nitrogen transformations in the southern california bight · ammonium and nitrite both occm: as...

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Deep-Sea Research, Vol. 34, Nos 5/6, pp. 785-805, 1987. [/198NII4W87 $3.00 + 0.00 Printed in Great Britain. © 1987 Pergamon Journals Ltd Nitrogen transformations in the Southern California Bight B. B. WARD* (Received 10 October 1985; in revised.form 10 January 1986; accepted 11t June 1986) Abstract--Oxidation and assimilation of ammonium and nitrate were measured in profilcs from the surface to 1000 m at four stations in the Southern California Bight. Assimilative processes dominated the turnover of these nitrogen compounds in the nutrient depleted photic zone: however, at the bottom of the photic zone, nitrification and assimilation were equally important in the turnover of both compounds. Although ammonium oxidation wits strongly inhibited by light in the surface samples, nitrification probably contributed to rapid nitrogen cycling within the photic zone. Assimilation of ammonium and nitrite, integrated over the photic zone, was about 3- fold greater than calculated regenerated production, estimated from 14C(-) 2 uptake measure- ments. Integrated nitrification rates below the photic zone usually exceeded new primary production estimates. Most ammonium oxidation occurred in a discrete maximum around the depth of 0.2% surface light intensity; rates within the maximum exceedcd rates in shallower and deeper samples by up to 80-fold. Nitrite oxidation rates exceeded ammonium oxidation rates, and did not display the prominent subsurface maximum found in the former. Abundance of both ammonium and nitrite oxidizing bacteria varied less with depth than did oxidation rates. Autotrophic activity of the nitrifiers, measured by ~4C-autoradiography combined with immuno- fluorescent counts, was minimal in the surface samples, and increased with depth, but was not directly correlated with nitrification rates, measured by ~SN techniques. INTRODUCTION AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the substrates for assimilation by phytoplankton and bacteria, and for oxidation by nitrifying bacteria. Nitrate, the end product of sequential ammonium and nitrite oxidation, represents the main flux of new nitrogen into the mixed layer. In the semi-closed nitrogen cycle of oligotrophic oceanic waters, the rate of nitrate supply to the photic zone, the rate of new primary production (DuGDALE and GOERING, 1967; EPPLEY and PETERSON, 1979) and the net depth integrated nitrification rate all should be roughly equivalent. The objectives of this study were to determine the distribution and magnitude of nitrification in the Southern California Bight, and to assess the role of ammonium and nitrite oxidation in nitrogen cycling and control of nutrient distributions in these oligotrophic waters. Measurements of nitrification rates and nitrogen assimilation rates are compared to estimates of new primary production. Recent measurements of nitrification in marine environments have shown that the distribution and magnitude of the rates are influenced by light (OLsoN, 1981a; WARD et al., 1984; LWSCHULTZ et aI., 1985; WARD, 1985) and by ammonium concentration (HAsI-tlMOTO et at., 1983; WARD et al., 1984). Laboratory work on cultures of nitrifying * Institute of Marine Resources, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093, U.S.A. 785

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Page 1: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Deep-Sea Research, Vol. 34, Nos 5/6, pp. 785-805, 1987. [/198NII4W87 $3.00 + 0.00 Printed in Great Britain. © 1987 Pergamon Journals Ltd

Nitrogen transformations in the Southern California Bight

B. B. WARD*

(Received 10 October 1985; in revised.form 10 January 1986; accepted 11t June 1986)

Abstract--Oxidation and assimilation of ammonium and nitrate were measured in profilcs from the surface to 1000 m at four stations in the Southern California Bight. Assimilative processes dominated the turnover of these nitrogen compounds in the nutrient depleted photic zone: however, at the bottom of the photic zone, nitrification and assimilation were equally important in the turnover of both compounds. Although ammonium oxidation wits strongly inhibited by light in the surface samples, nitrification probably contributed to rapid nitrogen cycling within the photic zone. Assimilation of ammonium and nitrite, integrated over the photic zone, was about 3- fold greater than calculated regenerated production, estimated from 14C(-) 2 uptake measure- ments. Integrated nitrification rates below the photic zone usually exceeded new primary production estimates. Most ammonium oxidation occurred in a discrete maximum around the depth of 0.2% surface light intensity; rates within the maximum exceedcd rates in shallower and deeper samples by up to 80-fold. Nitrite oxidation rates exceeded ammonium oxidation rates, and did not display the prominent subsurface maximum found in the former. Abundance of both ammonium and nitrite oxidizing bacteria varied less with depth than did oxidation rates. Autotrophic activity of the nitrifiers, measured by ~4C-autoradiography combined with immuno- fluorescent counts, was minimal in the surface samples, and increased with depth, but was not directly correlated with nitrification rates, measured by ~SN techniques.

INTRODUCTION

AMMONIUM and ni t r i te bo th occm: as i n t e r m e d i a t e s in the n i t rogen cycle in seawa te r . T h e s e c o m p o u n d s are i m p o r t a n t as the subs t r a t e s for ass imi la t ion by p h y t o p l a n k t o n and bac te r i a , and for ox ida t ion by ni t r i fy ing bac te r i a . N i t r a t e , the end p roduc t of sequen t i a l a m m o n i u m and ni t r i te ox ida t i on , r ep re sen t s the main flux of new n i t rogen into the mixed layer . In the semi -c losed n i t rogen cycle of o l i go t roph ic ocean ic wa te r s , the ra te of n i t ra te supply to the pho t i c zone , the ra te of new p r i m a r y p roduc t i on (DuGDALE and GOERING, 1967; EPPLEY and PETERSON, 1979) and the net dep th i n t e g ra t e d ni t r i f icat ion ra te all shou ld be roughly equ iva len t . The ob jec t ives of this s tudy were to d e t e r m i n e the d i s t r ibu t ion and m a g n i t u d e of n i t r i f ica t ion in the S o u t h e r n Ca l i fo rn ia Bight , and to assess the role of a m m o n i u m and ni t r i te ox ida t i on in n i t rogen cycl ing and con t ro l of nu t r i en t d i s t r ibu t ions in these o l i go t roph ic waters . M e a s u r e m e n t s of ni t r i f icat ion ra tes and n i t rogen ass imi la t ion ra tes a re c o m p a r e d to e s t ima tes of new p r ima ry p roduc t ion .

R e c e n t m e a s u r e m e n t s of ni t r i f icat ion in mar ine e n v i r o n m e n t s have shown that the d i s t r ibu t ion and m a g n i t u d e of the ra tes a re in f luenced by l ight (OLsoN, 1981a; WARD et al . , 1984; LWSCHULTZ et aI. , 1985; WARD, 1985) and by a m m o n i u m concen t r a t i on (HAsI-tlMOTO et a t . , 1983; WARD et al . , 1984). L a b o r a t o r y work on cu l tu res of n i t r i fy ing

* Institute of Marine Resources, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093, U.S.A.

