cd84 is a regulator of the immunosuppressive ......lewinsky et al. 1 cd84 is a regulator of the...
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CD84 is a regulator of the immunosuppressivemicroenvironment in Multiple Myeloma
Hadas Lewinsky, … , Steven Rosen, Idit Shachar
JCI Insight. 2021. https://doi.org/10.1172/jci.insight.141683.
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Research Hematology Oncology
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Lewinskyetal. 1
CD84isaregulatoroftheimmunosuppressive
microenvironmentinMultipleMyeloma
HadasLewinsky1*, EmineG.Gunes2,3*, KerenDavid1, LihiRadomir1,MatthiasP.Kramer1,
BiancaPellegrino1,MichalPerpinial1,JingChen8,Ting-fangHe8,AnthonyG.Mansour3,Kun-
YuTeng3, SupriyoBhattacharya9, EnricoCaserta2,3, EstelleTroadec2,3, Peter Lee8,Mingye
Feng8, JonathanKeats2,AmritaKrishnan2,3,MichaelRosenzweig2,3, JianhuaYu3,MichealA.
Caligiuri3, Yosef Cohen5, Olga Shevetz6, Shirly Becker-Herman1, Flavia Pichiorri2,3, Steven
Rosen2,3*andIditShachar1#
*Thetwofirstandlastauthorscontributedequallytothiswork
1DepartmentofImmunology,DepartmentofBiochemistry,WeizmannInstituteofScience,
Rehovot, Israel,2JudyandBernardBriskinCenter forMultipleMyelomaResearch,Cityof
Hope,Duarte,CA,USA;3DepartmentofHematologicMalignancies&TranslationalScience,
Beckman Research Institute, City of Hope, Duarte, CA, USA. 4Translational Genomics
ResearchInstitute,Phoenix,AZ,USA.5SanzMedicalCenter,LaniadoMedicalCenter,Netanya,
Israel. 6Hematology Institute, Kaplan Medical Center, Rehovot, Israel. 7Department of
ComputationalandQuantitativeMedicine,BeckmanResearchInstitute,CityofHope,Duarte,
CA, USA. 8Department of Immuno-Oncology, Beckman Research Institute, City of Hope,
Duarte, CA, USA. 9 Translational Bioinformatics, Center for Informatics, Department of
ComputationalandQuantitativeMedicine,CityofHope,Duarte,CA,USA.
#CorrespondingAuthor:IditShachar,DepartmentofImmunology,WeizmannInstituteofScience,Rehovot76100,Israel;Tel:972-8-9344257,Fax:972-8-9344141,Email:[email protected]
Lewinskyetal. 2
Abstract
Multiplemyeloma(MM)ischaracterizedbyanaccumulationofmalignantplasmacells(PCs)
withinthebonemarrow(BM).TheBMmicroenvironmentsupportssurvivalofthemalignant
cells and is comprised of cellular fractions that foster myeloma development and
progression, by suppression of the immune response. Despite major progress in
understanding thebiologyandpathophysiologyofMM, thisdisease is still incurable and
requiresaggressivetreatmentwithsignificantsideeffects.CD84isaself-bindingimmuno-
receptor belonging to the signaling lymphocyte activating molecule (SLAM) family.
Previously,weshowedthatCD84bridgesbetweenchroniclymphocyticleukemiacellsand
theirmicroenvironment,andregulatesTcellfunction.Inthecurrentstudy,weinvestigated
theroleofCD84inMM.OurresultsshowthatMMcellsexpresslowlevelsofCD84.However,
these cells secrete the cytokine, macrophage migration inhibitory factor (MIF), which
induces CD84 expression on cells in their microenvironment. Its activation leads to an
elevation of expression of genes regulating differentiation to monocytic/granulocytic-
(M/G)-myeloidderivedsuppressorcells(MDSCs)andupregulationofPD-L1expressionon
MDSCs,which together suppressT cell function.DownregulationofCD84or its blocking
reduceMDSCaccumulation,resultinginelevatedTcellactivityandreducedtumorload.Our
datasuggestthatCD84mightserveasanoveltherapeutictargetinMM.
Lewinskyetal. 3
Significance
Multiple myeloma (MM) is a hematological malignancy caused by an accumulation of
malignantplasmacellsinthebonemarrow(BM).Myeloid-derivedsuppressorcells(MDSC)
havebeenshowntoplayapivotalroleinregulationofthehostimmuneresponsesinMM.
OurresultsshowthatCD84regulatesimmunesuppressionbyaffectingMDSCdifferentiation
andfunction.Thus,CD84canserveasanoveltherapeutictargetinMMbyregulatingMDSC
functionandTcellmediatedanti-tumoractivity.
Highlights
1. CD84isexpressedonmultiplemyeloma-associatedmyeloidderivedsuppressorcells
(MDSCs)andregulatestheirfunctionandTcellactivity
2. In vivo ablation or blocking of CD84 in humanpatient samples andmice reduces
MDSCnumbersandactivity,resultinginenhancedfunctionalityofTcellsandreduced
tumorload.
Lewinskyetal. 4
Introduction
Multiple myeloma (MM) is a hematological malignancy caused by an accumulation of
malignantplasmacellsinthebonemarrow(BM).TheBMmicroenvironmentisknownto
havesupportiverolesforMMsurvival,growth,andcelladhesion-mediateddrugresistance.
ThemicroenvironmentoftheBMconsistsofcellularelementssuchasosteoblasts,stromal
cells, endothelial cells, osteoclasts and immune cells, and a non-cellular compartment.
Interactions between myeloma cells and other cells that are part of the tumor
microenvironment foster myeloma development and progression by suppression of the
immune response. The interactions of MM cells with accessory cells in their
microenvironmentregulatethetransformationoftheBMmicroenvironmentintoatumor
promotingenvironmentthroughasuppressiveimmunemilieucontainingcytokines,growth
factorsandchemokines(1-3).
Although themajority of studies have focused on the BM stroma and osteoclasts inMM
pathogenesis, less attention has been given to the potential role of additional cell types
involved inmodulation of the immune response (4-6). In recent years, myeloid-derived
suppressorcells (MDSC)havebeenshowntoplayapivotal role inregulationof immune
responses in cancer. MDSCs are comprised of a heterogeneous myeloid cell population
consistingofpathologicallyactivatedmyeloidprogenitorsandimmaturemyeloidcells,with
robust immunosuppressiveactivity (7). Inhealthy individuals,MDSCsarerareorabsent,
whileanincreasednumberofMDSCshavebeenidentifiedintumors(2).
It was recently shown thatMDSCsmediate suppression of T-cell responses through the
induction of T-cell anergy and T-reg development in the MM microenvironment (8),
rendering lymphocytes unable to control tumor infiltration and progression (9). The
immunecheckpointmolecule,Programmedcelldeath1(PD-1)togetherwithitstwoligands,
programmeddeath-ligand 1 (PD-L1) and 2 (PD-L2) are crucial for themaintenance of a
malignant pro-survival microenvironment (10). In addition, the checkpoint molecules
Lymphocyte-ActivationGene3(LAG-3),CytotoxicTLymphocyteAntigen-4(CTLA-4),2B4,
Tim-3andCD160playasignificantroleinexhaustionofTcells(11).
Thesignaling lymphocyteactivationmolecule(SLAM) familyofreceptorsarecellsurface
proteinsthatmodulatetheimmuneresponse(12).CD84(SLAMF5)isamemberoftheSLAM
family,which self-associates, forminghomophilicdimers, and ismostlyexpressedby the
Lewinskyetal. 5
hematopoietic cells (13-16). Previous studies have shown that CD84 regulates a novel
survivalpathwayinChronicLymphocyticLeukemia(CLL)(17).ItbridgesbetweenCLLand
variouscellsinthemicroenvironment,mediatingtheirinteractionbothinvitroandinvivo
(18). Inaddition,cell-cell interactionsmediatedbyCD84inhumansandmiceelevatethe
expression of PD-L1 on CLL and the surrounding microenvironment, as well as the
expressionofPD-1onTcells,regulatingtheTcellresponseintheCLLmicroenvironment
(19).
Inthepresentstudy,wefocusedonunderstandingthefunctionofCD84inMMcancercells
andtheirmicroenvironment.OurresultsdemonstratethatMMcellsexpressundetectableor
low levels of CD84. The malignant cells induce expression of CD84 on cells in their
microenvironmentbysecretionofthecytokine,macrophagemigrationinhibitoryfunction
(MIF).CD84regulatesPD-L1/PD-1andexhaustionmarkerexpressiononMDSCsandTcells,
respectively,resulting in thedownregulationof the immuneresponse. Invivoblockingof
CD84leadstoreducedaccumulationofMDSCsinthetumormicroenvironment,andelevated
activityofTcells,throughthecontrolofessentialfunctionalpathwaysinMDSCsleadingto
reducedtumorload.OurresultssuggestanoveltherapeuticstrategytargetingCD84inthe
MM microenvironment as a promising approach to induce T cell mediated anti-tumor
activity.
Lewinskyetal. 6
Results
CD84isexpressedonimmunosuppressivecellsintheMMmicroenvironment
MMcellsareprotectedfromapoptosisbyimmunosuppressiveaccessorycells,whicharean
integralpartoftheirmicroenvironment(8,20).TodeterminewhetherCD84playsarolein
theMMdiseaseandtofurtherunderstandtheinteractionofthesemalignantcellswiththeir
microenvironment, we first evaluated CD84 expression on MM (gating is shown in
SupplementaryFig1A).AsshowninFig.1A,anincreaseinCD84expressionwasdetected
onMMcellscomparedtoitsexpressiononcellsfrompatientswithmonoclonalgammopathy
ofunknownsignificance(MGUS),theprecursortoMM.AnalysisoftheMMRFCoMMpassIA9
dataset(SupplementaryFig1B)revealedlowlevelsofCD84mRNAinhumanMMcelllines.
UndetectabletolowexpressionofCD84wasfoundonhumanMMcelllines(Supplementary
Fig1C-D).The5TGM1MMplasmacelllineisacommonlyusedinamousemodelforMM
which (21).AnalysisofCD84expressionon5TGM1cellsderivedfromspleenandBMof
injectedmiceshowedsignificantlyhigherexpressionlevelsofCD84onBMcells,compared
to itsexpressiononthemalignantcellsderived fromthespleen(Fig1B),suggestingthat
CD84mighthaveanimportantroleintheBMmicroenvironment.
While the elevation in the expression of CD84 on malignant cells was minimal, the
upregulation of CD84 expression on cells derived from the tumor microenvironment
compared to its expression on healthy donorswas strongly enhanced. BM stromal cells
derivedfromMMpatientsexpressedhigherlevelsofCD84comparedtocellsderivedfrom
bothpatientswithsmolderingdiseaseandhealthydonors(Fig1C).Inaddition,analysisof
BMstromacellsderivedfromthe5TGM1MMmurinemodelshowedhigherlevelsofCD84
comparedtoitsexpressiononmicenotcarryingtumors(Fig1D).Asignificantupregulation
ofCD84expressionwasdetectedonBM-(Fig1E)andPB-(Fig1F)derivedhumanmyeloid
CD14+cells(around10timeshigher)comparedtoitsexpressiononCD14-cellsandCD14+
cellsderivedfromhealthyhumandonors,suggestingthattheCD14+populationhasamore
significantroleinMMpatients.
