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Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr Elizabeth Pharo CSIRO Australian Animal Health Laboratory (AAHL) CSIRO Health & Biosecurity www.csiro.au

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Page 1: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Developing 3D cell culture systems to combat human pathogens & disease

Probing Biosystems Future Science Platform

Dr Elizabeth Pharo

CSIRO Australian Animal Health Laboratory (AAHL)

CSIRO Health & Biosecurity

www.csiro.au

Page 2: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Outline

• CSIRO Probing Biosystems Future Science Platform

• Human 3D cell culture models – Lung: respiratory viruses

– Skin: chronic wound healing, new biomaterials, biosensing

• Challenges

CSIRO Health & Biosecurity

www.csiro.au

Page 3: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

CSIRO Probing Biosystems Future Science Platform

Point-of-care diagnostics • Blood biomarkers • Saliva (premature ageing) • Breath (asthma, air quality) • Nanochannels (virus detection)

Organ-on-a-chip •Disease mechanisms •Biomarker development •High throughput drug screening Respiratory & Vascular •Mechanisms of viral infection •Improved antiviral delivery 3D Tissue Models •Wound healing / infection control Brain – Functioning Blood Brain Barrier Gut organoid

Wearable & implantable

biosensors • Diagnostics • Real-time monitoring • Drug administration

Precision nanomedicine • Targeted drug delivery

Health surveillance & Biosecurity

https://research.csiro.au/biosystems/

Page 4: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

3D lung models to fight emerging respiratory viruses

1 World Bank (2013) http://www.worldbank.org/en/news/feature/2013/03/05/flu-outbreaks-reminder-of-pandemic-threat

Respiratory viruses are airborne and highly contagious

• We are vulnerable to pandemics and seasonal flu Human cost

– Spanish flu (H1N1) 1918: >50-100 million deaths

– SARS: 774 deaths, MERS: 449 deaths

Economic cost

– Next flu pandemic: US $3 trillion1

• Poor diagnostics

• No therapeutics or vaccines

• Animal models costly, not always representative

of the response in humans, long lead-time

• New disease models needed

CSIRO Health & Biosecurity

Page 5: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

• Primary lung epithelial and endothelial cells co-cultured on Transwells at the air liquid interface (ALI)

– Epithelial cells differentiate 21-27 days post-airlift to form ciliated, goblet (mucus-producing), club and basal cells

Corning Transwell insert

24-well plate well

Epithelial cells

Endothelial cells

Semi-permeable membrane

(0.4 μm pores)

ALI Medium

Air

Apical

Basolateral

Mucus secretion

Mimicking the human lung3

0.5 mm

3 Hermanns et al (2004) Lab. Invest. 84: 736–752

5 mm

CSIRO Health & Biosecurity

Immune cells

Page 6: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Epithelial cells

Endothelial cells ALI Medium

Air

Respiratory virus challenge

Characterise host-pathogen response e.g. cytokines, barrier integrity, cell viability, etc.

Test antiviral compounds

Immune cells

Infect cells with respiratory viruses

e.g. influenza, SARS, MERS

CSIRO Health & Biosecurity

www.csiro.au

Page 7: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

The next step: human lung-on-a-chip

• 3D microfluidic perfusion device to mimic blood flow More physiologically relevant system

Directional flow of nutrients, mechanical stress (breathing)

• Identify new disease biomarkers

• Fast fail therapeutic candidates

• Minimise use of animal models, saving time and money • Rapid response during a pandemic

• Test bacteria, nanoparticles, chemicals, toxicity

Wyss Institute

CSIRO Health & Biosecurity

www.csiro.au

Page 8: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Wyss Institute https://wyss.harvard.edu/; Huh et al (2010) Science 328:1662-1668. Licensed to Emulate, Inc.

Human lung-on-a-chip

Page 9: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

3D and 4D skin cell culture systems

Chronic wounds are a huge cost to Australia

• $3 billion cost to healthcare system p.a.4

• Over 400,000 people affected at any time4

Associated with diabetes, elderly, immune suppression, severe burns

Increased risk of bacterial infection, e.g. E. coli, S. aureus, P. aeruginosa

– Amputation in severe cases

• Create human skin models to study infection and inflammation

• New biomaterials

• Drug and gene delivery systems

4 AusHSI. Issues Paper: Chronic Wounds in Australia (2017)

Sally McArthur CSIRO Research+ Science Leader in Biomed. Manufact; Prof. Biomed. Eng. (Swinburne)

ulcers

Page 10: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

3D Skin Culture

• Creation of human skin using the Transwell system Keratinocytes differentiated at the air liquid interface (ALI) (epidermis)

Fibroblasts and collagen scaffold (dermis)

‘Wound’ skin culture by slicing or burning

Immune cells and bacteria added to simulate infection and inflammation

Test drugs and gene delivery systems

Sally McArthur CSIRO Research+ Science Leader in Biomed. Manufact; Prof. Biomed. Eng. (Swinburne)

www.csiro.au

Page 11: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Biosensing Real-time functional readouts

Sally McArthur CSIRO Research+ Science Leader in Biomed. Manufact; Prof. Biomed. Eng. (Swinburne)

www.csiro.au

4D Cell culture systems

Microfluidic device

Combine 3D models with biosensing and reporting

3D cell culture system

+ + Cell imaging

Advanced disease models New medical devices

Page 12: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Challenges

Physiologically relevant models

• Reliable, reproducible, scalable

• Cell source is critical Human primary cells / induced pluripotent stem (iPS) cells

• Model complexity Tissue structure (matrix scaffold) / appropriate cell types and numbers

• Sensors and real-time reporting

• 2D monoculture systems still useful

• Animal models needed for comparison

CSIRO Health & Biosecurity

www.csiro.au

Page 13: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Summary

3D cell culture & organ-on-a-chip models

• Multiple applications

• Complex disease models

• Personalised medicine

• Sensors and functional readouts for real-time patient monitoring

• Advanced healthcare devices to improve patient outcome

CSIRO Health & Biosecurity

www.csiro.au

Page 14: Developing 3D cell culture systems to combat human ...€¦ · Developing 3D cell culture systems to combat human pathogens & disease Probing Biosystems Future Science Platform Dr

Health & Biosecurity

• Michelle Baker

• Sinead Williams

• Mary Tachedjian

• Vicky Boyd

• Helen Dacres

AAHL

• John Bingham

• Megan Dearnley

• Diane Green

• Jean Payne

Manufacturing

• Carmel O’Brien

• Andrew Laslett

• Murat Gel

The University of Melbourne • Alastair Stewart

Monash University • Nico Voelcker • Tony Purcell • Tony Velkov

Swinburne University

• Sally McArthur

• Aleta Pupovac

• Zay Yar Oo

• Daniel Langley

• Sorel De Leon

• Charlie Wilson

University of Queensland

• Kirsty Short

CSIRO Health & Biosecurity

www.csiro.au

Acknowledgments