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Ran ZHANG Supervisor: Prof. Nian LIN Investigation of Low-Dimensional Conjugated Nanostructures on Metal Substrates Using Scanning Tunneling Microscopy

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Page 1: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Ran ZHANG

Supervisor: Prof. Nian LIN

Investigation of Low-Dimensional Conjugated Nanostructures on Metal Substrates Using

Scanning Tunneling Microscopy

Page 2: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Outline

Introduction

• Low-dimensional conjugated nanostructures

• Fabrication of low-dimensional conjugated nanostructures

Supramolecular templates:

• Metal quantum dots: -Growth of Bi nanocluster arrays directed by supramolecular templates

• Chemical reactions: -Sonogashira coupling directed by supramolecular templates

On-surface synthesis:

• 2D conjugated MOF: -Cu3(C6O6) Metal-Organic Monolayer

• 2D conjugated COF: -Chemical reactions of aryl-dibromo molecules on metal surfaces

Summary

Page 3: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Introduction: Low-dimensional conjugated nanostructures

Staggered COF/π-d conjugated MOF Single-walled CNTs Quantum dots

0D 1D 2D

Atomic precision

Nanomaterials: sizing from 0.1 to 100 nm

Molecular Precursors 2D COF

Au(111)

Annealing

On-surface synthesis

Direct on-surface synthesis

Nat.Nanotechn. 2, 687–691 (2007). Small 15, 1803169(2019).

J. Am. Chem. Soc.135, 3576-3582(2013).

QD: https://en.wikipedia.org/wiki/Quantum_dot

CNTs:

http://large.stanford.edu/courses/2015/ph240/kumar1/

Science 310, 1166-1170(2005).

Angew. Chem. Int. Ed. 55, 3566 – 3579(2016).

Supramolecular templates

Cage metal clusters

C N

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Introduction: Fabrication of Low-dimensional nanostructures

Top down

Bottom up Covalent/non-covalent interaction

Atomic precision: 0.1nm

photolithography etching, electron-beam writing, stamping…

Nature 2005, 437, 671–679.

Page 5: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Introduction: Experimental Setup

J. Am. Chem. Soc. 2013, 135, 3576-3582.

Scanning

Metal source Molecule source

Ultra-high Vacuum Chamber

STM

UHV chamber Metal substrates

Characterization: STM: structural configuration STS: LT measurement for electronic structure

Page 6: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Outline

Introduction

• Low-dimensional conjugated nanostructures

• Fabrication of low-dimensional conjugated nanostructures

Supramolecular templates:

• Metal quantum dots: -Growth of Bi nanocluster arrays directed by supramolecular templates

• Chemical reactions: -Sonogashira coupling directed by supramolecular templates

On-surface synthesis:

• 2D conjugated MOF: -Cu3(C6O6) Metal-Organic Monolayer

• 2D conjugated COF: -Chemical reactions of aryl-dibromo molecules on metal surfaces

Summary

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Introduction 2D superlattices of metal quantum dots

Optical and electronic

properties:

Structure

Periodicity

Intercluster spacing

Metal clusters grown on substrates

N’Diaye. et. al., New J Phys. 11, 1 –19(2009)

Ultramicroscopy 42-44, 556 (1992) Phys.Rev.Lett. 110, 086102(2013)

Bismuth:

High carrier mobility

Strong SOC

Dw of Bi: Semimetal

–>semiconductor

Materials Science and Engineering C 23, 129–140(2003)

Ir /Graphene Moire/Ir(111)

Ir /h-BN/Ir(111)

Intercluster spacing cannot be tuned.

Size is not mono-dispersed.

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J.Phys.Chem.C. 111, 10138-10141(2007); J. Am. Chem. Soc., 133, 6150-6153(2011).

Results and Discussion Bi cluster superlattices on templates

50 nm×50nm Template-TMA-1

90 nm×90nm Template-3

90 nm×90nm Template-2

Trimesic Acid (TMA) Hydrogen bond

1,3,5-tris (pyridyl) benzene(TPyB) Pyridyl-Cu coordination bond

1,3,5- tris [4-(pyridin-4-yl) phenyl] benzene(L-TPyB) Pyridyl-Cu coordination bond

Cu Cu

1.65nm 2.60nm 4.00nm

Au(111)

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90 nm×90nm 97%

90 nm×90nm 55%

90 nm×90nm 45%

Results and Discussion Bi cluster superlattices on templates

Au(111)

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Abundance: 87%; Area:1.3 ± 0.2 nm2

Abundance: 30%; Area: 3.0 ± 0.2nm2

Abundance: 10%; Area: 9.0 ± 0.2nm2

1.1 nm2 2.8 nm2 9.0 nm2

Results and Discussion Size distribution of Bi clusters

Bi-Bi: 0.33nm

Van de Waals pore size

7 Bi 19 Bi 61 Bi

Page 11: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

0.6ML molecules; TMA-n templates (20 nm×20 nm)

TMA-2 TMA-3 TMA-4 TMA-5

2.55nm 3.55nm 4.38nm 5.30nm

Results and Discussion Bi cluster superlattices on TMA templates

Page 12: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Bi quantum dot superlattices.