Next,theMDSCpopulationswereanalyzed(gatingisshowninSupplementaryFig1E).An
increasedabundanceoftheM-MDSCpopulationandCD14+cellswasdetectedinPBderived
fromMMpatients(SupplementaryFig1F-H).SinceMDSCsplayanimportantroleintumor
maintenance, CD84 expression was determined on M-MDSC (CD14+, CD11B+, HLA-DR-,
Lewinskyetal. 7
CD15-)andG-MDSCs(CD15+,CD11B+,HLA-DR-,CD14-)derivedfromBMpatientsamples.
Strikingly,asignificantelevationofCD84expressionwasobservedonbothcelltypesderived
from MM patients compared to its expression on cells derived from the earlier, pre-
malignant, stage of smoldering myeloma as well as from healthy BM (Fig. 2 A-B,
SupplementaryFig.1F).TofurthervisualizeCD84expressionontheMMmicroenvironment,
weusedt-distributedstochasticneighborembedding(t-SNE),whichisamethodtovisualize
high-dimensional data by graphing similar high-dimensional points close together and
dissimilarpointawayfromeachother.AsseeninFig.2CandSupplementaryFig2,clusters
composedofM-MDSCs,G-MDSCsandsomeoftheMMcellsexpressedCD84.Thesefindings
suggestthatCD84ismainlyexpressedonMDSCsderivedfromtheBMmicroenvironmentof
MMpatients.TheelevationofitsexpressionsuggeststhatCD84mightplayaroleinthecross
talkbetweenthetumorcellsandtheirmicroenvironment.
CD84activationupregulatesPD-L1expressionintheMMmicroenvironment
CD84waspreviouslyshowntoregulateexpressionofthePD-L1immunecheckpointligand
onmalignantCLLcellsandintheirmicroenvironment(19).WethereforeanalyzedPD-L1
expressiononMMcells, and cellsderived from theirmicroenvironment.Higher levelsof
surfaceexpressionofPD-L1weredetectedonBMstromalcellsofMMpatientscomparedto
its expression on cells from healthy donors (Supplementary Fig 3A), and in MMmouse
models compared to its expression BM stromal cells derived from tumor-free mice
(SupplementaryFig3B).TodirectlydeterminewhetherCD84regulatesPD-L1expressionin
MM,bonemarrowMMandstromalcellstakenfromMMpatientswerestimulatedwithanti-
CD84–activating antibody, as previously described (18, 19). PD-L1 mRNA and surface
proteinlevelsweresignificantlyelevatedinCD84activatedBMmyelomacells(Fig.3A)and
stromalcells(Fig.3B)derivedfromthepatients.Inaddition,activationofCD84expression
onthemurine5TGM1celllineinducedPD-L1expression(Fig.3C),anditsblockingusingthe
B4 blockingmAb (Supplementary Fig 3C; (18, 19)) lowered PD-L1mRNA (Fig. 3D) and
protein (Fig. 3E) levels compared to cells treated with an isotype control. Furthermore,
reducedexpressionofCD84in5TGM1cellsusingsiCD84resultedindownregulationofPD-
L1mRNAlevelscomparedwiththecellstransfectedwithcontrolsiRNA(Fig.3F).
Lewinskyetal. 8
Next, the regulationofPD-L1expressionbyCD84wasanalyzed inCD14+cells.Elevated
levels of cell surface PD-L1 were detected on CD84 activated healthy donor-derived PB
CD14+cells(Fig.3G).
Furthermore,PD-L1mRNAlevelswereelevatedinCD84activatedM-MDSCsandG-MDSCs
fromMMpatientBMaspirates(Fig.4A-B).ToconfirmtheeffectofCD84onPD-L1,M-MDSCs
(Ly6G-,Ly6C+,CD11b+,CD11c-)-andG-MDSCs(Ly6G+,Ly6Clow,CD11b+,CD11c-)from5TGM1
injectedmicewereblockedusingtheanti-CD84antibody,B4.Followingthismanipulation,
mRNAlevels(Fig.4C-D)aswellasproteinsurfaceexpression(Fig.4E-F)ofPD-L1were
significantlyreduced.
Next,theeffectofCD84expressedonMDSCswasanalyzed.SortedG-orM-MDSCsfromMM
injectedmiceweretreatedwithB4blockingantibodyoranisotypecontrol,incubatedwith
Tcells,andco-culturedfor72hrs.AsseeninFigs.4Gand4H,blockingCD84significantly
reducedthesuppressivefunctionofMDSCs,andincreasedCD8+TcelldivisionandIFN-γ
secretion.
To identify thedownstreamevents inducedbyCD84 that regulatePD-L1expression, the
signalingcascadeinducedbyCD84inTHP1 cellswasfollowed.Tothisend,weestablished
aCD84CRISPR/Cas9systeminthemonocyticcellline,THP1,withconstitutiveknockoutof
CD84expression(SupplementaryFig.3D).LackingCD84,downregulatedPD-L1expression
on thesecells (Fig.4I). StimulatingCD84withananti-CD84activatingantibodyonCD84
expressing THP1 cells resulted in significantly elevated surface protein levels of PD-L1
comparedtocellstreatedwithIgGcontrolantibodies(SupplementaryFig3E).Inaddition,
asshowninFig.4J,levelsofpAKTandpS6whosepathwaysregulatePD-L1expression(22)
weremarkedlyincreaseduponCD84stimulation.
Next, we wished to understand whether CD84 induces an immunosuppressive
microenvironment in MM patients. PB CD14+ cells derived from healthy donors were
incubatedaloneorinthepresenceofthehumanMMcellline,MM.1SandhealthydonorT
cells,inthepresenceorabsenceofcontrolIgG2aortheB4blockingmAbs.Theexpression
ofPD-L1/PD-1andcellsurvivalwereanalyzed.TheMM.1Scelllineinducedexpressionof
PD-L1ontheCD14+cells(Fig.5A)andPD-1onTcells(Fig.5B).Thiseffectwasabrogatedin
thepresenceoftheanti-CD84blockingantibody,B4.Inaddition,blockingCD84elevatedthe
TcellmediatedkillingofMMcelllines,indicatedbyincreased7AADstainingoftheMMcell
Lewinskyetal. 9
line(MM.1SGFP+/Luc+)(Fig.5C),andincreasedchromiumreleasebyMMcellsinakilling
assay(SupplementaryFig3H).
We further analyzed the effect of CD84 blocking on primary human MM bone marrow
aspiratesfromMMpatients.BMaspiratesweretreatedinculturewitheithercontrolIgG2a
ortheB4mAbs,andthesurvivalofthecellswasanalyzed.AsseeninFig5D,blockingCD84
inducedapoptosisofthemyelomacells,leadingtoreducednumbersofthesemalignantcells.
ThistreatmentalsodownregulatedPD-L1surfaceexpressionontheMMcells(Fig.5E).In
addition, blocking CD84 reduced the numbers ofM-MDSCs (Fig. 5F) and lowered PD-L1
expressiononthesecells(Fig.5G).ThistreatmenthadalmostnoeffectonthenumberofG-
MDSCs (Fig.5H),while the levelsofPD-L1were reducedon thesecells, aswell (Fig.5I).
Furthermore,blockingCD84reducedtheexpressionoftheTcellexhaustionmarkersPD-1,
LAG-3andCTLA-4on thesurfaceofCD4andCD8Tcells, respectively (Fig5 J-K).Taken
together,theseresultsshowthatCD84regulatesimmunosuppressionandTcellactivityin
MMpatientsamples.
CD84expressioniselevatedinaMIF-dependentmannerintheMMmicroenvironment
MMcellsexpressundetectabletolowlevelsofCD84,whilecellsintheirmicroenvironment
expresshighlevelsofthisreceptorinthepresenceofthetumor.Wethereforehypothesized
thattheinductionbytheMMcellsofCD84andPD-L1expressiononthesurroundingcells
maybemediatedby secretionof cytokines.Todeterminewhethermyelomacells induce
CD84andPD-L1expressionontheirmicroenvironment,healthydonorderivedPBCD14+
cellswereincubatedaloneorinthepresenceofthreedifferenthumanMMcelllinesMM.1S,
U266andKMS11,whichdonotexpressCD84(SupplementaryFig.1C-D),andPD-L1and
CD84surfaceproteinlevelswereanalyzedafter48hrs.TheMMcelllinesinducedincreased
cellsurfacelevelsofCD84(Fig.6A)andPD-L1(Fig.6B)ontheCD14+cells.
Wehavepreviouslyshownthatthecytokine,macrophagemigrationinhibitoryfactor(MIF),
inducesCD84expression inCLLcellsbybinding to its receptorCD74(17).We therefore
sought to determinewhether the upregulated expression of CD84 on cells in the tumor
microenvironment ismodulatedbyMIF.MIFproteinexpression levels inhumanMMcell
lineswereanalyzedusingwesternblotanalysis.AsdemonstratedinFig6C,MIFwashighly
expressedinthehumanMMcelllines.
Lewinskyetal. 10
To determine whether MM cells induce CD84 and PD-L1 expression on their
microenvironmentinaMIF-dependentmanner,PBCD14+cellsfromthreedifferenthealthy
donorsortheTHP1monocyticcelllinewereincubatedaloneorinthepresenceofhuman
recombinantMIF.After48hrs,surfaceproteinlevelsofCD84andPD-L1weremeasuredon
thesecells.MIFactivationelevatedexpressionofCD84andPD-L1onthesecells(Fig6 D-E).
Next, stromatakeneither fromhealthymice(Fig6F)orMMinjectedmice(Fig6G)were
incubatedwithrecombinantmurineMIF.MIFstimulationupregulatedCD84expressionon
stromafrombothuntreatedandMM-injectedmice.
To demonstrate that MIF secreted from the malignant cells regulates CD84 and PD-L1
expressiononcellsinthetumormicroenvironment,MIFexpressionwasknockeddownin
MM.1Scells.Reductionofabout40%inMIFmRNAlevelswasobservedincellstransfected
withsiMIF(SupplementaryFig.2F-G).SupernatantcollectedfromMM.1Stransfectedwith
MIForcontrolsiRNAwasthentransferredtoisolatedCD14+PBMCsderivedfromahealthy
donor and CD84 and PD-L1 expression levels on the CD14+ cells were analyzed.
DownregulationofCD84(Fig.6H)andPD-L1(Fig.6I)cellsurfacelevelsweredetectedon
cellsincubatedwiththeconditionedmediumcontainingreducedlevelsofMIF.
