest Ranges, 4. Northern boundary adjacent to Barkot forest Range, 5. Southern

boundary of eastern part of RNP and 6. Along river Ganges (Fig. 11).

Figure 11. Locations and zones in which the questionnaire survey was carried out to assess extent of crop damage and perception of farmers during January-February 2015.

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We used a 28 point structured questionnaire survey (Appendix 1) in these 34 locations

interviewing 90 agriculture associated persons. A total of 35.6% percent of the interviewee were

illiterate, 29.9% and 31.1% received primary and education respectively, whereas 3.4% of the

respondents were graduate. 86.7% of the respondents reared cattle as an alternative source of

income.

4.6.1. Cropping pattern:

Out of total 11 combinations of 5 commercial crops cultivated in the area (paddy,

wheat, sugarcane, maize and mango), 8 combinations were practiced by more than 1 respondent

(Table 2). Mean number of crop raids reported during the questionnaire survey in these 8

combinations varied significantly from one another (χ2=141.83, df=7, p<0.01). Farmers

cultivating only sugarcane reported highest mean number of crop raids per year (107.5) followed

by the combination of sugarcane and wheat (96.44) (Fig. 12). The combination of paddy and

wheat encounter the least mean number of crop raid per year (19.55).

Table 2: Zone-wise distribution of number of responses to query regarding cropping pattern around Rajaji National Park during January-February 2015. Crop combinations Zones

1 2 3 4 5 6 Total Sugarcane 1 0 0 1 0 0 2 Wheat 0 0 2 0 0 0 2 Wheat-Mango 2 0 0 0 0 0 2 Wheat-Maize 6 0 1 0 0 0 7 Wheat-Sugarcane 6 3 1 0 0 0 10 Wheat-Sugarcane-Mango 1 0 0 0 0 0 1 Wheat-Sugarcane-Maize 4 1 0 0 1 0 6 Paddy-Wheat 2 1 1 6 0 17 27 Paddy-Wheat-Sugarcane 1 11 4 3 12 0 31 Paddy-Wheat-Sugarcane-Maize 0 1 0 0 0 0 1 Paddy-Sugarcane 0 0 0 1 0 0 1 Total 23 17 9 11 13 17 90

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Figure 12. Mean number of annual crop raids in major cropping combinations based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015.

4.6.2. Frequency of crop raids:

Average number of crop raids were 40 per year with responses varying from 2 to 150 raids

per year in their respective localities. Mean intensity of crop raids varied significantly between

the 6 sampled zones (χ2=84.14, df=5, p<0.01). Crop raiding intensity was highest at the southern

boundary of RNP followed by part of northern boundary proximate to Lacchiwala forest range

of Dehradun forest division (Fig. 13).

Figure 13. Zone-wise mean number of crop raids per year based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015.

0

20

40

60

80

100

120

Crop Combination

Mean no. of crop raids per year

Sugarcane Wheat          Wheat          Wheat           Wheat          Wheat          Paddy           Paddy      Mango          Maize         Sugarcane   Sugarcane      Wheat.         Wheat

Maize       Sugarcane

0

10

20

30

40

50

60

70

80

90

1 2 3 4 5 6

Zones

Mean no. of crop raids per year n=90

n=90

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4.6.3. Crop maturity during raid:

In order to detect any patterns of raids related to maturity of the crop, we enquired the

respondents regarding growth stages of crops being raided. For paddy, 58.6% respondents

informed that the crop is raided after attaining maturity. According to 74.7% of wheat farmers,

the crop fields were raided since the crop were semi-mature. A total of 58% of sugarcane farmers

responded that the crops were raided right from immature stage just after the stalks could be

grabbed by elephants by their trunks. Maize crops were reported to be raided by 66.7%

respondents when the crops are semi-mature (Fig. 14).

Figure 14. Percent responses to the maturity of crop when raided by elephants based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015.

