dr. alvin yeh department of biomedical engineering dr. arne lekven department of biology josh...
TRANSCRIPT
ALTERING ANGIOGENESIS
IN VITRO
Dr. Alvin Yeh Department of
Biomedical Engineering
Dr. Arne LekvenDepartment of Biology
Josh Bergerson
Normangee High School
Components of Engineering
BiomedicalGenetic
Optics
Tissue
Mechanics
Computer
Faculty Members
Dr. Alvin Yeh• Ph.D., Chemistry,
University of California, Berkeley, 2000
• B.S.E., Chemical Engineering, University of Michigan, 1993
Dr. Arne Lekven• B.A., 1989, UC San Diego,
Animal Physiology. • Ph.D., 1997, UCLA,
Molecular, Cell and Developmental Biology
Lab Group Members
• M.Sc. University of Edinburgh (2008)
• Gene expression in zebrafish
Holly Gibbs
• M.S. Shanghai Jiao Tong University (2002)
• Engineered tissue scaffold developmentYuqiang
“Bob” Bai
• M.S. University of Colorado, Boulder (2005)
• Angiogenesis modeling and manipulationPo-Feng
Lee
Angiogenesis
New blood vessel (capillary) formation
Important in tissue growth & repair
Excessive cancer
Insufficient stroke
Angiogenic Process
ECs detach from wall
Degrade & penetrate basal lamina
Invade surrounding ECM
Extracellular Matrix
Scaffold; structural support
Adhesive contact sites
Mechanical & biochemical signals
Research Question
What effect does changing the collagen fiber stiffness
and thickness have on angiogenic patterns in vitro?
angiogenesis in
diseases
vascularzing
engineered tissue
In Vitro Angiogenesis Model
Endothelial cell
monolayer
Collagen gel preparation
Serum–free medium
Sandwich Modeling
2 possible matrices
Varying fiber stiffness
Observe angiogenic
growth
Fiber Thickness
Polymerizing collagen at varying temperatures
Observe angiogenic patterns in matrix
Data Acquisition
TPF, SHG & Light microscopy
SHG detector
TPF detectorUltrafast laser
Objective
Two-Photon Microscopy Used to create 3D
images from optical sections
Detects sample’s fluorescence (cell/GFP/etc)
Wavelength ~ 405nm
TPF-3D TPF-2D
Second Harmonic Generation (SHG)
Sample mixes 2 photons Detects collagen; crystal,
repeating structure Not measuring
fluorescence Wavelength ~ 480 nm
Second Harmonic Generation (SHG)
E2
E1
hvin
hvin
Virtual States
SHG TPF+SHG
TPF & SHG Imaging depth ~
500um Laser Bandwidth
~ 133nm centered at 800nm
Ability to image living cells
10 femtosecond pulse laser (1x10-
14 s) PMT detectors
Data Analysis
Morphology Cellular Growth
Lumen Development
1 mg/ml 2.5 mg/ml
Brightfield TPF+SHG
Possible Classroom Application
Physics
:
•Optics
•Wave properties
•Mechanics
Chemistry:
•Electromagnetic Spectrum
•Behavior of Electrons
•Biochemistry
Acknowledgements
TAMU E3 RET Program National Science Foundation Nuclear Power Institute Dr. Alvin Yeh Research Group:
Tissue Microscopy Lab Dr. Arne Lekven Lab Group
Conventional Microscopy
Non-laser light source
Snapshot rather than scanning
Imaging depth ~20um
Single Photon Microscopy Imaging depth
~100um Continuous laser
excitation Pinhole allows for
optical sectioning Photobleaching of
fluorescent probes
Tracking Gene Expression Phenotypic expression of brain
development genes is know but specifics are not (wnt1, pax2, fgf8)
Genes can be tracked by tagging with fluorescent proteins
Allows detection of gene being “turned on” during development
Grown on collagen or fibrin scaffold
Engineered Tissue Scaffolds
skin blood vessels
tendon ligament
soft connective
tissue
Spectral Two-Photon Microscopy
16 PMT spectrometer
Computational linear unmixing
Spectral Two-Photon Microscopy To detect gene
expression Simultaneous
detection of multiple fluorescent proteins
Real-time study of live embryonic development
Second Harmonic Generation (SHG)
Detects collagen Requires crystal,
repeating structure Not measuring
fluorescence
Optical Coherence Microscopy (OCM)
Collects light reflected from sample (morphology)
Collects data via spectral detector (significant power loss)
Optical Coherence Microscopy (OCM) Detects fibrin, collagen,
and cell Factor out collagen and
cell through TPF & SHG Observe growth of cell
scaffold under various conditions
Research Goals
Gene Expression
3D data acquisition over time
Visualizing gene
expression
Engineered Tissue
Microscopic; ECM and
cells
Macroscopic;
mechanical properties
Angiogenesis
ECM interaction Environmen
t influences patterns
Wnt1 Gene Expression
Mark Feltner, M.A. Skyline High School Dallas, Texas
Laser’s 2-photon emission, in conjunction with fluorescent proteins, is providing us with more detailed imaging of developing embryos.
Several of the genes discussed are oncogenes – they can, under some circumstances, initiate cancerous growth.
(Q: these include which: wnt 1, wnt 8 (all wnt’s??) spt, pax 2…others?)
Each gene is involved in early brain development. The sp5 gene expression, for instance, is involved in development of the midbrain, hindbrain and spinal cord, but not the forebrain.
(Holly’s schematic here – circular, yellow. NB p 11. Shows mb/hb/sc/fb regions in yolked embryo)
wnt1 pax2a
fgf8
Multiple genes work together in the same place at the same time
In early zebrafish emryos, the mesoderm and endoderm are initially mixed.
They differentiate.
But these are ‘just’ fish, right? How is this relevant to us?
In every vertebrate embryo, there is always a midbrain-hindbrain boundary. This goes for all mammalian species, including us, the mighty Homo sapiens.
In fact, this diagram helps illustrate the commonalities of gene expression that all vertebrate species share.
To recap: Before you can actually see a difference in cell formation, the cells are already expressing the various genes that will cause them to differentiate.
The wnt1 gene appears to be conserved across multiple vertebrate species, including humans.
Thus: understand zerbrafish early brain development, and we can better understand mammalian gene expression of brain development.
This is huge.
Currently, we know what expression of wnt1 gene does, but nobody knows the mechanism of how this gene gets turned on.
This is one question that we hope to answer. Of course, there are many more.