TofurtherevaluatetheeffectofMIFonCD84andPD-L1expressiononCD14+cells,healthy
donor-derivedPBCD14+cellswereincubatedaloneorinthepresenceofthehumanMMcell
lineMM.1SinthepresenceorabsenceoftheMIFinhibitor,ISO-1.InhibitionofMIFsignaling
activitysignificantlyreducedcellsurfaceexpressionofCD84(Fig7A)andPD-L1(Fig7B)on
CD14+cells.Moreover,thePBMCobtainedfromhealthydonorsgainedinducedabilitytokill
MM1.SGFP+/LucandRajicellsinthepresenceofISO-1(Fig7CandSupplementaryFig3H-
I).Thus,MIFregulatesCD84andPD-L1expressionlevelsonCD14+cells.
Finally,wholeBM frommicebearingMMwere treatedwith ISO-1and thepercentageof
CD84 on G- or M-MDSCs was determined. ISO-1 treatment significantly reduced the
expressionofCD84onMDSCsderivedfrommicebearingMM(Fig7D-E).
Together,theseresultsshowthattheexpressionandfunctionofCD84areregulatedbyMIF
secretedfromthemalignantcells.
CD84regulatesfunctionalandimmunosuppressivepathwaysinhumanMMMDSCs
Lewinskyetal. 11
MDSCsplayanimportantroleinthesupportofMMcells(8).Sincethesecellshighlyexpress
CD84duringMMprogression,wenextwishedtofollowthepotentialdirectroleofCD84on
thesecells.
SortedG-MDSCsorM-MDSCsderivedfrompatientbonemarrowaspirates(Supplementary
Fig4.A-B)wereactivatedwitheitherCD84orIgGcontrolantibodies.After24hrs,RNAwas
purified,andactivationwasconfirmedbyelevationofPD-L1expression.RNAsequencing
was conducted using Mars-seq. Principal component analysis (PCA) and dendrogram
analysisshowedthatthesamplescouldbeidentifiedaseitherCD84activatedorIgGcontrol
treatmentbasedonsimilarityingeneexpressionprofiles(SupplementaryFig4C-D).CD84
activatedM-MDSCcellsdifferentiallyexpressed433genes(determinedasgeneswithap
value<0.05andabasemeanofmorethan5,afteradjustmentwiththeRpackagefdrtool).
Thesegenesweredividedintoclustersofupregulatedanddownregulatedgenes(Fig.8Aand
SupplementaryFig.4E).Eachclusterwasthenanalyzedforgeneontologypathwaysusing
EnrichR. The downregulated cluster did not contain pathways related toMDSC function
(resultsnotshown).However,intheupregulatedgenes,pathwaysrelatedtoMDSCfunction
wereidentified(Fig.8B,SupplementaryFig4F),includinggenesrelatedtoROSproduction,
Ragereceptorbinding,andabnormalTcellselection.
A more detailed analysis revealed genes including S100A9, CYBA (p22phox) and CCL5,
related to the above pathways (Fig 8C). It was previously shown that in the absence of
S100A9,theMDSCpopulationisreduced,resultinginreducedtumorsizeintumorbearing
mice, while its overexpression leads to an accumulation of MDSCs and impaired DC
differentiation(23).CYBA(P22phox)isasubunitoftheNADPHoxidase(NOX2),andNOX2
is the main source of ROS, used by MDSCs to suppress T cells (24). Further, CCL5 has
previously been shown to play an important role in tumor progression, by inhibiting
infiltrationofCD8+TcellsandincreasingthemigrationofMDSCsintothetumorarea(25,
26).WenextvalidatedtheregulationofexpressionofthesegenesbyCD84inCD84activated
sortedhumanM-MDSCsfromMMbonemarrowaspirates.S100A9mRNA(Supplementary
Fig.4G)andCYBAmRNA(SupplementaryFig4H)wereupregulatedinCD84activatedcells.
BlockingCD84onwholeculturesofprimarypatientMMbonemarrow,reducedS100A9(Fig.
8D) and CYBA (Fig. 8E) in M-MDSC cells. Moreover, blocking CD84 by the B4 mAb
significantlydecreasedthemRNAandproteinexpressionofS100A9(Fig.8F)andCYBA(Fig.
Lewinskyetal. 12
8G)inmouseM-MDSCsfrom5TGM1injectedmice.Together,thissuggeststhatCD84affects
pathwaysregulatingthefunctionalityofM-MDSCs.
Activation of G-MDSC cells resulted in fewer differentially expressed genes. Principal
componentanalysis (PCA)anddendrogramanalysis showed that the sequencedsamples
couldbe separated into eitherCD84activatedor IgG control treatment groupsbasedon
similarityingeneexpressionprofiles(SupplementaryFig4I-J).Thesegenesweredivided
intoupregulatedanddownregulatedclusters,andanalyzed(Fig9AandSupplementaryFig
4K).Whilethedownregulatedclusterswerenotassociatedwithnoteworthypathways(not
shown),theupregulatedclusteredgeneswererelatedtotheHIF1αnetworkandabnormal
neutrophilphysiology(Fig9BandSupplementaryFig4L).Wethenfollowedseveralspecific
upregulated genes, CMTM6,HIF1α (included due to upregulated pathway gene ontology
terms, although p value=0.18), EP300, and BCL2A1 (Fig 9C). CMTM6 is a known PD-L1
regulatoronmanycancercelltypes(27). ThetranscriptionfactorHIF1α,togetherwithits
co-activator EP300, regulatesmany genes involved in the hypoxia response. Previously,
HIF1αhasbeenshowntohavearolebothindifferentiationandPD-L1expressiononMDSCs
(28).OverexpressingBCL2A1specificallyonG-MDSCswasshowntoincreasethesurvivalof
G-MDSCsandtheirsuppressivecapabilities(29).
TheexpressionofthesegenesfollowingCD84activationwasvalidatedbyRT-qPCR.CMTM6
(SupplementaryFig.4M),BCL2A1(SupplementaryFig.4N)andHIF1α(SupplementaryFig.
4O) mRNA levels were upregulated in sorted G-MDSCs from human MM patients.
Furthermore,blockingCD84usingtheB4antibodyonwholeculturesofprimarypatientMM
bonemarrow,alsoreducedtheexpressionofCMTM6(Fig.9D),BCL2A1(Fig.9E)andHIF1α
(Fig. 9F).Moreover, blocking CD84 by B4mAb, reduced RNA and protein expression of
CMTM-6(Fig.9G)andBCL2A1(Fig.9H)inmouseG-MDSCs.Inconclusion,CD84regulates
pathways that are important for both MDSC development and suppressive function. In
addition,CD84servesdifferent,yetimportant,rolesinthetwoMDSCsubsets.
TheinvivoroleofCD84inMM
TodeterminetheinvivoroleofCD84inMM,5TGM1murineMMcellsandMM.1Shuman
myeloma cells were I.V. injected into syngeneic immune-competent KaLwRij mice
(SupplementaryFig.5A,Fig.10A)orintoimmuno-deficientNSGmice(SupplementaryFig.
Lewinskyetal. 13
5B),respectively, leadingtoasignificantincreaseinMDSCnumbersinthePB(Fig.10Aand
SupplementaryFig.5C),toincreasedCD84expression(Fig10BandSupplementaryFig5D)
onMDSC cell surface and to increased PD-1 cell surface expression onBMCD8+T cells
(SupplementaryFig5E).
TodirectlyanalyzetheroleofCD84expressedonthemicroenvironmentinvivo,chimeric
miceweregenerated.CD84-/-orWTmicewerelethallyirradiatedandinjectedwithKaLwRij
BMcells.After2months,5TGM1cellswereinjectedintothesemice,andafteranadditional
3weeks, themicewere sacrificed, and their BM, blood and spleenswere harvested and
examined(SupplementaryFig5F).DeficiencyofCD84onstromacellsresultedinareduction
in tumor load in the bonemarrow (Fig. 10C) and spleen (Fig. 10D), resulting in smaller
spleensize(SupplementaryFig5G)aswellasreducedIgG2bintheblood(Fig.10E).PD-L1
expressionontheMMcellswasdownregulatedinbothcompartments(Fig.10F).Analysisof
theMDSCpopulationsrevealedthatmicedeficientinCD84ontheirstromacellsshoweda
significantreductionintheabundanceofM-MDSCs(Fig.10G),whichexpressedlowerlevels
ofPD-L1(Fig.10H).
Furthermore,lowerlevelsofG-MDSCswereobservedintheBM(Fig.11A).PD-L1cellsurface
expression on these cells was downregulated, as well (Fig. 11B). These results further
emphasizetheroleofCD84asaregulatorofMDSCnumberandfunction.AnalysisofTcells
derived from the chimeric mice lacking CD84 on stroma revealed reduced levels of
exhaustionmarkers, among themPD-1, aswell as an increase in IL-2, IFNγ,GRZMBand
LAMP-1intheBM(Fig.11C),andspleen(Fig.11D-E).Thus,CD84expressedonstromacells
in the tumor microenvironment regulates immunosuppression through MDSCs and
functionalityofTcells,whichtogetherresultinthesupportofMMcellviability.
We furtheranalyzed theroleofCD84 inMMinCD84-/-mice thatwerebackcrossedwith
C57BL/KaLwrij mice for 6-7 generations. 5TGM1 cells were I.V. injected to the CD84-/-
/KaLwrij or C57BL/KaLwrij mice and mice survival was followed. CD84 deficiency
significantly enhanced the survival of the injected mice (Fig 12A). Furthermore, mice
sacrificedondays25-28daysshowedasignificantlyreducedtumorloadintheBM(Fig.12B)
and spleen (Supplementary Fig. 6 A-B), and their spleen size was smaller (Fig. 12C).
Furthermore, PD-L1 cell surface levels were reduced on MM cells in the spleen
(SupplementaryFig.6C).AnalysisofMDSCsinthesebackcrossedmicerevealedareduced
Lewinskyetal. 14
number of M-MDSCs in the BM (Fig. 12D), spleen (Supplementary Fig. 6D) and blood
(SupplementaryFig.6E).DeficiencyofCD84resulted in lower levelsofPD-L1(Fig.12E),
S100A9(Fig.12F)andCYBA(Fig.12G)comparedtotheirexpressiononWTBMM-MDSCs.
TheexpressionofPD-L1wasalsoreducedonPBM-MDSCslackingCD84(Supplementary
Fig.6F).
CD84-deficientG-MDSCswerereducedinthespleenandblood(SupplementaryFig.6G-H),
whilenochangewasfoundintheBM(Fig13A).TheCD84-deficientBMG-MDSCsexpressed
significantlyreducedlevelsofPD-L1,BCL2A1andCMTM6comparedtoWTG-MDSCs(Fig
13B-D),andbloodG-MDSCsexpressedlowerlevelsofPD-L1onthesecells(Supplementary
Fig 6I). Thus, deficiency of CD84 on MDSCs reduces the number of MDSCs and their
immunosuppressivefunctionsinvivo.