4.6.4. Major seasons of crop raiding and time of raid:

To identify temporal patterns of crop raiding, the respondents were asked to identify

major seasons of crop raiding and the time of the day the raids are most frequent. Of the 90

respondents, 65.6% concurred that crop raiding was most frequent in winters while 21.1% and

13.3% interviewee responded that the season with most frequent crop raids were summer and

monsoon respectively (Fig. 15). When asked about the time of raid, 64.5% respondents said that

raids take place between 9 pm to 12 am, followed by 33.3% saying between 7 pm to 9 pm and

2.2% respondents saying the raids take place between 12 am to 5 pm (Fig. 16).

0

10

20

30

40

50

60

70

80

90

100

Paddy Wheat Sugarcane Maize

Immature Semi‐mature Mature

% Responses

n=90

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Figure 15. Percent responses to season during which crop raiding is most frequent based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015. .

Figure 16. Percent responses to time during which crop raiding is most frequent based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015. .

4.6.5. Spatial patterns of crop raiding: distances of raided settlements from Rajaji National Park

boundary:

We developed an index for quantifying number of raids and percentage crop loss per

year together henceforth termed as Raid Index (RI=fraction of maximum number of crop raids

per year × fraction of maximum percentage loss of crop per year × 100). We calculated mean

Raid Index for each of the 34 settlements surveyed and plotted them against distance of the

0

10

20

30

40

50

60

70

80

90

100

Winter Summer Monsoon

Major seasons of crop raiding

% responses

n=90

0

10

20

30

40

50

60

70

80

90

100

1900 to 2100 2101 to 0000 0001 to 0500

% responses

Time of raid, hours

n=90

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settlement from Rajaji National Park boundary (Fig. 17).

Figure 17. Raid Index plotted against distance of the settlements surveyed based on questionnaire survey carried out to assess extent of crop damage and perception of farmers during January-February 2015.

We found that 85.3% settlements (N=34) under crop raiding are within 1 km from the

park boundary whereas 64.7% of the settlements were less than 500 m from the boundary.

There was only 1 (2.9%) occasion where a settlement with Raid Index greater than 10 was

more than 1 km away from the boundary.

Therefore, we suggest that higher patrolling efforts may be made within 1 km from Rajaji

National Park boundary which lie under greater risk of crop raiding by elephants.

4.6.6. Attitude of the respondents towards crop raiding elephants:

We asked the respondents whether they thought elephants were the major cause of crop

damage. Eighty per cent of the respondents answered in positive while 20% said that other

animals like nilgai, wild pig, sambar, chital, macaque and parakeet chiefly harmed their crops

(Fig. 18). A total of 96.7% of interviewee considered crop raiding elephants were threat to their

personal safety (Fig. 19). Despite the risk of crop loss and insecurity regarding personal safety,

when asked whether wild elephants should be protected 91.1% of the respondents replied in

positive (Fig. 20). They reasons they provided for their opinion were categorised as 84.4% of

the interviewee saying that elephants should be protected as forests are their natural habitat

though their movement to crop fields must be restricted. Elephants were treated as deity by 4.4%

of the respondents and hence they opined for protection of elephants. Two respondents (2.2%)

thought that both forests and wildlife were government properties and harming them might cause

0

5

10

15

20

25

30

35

40

0 500 1000 1500 2000 2500 3000 3500 4000 4500

Raid index

n=34

Distance from RNP boundary, meters

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heavy penalties. Nine percent respondents who opined that elephant should not be protected

gave the reason that elephants cause economic and emotional loss to them through conflicts (Fig.

21).

Figure 18. Percent responses to whether crop raiding elephants are major causes of crop damage

based on questionnaire survey carried out to assess extent of crop damage and perception of

farmers during January-February 2015.

Figure 19. Percent responses to whether crop raiding elephants are threats to personal safety

based on questionnaire survey carried out to assess extent of crop damage and perception of

farmers during January-February 2015.

0

10

20

30

40

50

60

70

80

90

100

No Yes

% responses

Whether crop raiding elephants are major causes of crop damage

n=90

0

10

20

30

40

50

60

70

80

90

100

No Yes

% responses

Whether crop raiding elephants are threats to personal safety

n=90

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Figure 20. Percent responses to whether elephants should be protected based on questionnaire

survey carried out to assess extent of crop damage and perception of farmers during January-

February 2015.