785

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786 B.B. W,~RD

bacteria have demonstrated an effect of oxygen concentration on nitrification rates and the ratio of product formation that may be important in oxygen deficient envimnmems (GoREAU et al., 1980; Lwscnt3L.TZ et al., 1981). All three of these environmental variables may be important factors in influencing nitrification rates in the Southern California Bight.

The research described herein was motivated by several questions regarding nitrific~- tion and its role in the nitrogen cycle of the Southern California Bight: What is lllc magnitude and distribution of nitrification in surface and deep waters of this region? ltm~ do measured nitrification rates compare with other rate steps in the nitrogen cycle. including assimilation of ammonium and nitrite, and the overall balance betwecJ~ nitrification and new primary production? Does most nitrate regeneration occur in the water column or must deep ocean sediments be considered as potential major sites ~f nitrification? Does significant nitrification occur within the photic zone, and if so what are the implications for nitrate production within the nitracline as a supply of rapidly recirculating nitrate to the photic zone?

1 approached these questions with experiments at three deep stations (samples ~, 850 m) in the Southern California Bight by: (1) measuring the oxidation and assimilation; of both ammonium and nitrite; (2) determining the distribution of ammonium and nitrite-oxidizing bacteria by immunofluorescent enumeration; and (3) assessing by autoradiography the relative autotrophic assimilation of carbon by nitrifying bacteria. This approach yields several kinds of information on the distribution and activity of nitrifying bacteria, and permits the determination and comparison of rates of several steps in the nitrogen cycle.

M~. ] l l ( ) t ) s

Results from 2 cruises on the R.V. N e w Hor i zon in the Southern California Bight arc presented here. Stations 205 (33°18.7'N, 118°09.6'W) and TRPI (33°33.8'N. 118°27.3'W) were occupied in November 1982 and Stas 206 (33°07.7'N, 118°32,0'W) and TRP3 (33°30.8'N, 118°25.0'W) in May 1983. All 4 stations are located over senu. enclosed basins in the California borderland in depths of 800-1250 m (Fig. 1). Samples were collected at wide depth intervals in 30 t Niskin bottles, At each depth, aliquots for 15N and 14C incubation experiments, nutrients, oxygen and immunofluorescent enumc ration were obtained from the same Niskin sampler. Nutrient samples were filtered through GF/F flters, frozen and analyzed by standard methods (SI"mCKLA~D and PARSONS, 1972) after the cruise. Chlorophyll a was measured at sea using the fluor~, metric method of HOLM-HANsEN et al. (1965). Dissolved oxygen concentrations were measured using the Winkler titration method of BRYAN et al. (1976). Particulate nitrogen and carbon were determined on a Hewlett Packard C/H/N analyzer (SHAm', 1974)~ Nonparametric statistical methods (TATE and CLELI,AND, 1957) were used to analyze the immunofluorescence and autoradiography results where noted in the results section below.

lSN Tracer experiments"

Four Pyrex incubation bottles were filled with 4 1 of water from each depth. Two bottles were supplemented with 0.2/aM (JSNH4)2SO ~ (99 at.-% 15N) and 0.25 jaM Na~4NO2, and two bottles were supplemented with 0.2 ~tM Na~SNO~ and 0.25 I-tM

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Nitrogen transformations in the Southern California Bight 787

121°W 120 ° 119 ° 118 ° 117 °

34°N

Fig. 1.

33 °

Map of the Southern California Bight, showing stations locations occupied during SCBS-21 (205 and TRP) and SCBS-22 (206 and TRP3).

KI4NO3 (except for deep water where NO3 was plentiful). Samples were incubated in running seawater incubators at surface seawater temperature at simulated in situ light intensities. Incubations were terminated after 24 h by filtration through baked GF/F filters. Procedures for isotope ratio analysis of particulate and soluble (nitrite and nitrate) nitrogen fractions were described previously (OLSON, 1981a; WARD et al., 1984). Nitrite was extracted at sea while filtrates for nitrate analysis were frozen and returned to the lab. Thawed samples were first run through a large Cd-Cu reduction column and the resulting nitrite extracted as described previously (OLSON, 1981a; WARD et at., 1984). The 15N:~4N ratios of nitrite and nitrate in the resulting extracts were determined on a JASCO emission spectrometer after combustion using a modified micro-Dumas proce- dure (BARSDATE and DUGDALE, 1965).

All samples were incubated in replicate and 2 4 replicate isotope ratio determinations were made of subsamples of each filter or extract. The measured ratios from subsamples of the same filter were generally within 2-10% ; differences between replicate incubations were small for nitrogen assimilation into the particulate fraction, but varied by more than 100% in a few nitrate samples analyzed for nitrite oxidation (see Results). Standards were prepared from the tracer solutions and treated identically to the samples; standard deviations of replicate isotope ratio determinations were 2-5% of the mean when the isotope ratio was 10% or less. Samples filtered and processed immediately after tracer additions were used as blanks for calculating subsequent at.-% enrichments in the particulate and soluble pools after incubation. The equations of DUGDALE and GOERING (1967) were used for rate calculations except where mentioned below (see Results).

Immunofluorescent enumeration and autoradiography

Antisera produced in response to immunization with the following bacterial strains were used in this study: ammonium oxidizing species Nitrosococcus oceanus and Nitrosomonas sp. (marine) nitrite oxidizing speciesNitrobactersp. (marine) andNitrococcus mobilis. Although cells identified as reacting with these sera cannot be unequivocally

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788 B.B. WARD

identified to species, specificity testing of these s e r a (WARD and CArLtJucl, !9851 indicates that the sera are genus specific. Thus, the cells enumerated in this study z~re referred to as belonging to a particular genus, rather than a species. Samples were preserved in formalin (2% final concentration) and stained with immunofluoresccnt reagents by methods previously described (WARD, 1982: WARD and CA~<I_t~:l, 1985i, Cells were enumerated with a Zeiss fluorescent microscope at × 125(L using a 100 W tungsten halogen bulb and Zeiss filter set No. 487709. Three or more replicates at each depth were stained with each antiserum so that each genus was enumerated on separate sets of replicate slides.

At Sta. 205, 14CO 2 tracer experiments were performed in parallel to the ~N experiments described above. Tracer solution (25.6 laCi of NaHI4CO3) was added ~t~ 250 ml samples, which were incubated under the same conditions as the ~SN samples. Incubations were terminated after 24 h by the addition of formalin (2% linal concent- ration). Five days later, the preserved samples were filtered, washed twice with filtered seawater and twice with NH4COOH (0.6 M), and stored in desiccators until analysi.~. Autoradiograms were prepared from the filters using the emulsion dipping method described by WArD (1984). Minor modifications in the method included the use of gelatin to precoat the slides before attaching the filters and drying the emulsion after devclup- ment at room temperature. Exposure of 3 weeks was required to obtain optimal signai- to-noise ratio in the developed silver grains. Autoradiograms were microscopically analyzed using the system described above, except that transmitted light was used simultaneously with epifluorescent illumination (WARD, 1984). Each nitrifying genus was enumerated on separate replicate slides and background development was determined for each individual slide.