Next,theeffectofCD84onBMTcellswasstudied.BMCD84-/-Tcellsexpressedreduced
levels of the exhaustion markers PD-1, LAG-3, CTLA-1, 2B4 and KLRG1 (Fig. 13E,
SupplementaryFig.6J-L,andrepresentativehistogramsinSupplementaryFig6M),whileno
changewasobservedintheexpressionofthesemarkersonsplenicTcells(Supplementary
Fig6N).Inaddition,theCD84-deficientsplenic(Fig13F)andBM(Fig13G)Tcellselevated
the expression of cytotoxic factors. Thus, CD84 deficiency in the environment of mice
injectedwithMMresultsinasignificantreductioninMDSCimmunosuppression,resulting
inasignificantincreaseinTcellactivity,leadingtoasignificantreductionintumorload.
Therapeuticinterferenceusingtheanti-CD84blockingantibody
TodeterminewhetherCD84canserveasapotentialtargetfortreatmentofMM,itsactivity
wasblocked invivoby injectionwith theB4,anti-CD84blockingmAb.5TGM1cellswere
injectedintotwogroupsofsyngeneicKaLwRijmice,and2weekslaterthemicewereinjected
witheitherIgG2acontrolmAborB4anti-CD84(SupplementaryFig,7A).2daysafterthelast
of the five injections, mice were sacrificed, and tumor load, MDSCs number and PD-L1
expression, as well as T cell functionality were examined. B4 mAb treatment led to a
significantdecreaseinmalignantcellnumbersintheBM(Fig.14A),inspleensizeandcell
number(Fig.14BandSupplementaryFig7B-C),and in levelsof IgG2b intheblood(Fig.
14C), leadingtoincreasedsurvivalofthemice(Fig.14D).Furthermore,whiletheisotype
Lewinskyetal. 15
controlmAbinjectedmicewereallparalyzedbyday31,40%ofmAbB4injectedmicewere
stillabletowalk(Fig.14E).
Next,theMDSCpopulationswereanalyzed.BlockingCD84reducedtheaccumulationofM-
MDSCsinthebonemarrow(Fig.14F)andledtodecreasedexpressionofPD-L1onthese
cellsinBM(Fig.14G),blood(SupplementaryFig.7D)andspleen(SupplementaryFig.7E-F).
NodifferenceinthenumberofG-MDSCcellswasdetectedintheBM(SupplementaryFig.
7G); however, PD-L1 expression levels on these BM, spleen and blood-derived cellswas
reduced(Fig14HandSupplementaryFig7H-J).
Next,asignificantelevationintheexpressionofTcellexhaustionmarkersonBM(Fig.14I)
andspleen(Fig.14J,withrepresentativehistogramsshowninSupplementaryFig.7K)and
splenicCD8productionofthecytokinesIL-2andIFNγ,andofthemarkersofcytotoxicity
GRZMBandLAMP-1(Fig.14K)wasobservedinB4mAbtreatedmice.Noeffectwasobserved
onthenumberofTregs(SupplementaryFig.7L)orPD-1expression(SupplementaryFig.
7M)onTregsintheBM,showingthatCD8+cellsaretheprimaryaffectedTcellpopulation.
Finally,thedosedependenteffectoftheB4mAbtreatmentwasanalyzed.AsseeninFig15A,
thepercentageofmyelomacellsinthebonemarrowdecreasedby50percentinmicetreated
with30µgB4/mouse,andbycloseto75percentinmicetreatedwith200µgB4/mouse,
comparedtomicetreatedwith200µg/mouseIgG2acontrol,withasimilartrendfoundin
thespleen(SupplementaryFig.8A-B).Inaddition,whilethelowestdoseofB4mAbdidnot
affectPD-L1expressiononthe5TGM1cellsthemselves(datanotshown),thehigherdose
had an effect in the BM (Fig. 15B) and spleen (Supplementary Fig. 8C). Similarly, the
abundanceofBMM-MDSCs (Fig.15C), splenicM-MDSCs (SupplementaryFig.8D),BMG-
MDSCs(Fig.15D),PD-L1expressiononM-MDSCs(SupplementaryFig.8E),splenicG-MDSCs
(SupplementaryFig.8F)andPD-L1expressiononG-MDSCs(SupplementaryFig.7G)was
alsoaffectedinadosedependentmanner,thoughbonemarrowG-MDSCsonlydecreased
relativetocontrolatthehigherdoseof200µgB4/mouse.Moreover,toshowtheeffectof
CD84blockingonMDSC function,Arginase-1and iNOSexpression levelswereexamined.
MDSCderivedArginase-1and iNOSareknownTcell suppressionpathways thatoperate
throughmetabolismofL-Arginine(30,31).Thehigherdoseof200µgB4/mousereduced
Arginase-1expression inG-andM-MDSCs(Fig.15E-Fwithrepresentativehistograms in
Lewinskyetal. 16
SupplementaryFig.8H-I)andiNOSinM-MDSCs(Fig.15Gwithrepresentativehistogramsin
Supplementary Fig. 8J). In addition, T cells were analyzed under these conditions. All
exhaustionmarkersdecreasedinresponsetotreatment,inadose-dependentmanner(Fig.
15H).
Taken together, blockingCD84, canbeused to reduce the expansionofMDSCs and thus
decreasetheimmunosuppressivemicroenvironment,resultinginincreasedTcellactivation,
whichinturnleadstoadecreaseintumorload.
Lewinskyetal. 17
Discussion
Multiplemyelomaisconsideredanincurabledisease,despitetheimprovedunderstanding
ofitsunderlyingdiseasebiologyandthesuggestionofpotentialtherapies.Theroleofthe
microenvironmentandimmunefunctionhavebeenextensivelystudiedinthisdisease.The
main dysregulated subsets within the MMmicroenvironment are Tregs, Th17, DCs and
MDSCs (32). T cells display an exhausted phenotype in this malignancy, showing
downregulatedexpressionofactivatingreceptorsandupregulatedexpressionofexhaustion
markers,suchasPD-1(33,34).Moreover,uponstimulation,TcellsfromMM-bearingmice
expressreducedlevelsofLAMP-1,aproteinmarkingdegranulationofcytotoxicvesicles,and
secretesignificantlylessIFNγthantheircounterpartsfromhealthymice,furtherindicating
theirreducedanti-tumorcapabilities(35).
The cell surface receptor CD84 mediates the interaction of CLL cells with their
microenvironment (18), and regulates PD-L1 expression on CLL cells and their
microenvironment,resultingintheregulationofTcellsintheBM(19).Thecurrentstudy
focusedontheexpressionandfunctionofCD84onMMcellsandtheMMmicroenvironment.
Weshowthatthecytokinemacrophagemigrationinhibitoryfactor(MIF)released
fromtheMMcellsupregulatesCD84expressiononcellsintheirmicroenvironment,
andthatPD-L1expression is inducedonthesecells. Inaddition,Tcellsderived fromthe
tumormicroenvironmentexpresselevatedlevelsofPD-1,whichinhibitstheirfunctionality
and controls their immunosuppressive behavior. Our results demonstrate that blocking
CD84reducesPD-L1expressiononcellsintheMMmicroenvironment,andPD-1expression,
inadditiontootherTcellexhaustionmarkerssuchas2B4,CTLA-4,KLRG-1andLAG-3,onT
cells,resultinginelevatedTcell immunityleadingtoasignificantdecreaseintumorload
bothinaninvivomousemodelandinpatient-derivedsamples.
BothM-andG-MDSCsaccumulateinMMpatientsandaffecttumorprogression(36).MDSCs
are classified as a heterogeneous collection of immunosuppressive cells derived from
myeloid progenitors. These cells are mostly composed of granulocytic- and monocytic
MDSCs, and are an important component in many different types of tumor
microenvironments.TheysupportthetumorbysuppressingtheTcell-antitumorresponse,
mediated by reactive oxygen species, arginase andnitric acid synthase (37). In addition,
thesecellsexpresshighlevelsofPD-L1inthetumortissue(37,38).
Lewinskyetal. 18
Our results showan important regulatory role forCD84 in the functionofMDSCs. CD84
controlstheexpressionofS100A9inthesecells.S100A8andS100A9havebeenshownto
regulatesthedifferentiationofMDSCsattheexpenseofmaturecells,suchasdendriticcells
andmacrophages. In addition, S100A8 and S100A9 also act as chemoattractants for the
MDSCs(39).Furthermore,CD84upregulatestheexpressionofCYBAandPD-L1onM-MDSCs
in the environment of themalignant cells. The NADPH oxidase complex is composed of
p40phox, p47phox, p67phox, gp91phox and CYBA (p22phox), which generate reactive oxygen
species (ROS) (40).Theexpressionof thesesubunits isupregulated inM-MDSCs isolated
from non-small cell lung cancer patients controlling the immune suppression of T cells
mediatedbyROS(41).Inaddition,theelevateddifferentiationofMDSCsinducedbyS100A9
hasbeenattributedtoROSandNADPHoxidase,therebylinkingCYBAandS100A9(42),as
essentialpathwaysforM-MDSCfunction.
In G-MDSCs, CD84 induces the expression HIF1a and CMTM6, BCL2A1 and PD-L1. The
transcriptionfactorHIF-1ahasbeenimplicatedasaregulatorofbothdifferentiationand
PD-L1expressioninthesecellsbydirectlybindinghypoxiaresponseelementsinthePD-L1
promotorinMDSCs(28,43).StabilizingHIF1αexpressiondecreasesbothproliferationand
IFNg secretion of T cells, and upregulates known suppressive pathways in MDSCs (43).
BCL2A1, a member of the anti-apoptotic BCL2 family, has a pro-survival function. Its
overexpressioninG-MDSCssignificantlyincreasesthesuppressionofTcellproliferationand
IFNgsecretionresultinginelevatedtumorload(29).
OurstudyshowsthatMMcellsinduceexpressionofCD84oncellsintheirmicroenvironment
bysecretionofthecytokineMIF.BlockingorknockingoutCD84inmiceleadstoareduction
in the levels of bothM- andG-MDSCs, aswell as reduction in their immunosuppressive
pathways, leadingtoaninducedanti-tumorresponsebyTcellsandareductionintumor
load. In addition, treating mice or human MM patient samples with anti-CD84 blocking
antibodyreducestheamountofMDSCsandtheirimmunosuppression,leadingtoanincrease
intheanti-tumorresponseofTcells,resultinginreductionintheamountoftumorcellsina
dosedependentmanner,andincreasedmousesurvival.
Together,theseresultssuggestthatCD84playsakeyroleinregulatingthefunctionofMDSCs
duringMMprogression,and itsblockadecanreducethenumberof tumorcellsandtheir
Lewinskyetal. 19
immunosuppressiveproperties,evenaftertheMMtumorhasalreadybeenestablished;this
rendersCD84anattractivetargettotreatimmunosuppression,leadingtoanincreaseinthe
Tcellmediatedanti-tumorresponseinMM.
Finally,treatmentofMMinjectedmicewithbothanti-PD1andanti-PD-L1hasbeenshown
to completely eliminate myeloma cells in MM mice. Initial studies of single-agent PD-1
blockadedidnotresult inaclinicalbenefit.ResultsofthephaseI/IIandIIItrialsofPD-1
blockadewithubiquitinationandproteasomaldegradationofIkarosfamilyproteinsI(MiD
) anddexamethasone inMMhad identified apatientpopulationwithpotential toderive
clinicalbenefitfromthistreatmentapproach.However,clinicaltrialsincludinganti-PD-1in
combination with other treatments have been paused or halted due to serious adverse
eventscausedbythetreatment(44).