Figure 21. Responses to the reasons for which elephants should/ should not be protected

based on questionnaire survey carried out to assess extent of crop damage and perception of

farmers during January-February 2015.

0

10

20

30

40

50

60

70

80

90

100

No Yes

Whether elephants should be  protected

% responses

n=90

84%

5%

2%

9%

Elephants should be protected because forests are their natural habitat

Elephants should be protected because elephants are considered as deity

Elephants should be protected because forests and wildlife are goventment property

Elephants should not be protected because of economic and emotional loss

n=90

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APPENDIX – 1

QUESTIONNAIRE FOR ASSESSING PERCEPTIONS REGARDING CROP RAIDING BY ELEPHANTS

1. Name of respondent: (Land owner/ Employee)

2. Age:

3. Education: None/ Primary /Secondary/ Graduate/ >Graduate

4. Size of household: (Adult: Children: )

5. Area of agricultural land held (approx.):

6. Major sources of income other than farming: Cattle rearing/Business/Others (Specify):

7. Usually cultivated crop: Paddy/Wheat/Sugarcane/ Maize/ Groundnut/ Others (Specify):

8. Usual number/ frequency of crop raids by elephants per year in the settlement:

9. Name of crop raided: Paddy/Wheat/Sugarcane/ Maize/ Others (Specify):

10. Currently cultivated crop: Paddy/Wheat/Sugarcane/ Maize/ Others (Specify):

11. Number/ frequency of crop raids during current cultivation in the settlement:

12. Name of crop raided in recent weeks: Paddy/Wheat/Sugarcane/ Maize/ Others (Specify):

13. Maturity of crop during raid in general:

Paddy Immature/ Semi-mature/ Mature Wheat Immature/ Semi-mature/ Mature Sugarcane Immature/ Semi-mature/ Mature Maize Immature/ Semi-mature/ Mature Others (Specify)

Immature/ Semi-mature/ Mature

14. Months during which crop raiding is most frequent:

15. Time of crop raids: Early evening (1900-2100)/ Late evening (2100-0000)/ Night (0000-0500)/ Other (Specify):

16. Herd size during raids: 1/ 2-4/ 5-7/ 7-9/ >9

17. Investment in farming per year: Rs.

18. Loss due to crop raiding by elephants per year: Rs.

Sl. No.: Name of Settlement: Date: / /201 No. of resident families:

Name of interviewer: Coordinates: ° ´ ´´N ° ´ ´´E Time: AM/PM

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Signature of the interviewer:

Patterns of spatial and temporal habitat occupancy in relation to crop raiding behaviour and genetic variation of free-ranging Asian elephants (Elephas maximus) in north-west India using non-invasive genetic sampling

19. Method(s) used for preventing/mitigating elephant invasion: Sound/ Fire/ Flashing torchlights/ Stone pelting/ Trenches/ Walls/ Barbed or razor wire/ Others (Specify):

20. Whether the method/s is/are effective: Highly/ Moderately/ Scarcely/ Not effective

21. Investment in protection of crop/deterring elephants: Rs.

22. Administrative action for mitigating crop raiding: None/ Compensation (Amount: ) / Deterrent (Method/s: )/ Sensitization and education

23. Others methods that should be employed to control crop raiding in respondent’s opinion:

24. Other forms of elephant-human conflict present in vicinity: Human death/ Destruction of property/ Retaliatory killing of elephants/ Others (Specify):

25. Whether the respondent considers wild elephants to be pests and major cause of crop damage: No/ Yes

26. Whether the respondent considers wild elephants to be significant threat to personal safety: No/ Yes

27. Whether the respondent think that elephants should be protected: No/ Yes (Reasons):

28. Other animals involved in crop raiding in vicinity: Nilgai/ Wild Pig/ Sambar/ Chital/ Parakeet/ Macaque

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