RESt I.1 S

The sampling scheme under which these data were collected consisted of: 8 or 9 depths at each station, four in the photic zone and the rest spaced at 100-200 m interwds ~, within 50 or 100 m of the bottom. Additional samples collected during CTD-rosette c~tsts have been included in the nutrient and chlorophyll data presented here.

Distribution Of" nutrients and biological parameters

Nutrient and oxygen distributions are presented in Fig. 2. All stations were character-. ized by a nutrient depleted surface layer, defined most clearly in the nitrate distributioll. The nitracline occurred between the 35 and 80 m samples during both cruises. Temper~, ture (not plotted) is predictably correlated with nitrate concentration, and thus the nitracline generally defines the thermocline in these waters (CuLI.EN e t al., 1983: STRICKLAND, 1970). Ammonium concentrations were low; highest concentrations, aboul 0.5 taM, were found at Sta. TRP. At the other three stations, ammonium was usually <0.1 taM (Fig. 2A), and was undetectable at Stas 206 and TRP3 except at a few depths (35 m at 206, 80 m at TRP3). Nitrite concentrations were also low; subsurface maxima of about 0.1 taM were clearly seen at Stas 205 and TRP, but were not observed at the May stations, 206 and TRP3. Oxygen was saturated in the surface layer and decreased with depth to <1 ml 1 -~ in the deepest samples.

Chlorophyll a and particulate nitrogen were largely restricted to the photic zone (Fig. 3). Chlorophyll a was usually <1 lag-at. 1 -~ and exhibited a subsurface maximum ~t

Page 5: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 789

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OXYGEN (ml'l -I) • I I I I I

0 .I 0 .I " .2 .3 N I T R I T E (M.M)

Fig. 2. (A) NH~ and NO~ (concentrations in laM) distributions at Stas 205 and TRP. Q, NO2, ©, NH4L (B) NO~ (laM) and oxygen (ml 14) at 4 stations; NO2 (laM) at Stas 206 and TRP3.

Page 6: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

790 g.B. WARD

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the 1.0% light level. A broader, but coincident, subsurface maximum m pamcula tc nitrogen was often observed: particulate nitrogen concentrations in the maximum were about 1.5 gM decreasing to a constant concentration of 0.5 I, tM in the deep watc~.

Depth distributions of ammonium oxidizing bacteria (2 genera) and nitrite oxidizing bacter,a (2 genera) are shown for Stas 206 and TRP3 in Fig. 4. (Results for Sla. 205 can be found in WARD and (7,.'\RLtJ('('I, 1985.) The coefficient of variation for rcplica~v immunofluorescent counts averaged 35%: thus many of the apparent variations m nitrifying bacterial abundances with depth are not significant. Ammon ium oxidizers were enriched in the surface samples at Stas 205 and 206. Aside from the surface enrichmen! total ammonium oxidizer abundances were low in the photic zone; maximum ccli numbers were found in the 80-150 m (1-(I. 1% light depth) samples at all three stations, At Sta. 21t6, the distributions of Nitrosomonas and Nitrosococcus were parallel through out the water column, except in the shallowest photic zone samples. At Sta. TRP3. Nitrosomonas was nearly constant over a large part of the water column and Nitrosoco~ cus varied by a factor of 9 from the maximum at 8(>-200 m to the minimum at 600 m. Average abundance of ammonium oxidizing cells was highest at Sta. TRP3 (average ovc~ the entire water column = 4.48 __+ 1.55 × 105 cells l-J). The average of ammonium oxidizers at Sta. 206, 1.88 _+ 0.53 × 105 , was significantly lower than at Sta. TRP3 (P < 0.115). The average abundance at Sta. 205, 3.51t _+ 0.86 × 105, was intermediate and not significantly different from Sta. TRP3.

Nitrite oxidizing bacterial abundances varied little with depth at Stas 205, 2116 and TRP3, but there was a trend of decreasing numbers with increasing depth at Stas TRP3 and 206. At these two stations, Nitrococcus was more variable than Nitrobacter (data for Nitrobacter less complete) , and significant abundance differences (P < 0./15) we, re

Page 7: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 791

Fig. 4.

AMMONIUM-OXIDIZING BACTERIA

200 I ,,,~/./. )

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++fi' I ' )!i i ,OOOoL~, ,_ l ; ; , o 2 ,, + 8 " r I - n NITRITE-OXIDIZING BACTERIA

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Abundances of nitrifying bacteria [cells I L ( x 105)] at Stas 206 and TRP3. Top panel, ammonium oxidizers; bottom panel, nitrite oxidizers.

detected between Nitrobacter and Nitrococcus at the depths denoted in Fig. 4. Nitrite oxidizers were significantly less abundant than ammonium oxidizers at Sta. TRP3, while at Stas 206 and 205, the average numbers of ammonium and nitrite oxidizers were very similar. Both ammonium and nitrite oxidizers were significantly less abundant (P < 0.05) at Sta. 206 than at 205.

Nitrification rates

Kinetic experiments. Experiments designed to investigate the effect of increased substrate concentrations on nitrification rates were carried out on the May 1983 cruise at Sta. TRP1 for ammonium and TRP5 for nitrite (Fig. 1). For both ammonium and nitrite, 4 tracer additions varying from 0.02 to 0.8 pM were made in replicate to 4 I bottles filled with samples collected from 200 m. Ammonium oxidation rate showed no correlation

Page 8: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

792 B.B. WARD

with added tracer concentration and averaged 0.243 (S.D. = 0.108) nmol l t d ' Similarly, nitrite oxidation rate did not correlate with added ~sNO: concentration, and averaged 0.319 (S.D. = (). 158) nmol 1 ~ d -j. These experiments were incubated for only 6 h, which contributes to the high variability (i.e. at.-% enrichments near the limi~ ~, detection). The standard tracer addition of 0.2 tam for the profile experiments described bek)w was chosen as being near the half-saturation constant of natural populations reported by other investigators (HAs~UMOTO eta/ . , 1983) and was a compromise minimum amount needed to detect the signal in 24 h or less. Results from these kinetic experi- ments imply that the measured oxidation rate was insensitive to tracer addition concern- rations over more than a 10-fold range. In previous work in the same region, O~(),~ (1981a) also observed no relationship between ammonium oxidation rate and substrata- additions up to 1.0 pM.

A m m o n i u m oxidation rates. Three reproducible features are evident in the ammonitm~ oxidation profiles presented in Fig. 5. Minimal, but nonzero, rates were found in the

Fig. 5.

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Dis t r ibut ion of ammon ium ox idat ion rates ( top panel) and ni tr i te ox idat ion rates (bo t tom panel).