Further,micelackingPD-1orPD-L1spontaneouslydevelopautoimmunediseases(45,46),
whilemice lackingCD84havebeendescribedasgrossly indistinguishable fromWTmice
(47). Our results show that CD84 can regulate PD-1, PD-L1 and additional exhaustion
markers.WethereforebelievethatblockingCD84mayreducetheimmunosuppressionthat
accompaniesMMwithfeweradverseevents.
Lewinskyetal. 20
MaterialsandMethods
Mice
C57BL/KaLwRijHsd(Harlan)CD84deficient(CD84-/-)(47)micewereusedat6-8weeksof
age.Themicewereageandsexmatchedineachexperiment.
Cells
The5TGM1mouse cell linewasakindgift fromProf.Oyajobi at theUniversityofTexas
HealthScienceCenteratSanAntonio,Texas.Thecellswereculturedin10%RPMIwith10%
FCS.
MMprimary cells-A list ofpatient characteristics isprovided inSupplementaryTable1.
HealthyBMsamplesaredefinedassampleswithoutanyevidenceofabnormality,aschecked
BMsmearandbiopsy.
HumanMMcell lines(MM.1S,NCI-H929,KMS-11,RPMI-8226,MM.1RandU266),andthe
THP1 monocytic cell line were purchased from ATCC; L363 cells were purchased from
GermanCollectionofMicroorganismsandCellCultures.HumanMMcelllinesandTHP1were
culturedin10%RPMI-1640,100IU/mlpenicillinand100µg/mlstreptomycin.
PrimarymousestromalcellswerecollectedfromthefemurandtibiabyflushingouttheBM,
andseededon24wellplatesonFCS.After1hr,10%FCSRPMImediumwasaddedandthe
cellsweremaintainedbywashingofnonadherentcellsandweeklychangingofthe10%FCS
RPMImedium.
RNAisolationandqRT-PCR
Total cellularRNA frompatients ormouseMDSCswaspurifiedusing thedirect-zolRNA
purification kit (Zymogen). cDNA was prepared using the qScript cDNA Synthesis Kit
(Quantabio).Quantitativerealtime-PCRwasperformedusingSYBRgreen(Roche).Primers
arelistedinSupplementaryTable2.
Total cellularRNA fromtheTHP1cell linewasextractedbyTRIZOLreagent followedby
preparation of cDNA. Quantitative real time-PCR (qRT-PCR) was performed using the
TaqMan method according to the manufacturer’s instructions. The TaqMan probes for
mRNA quantification were purchased from Applied Biosystems, and all reactions were
Lewinskyetal. 21
performed in triplicate. OAZ1 was used as endogenous control to normalize CD84
expression.
Stainingforflowcytometry
CellswerestainedusingspecificantibodiesaslistedinSupplementaryTable3.Intracellular
stainingofTcells,wasperformedaspreviouslydescribed(19).Forintracellularstainingof
MDSCs, cells were stained for surface markers and then fixed with either the
Fixation/Permeabilization Solution Kit (BD Bioscience) for cytoplasmic proteins, or
Fixation/PermeabilizationConcentrateandDiluent(Thermofisher)fornuclearproteins.
Westernblot
Protein lysis,separationandtransferwereperformedaspreviouslydescribed(19).Blots
wereprobedusingantibodiesagainstbeta-Actin(SantaCruz)asahousekeepinggene,anti-
CD84(SantaCruz),anti-phosphoAKT,anti-phosphoS6(Cellsignaling),andanti-PD-L1.The
bandswerethendetectedusingECLWesternBlottingSubstrate.
CD84stimulationofhumancells
CD84stimulationwasperformedaspreviouslydescribed(17-19).
CD84blockingbytheB4mAboncells
CD84blockingwasperformedaspreviouslydescribed(17-19).
MIFstimulationonhumancells
MIF stimulation was performed using CD14+ cells isolated from primary samples of
peripheralbloodwithCD14microbeadsaccordingtothemanufacturer'sinstructions.1×106
CD14+ purified cells were incubated in RPMI medium containing 200 ng/ml of human
recombinantMIFat37°Cfor18–24hrs.
Mousebonemarrowstromal cellswere first starvedwith0.1%RPMImedium for3hrs,
incubatedwith100ng/ml ofmouse recombinantMIF at 37°C for 48hrs, and thereafter
stainedforflowcytometry.
Lewinskyetal. 22
MIFblockingbytheISO-1MIFinhibitoryonhumancells
ForMIFblocking,1×106isolatedCD14+cellswereincubatedfor48hrsin1ml1%FCSRPMI
mediumcontaining100μMof theMIFantagonist, ISO-1(Sigma- Aldrich, catalognumber:
478336-92-4).
Co-cultureofCD14+cellswithhumanMMcelllines.
HumanperipheralbloodCD14+cellswereisolatedusingCD14microbeads(catalognumber:
130-050-201,Miltenyl)accordingto themanufacturer's instructions. IsolatedCD14+ cells
wereco-culturedwithhumanmyelomacelllinesfor48hrs.Followingculture,CD14+cells,
stainedwithantibodies,wereanalyzedusingflowcytometry.
RNAsequencing
Sorted G-MDSCs orM-MDSCswere treatedwith activating CD84 antibody or control, as
describedabove,andRNAwasthenpurified.AbulkadaptationoftheMARS-Seqprotocol
(48)wasutilizedtogeneratetheRNA-SeqlibrariesforexpressionprofilingofbothG-MDSCs
andM-MDSCs.
CD84activatedgenesinG-MDSCwereclassifiedasdifferentiallyexpressedbasedonacut-
offofp-value<0.05beforecorrectionswithabasemean>=5,andalog2foldchangeof0.58/-
0.58(1.5or-1.5foldofIgGvalues).CD84activatedM-MDSCgenesthatwereclassifiedas
differentiallyexpressedbythecut-offofp-value<0.05afterp-valuecorrections,withabase
mean>=5andalog2foldchangeof0.58/-0.58(1.5or-1.5foldofIgGvalues).
AnalysisandvisualizationofRNA-seq
HeatmapandvolcanoplotswerepreparedusingtheparametersstatedaboveusingRstudio
version3.6.2andthelibrariesdendextend,pheatmapandggplot2.Geneontologyanalysis
wasconductedwithRstudioversion3.6.2usingthedatabaseEnrichR.
Principal component analysis anddendrogramanalysis of sampleswas performedusing
Spyder version3.3.6Python3.7with the librariesnumpy,matplotlib.pyplot, sklearn and
scipy.
Chimericmice
Lewinskyetal. 23
6-8weekoldWTorCD84−/−micewere lethally irradiatedwith1050Rad.Thenextday,
1x106C57BL/KaLwRijmousebonemarrowcellswereinjectedintothetailveinofeachof
themice.After60days,1x1065TGM1murineMMcellswereinjectedintothetailveinofthe
WTandCD84−/−mice,and3weekslater,miceweresacrificedandtheirBM,spleenandPB
wereisolated.
InvivoCD84inhibition
C57BL/KaLwRijmicewereinjectedtothetailveinwith1x1065TGM1murineMMcells.After
14days,themicewereseparatedintotwoorthreegroupsandadministeredeitherB4mAb
ortheIgG2aisotypecontrol(Biolegend)atdosesbetween30μgand200μgeveryotherday
intothetailvein,foratotalof5injections,or11injectionsforlongtermstudies.
VirusandcellularproductionofCRISPRlibrary
TheCRISPRmanipulationswereperformedusingamethodsimilarto(49).Thefollowing
sgRNA sequences were used: Control: GAACGUAGAAAUUCCCAUUU; CD84:
GAGUCAGAAUUGUUGCUGAC.
Chromium-51ReleaseAssay
MM.1S and Raji cells were labeled withChromium 51 (Cr-51) by incubating 1×106cells
in100µCi ofCr-51 for1.5hours at 37°C. The labeled cells werewashed 3 times and re-
suspendedin complete RPMI medium, and plated in 96-well round bottom plates in
triplicates.Theneffectorcellswereaddedat40∶1,20∶1and10∶1effector-to-targetratios
withB4andISO-1orIgG2aandDMSOcontrolsandincubatedat37°Cfor16hours.Cr-51
releasewasdetectedaspreviouslydescribed(50).
Suppressionassay
MDSCsuppressionassaywasperformedaspreviouslydescribed(51).
Statistics
AnalysisofdatawasperformedusingGraphPadPrism(Version8.0,GraphPadSoftware,Inc.,
LaJolla,CA,USA).Formostexperiments,themean ± standarderrorisprovided,andatleast
Lewinskyetal. 24
three experimentswereperformed. Formouse experiments, due todifferences in tumor
load,resultswerenormalized ineachexperiment to theaverageof thecontrolmice,and
resultsarethereforeshownasfoldchange;thisdidnotaffectthepercentageofimmunecells,
suchasMDSCs,ineachmouse,whichareshownasactualpercentages.
Totestforsignificance,eitherone-ortwo-sidedStudent’st-testwasuseddependingonthe
experiment,unlessstatedotherwise.Resultswereconsideredsignificantatapvalueof≤
0.05.
Studyapproval
AllanimalprocedureswereapprovedbytheAnimalResearchCommitteeattheWeizmann
InstituteofScience.
Primarypatient-derivedMMorhealthysamplescellswereprovidedincompliancewiththe
institutionalreviewboardsoftheparticipatinghospitals.
Acknowledgments
TheauthorswishtothankmembersoftheShacharlabforfruitfuldiscussionandTaliShalit
and the staff of the Nancy and Stephen Grand Israel National Center for Personalized
Medicine.WealsowishtothankDomenicoViolaforhishelpinthestudy.Thisresearchwas
supported by the Israel Cancer Research Foundation (ICRF) Judy and Bernie Briskin
Foundation,andYeda.I.S.istheincumbentoftheDr.MortonandAnnKleimanProfessorial
Chair.H.L.wassupportedbyKungligavetenskapsakademin’sfoundationGretaochRagnar
Müllersresestipendiefond.
Theauthorsdeclarenocompetinginterests
Authorcontributions
H.L.-designedresearch,performedexperiments,analyzeddataandwrotethepaper.
E.G.G.-designedresearch,performedexperiments,analyzeddataandwrotethepaper.
K.D.-designedresearch,performedexperiments,andanalyzeddata.
L.R.-designedresearch,performedexperiments,andanalyzeddata.
Lewinskyetal. 25
M.P.K.-designedresearchandanalyzeddata.
M.P.-performedexperiments.
B.P.-Performedexperiments.
J.C-designedresearch,andanalyzeddata.
T.-F.H.-designedresearchandanalyzeddata.
A.G.M.-designedresearchandanalyzeddata.
K.-Y.T.-designedresearchandanalyzeddata.
S.B.-designedresearchandanalyzeddata.