Atomic precision by supramolecular templates

Tuning nanocluster size and superlattice periodicity

Conclusion

TMA +Bi

Page 13: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Outline

Introduction

• Low-dimensional conjugated nanostructures

• Fabrication of low-dimensional conjugated nanostructures

Supramolecular templates:

• Metal quantum dots: -Growth of Bi nanocluster arrays directed by supramolecular templates

• Chemical reactions: -Sonogashira coupling directed by supramolecular templates

On-surface synthesis:

• 2D conjugated MOF: -Cu3(C6O6) Metal-Organic Monolayer

• 2D conjugated COF: -Chemical reactions of aryl-dibromo molecules on metal surfaces

Summary

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Introduction Sonogashira cross-coupling

Au(100)

On-surface SCC coupling only took place at island boundaries.

Aryl-ethynyl compounds

J. PHYS. CHEM. C. 2014, 118, 11677–11684 Org. Lett., Vol. 5, No. 11, 2003

Sonogashira cross-coupling(SCC)

R: Aryl

R’: Aryl or Vinyl

X:I,Br, Cl or OTf

R R

Glaser coupling

R’-R’

Ullmann coupling

Homo coupling

Page 15: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Introduction Chemical templates

Template: Reactant + metal –> coordination

doi.org/10.1038/s41467-018-07933-0

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5,15-di-(4-pyridyl)-10, and 20-

bromophenyl porphyrin

B1:

1. B1 form 2D islands; A occupy the surface as 2D gas phase at room temperature. 2. Annealing promotes homo-coupling. 3. SCC<3.4%.

Results and Discussion Reaction without templates on Au(111)

B1

Pd

HP1

HP2

SCC<3.4%

A

A:

4-ethynylbiphenyl

Reactant 1: Reactant 2:

Page 17: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion SCC in template 1 on Au(111)

35nm×55nm

Dosing A

35nm × 55nm

T1: template 2

Phase separation of T1 and A greatly

decreases reaction sites.

Y shape features are binding to B1.

T1 is unstable even at RT, which cannot

inhibit homo-coupling.

T1

Au(111)

1nm

5nm

Dosing Pd

Page 18: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion SCC in template 2 on Au(111)

Yield at RT ~10%

Yield at 170°C annealing ~67%

T2 is an effective template for

on-surface SCC.

Reactant 1:

5,10,15-tri-(4-pyridyl)-20-

bromophenyl porphyrin

B2:

Molecular

model of CP2

Molecular

model of SCC

46nm × 46nm

Annealing to 170°C

T2

Au(111)

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Conclusion

T1 is not rigid enough. (Structural rigidity)

T1 is not robust enough. (Thermal stability)

T2 is rigid enough and robust enough.

T2 has accessible reaction sites for A.

Page 20: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Outline

Introduction

• Low-dimensional conjugated nanostructures

• Fabrication of low-dimensional conjugated nanostructures

Supramolecular templates:

• Metal quantum dots: -Growth of Bi nanocluster arrays directed by supramolecular templates

• Chemical reactions: -Sonogashira coupling directed by supramolecular templates

On-surface synthesis:

• 2D conjugated MOF: -Cu3(C6O6) Metal-Organic Monolayer

• 2D conjugated COF: -Chemical reactions of aryl-dibromo molecules on metal surfaces

Summary

Page 21: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Introduction Conductive 2D metal-organic networks

Nat. Commun. 2015, 6, 1 – 8. Nano Lett. 2017, 17, 6166−6170.

Angew. Chem. 2018, 130, 152 –156.