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Nitrogen transformations in the Southern California Bight 793

surface samples. A subsurface maximum was observed at all stations. Although the maximum always occurred in the 0.2% surface light bottle, sample spacing was inade- quate to precisely define the shape of the distribution in this region. The rate maximum occurred at the same depth as the primary nitrite maximum at the two stations where this feature was evident. Below the maximum, ammonium oxidation rates decreased sharply with depth to a low, fairly constant rate. The maximum ranged from about 9 times (at Stas 205 and 206) to 80 times (Sta. TRP3) greater than the average rate of all depths below the maximum. Considerable variation in absolute rates was observed among stations; the rates in the subsurface maximum at Stas TRP3 and 205 were 36 and 45 nmol 1 i d i respectively, while at Sta. 206, the maximum rate was only 2.3 nmol 1 1 d i. A seasonal effect does not explain the difference, since 206 and TRP3 were sampled within a few days of each other in May, while 205 was sampled in November. The sample distribution at 206 may have missed the real maximum, given the apparent sharpness of this feature at other stations.

Ammonium oxidation rates varied over the water column much more than the abundance of ammonium oxidizing bacteria. The largest depth variation in bacterial abundance was found at Sta. TRP3, where Nitrosococcus (and therefore total ammo- nium oxidizers) exhibited a subphotic zone maximum that exceeded the minimum abundance at 600 m by a factor of 9. While the two maxima coincide, the maximum in Nitrosococcus abundance was broader than the rate maximum, and the factor by which the rate maximum exceeded the average deep rate was 80. The differences in ammonium oxidation rates among stations can only partially be attributed to differences in bacterial numbers. Highest rates were found at Sta. 205; highest numbers were found at Sta. TRP3, and Sta. 206 had both the lowest oxidation rates and the lowest abundances of ammonium oxidizing bacteria. At depths where detectable ammonium oxidation occurred, per cell rates varied from <1.0 to over 1000 × 10 i~, tool cell -I d -I . Highest per cell rates occurred in the subsurface oxidation rate maximum at Sta. 205. Lowest per cell rates always occurred in the surface samples.

Turnover of the ammonium pool due to its oxidation had a depth distribution (not shown) very similar to the distribution of the ammonium oxidation rate. In the vicinity of the subsurface maximum, oxidation accounted for 20-60% of the daily turnover. Ammonium oxidation accounted for nitrite production equivalent to 10-60% of the nitrite concentration in the subsurface nitrite maximum per day.

Nitrite oxidation. Two approaches were used to calculate nitrite oxidation rates (see Discussion). The results plotted in Fig. 5 were obtained using equations analogous to DUGDALE and GOERING (1967) for consistency with the ammonium oxidation results. Profiles of nitrite oxidation rates are less complete and do not show consistent patterns with depth. At the two stations where results were obtained from surface samples, high rates were measured in these samples. High nitrite oxidation rates were found deeper in the water column but no distinct subsurface maximum analogous to that for ammonium oxidation was found. Measured nitrite oxidation rates generally exceeded measured ammonium oxidation rates in the deep water, by 2-40 times. As discussed below, rates calculated by the equations of GLmERT et al. (1982a) give even higher results.

Although nitrite oxidation rates exhibited less consistency among stations than did ammonium oxidation rates, values at depths where detectable rates were measured varied by a factor of 10, compared to a factor of 80 for ammonium oxidation. Nitrite oxidation rates did not correlate directly with nitrite oxidizing bacterial abundance, and

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794 B.B. WARD

as in the case for ammonium oxidation, the variability in rates exceeded that in bacterial numbers. Per cell nitrite oxidation rates varied from 15 to 5000 x 10 " 'M cell ~ d Omitting the surface samples where photo-oxidation is implied (see Discussion), highest per cell rates coincided with highest per volume rates and were found in samples from 400 m and deeper.

Measured nitrite oxidation rates could account for turnover of the entire nitrite pool daily at some depths. The largest relative impact of nitrite oxidation on the nitrate pool was observed near the surface, where low nitrate concentrations could be greatly influenced by in situ nitrate production. In the nitracline, nitrite oxidation produced up to 33% of the standing nitrate concentration daily. At depth, nitrite oxidation contributed generally <0.05% per day to the deep nitrate reservoir.

A utotrophic activity ofnitrifving bacteria. ~4C-Carbon dioxide assimilation activity wa~ found associated with cells of both strains of ammonium oxidizers at tnost, but not all. depths (Fig. 6A). Due to loss of samples during processing, it was not always possible to count replicates. Where more than one replicate slide was analyzed for each strain, the range of replicate samples is plotted. The smoothed curves of activity distributions of the two strains both show near-surface minima; Nitrosornonas activity increased with depth while Nitrosococcus activity was nearly constant below 150 m.

It is possible to compute the product of relative activity per cell and cell number h~r each strain, to obtain a relative measure of total autotrophic activity associated with each strain. The sum total activities for Nitrosomonas and Nitrosococcus (Fig. 6B) i5 analogous to the total ammonium oxidation rate in that it should represent the activity ~t the total population. The distribution of ammonium oxidation rates (Fig. 5) ~md autotrophic activity (Fig. 6) by ammonium oxidizing bacteria have certain similarities but are not parallel. Both distributions are lowest in the near-surface waters, and increase t~ high rates below the mixed layer. However, the subsurface maximum in ammonium oxidation rate is not found in the total autotrophic activity, because the autotrophic

RELATIVE ACTIVITY PER CELL TOTAL ACTIVITY

2 0 0 i- # L ~ ~ ,"I. r ~ i / i ,,]li , " . . . . . . /v,'l~o~oco~s

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GRAINS PER CELL

Fig. 6. Autotrophic activity per Cell at Sta. 205 in arbitrary units of grains per cell: total activil5 in units of '(grains per cell) × (cells per liter × 105).

Page 11: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 795

activity remains high with increasing depth. The subsurface increases in ammonium oxidation rate and autotrophic activity are offset by at least 70 m, autotrophic activity being highest just below the maximum in oxidation rate. Although the general shape of the two distributions is similar, the two are not directly correlated because of the depth offset.

Data for autotrophic activity of nitrite oxidizers are less complete (not shown). Activity minima for both Nitrobacter and Nitrococcus were found in the surface waters, while activity comparable to that of the ammonium oxidizers was found both in a subsurface maximum and in the deeper samples.

A m m o n i u m and nitrite assimilation

Ammonium and nitrite assimilation patterns were similar among stations (Fig. 7). Highest assimilation rates were found in the three surface samples (i.e. at 12% or more surface light). Assimilation rates were more highly correlated with light intensity than with biomass (Chl a or particulate nitrogen) since the rate distributions did not exhibit subsurface maxima at the bottom of the photic zone. The vertical spacing of samples was not sufficient to precisely describe the distribution on small scales, but the general features of the profiles are evident.