E.C.-performedexperimentsandanalyzeddata.
E.T.-performedexperiments
P.L.-designedresearchandanalyzeddata.
M.F.-designedresearchandanalyzeddata.
J.K.-Providedessentialreagent.
A.K.-Providedessentialreagent.
M.R.-Providedessentialreagent.
J.Y.-Providedessentialreagent.
M.A.C.-Providedessentialreagent.
O.S.-Providedessentialreagent.
Y.C.-Providedessentialreagent.
S.B-H.-designedresearchandanalyzeddata.
F.P.-designedresearchandanalyzeddata.
S.R.-designedresearch,analyzeddataandwrotethepaper.
I.S.-designedresearch,analyzeddataandwrotethepaper.
Lewinskyetal. 26
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A B
E
Figure 1
C D
10.6%
0-104 104
CD84
0
20
40
60
80
100
IsoAnti-CD84
20.5%
0 1040
20
40
60
80
100
IsoAnti-CD84
MMMGUS
F
CD14-
HD-PB CD14 + HD-PB
CD84
80.7%
HealthyCD14-
HealthyCD14+
MMCD14-
MMCD14+
0
20
40
60
80
100 *******
3.95%
CD14 -MM-PB CD14 + MM-PB
94.3%17.4%
23.5%
0 103
CD84
0
20
40
60
80
100
WT
5TGM1 inj
Stroma
Iso
HealthyCD14-
HealthyCD14+
MMCD14-
MMCD14+
0
10
20
40
60
80
100 ********
CD14- MM-BM
c3.95% 80.7% 7.7% 88.88%
CD14 -
HD-BMCD14 +
HD-BMCD14 -
MM-BM
CD14 +
MM-BM
CD84
CD84
Spleen
BM5TGM1
19.8%
102 103 104 1050
20
40
60
80
100
Healthy MM
CD84
%12.8% 26.0%
Healthypatient
Smolderingpatient
MMpatient
0
10
20
30*
***ns
Spleen BM0
5
10
15
20
25 *
WT 5TGM1 inj0
5
10
15
20
25 ***
HealthyCD138+CD38+
MGUSCD138+CD38+
SmolderingCD138+CD38+
MMCD138+CD38+
05
10152025303540455055 *
0.1449
Lewinskyetal. 31
Figure 1- CD84 is expressed on immunosuppressive cells in the MM
microenvironment
(A-D)CD84expressionwasanalyzedbyFACSon(A)MGUS,smolderingdisease,andpatient-
derivedCD138+CD38+MMcellsfromtheBM.Representativehistograms,withpercentages
ofthepositivelystainedcells,areshownontheright(n=3-10,p=0.44,one-wayANOVA).(B)
CD138+5TGM1cellstakenfromspleenandBMof5TGM1injectedC57BL/KaLwRijWTmice.
ArepresentativehistogramdemonstratingthepercentofCD84+BMandspleen5TGM1cells,
is shown on the right (n=7-8). (C) MM BM stroma cells from MM grown in culture.
Representativehistograms,showingthepercentofCD84positivecells,areshownonthe
right(n=3-6).(D)StromaderivedfromBMaspiratesof5TGM1injectedC57BL/KaLwRijWT
or non-injectedmice grown in culture. A representative histogram, with percentages of
CD84+stromacellsfrominjectedmiceisshownontheright(n=3-7).(E-F)CD14+cellsfrom
MM or healthy bone marrow aspirates (E), or MM or healthy peripheral blood (F).
Representativehistograms,indicatingpercentagesofpositivelystainedcells,areshownon
theright(n=7-16).
A
C
B
Healthy Smoldering MM0
20
40
60
80
100 *********
Healthy Smoldering MM0
10
20
30
40
50*
ns
**
99.3%
0 103 104
CD84
0
20
40
60
80
100 M-MDSC
HealthySmoldering
Iso
Myeloma
28.1%
0 103
CD84
0
20
40
60
80
100
HealthySmoldering
Iso
Myeloma
G-MDSC
tSNE 1
CD138+/CD38+
CD84+
CD14+/CD15-
M-MDSCs
CD15+/CD14-
G-MDSCs
Figure 2
Lewinskyetal. 32
Figure2-CD84isexpressedonMDSCsintheMMmicroenvironment
(A)HumanBM-derived(CD14+,CD11B+,CD15-,HLA-DR-)M-MDSCs.Arepresentativeplot,
showingpercentagesCD84postivieMMderivedM-MDSCs,isshownontheright(n=3-8).
(B) Human BM derived (CD15+, CD11B+, CD14-, HLA-DR-) G-MDSCs. A representative
histogram,andplotshowingpercentG-MDSCsexpressingCD84,isshownontheright(n=3-
8).(C)t-distributedstochasticneighborembedding(tSNE)plotsidentifyingCD14+cells,M-
MDSC,CD15+ cells,G-MDSCs,MMcells andCD84expression.Representative t-SNEplots
basedonCD14+,CD15+,M-MDSC,G-MDSC,MMandCD84+cellsfromtheMMpatientBM
samples(t-SNEwasrunwithperplexity=30,1000iterations,and800000livecellswere
randomlyselected).ThecellsarecoloredaccordingtotheexpressionlevelofCD14+/CD15-
for CD14; CD14+/CD15-/CD11b+/HLA-DR low/- for M-MDSC; CD15+/CD14- for CD15;
CD15+/CD14-/CD11b+/HLA-DRlow/-forG-MDSC;CD138+/CD38+forMMcells,andCD84
markers.
*p<0.05, **p<0.01, ***p<0.001, ****p<0.0001, with either unpaired T-test for pairwise
comparisonsorone-wayANOVAwithHolm-Sidakmultiplecorrectionstestforthreegroups.
A
E
Figure 3
IgG CD840.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5 *
IgG CD840.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0 *
IgG CD840.0
0.5
1.0
1.5
2.0 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
gG2a B40
10
20
30
40
50
60
70 *
IgG CD840.00.51.01.52.02.53.03.54.04.5 *
IgG CD840.0
0.5
1.0
1.5
2.0
2.5 *
siCTRL siCD840.00
0.25
0.50
0.75
1.00
1.25 *
siCTRL siCD840.00
0.25
0.50
0.75
1.00
1.25 *
B
C D F
47.3%
0 1040
20
40
60
80
100
PD-L1
MM
IgG
CD84
Iso
14.2%
0-103 103 1040
20
40
60
80
100
PD-L1
BM Stroma
IgG
CD84
Iso
29.0%
0-104 104 1050
20
40
60
80
100
PD-L1
5TGM1
IgG
CD84
Iso
IgG CD840.0
0.5
1.0
1.5
2.0
2.5 ***
G
IgG CD840
500
1000
1500
2000
2500 *
Lewinskyetal. 33
Figure3-CD84upregulatesPD-L1expressioninMMcellsandtheirmicroenvironment
(A)SortedprimaryMMcells(formRNAanalysis)ortotalprimaryBMstainedtoidentifyMM
cells (forproteinanalysis) frompatientswere stimulated with anti-CD84activating or
controlantibodies.PD-L1mRNA(leftgraph)orprotein(rightgraph)weredeterminedby
qRT-PCRorFACSanalysisrespectively.Arepresentativehistogram,withpercentofCD84
positivecells,isshown.(B)BonemarrowaspiratesfromprimaryMMpatientswereseeded
andgrownuntilaconfluentadherentlayerwasformed.Thereafter,CD84wasactivatedwith
anti-CD84orcontrolantibodies,andRNA(leftgraph)andprotein(rightgraph)expression
was analyzed using qPCR and flow cytometry, respectively. A representative histogram,
demonstratingthepercentofCD84positivecells,isshownontheright(n=3-5).(C)5TGM1
cellswereactivatedwithanti-CD84orcontrolantibodies.PD-L1messagewasanalyzedby
qRT-PCR (n=3). (D-E) 5TGM1 cells were incubated with antagonistic anti-CD84 B4 or
control antibodies. PD-L1mRNA (D) or protein (E)were analyzed by qRT-PCR or flow
cytometry,respectively.Representativehistogramsareshownontheright(n=3).
(F)5TGM1cellsweretreatedwitheithersiCTRLorsiCD84;RNAwaspurified,andanalyzed
byqPCRforCD84(leftgraph)andPD-L1(rightgraph)mRNAlevels(n=3).(G)PrimaryPB
CD14+cellsfromhealthydonorsweretreatedwithanti-CD84activatingantibodyorcontrol
antibodies.PD-L1mRNA(leftgraph)orprotein(rightgraph)levelswereanalyzedbyqRT-
PCRandflowcytometry,respectively(n=3-5).
24.6%
0-104 1040
20
40
60
80
100
PD-L1
M-MDSC
IgG
CD84
Iso
29.3%
0-104 1040
20
40
60
80
100
PD-L1
G-MDSC
IgG
CD84
Iso
IgG2a B40.0
0.5
1.0
1.5
2.0 *
IgG2a B4
0.0
0.5
1.0
1.5
2.0
2.5 *
IgG2a B40.00.51.01.52.02.53.03.54.04.55.05.56.06.5 *
IgG2a B40
1
2
3
4
5 *
+CD3+M - MDSCs+IgG
+CD 3 +M MDSCs+B4
+CD3 +G - MDSCs+IgG
+CD3 +G- MDSCs+B 4
Dividing18.4%
102 103 104 1050
20
40
60
80 IgG2a
B4
Unactivated
Dividing47.9%
102 103 104 1050
20
40
60
80
100
IgG2a
B4
Unactivated
IFNγ10.7%
IFNγ4.20%
CD84
p-mTOR
PD-L1
p-S6
p-AKT
β-Actin
THP1
CRISPRCRISPRNon-targetNon-target
CRISPRCD84
0
10
20
30 *
CRISPRNon-target
CRISPRCD84
0
10
20
30
40 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
D
E
C
F
G H
I J
Figure 4
100
IFNγ21.2%
IFNγ13.2%
IgG CD840
1
2
3
4
5
6
7*
A
IgG CD840.00.51.01.52.02.53.03.54.04.5
*B
Lewinskyetal. 34
Figure4-CD84upregulatesPD-L1expressioninMDSCs
(A-B)SortedprimaryM-MDSCs(CD14+,CD15-,CD11b+,HLA-DR-)(A),andG-MDSCs(CD15+,
CD14-,CD11b+,HLA-DR–)(B)frombonemarrowaspiratesofMMsampleswereanalyzedfor
PD-L1messagebyqRT-PCR.(C-F)Sorted(mRNA)orwholebonemarrow(protein)primary
M-MDSCs (LY6C+, LY6G-, CD11b+, CD11C-) (C, E), and G-MDSCs (LY6G+, LY6Clow, CD11b+,
CD11C-)(D,F),fromBMaspiratestakenfrom5TGM1injectedmicewereincubatedinthe
presenceofanti-CD84(B4)blockingorisotypecontrolantibodiesandanalyzedforPD-L1
mRNA (C-D) and protein (E-F) by qRT-PCR or FACS analysis, respectively (n=4).
