enzymes biomolecules that catalyze chemical reactions - increase reaction rates - specific...

26
Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer groups such as –CH 3 or -NH 2 Hydrolases – catalyze hydrolysis reactions Lyases – catalyze the removal or addition of double bonds Isomerases – catalyze isomerization reactions Ligases – catalyze the joining of two molecules

Upload: kevin-shepherd

Post on 05-Jan-2016

220 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

EnzymesBiomolecules that catalyze chemical reactions

- Increase reaction rates

- Specific

Oxidoreductases – catalyze redox reactions

Transferases – transfer groups such as –CH3 or -NH2

Hydrolases – catalyze hydrolysis reactions

Lyases – catalyze the removal or addition of double bonds

Isomerases – catalyze isomerization reactions

Ligases – catalyze the joining of two molecules

Page 2: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Terms

Substrate - a compound that binds to the enzyme and is processed

Active Site - region (pocket or cleft) in the enzyme where the substrate binds

Activation - an increase in enzymatic activity (how well an enzyme works)

Enzyme Activity

- a measure of the rate of the reaction catalyzed by the enzyme

Inhibition - a decrease in enzyme activity

Inhibitor - a molecule that binds to the enzyme and inhibits activity

Page 3: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Mechanism of Enzyme ActionLock and Key

Induced Fit - substrate binding induces conformational changes

(structural changes) in the enzyme that promote catalysis

Page 4: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Lock and Key

E + S

Page 5: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Lock and Key

E + S ES

Page 6: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Lock and Key

E + S ES E + P

Page 7: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Induced Fit

E + S

Page 8: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Induced Fit

E + S

Page 9: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Induced Fit

E + S ES

Page 10: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Induced Fit

E + S ES E + P

Page 11: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Example: Hexokinase

Hexokinase specifically binds both glucose and ATPHexokinase speeds up the reaction

Page 12: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Glucose Binding

Page 13: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Glucose Binding

Page 14: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Hexokinase binds Glucose and ATP

Substrate binding is governed by intermolecular forces

Page 15: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Example of Induced Fit

Page 16: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Example of Induced Fit

Citrate Synthase

Page 17: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Krebs Cycle

Page 18: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Citrate Synthase

Page 19: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer
Page 20: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer
Page 21: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer
Page 22: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer
Page 23: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Factors that effect enzyme activity

Enzyme and Substrate Concentration

Temperature

pH

Inhibitors

E + S ES → E + P⇌

Page 24: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Competitive vs Noncompetitive Inhibition

Page 25: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

Some Drugs are Enzyme Inhibitors

• Certain drugs bind to Enzymes and prevent binding of the normal substrates

• The enzyme is thus prevented from catalyzing a physiological reaction

Page 26: Enzymes Biomolecules that catalyze chemical reactions - Increase reaction rates - Specific Oxidoreductases – catalyze redox reactions Transferases – transfer

HIV Drugs

N NH

O

NH

O

O

NH2

NH

O

NH3+

O

NH

O

O