Ammonium assimilation rates of 50 to over 100 nmol 1 ~ d -l were observed in surface samples, and significant rates (4-10 nmol 1-1 d -l) were measured in the 0.2% light bottles as well. In the dark samples, ammonium assimilation was fairly constant with depth, on the order of 1 nmol 1 -I d -1 or less. Measured ammonium assimilation rates imply that in situ processes could recycle the ambient ammonium pool up to several times per day in the photic zone.

Nitrite assimilation rates were lower than ammonium assimilation rates, and although they showed a similar photic zone distribution, nitrite assimilation had decreased to its low deep water level in the 0.2% light sample, Nitrite assimilation below the photic zone

0

200

Fig. 7.

"E 400 "c

I-- (3_ UJ

c~ 600

800

'4~0

205 TRP 206 I I ~ I 1 i I I

8'0 o 4'0 8'o o 20 8'o NITROGEN ASSIMILATION RATE (nM.d -I)

TRP3 I 0 I 1 I

2 40

Distribution of ammonium assimilation rates (©) and nitrite assimilation rates (O).

Page 12: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

796 B.B. War.

O[ . . . . . ~ i • ~- ",NO- ~ T - - ~ - ...... b - - " S 1 : L • L , - - + J

r ~ i i ,

zoo~ \ l " ~ ~ : ~ ! ~ ! - i ~'\ j - + - i + - + NO 2 H 4 NO 2 i 4 I NO 2 H 4

~4 H i \ ~ ," / ' \ i / / soo) !" i !', 7 /

--I- 205 ~ TRP , 206 i TRP3 l O 0 0 1 ~ . t k . J . _~__.L _J t __L J i L.-- i _ J _.; ± _.L_ _ t ' . . ~ _ ~ .i ; J .....

-2 0 2 -2 0 2 --2 0 2 -2 0 E ,4

E 4 0 0

t l--- n IJ.J

600

tOgloRATI 0 ( assimilation rate ) oxidation rate

Fig. 8. Re la t ive i m p o r t a n c e o l assimilal ion and oxidat ion of a m m o n i u m and nitri te expressed as ih¢ Iogw rat io (ass imila t ion t a lc /ox ida t ion ra te) .

was undetectable at Sta. 21)6 but was low and nonzero, about 0.1 nmol I t d t or less, at the other three stations. Turnover of nitrite due to its assimilation was significant only m the photic zone, and occurred there at a rnaximum rate of less than once per day.

Nutrient turnover and nitrogen fluxes

The relative contributions of assimilation and oxidation processes to fluxes into and out of the ammonium and nitrite pools can be estimated by computing the ratio (assimilation rate/oxidation rate) for each nutrient at each station (Fig. 8). The distribu- tion of these ratios with depth is similar at all stations, showing predominance of the assimilatory process in the photic zone, and increasing importance of oxidation with depth. Plotted as the logm of the ratio, the values below zero indicate oxidation rates greater than assimilation rates. For ammonium, assimilation and oxidation were of the same order below the photic zone except at Sta. 205, where oxidation became signifi- cantly more important between the 12% and the 0.2% light samples. For nitrite, this crossover occurred within the photic zone, where oxidation, either photochemical o~ biological, predominated. In the vicinity of the nitracline, nitrite oxidation and nitrite assimilation are on the same order. The oxidation of nitrite in this depth range implies an in situ production term for nitrate that may be significant to the nitrogenous nutrition ol phytoplankton at the bottom of the photic zone.

D I S C U S S I O N

Tracer experiments and rate calculations

The absolute values obtained for rate measurements made using kSN tracer techniques are highly dependent upon the equations and assumptions involved in the calculations

Page 13: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 797

once the isotope data are obtained (CAPERON et al., 1979; GLIBERT et al., 1982a, 1985; GARSIDE and GLmERT, 1984; GARSIDE, 1984; LAWS, 1984). I did not measure the isotopic composition of the ammonium pool, and therefore was constrained to use the equations of DUGDALE and GOERIN6 (1967) for calculation of ammonium oxidation and ammonium assimilation rates. The potential for error and underestimation of rates due to this procedure has been discussed (see above references). However, the error in ammonium concentration measurement alone in the oceanic waters where these experiments were performed would introduce as large an error into the regeneration calculations, and propagation of this error in the calculations is such that the precision of the rate estimates would not be substantially improved, Thus, these rates may be considered as underesti- mates; GLIBERT et al. (1982a) suggested that this error would lead to estimates about 2- fold lower than assimilation and oxidation rates measured by methods including the consideration of ammonium regeneration.

For the 15NO~ oxidation experiments on the May 1983 cruise, however, I did measure the isotopic content of both the nitrite and nitrate pools. This allowed me to calculate nitrite oxidation rates by two different methods using equations from (l) DV~DAL~: and GOERING (1967) and (2) GUBERT et al. (1982a). In the former equation, the isotopic content of the substrate pool is considered to be constant with time and the initial ratio is used as the divisor in the equation. In the latter case, the isotopic ratio of the substrate pool is assumed to decrease exponentially from the initial to the final value during the course of the experiment and an exponential mean is used for the isotopic content of the substrate pool. Calculations based on the hitter assumptions produced consistently higher results, the difference being a factor of 2.65 (S.D. = 0.33) at Sta. TRP3 and 2.89 (S.D. = 0.64) at Sta. 206. From other considerations (see below) it appears that rates based on both calculations are overestimates of the overall nitrification rate.

Computation of mass balances was not attempted with these experiments. The sum of measured rates was never sufficient to result in complete consumption of the added tracer, and in all but a few cases, depleted the initial substrate concentration (ambient plus tracer) by <:50%. The relative magnitude of oxidation and assimilation implies that both must be included when making mass balance calculations in tracer experiments (LAws, 1984; GLmERT et al., 1985).

Distribution o f rate processes

Ammonium oxidation exhibited consistent distribution patterns at the 3 stations where rate measurements were made. The three features of the pattern were negligible rates at the surface, increasing within the photic zone to a sharp maximum near the bottom of the photic zone, and low fairly constant rates below the maximum. Closer sample spacing would add detail, but the main features appear reasonable and consistent with both the limited number of previous observations and with the general picture of the distribution and controls on ammonium oxidizing bacterial activity. The minimum in ammonium oxidation rate at the surface is probably due to light inhibition. Ammonium oxidizing bacteria are light sensitive in culture (MULLER-NEUGLUCK and ENGEL, 1961; BOCK, 1965; HORRIGAN et al., 1981; YOSHIOKA and SAIJO, 1984) and similar rate distributions in these waters (OLsoN, 1981a) and Washington coastal waters also show surface minima consistent with light inhibition. Substrate limitation may contribute to low rates; however, correlation analysis on data from these waters (WARD, 1985) indicated a strong negative correlation with light (in the photic zone) but no significant correlation with

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798 B.B. WARD

ammonium concentration. In addition, the maximum in ammonium oxidation at the bottom of the photic zone is not consistently associated with a maximum m ammonmm concentration and no increase in ammonium concentration with depth parallels the increase in rate through the photic zone, ammonium being generally very low throughoui the water column.