RepresentativehistogramsareshowninLandM.(G-H)SortedM-(G)andG-MDSCs(H)were
treatedwithanti-CD84B4 inhibitoryor controlantibody, co-cultured for72hrswithWT
wholespleensataratioof1:4,andthepercentageofdividingCD8+TcellsandIFNγwas
analyzed thereafter (n=4-7, *p<0.05). (I) LentiCRISPR-v2 CRISPR/Cas9 system was
establishedintheTHP1celllinewithconstitutiveknockoutofCD84expression,andprotein
levelsofCD84andPD-L1weredeterminedbyflowcytometry(n=3).(J)THP1cellswere
activatedwithanti-CD84orcontrolantibodies,andCD84,p-mTOR,pAKT,pS6,andPD-L1
expressionlevelsweredeterminedbywesternblottinganalysis.
*p<0.05,**p<0.01,***p<0.001,witheitheroneortwotailedunpairedorpairedT-testfor
pairwisecomparisons.
A
D
B
C
J
E F G
H
I
K
Figure 5
19.6%
0-104 104
105
0
20
40
60
80
100
PD-L1
MM
IgG2a
B4
Iso
9.33%
0 104
PD-L1
0
20
40
60
80
100 M-MDSC
IgG2a
B4
0
1
2
3 * *Isotype Ctrl
CD14+/MM.1S/B4
CD14+/MM.1S
CD14+
PD-L1
CD3+
CD3+/CD14+/MM.1S
CD3+ /CD14+ /MM.1S/B4
PD-1
32.47% 52.68% 37.90%
0
20
40
60 * *
0
20
40
60
80
100 *
7AAD
Max Killing Min Killing
97.1% 8.7% 27.3% 36.6%
IgG B4
29.2%
0 103 104
PDL1
0
20
40
60
80
100G-MDSC
IgG2a
B4
4.17%
0 104
CTLA-4
0
20
40
60
80
100
14.9%
0-103 103
PD-1
0
20
40
60
80
100 CD8
IgG2a
B4
CD8
IgG2a
B4
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2 **
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4
1.6 **
0.00
0.25
0.50
0.75
1.00
1.25
CTLA4 LAG3 PD-1
***
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2 ***
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
0.00
0.25
0.50
0.75
1.00
1.25
CTLA4 PD-1
** ****
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2
1.21%
0 104 105
LAG-3
0
20
40
60
80
100
8.85%
0-103 103
PD-1
0
20
40
60
80
100
2.41%
0 104
CTLA-4
0
20
40
60
80
100CD4
IgG2a
B4
CD4
IgG2a
B4
CD4
IgG2a
B4
Annexin-V46.5%
live52.1%
0-103 103 104 1050
20
40
60
80
100
Annexin-V37.8%
live61.2%
0-103 103 104 1050
20
40
60
80
100MM MM
IgG B4
I
Lewinskyetal. 35
Figure5-BlockingCD84inducesTcell-mediatedkillingofhumanMMcells
(A-B)PBCD14+(A)orT(B)cellsfromahealthydonorwereculturedaloneorwithMM.1S
MMcelllinecellsataratioof1:2,inthepresenceorabsenceoftheanti-CD84-inhibitory(B4)
orcontrolantibodies.After48hrs,PD-L1(A),orPD-1(B)cellsurfacelevelsweredetermined
byflowcytometry(n=3).Representativeplotsareshownontheright.(C)PurifiedPBMCs
fromhealthydonorsweretreatedwithIgGorB4antibodies.After24hrs,thecellswereco-
culturedwithGFP+MM.1Sataratioof6:1for16hrs.Thepercentageof7AADstainingon
GFP+MM.1Scellswasdeterminedbyflowcytometry.Representativehistogramsareshown
ontheright(n=3).(D-I)PrimaryMMbonemarrowaspiratesweretreatedwithB4orIgG2a
antibodies.After48hrs,thepercentageofMMcells(Dleftgraph)andAnnexin-Vstaining(D
right graph) as well as PD-L1 expression (E) were determined by flow cytometry.
Representativehistograms,showingthepercentofofAnnexin-VpositivecellsorB4treated
cells,areshownontheright(n=4-6).(F-I)M-(F-G),andG-(H-I)MDSCswereincubatedwith
controlorB4antibodies.Percentageofcells(F,H),andPD-L1expression(G, I) following
treatmentweredeterminedbyFACS.Representativeplotsorhistogramsareshownonthe
right(n=4-5).(J-K)ThepercentageofCTLA-4,LAG-3andPD-1onCD4+(H)andCD8+(I)T
cells fromwholeMMbonemarrowaspiratestreatedwithB4orIgG2acontrolantibodies
wasanalyzedusingflowcytometry.Representativehistogramsareshownontheright(n=5-
7). *p<0.05, **p<0.01, ****p<0.0001, with unpaired or paired T-test for pairwise
comparisons.
Lewinskyetal. 36
Figure 6- CD84 expression is regulated in a MIF-dependent manner in the MM
microenvironment
(A-B) PB CD14+ cells derived from healthy volunteers were cultured alone or with the
humanmyelomacelllines(MM.1S,U266,KMS11)ataratioof1:2.After48hrs,theCD14+
cells were analyzed by flow cytometry for CD84 (A) and PD-L1 (B) expression (n=3).
Representativehistogramsareshownontheright.(C)MIFproteinexpressionwasanalyzed
inthehumanMMcelllinesNCI-H929,MM.1S,U266,RPMI-8226,L363,MM.1RandRajicell
line(positivecontrol)bywesternblotanalysis.(D-E)PBCD14+cellsfromhealthydonors
(D)orTHP1cells(E)wereculturedwithorwithout200ng/mlhrMIf.After48hrs,thecells
wereanalyzedforCD84andPD-L1expressionbyflowcytometry(n=3).(F-G)Bonemarrow
fromC57BL/KaLwRijWTmice(F)or5TGM1injectedC57BL/KaLwRijmice(G)wasgrown
untilanalmostconfluentadherentcell layerwasformed.Thereafter,100ng/mlMIFwas
added. After 48hrs, the cellswere harvested and analyzed by flow cytometry (excluding
CD45+andCD138+cells)forCD84expression.(n=3-5).(H-I)MM.1Scellsweretransfected
usingMIForcontrolsiRNA(10µM/mL).After48hrs,themediumwasreplacedwithfresh
culturemedium, and cells grown an additional 72hrs for collectionof supernatant.After
72hrs,thesupernatantsofthecellsweretransferredtoPBCD14+cellsderivedfromhealthy
donors.After48hrs, theCD14+cellswereharvestedandanalyzedby flowcytometry for
CD84(H),andPD-L1(I)expression(n=5).
Lewinskyetal. 37
Figure7-BlockingMIFreducesCD84expressionintheMMmicroenvironment
(A-B)PBCD14+cellsfromhealthydonorswereco-culturedwithMM.1Sataratioof1:2in
presenceorabsenceofMIFinhibitor(ISO-1).After48hrs,CD14+cellswereanalyzedfor
CD84 (A) and PD-L1 (B) expression by flow cytometry (n=3). (C) Purified PBMCs from
healthydonorsweretreatedwithorwithoutISO-1.After24h,thecellswereco-cultured
withGFP+MM.1Sataratioof6:1,andthepercentof7AADstainingonGFP+MM.1Scellswas
determined16hrs laterby flowcytometry.Representativehistogramsareshownon the
right (n=3).(D-E)WholeBMcultures frommicebearingMMwere treatedwith ISO-1or
control;CD84expressionwasdetermined48hrslateronM-MDSCs(D)orG-MDSCs(E)by
flowcytometry.Representativehistograms,withpercentagesdisplayingtheISO-1treated
cells,areshownontheright(n=3-4,*<0.05).*p<0.05,**p<0.01,****p<0.0001,withunpaired
orpairedT-testforpairwisecomparisons.
B
E
Figure 8
AA C D
ADAM8
ELF2
CSF3R
CARD19
CCL5
CCNDBP1
ID2 JUNB
CCDC15
PRDM1
CLLU1
SCARB2
CXCL16
AZI2
TCF4
NPC2
CYBA
S100A9
0
3
6
9
12
−2.5 0.0 2.5Foldchange (log2)
GenesDownnsUp
−log10(pvalue)
rRNA bindingzinc ion binding
transition metal ion bindingmRNA 5'−UTR binding
mRNA bindingubiquitin protein ligase binding
ubiquitin−like protein ligase bindingcadherin binding
actin bindingprotein kinase binding
alpha−mannosidase activitymannosidase activity
metal ion bindingN−acyltransferase activity
RAGE receptor bindingkinase binding
immunoglobulin bindingNADH dehydrogenase activity
0.0 0.5 1.0 1.5
CCDC15PRDM1
TCF4
AZI2
ELF2
CLLU1
CCNDBP1
CCL5
CSF3R
CARD19
SCARB2
CYBA
ADAM8
S100A9
JUNB
CXCL16
ID2
NPC2
−3
−2
−1
0
1
2
3
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 ***
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
F G
27.4%
0-104 104 105
S100A9
0
20
40
60
80
100M-MDSC
IgG2a
B4
47.3%
102 103 104 1050
20
40
60
80
100
CYBA
M-MDSC
IgG2a
B4
40.7%
0-104 104 105
S100A9
0
20
40
60
80
100M-MDSC
IgG2a
B4
52.5%
0 103 104
CYBA
0
20
40
60
80
100 M-MDSC
IgG2a
B4
Lewinskyetal. 38
Figure8-CD84regulatesfunctionalandimmunosuppressivepathwaysinhumanMM
M-MDSCs
(A-C)SortedBMM-MDSCs(CD14+,CD15-,HLA-DR-,CD11B+)wereactivatedwithanti-CD84
or IgG1k antibodies. After 24 hrs, RNAwas purified and sequenced usingMars-seq. (A)
VolcanoplotforM-MDSCgeneswithgreyindicatingnonDEgenes,andDEexpressedgenes
showneitherinblue,fordownregulated,orred,forupregulated,genes(DEgeneshadap
valueof<0.05afteradjustment,andabasemeanofmorethan5afteradjustmentwiththeR
package,fdrtool,n=4).(B)HighlightedgeneontologytermsfromtheupregulatedDEgenes
ofM-MDSCs(MolecularFunction,EnricheR).(C)Heatmapdepictinghighlightedgenesfrom
theDEgenes,witheachcolumnrepresentingthelog2CD84activatedtoIgGcontrolratio
valueofasinglepatient(n=4).(D-E)PurifiedprimaryMMBMsampleswereincubatedwith
B4orIgG2aantibodies.After48hrs,M-MDSCswereanalyzedforS100A9(D)(n=6)orCYBA
(E) protein expression (n=6). (F-G) Sorted primary M-MDSCs (message) or whole BM
cultures (protein) frommurine5TGM1 injectedmicewere incubatedwithB4 or control
antibodies.After24(mRNA,left)or48hrs(protein,right)cellswereanalyzedforS100A9
(F)andCYBA(G)expression.Representativehistogramsareshownontheright(n=3-4).