[Cu3(C6S6)]n formed from liquid-liquid interface reaction RT conductivity: 1,580 S cm-1

The highest value of coordination polymers

Cu-BHT film

Thickness: 15-500nm

Multilayers

Tc of monolayer Cu-BHT: 4.43 K

Tc of bulk Cu-BHT :1.58 K

A Bardeen−Cooper−Schrieffer Superconductivity

Bulk SC : Tc = 0.25 K

Thickness: 800nm

Cu-BHT film

Page 22: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

J. Chem. Phys. 2017, 147, 214706 PHYSICAL REVIEW B 2008, 77, 085410

Benzenehexol

HB phase

Cu(111)

RT

Partially deprotonated

tetrahydroxyquinone (THQ)

O—H:0.18nm

Results and Discussion BHO/Cu(111) at RT

2nm

0.73nm

1.97nm

Page 23: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Benzenehexol

Cu(111)

523k

fully deprotonated

Cu-BHO network

Results and Discussion BHO/Cu(111) at 523K

-OH

-O-Cu O 1s

Lattice :0.823 nm O-Cu: 0.18nm

Page 24: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion STS, PDOS and STS mapping of Cu3(C6O6) network

molecular center

Cu adatom

PDOS, simulated mapping of a free-standing Cu3(C6O6) network

STS, STS mapping of a Cu3(C6O6) network on Cu(111)

Page 25: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

MOF adsorbed on Cu(111): band gap: 1.5 V Highly dispersive bands:

1. -0.5 V to -1.5 V 2. 0.8 V to 2 V

Results and Discussion FT-STS of a Cu3(C6O6) network on Cu(111)

Free standing MOF: Two bands crossing Fermi level Highly dispersive bands around gap

Single layered Cu3(C6O6) framework (metallic)

A monolayer on Cu(111) (semiconductive)

O-Cu-O bonding motif offers efficient charge delocalization

Page 26: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Outline

Introduction

• Low-dimensional conjugated nanostructures

• Fabrication of low-dimensional conjugated nanostructures

Supramolecular templates:

• Metal quantum dots: -Growth of Bi nanocluster arrays directed by supramolecular templates

• Chemical reactions: -Sonogashira coupling directed by supramolecular templates

On-surface synthesis:

• 2D conjugated MOF: -Cu3(C6O6) Metal-Organic Monolayer

• 2D conjugated COF: -Chemical reactions of aryl-dibromo molecules on metal surfaces

Summary

Page 27: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Introduction On-surface synthesis of dibromo aryls

[2+2] cycloaddition/Ag(111)

Ullmann reaction/Au(111) Au(111) Au(100)

Organometallic structure/Cu(111)

J. Am. Chem. Soc. 2017, 139, 17617−17623

Chem. Commun., 2018, 54, 7948--7951

M. Koch, et al. in From Polyphenylenes to Nanographenes and Graphene Nanoribbons, Springer International

Publishing, Cham, 2017, pp. 99-125.

No intermediate states

No extended covalent networks

Page 28: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion HBTP on Au(111)

Intermolecular bonding: Halogen bond

Angew. Chem. Int. Ed. 2009, 48, 3838.

100C annealing; 12 hours

3nm 110C annealing; 22 hours

1nm C3: forming a 6-member ring C1: forming a Au-organo hybrid

370C annealing; 15minutes

C3

C1

C2: forming a 4-member ring C2

Intermediate state

IS IntS

FS

Au(111)

Page 29: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion HBTP on Cu-dosed Au(111)

Cu

HBTP; Cu; 100°C annealing

Au(111)

Page 30: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

1nm

Results and Discussion HBTP on Cu-dosed Au(111)

140°C annealing

C2: forming a 4-member ring

Intermediate state IS IntS FS

Au(111)

Cu

Page 31: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion HBTP on Cu(111)

220°C hot surface deposition

Cu-organometallic network

Deposition molecules onto surface kept at higher

temperature doesn’t lead to covalent network!

IS

FS

Cu(111)

Page 32: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion HBTP on Ag(111)

RT

Debrominated HBTP

Intact HBTP

170°C Annealing 220°C Annealing

Ag-cluster-organometallic structure

290°C Annealing

C2 oligomers

Intermediate state

IS IntS

FS

Ag(111)

Page 33: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Results and Discussion HBTP on Ag(111)

290°C Hot surface deposition

C2 network

Ag(111)

Pentagonal oligomers

Hexagonal oligomers

Inreversibility of covalent bonds

Page 34: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Conclusion

Au

Br Br Br Br

Br

Br

Br

Br

Br Br

Stepwise aryl-aryl coupling

Br Br

Br Br

Br Br

Br Br

M

M

Aryne

Page 35: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Summary

Atomic precision

2D Bi nanocluster superlattices

Au(111)

Templated Sonogashira cross-coupling

Au(111)

Cu3(C6O6) metal-organic monolayer [2+2] cycloaddition of aryl-dibromide

Ag(111)

Next step: Enhance the conjugation along the chains

Eg: π-d conjugation

Pyridyl –> -OH –> -O-Cu-O-

Next step: Transport measurement

1. Desorption at 650K annealing

2. Different orientations

Nanoscale, 2017, 9, 2785–2792

Next step:

Kinetic control (Coverage, annealing

temperature, duration…)

Extrinsic catalysts (Cu, Pd, Ni...)