Rather than locally higher ammonium concentration being responsible for the subsur- face maximum, the maximum can be interpreted as occurring at a depth where ligh| inhibition is no longer significant and ammonium supply rate is enhanced. At this level u switch from net nitrogen assimilation to net nitrogen dissimilation must occur, and tile rate of organic matter remineralization is greatest. An exponential decay in the supply of organic matter (WYRXKI, 1962) and therefore in the ammonium oxidation rate (below thc maximum) might be expected with increasing depth (distance from the supply term in the photic zone). The rate distribution at Sta. 205 did not fit any analytical curve well. A1 Stas 206 and TRP3, the subphotic rates fit a power distribution better than they fit an exponential curve: Station 206: (n = 5) exponential; r 2 = 0.63: power: r= = ~).88: Sta. TRP3: (n = 6) exponential: r 2 = 0.39; power: r 2 = 0.68. The power curve implies a decrease in rate with depth that is much faster than an exponential decrease.

OLSON'S (1981a) ammonium oxidation data from the Southern California Bight shiny similar patterns in photic zone samples, and there is evidence at some stations of u subsurface maximum although a general increase with depth was more often reported. These data contain very few measurements deeper than 100 m and thus cannot bc compared with the shape of the distribution in deep water reported here.

The existence of a narrow subsurface maximum in ammonium oxidation rate in the present data implies that most ammonium oxidation, and perhaps most organic matter decomposition/nutrient regeneration occurred in this relatively small depth interval close to the photic zone. The maximum occurred in only one or two of the profile samplcs~ implying that (1) it may be an easily missed feature, and (2) the true shape and actual magnitude of the maximum may not be accurately represented in widely spaced vertical profile samples. Nevertheless, an indication of the importance of this feature relative t~ the entire water column is that all three stations, the integrated ammonium oxidation rate in the 200 m interval around the maximum included 50% or more of the ammonium oxidation in the entire 800-1000 m water column. If this subsurface maximum feature i-~ really a few to 100 m thick, the estimate of its relative contribution might be revised significantly upward by slightly different sample spacing. There is no evidence in these profiles for the existence of another sharp maximum elsewhere in the water column (although I did not sample within the benthic boundary layer).

Both ammonium and nitrite oxidation rates are expected to be influenced by oxygen concentration, since both are obligately aerobic processes favored at low oxygen concentration. The partial depletion of oxygen in the deep basins studied here mighl influence & situ nitrification rates; however, no attempt was made to control oxygen concentration in the incubation bottles, and no independent correlation between measured rates and ambient oxygen concentration was detected in these data.

The magnitude of ammonium oxidation rates reported here is similar to those reported by OLSON (1981a) for the same region and the range described here is encompassed by the results of WAm~ et al. (1984) for the Washington coast.

Nitrite oxidation rates reported here are less reproducible, less consistent and less easily interpreted than the ammonium oxidation rate results. Although nitrite oxidizing

Page 15: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 799

bacteria are also inhibited by light, perhaps more strongly than ammonium oxidizers (OLSON, 1981b; HORRIGAN et al . , 1981), substantial nitrite oxidation was detected in surface samples from some stations. OesoN (1981a) attributed the high surface nitrite oxidation rates in his data to photo-oxidation. Abiological oxidation of nitrite and ammonium does not occur under natural seawater conditions, with the only known exception being photo-oxidation of nitrite in surface waters (ZAvmIOV et al . , 1980). The methods used here cannot distinguish between biological and chemical oxidation and the latter is assumed to be negligible. However, photochemical oxidation of nitrite in surface waters is consistent with the distribution pattern of nitrite oxidation observed here. A minimum rate, where neither photochemical nor biological nitrite oxidation was occur- ring, was found just below the surface minimum. Biological oxidation begins only at very low light intensities, separated by the depth of the photic zone from the region of photochemical oxidation.

While highest ammonium oxidation rates were found near the photic zone, nitrite oxidation rates were maximal much deeper in the water column. Nitrite and ammonium oxidation are conventionally assumed to function as coupled processes, accurately represented by the net reaction, oxidation of ammonium to nitrate. The data reported here indicate that the two steps of nitrification were not tightly coupled in these experiments, and imply that the two processes may be partially controlled by different forces. The lack of a subsurface peak in nitrite oxidation corresponding to the ammonium oxidation maximum may imply the existence of another sink for nitrite in this layer. However, the nitrite oxidation rate in the depth interval of the ammonium oxidation rate maximum usually equalled or exceeded the integrated ammonium oxidation rate. The nitrite oxidation rate greatly exceeded the ammonium oxidation rate when both were integrated over the water column (Table 1). At Stas 205 and TRP3, integrated nitrite oxidation exceeded integrated oxidation rates by about 4-fold. However, at Sta. 206, the difference was 19-fold, further evidence that the ammonium oxidation rates measured at Sta. 206 were anomalously low. From mass balance considerations, this apparent uncoupling cannot persist. Another source of nitrite, e.g. from partial denitrification, is not likely in these waters. Temporal and spatial variations in substrate supply, as well as methodological uncertainty in the nitrite oxidation rates (see below) can account for these observations.

The discussion of nitrite oxidation rates thus far was based on values computed using the equation of DUGDALE and GOERING (1967). If the exponential decrease in isotope ratio of the substrate pool is considered (GLmER~ ~ et al. , 1982a) even higher values are obtained. Given that either method yields rates in excess of a.mmonium oxidation rates and of new primary production, possible errors in the measurement of nitrite oxidation rates must be considered. Nitrite oxidation measurements are subject to the same methodological constraints of containment, substrate enhancement and subsequent depletion, etc., as ammonium oxidation. Less is known, however, about the nitrite oxidizing bacteria and how they respond to such factors. Nitrite oxidizing bacteria are apparently more substrate dependent, although this relationship was not observed in the present data set. Nitrite oxidation in sgmples from the Southern California Bight (OLsoN, 1981a) and off Baja California (B. B. WARD, unpublished data) showed marked substrate dependence at nitrite concentrations <1 ~tM, unlike ammonium oxidation, which was unaffected up to 2 ~tM. Addition of tracer would therefore enhance measured rates out of proportion to the ammonium oxidation rates. This substrate effect means

Page 16: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

800 B. B. WARD

.Table 1. Comparison of measured and calculated production and nitrification rute_~

Total primary production Ncw production

Method a Method b

Station (gCm-+d I) ( g C m Z y l ) , ( m m o l N m e d ~) (%) (mmolNm+'d ~)(mmolNm ~d +?

21-205 11.253 92 2.92 23 0,67 10S 21-TRP 0.419 i 53 4.51 38 t. 72 I (+7 22-206 22-TRP3 0.651 238 5.87 59 3.49 2.17

Regenerated production Nitrilication (retool N m e d t) below 80 m

Total/New (mmol N m 2 d i) Intcgratcd

NH~ + N O , a b N t t j ~ , N ( ) , N O , ~. NO~ [N()~+-, NO~ i

Station Assimilation [Ntt~ -, NOj

21-2115 3.75 2.25 1.84 t0+79 52.5b 4.87 21-TRP 4. t5 2.79 2.84 25.90 22-206 3.85 tl.38 7.4tl 1')+47 22-TRP3 2.69 2.38 3.711 2.46 8.85 3. (~{ I

[Integrated nitrilication ratc]

Station

[New production (mcthod a)]

Nt-t~ + NO, NO,--* NO~,

21-205 16.01 77.97 2 I-TRP 15.02 22-2116 22-TRP3 tl. 71 2.54

*New production: a = new production calculated according to EPPLEY and PETkRSON 119791, (new productioil/total production) = 0.11025 xtotat production; b = new production calculated as 37% of total production (= average percent for the Southern California Bight; EPPLt:Y and PH'ERSON, 1979). Regencrated production: NH4 ~ + NO~ assimilation = sum of ammonium and nitrite assimilation integrated over the photic zone; (Total/New) = regenerated production calculated as (total production new production): nc~ production calculated in two ways, a and b, as above.

that the a m m o n i u m oxida t ion rates repor ted here are more likely to represent in sire

rates than are the nitr i te oxidat ion rates. The potent ia l for differential impac! ot

e n v i r o n m e n t a l factors such as incuba t ion t empe r a t u r e and oxygen pe r tu rba t ion cannot bc assessed in these exper iments .

The use of ~SN tracers to measure nitr i te oxidat ion is made difficult in deep waters by the fact that a very small en r i chmen t in a very large pool must be measu red to de te rmine the rate. A slight e r ror in e n r i c h m e n t mult ipl ies up to a large error in rate. This is a greater source of variabil i ty in the ni t r i te oxidat ion data than for a m m o n i u m oxidat ion. However , high rates were found in and above the ni t racl ine where this source of error would be minimized ,

The depth var ia t ion in measu red nitr if ication rates and in the corre la t ions with e n v i r o n m e n t a l factors p resen ted here and elsewhere (WARD, 1985) suggest that ins tanta- neous rates are highly responsive to e n v i r o n m e n t a l factors. The overall growth rate and a b u n d a n c e s of the ni tr i fying bacterial popu la t ion is, however , less directly influenced. For example , the m a x i m u m in a m m o n i u m oxidat ion rates is more likely a result of a

Page 17: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 801

short-term response of the cells to a dynamic balance between substrate availability and light intensity than to a long-term strategy of nitrifying bacteria concentrating in a certain depth or density interval. It is also evident from these data that autotrophic activity as measured by autoradiography and nitrogen oxidation as measured by 15N tracers follow the same general pattern in the water column, but are not necessarily closely coupled over the scales of experimental incubations. Laboratory studies (BELsER, 1984; GLOVER, 1985) indicate that the ratio of carbon fixed to nitrogen oxidized varies somewhat as a function of growth rate, substrate concentration or pH. The possible influence of oxygen concentration was not quantified in these studies. The oxygen conditions of these samples prior to collection and incubation varied from saturated to about 0.25 ml 1 r over the water column. However, due to sample manipulation prior to incubation, oxygen concentrations during incubation were near saturation, so oxygen could not have directly limited the measured rates.

Laboratory studies on the growth and physiology of nitrifying bacteria indicate that they are capable of sustained inactivity over long periods of substrate depletion (BooK and HEINR1CH, 1971). Long generation times and long lag times preceding growth in enrichment cultures are not unusual (CAaLUCCl and STRICKLAND, 1968; WATSON, 1965), and environmental stress can result in cessation of activity independent of cell death (YostnOKA and SMJo, 1984). The field observations reported here in combination with findings from previous culture studies yield the not unexpected conclusion that bacterial numbers are not necessarily good indicators of in situ activity. This may be particularly true of marine nitrifying bacteria. Their numbers vary much less with depth and environmental conditions than does the total bacterial population. The low abundances of nitrifiers, <1% of the tothl bacterial population in the Southern California Bight (WARD and CARLUCCI, 1985) makes it difficult to detect significant differences in abundances in oligotrophic waters. In contrast, significant population variations were found in the much more productive upwelling regime off Peru (B. B, WARD, unpub- lished data).

Assimilation of ammonium by natural populations has been widely studied (MACISAAC and DUGDALE, 1969; EPPLEY et al., 1979; WHEELER et al., 1982; GLIBERT et al., 1982b). The assimilation data reported here are consistent with those reported by EPPLE¥ et al. (1979) and OLSON (1981a) for the same geographic area, and are discussed here only in comparison to the distribution of oxidation rates. Nitrite is not usually considered an important nitrogen source for phytoplankton compared to ammonium and nitrate, and its assimilation is less well known (McCARTHY et al., 1984). In this study, significant nitrite assimilation rates were much lower than ammonium assimilation rates in parallel incubations and were restricted to shallower depths.

New product ion considerations

In oligotrophic waters, it is useful to consider the mixed layer and the underlying deep ocean as separate but linked nitrogen cycling systems. While the net flux of nitrogen in the mixed layer is from the dissolved pool into the particulate pool, the net flux in deep water is in the other direction. The two reservoirs are linked by the sinking of particulate nitrogen from the mixed layer and mixing and upwelling of the dissolved nitrogen resulting from decomposition of particulate nitrogen in the deep layer. Over the time scale of years, the two major fluxes represented by new production (equivalent to the sinking flux of particulate nitrogen out of the mixed layer; EPPLEY et al., 1983) and

Page 18: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

802 B.B. WArD

nitrification must roughly balance each other. For typical marine systems, it is generally assumed that new production is supported by nitrate (DUGDALE and Gor~rlN(;, 1967). l'he data presented above will be compared with estimates of new production to assess thi~ relationship.

Total primary production (E. H. RENGER and R. W. EPI, I..EY, unpublished data) was measured using 24 h incubations with NaHHCO3 (E~,pt,t.:Y et at . , 1979) t~t 3 of the 4 stations for which nitrification and assimilation rate data are presented. Integrated primary production (computed by the polygon method) in the upper 51r-60 m of the water column (down to the 1% surface light level) is given in Table 1. Total carbon production was converted to nitrogen production by multiplying by the N:C ratio of the particulate matter at each depth (EPPH:'~ et a l . , 1983). Since nitrate assimilation was not measured directly, we estimated new production as a fraction of the total. One estimate was obtained using the algorithm of EPPLEY and PE'IERSON (1979) for regions with total production <200 g C m 2 y-r: new/total (in percent) = 0.0025 total. Using an average fraction of 37% for Southern California Bight stations, (EPPkeV and PETErSON, 1979) yielded a second estimate.