Artificial Graphene: Decoration of 2DEG of metal surfaces Strong SOC effect in Bi Artificial 2D quantum spin-hall insulator

Nature, 483, 306-310.(2010) Phys. Rev. B 86, 201406(2012)

Next step:

Page 36: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Publication

[10] [2+2] cycloaddition reactions on metal surfaces, R. Zhang, B. Xia, Z. Gao, H. Xu, N. Lin, Manuscript. [9] Kinetically-controlled synthesis of four-member and six-member cyclic products via sequential aryl-aryl coupling on a Au(111) surface, R. Zhang, B. Xia, H. Xu, N. Lin, ChemPhysChem, Accepted. [8] Cu3(C6O6) metal-organic monolayer exhibiting highly dispersive electronic band, R. Zhang, J. Liu, Y. Gao, M. Hua, B. Xia, P. Knecht, A. C. Papageorgiou, J. Reichert, J. V. Barth, L. Huang, H. Xu, N. Lin, Submitted. [7] Template-controlled Sonogashira cross-coupling reactions on Au(111) surface, R. Zhang, G. Lyu, D. Y. Li, P. N. Liu, N. Lin, Chem. Commun. 53, 1731(2017). [6] Two-Dimensional Superlattices of Bi Nanoclusters formed on a Au(111) Surface using Porous Supramolecular Templates, R. Zhang, G. Lyu, C. Chen, T. Lin, P. N. Liu, N. Lin, ACS Nano, 9, 8547- 8553 (2015). [5]On-surface coupling reactions with extrinsic catalysts, W. Zhao, L. Dong, R. Zhang and N. Lin, Book Chapter, On-surface synthesis II. [4] Selective on-surface covalent coupling based on metal-organic coordination template, S. Xing, Z. Zhang, X. Fei, W. Zhao, R. Zhang, T. Lin, D. Zhao, H. Ju, J. Fan, J. Zhu, Y.-Q. Ma, Z. Shi, Nat. Commun. 1, 10(2019). [3]Synthesis and characterization of a single-layer conjugated metal-organic structure featuring a non-trivial topological gap, Z. Gao, C.-H. Hsu, J. Liu, F.-C. Chuang, R. Zhang, B. Xia, H. Xu, L. Huang, Q. Jin, P. N. Liu, N. Lin, Nanoscale, 11, 878 (2019). [2] Quasicrystallinity expressed in two-dimensional coordination networks, J. Urgel, D. Ecija, G. Lyu, R. Zhang, C. A. Palma, W. Auwärter, N. Lin, J. V. Barth, Johannes, Nature Chemistry, 8, 657 (2016). [1] On-surface assembly of low-dimensional Pb-coordinated metal-organic structures, G. Lyu, R. Zhang, X. Zhang, P. N. Liu, N. Lin, J. Mater. Chem. C. 3, 3252 (2015).

Page 37: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries

Acknowledgement

– Supervisor:

Prof. Nian Lin

– Examination committee members:

Prof. Yilong Han

Prof. Weijia Wen

Prof. Haibin Su

Prof. Dingyong Zhong(SYSU)

Prof. Jianan Qu

– Collaborator:

Prof. Pei Nian Liu (ECUST)

Prof. Hu Xu(SUSTC)

Prof. Li Huang(SUSTC)

Dr. Anthoula Papageorgiou(TUM)

Prof. Johannes V. Barth(TUM)

Prof. Ziliang Shi(Soochow Univerisity)

– Colleagues:

Former Members:

Dr. Guoqing Lyu

Dr. Tao Lin

Dr. Guowen Kuang

Dr. Lei Dong

Dr. Linghao Yan

Mr. Qiushi Zhang

Dr. Jing Liu

Current Members:

Mr. Zi’ang Gao

Mr. Bowen Xia

Mr. Yifan Gao

Mr. Muqing Hua

Mr. Xiaobo Wang

Dr. En Li

Page 38: Investigation of Low-Dimensional Conjugated Nanostructures on … · 2019. 9. 6. · Sonogashira cross-coupling Au(100) On-surface SCC coupling only took place at island boundaries