Assimilation of ammonium and nitrite, urea and organic nitrogen (to a much smaller degree) presumably accounts for "regenerated production" (Du(;DAL~ and G(~ErI~;. 1967). Measured rates of ammonium and nitrite assimilation integrated over the uppel 80 m (down to the 0.1% light depth) are presented in Table 1. Nitrite assimilation is a minor process: in these data it comprises 1.1-13.8% of the total assimilation ~)i ammonium plus nitrite. Ammonium and nitrite assimilation together represent from 4(~ to 129% (average = 89%) of the total nitrogen production estimated from the ~4C data. The combined assimilation of ammonium and nitrite averaged 143% of the regenerated production calculated from the new production algorithm of EPPLEY and PFl~so:', (1979). If the measured assimilation rates are 2-fold underestimates, based on methodo- logical considerations (see above), then true assimilation rates might exceed the regener- ated production estimate by 2.25-3.34 times, It is interesting to note that sediment trap experiments on the same cruise (NEt,SON et al . , 1987) found that only 5% of primary production (about 10% of calculated new production) reached 100 m. Both the mea- sured assimilation rates and measured particulate fluxes imply that regenerated produc-- tion was a large fraction of the total at the time these data were collected.

Measured nitrification rates, integrated between 80 m and the deepest depth sampled. are also presented in Table 1. Nitrification shallower than 80 m was ommitted from the calculation because, strictly speaking, it occurs within the mixed layer and could bc considered to support in s i tu regenerated production. Nitrification above 80 m contri- buted an average of 18.3% of total water column rates for ammonium oxidation and an average of 13.5% for nitrite oxidation. Integrated nitrification rates, both ammonium and nitrite oxidation, exceeded new production in the overlying photic zone at most stations, sometimes by a very large amount. Since measured nitrite oxidation always exceeded measured ammonium oxidation, integrated nitrite oxidation overestimates new production more extremely than does ammonium oxidation.

There are several possible explanations for the lack of agreement between nitrification and new production estimates. (1) Measured nitrification rates seriously overestimate in si tu rates. Three lines of reasoning do not support this possibility, at least in the case oi ammonium oxidation. The rates reported here are very similar in magnitude and distribution to those reported by OLSON (1981a) and WArD et al. (1982) for the same

Page 19: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

Nitrogen transformations in the Southern California Bight 803

region. Although the nitrifying bacterial abundances reported here exceed earlier estimates (WARD, 1982), the computed per cell oxidiation rates presented here are well within the range reported for cultures at low substrate levels or extrapolated to environmental conditions from culture work (WATSON, 1965; CARLUCCl and STRICKLAND, 1968; GLOVER, 1985; WARD, unpublished data). An overwhelming systematic error derived from the incubation and 15N-tracer procedure cannot be ruled out. However, enhancement of in situ rates due to added tracer substrate is not supported by the lack of substrate concentration response in the measured rates. Lastly, the relationship between oxidation and assimilation of ammonium and nitrite observed here is similar to that found in this region previously (OLSON, 1981a) and off the coast of Washington (WARD et al., 1984). Although this relationship principally addresses nitrification above the 80 m depth used as the upper limit for integration in Table 1, this consistent relationship argues against a systematic order of magnitude error in the nitrification measurements.

(2) New primary production estimates are low. Again, the total and new primary production rates used in these comparisons are lower than the average reported by EPPLEY and PETERSON (1979) but are nevertheless consistent with previously reported data for this area (EPPLEY and PETERSON, 1979: EPPLEY et al., 1979). The fractional contribution of ammonium and nitrite assimilation to total production usually decreases as the total amount of primary production increases (Table 1), and this trend is consistent with the trend in percent new production calculated using the algorithm of EPPLE~ and PETERSON (1979).

(3) Sample spacing was inadequate to accurately represent the distribution of the rate processes. Wide sample spacing could result in underestimates of integrated rates by missing narrow features. Overestimates could be obtained by integrating the effect of narrow features over the distance between samples. The latter error is a strong possibility for both the ammonium and nitrite oxidation distributions reported here. Since narrow maxima were observed in the ammonium oxidation rate profiles, and high variability in the nitrite oxidation profiles, much closer sample spacing is necessary to realistically describe the distribution of these processes, and to accurately estimate their integrated values.

(4) Steady-state assumptions do not apply over the time scale of these measurements. The data presented here were collected over a few days and significant differences in the magnitude of rate processes were noted among stations (e.g. ammonium oxidation at Stas TRP3 and 206, both in May), while the nitrogen balance we seek is necessarily a long- term phenomenon. While each of the data sets presented here (primary production, nitrogen assimilation and nitrogen oxidation) is internally consistent, and is consistent with previously reported data, normal seasonal and annual variations in each may minimize the differences we see here. The temporal relationship between primary production, sinking particulate flux and regeneration of soluble nitrogen is quite variable (EPPLEY et al., 1983) and we do not know the magnitude of the temporal or spatial uncouplings that may be expected between sinking flux and in situ nitrification rates.

The assimilatory and oxidation processes are both evidently influenced by light, in opposite ways. The ultimate light dependence of phytoplankton and light inhibition of nitrifying bacteria produce rate distributions that cross near the base of the photic zone. In this depth interval, the interactions of micro-organisms in the nitrogen cycle become quite complex. Nitrification consumes ammonium and produces nitrate, and nitrite often functions as a short half-life intermediate which can accumulate when the two steps of

Page 20: Nitrogen transformations in the Southern California Bight · AMMONIUM and nitrite both occm: as intermediates in the nitrogen cycle in seawater. These compounds are important as the

804 B .B . WARD

n i t r i f i c a t i o n a r e u n c o u p l e d [e .g . d u e to d i f f e r e n t i a l l i gh t i n h i b i t i o n in f o r m i n g t h e p r i m a r y

n i t r i t e m a x i m u m (OLSON, 1981b) ] . W h i l e al l o f t h e i n o r g a n i c n i t r o g e n f o r m s a r c u t i l i z a b l e

b y p h y t o p l a n k t o n , t h e r e l a t i v e c o n c e n t r a t i o n s o f e a c h m a y i n f l u e n c e t h e i r u p t a k e r a t e s

a n d t h e g r o w t h e f f i c i e n c y o f p h y t o p l a n k t o n . T h e r a t e d a t a p r e s e n t e d h e r e i m p l y t h a t t h e

b o t t o m o f t h e p h o t i c z o n e / n i t r a c l i n e r e g i o n is a n i m p o r t a n t a r e a fo r f u t u r e i n v e s t i g a t i o n s

o f m i c r o b i a l n i t r o g e n cyc l ing .

R E F E R E N C E S

BARSDATE R. J. and R. C. DtXn)AtJ,: (1965) Rapid conversion of organic nitrogen to N~ for mass spcc t romet~ an automated Dumas prodecurc. Analytical Biochemisto,, 13. 1-5.

BELSt¢R L. W. (1984) Bicarbonate uptake by nitrifiers: Effects of growth rate, pH, substrate c~mccntration, an~ metabolic inhibitors. Applied and Environmental Microbiologw 48, 1100-1104.

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