HIPK1
DOCK11
EMB
MT2A
CARHSP1
SASH1
HBB
ELANE
CST7
BDP1
ID2
HIF1A
BCL2A1
CMTM6
EP300
IFNGR1
LYST
0
1
2
3
4
−5.0 −2.5 0.0 2.5Foldchange (log2)
GenesDownnsUp
−log10(pvalue)
decreased metastatic potential
decreased macrophage cell number
altered tumor susceptibility
increased susceptibility to bacterial infection
increased susceptibility to parasitic infection
abnormal epicardium morphology
increased susceptibility to fungal infection
impaired macrophage phagocytosis
abnormal T−helper 1 physiology
0 1 2 3 4 5 6
abnormal neutrophil physiology CST7
HBB
BDP1
ELANE
CARHSP1
SASH1
HIF1A
BCL2A1
ID2
EP300
IFNGR1
HIPK1
DOCK11
MT2A
CMTM6
EMB
LYST
−2
−1
0
1
2
3
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
27.4%
0 102 103 104
BCL2A1
0
20
40
60
80
100G-MDSC
IgG2a
B4
Iso
BA C D
E
F G
H
IgG2a B4
0.00
0.25
0.50
0.75
1.00
1.25 *
37.1%
0-103 103 104 1050
50K
100K
150K
200K
250K
45.3%
0-103 103 104 1050
50K
100K
150K
200K
250K
0.84%
0-103 103 104 1050
50K
100K
150K
200K
250K
HIF1α
G-MDSCB4
G-MDSCIgG
G-MDSCIso
Figure 9
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
4.85%
0 104 105
CMTM6
0
20
40
60
80
100G-MDSC
IgG2a
B4
Iso
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 *
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
14.5%
0 104
BCL2A1
0
20
40
60
80
100G-MDSC
IgG2a
B4
Iso
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25 **
49.6 %
0 102
103
104
0
-103
103
104
105
39.0 %
0 102
103
104
0
-103
103
104
105
0 %
0 102 103 104
0
-103
103
104
105
CMTM-6
G-MDSCB4
G-MDSCIgG2a
G-MDSCIso
Lewinskyetal. 39
Figure9-CD84regulatesfunctionalandimmunosuppressivepathwaysinhumanMM
G-MDSCs
(A-C)SortedBMG-MDSCs(CD15+,CD14-,HLA-DR-,CD11B+)wereactivatedwithanti-CD84
or IgG1k antibodies. After 24 hrs RNAwas purified and sequenced using Mars-seq. (A)
VolcanoplotforG-MDSCgeneswithgreyindicatingnon-DEgenes,andDEexpressedgenes
showneitherinblue,fordownregulated,orinred,forupregulated,genes.(B)Highlighted
gene ontology terms from the upregulated DE genes of G-MDSCs (MGI Mammalian
Phenotype2017,EnricheR).(C)HeatmapdepictinghighlightedgenesfromtheDEgenes,
withlog2CD84activatedtoIgGcontrolratiovaluesshownforeachpatient(n=3).
(D-F)PrimaryMMbonemarrowaspiratesweretreatedwithB4orIgG2aantibodies.After
48hrs,G-MDSCswereanalyzed forCMTM6 (n=4) (D),BCL2A1 (n=5) (E), andHIF1α (F)
proteinlevels.Representativeplotsareshownonintheright.(G-H)Primarymurinesorted
G-MDSCs5TGM1injectedmicewereblockedwithB4orIgG2aantibodies.RNAwaspurified
after24hrs,andcellswereanalyzed forCMTM6(G)andBCL2A1(H)message(left)and
protein(right)expression.Representativehistogramsareshownontheright(n=3-4).
*p<0.05,**p<0.01,***p<0.001,withpairedT-testforpairwisecomparisons.
A
Figure 10
B
C D E F
HG
WT CD84 -/-0.00
0.25
0.50
0.75
1.00
1.25
1.50 *
WT CD84 -/-0.00
0.25
0.50
0.75
1.00
1.25
1.50
1.75 *
WTCD84 -/-0
4
8
12
16 ****
WT CD84 -/-0.00
0.25
0.50
0.75
1.00
1.25
1.50 *
WT CD84 -/-0.00
0.25
0.50
0.75
1.00
1.25
1.50
1.75 **
WTCD84 -/-0.00
0.25
0.50
0.75
1.00
1.25
1.50 *
WT CD84 -/-0.0
0.4
0.8
1.2
1.6 **
WTCD84 -/-0.00
0.25
0.50
0.75
1.00
1.25 *
4.27%
0 104 105
0
-103
103
104
10514.1%
0 104 105
CD19
0
-103
103
104
105
CD13
8
WT chimera CD84 -/- chimera
G-MDSC
M-MDSC
0-103 103 104 105
0
-103
103
104
105
G-MDSC
M-MDSC
0-103 103 104 105
Ly6G
0
-103
103
104
105
Ly6C
12.3 %
9.38 % 4.29 %
4.29 %
WT chimera CD84 -/- chimera
41.9%
0 104 1050
20
40
60
80
100
PD-L1
MM
WTCD84 -/-
Iso
27.0%
0 104 1050
20
40
60
80
100
PD-L1
M-MDSC
WT CD84 -/-
Iso
0
20
40
60
80
100
** *** *******
0 7 14 210
20
40
60
80
100%
M-M
DSC
in P
B
*** ns **
****
0
20
40
60
80
100
** ns *****
0
20
40
60
80
100
** **** *****
G-M
DSC
in P
B%
% C
D84
on
G-M
DSC
in P
B
% C
D84
on
M-M
DSC
in P
B
Days0 7 14 21
Days0 7 14 21
Days0 7 14 21
Days
Lewinskyetal. 40
Figure10-M-MDSCexpansionandsuppressioninvivoisdependentonCD84
(A-B) 5TGM1 cellswere I.V. injected into syngeneic immune-competent C57BL/KaLwRij
mice.PBsampleswerecollectedandanalyzedafter1week,2weeks,and3weeksbyweekly
submandibularbleedingaftertheinjection.ThepercentagesofM-MDSCs,G-MDSCs(A)and
CD84 expression onM-MDSCs andG-MDSCs (B)were analyzed by flow cytometry (n=5,
**p<0.01,***p<0.001,****p<0.0001).(C-H)WTorCD84-/-micewereirradiatedwith1050
Radandinjectedwith1x106C57BL/KaLwRijBMcellsafter1day.After60days,themice
wereinjectedwith1x1065TGM1cells.Afteranadditional21days,themiceweresacrificed,
andtheirbonemarrow,bloodandspleensanalyzed.(C-D)PercentofMMcellsinthebone
marrow(C),andspleen(D).(E)IgG2bantibodiesintheblood.(F)PD-L1proteinlevelson
thesurfaceofMMfrombonemarrow(Leftgraph)andspleen(Rightgraph).Representative
histogramoftheBMisshown(n=9-14,*p<0.05,**p<0.01).(G)PercentofM-MDSCsinthe
bonemarrow.Representativedotplotsshownontheright(n=14,****p<0.0001).(H)PD-L1
on the surface of M-MDSCs from bone marrow (left graph) and spleen (right graph).
Representativehistogram,ofBMisshowninthemiddle(n=6-10,*p<0.05).
WT CD84-/-0
4
8
12
16
20 ***
0.00.40.81.21.62.02.42.83.23.6
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
* * * * *
WT CD84-/-0.00
0.25
0.50
0.75
1.00
1.25
1.50 *
0.0
0.5
1.0
1.5
2.0
2.5 ***
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
****** ** **
0.0
0.4
0.8
1.2
1.6
2.0
2.4
2.8
3.2
IL- 2 IFNγ GRZMB LAMP- 1
* ** *** **
29.4%
0 104 1050
20
40
60
80
100
PD-L1
G-MDSCWT CD84-/-
Iso
13.3%
0 103 1040
20
40
60
80
100
4.56%
0 103 1050
20
40
60
80
100
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
CD8+
WT CD84-/-
Iso Iso CD8+
WT CD84-/-
4.05%
0 103 1040
20
40
60
80
100
3.76%
0-103 103 104 1050
20
40
60
80
100
9.43%
3 3 4 50
20
40
60
80
100CD8+
WT CD84-/-
CD8+
WT CD84-/-
CD8+
WTCD84-/-
Iso Iso Iso Iso
13.4%
0 104
IFNγ
0
50K
100K
150K
200K
250K
8.35%
0 104
IFNγ
0
50K
100K
150K
200K
250K
18.4%
0 104
GRZMB
0
50K
100K
150K
200K
250K
31.3%
0 104
GRZMB
0
50K
100K
150K
200K
250K
WT chimera CD84-/- chimera WT chimera CD84-/- chimeraCD8+ CD8+ CD8+ CD8+
1.46%
0-103 103 104 1050
50K
100K
150K
200K
250K
GRZMB
Unactivated
1.20%
0-103 103 104 1050
50K
100K
150K
200K
250K
IFNγ
Unactivated
Figure 11
A B C
D
E
Lewinskyetal. 41
Figure11-G-MDSCexpansionandsuppressioninvivoisdependentonCD84
(A-E) WT or CD84-/- mice were irradiated with 1050 Rad and injected with 1x106
C57BL/KaLwRij BM cells after 1 day. After 60 days, themice were injected with 1x106
5TGM1cells.Afteranadditional21days,themiceweresacrificed,andtheirbonemarrow,
bloodandspleensanalyzed.(A)PercentofBMG-MDSCs(n=12-13,***p<0.001).(B)PD-L1
expressiononthesurfaceofBMG-MDSCs.Representativehistogram,isshownontheright
(n=7-10,*p<0.05).(C-E)Bonemarrow(C)andspleen(D)-derivedTcellswereanalyzedfor
PD-1, LAG-3, CTLA-4, 2B4 and KLRG-1. Representative histograms, with percentages
displaying the CD84-/- cells, are shown on the right (M; n=13-17, *p<0.05) (N; n=11-15,
**p<0.01,***p<0.001).(E)SplenicTcellswereactivatedfor24hrsusinganti-CD3antibody.
Brefeldin-Awasaddedtothecultureforthelast2hrs.Representativedotplotsareshown
ontheright(n=13-17,*p<0.05,**p<0.01,***p<0.001).
A
0 80
20
40
60
80
100
28 30 32 34 36 38
*
Days
WT
CD84 -/-
WT CD84-/-0.00
0.25
0.50
0.75
1.00
1.25
1.50 ****
BMM
8.69%
0-103
103
104
0
-103
103
104
105MM
23.2%
0-103
103
104
CD19
0
-103
103
104
105
WT CD84-/-
C
CD84-/-WTWT CD84-/-0.0
2.5
5.0
7.5
10.0
12.5
15.0 **D
G-MDSC
M-MDSC
0 104 105
Ly6G
0
-103
103
104
105
G-MDSC
M-MDSC
0 104 105
0
-103
103
104
105
26.4 %
12.6 %
23.2 %
5.28 %
WT CD84-/-
WT CD84-/-0
10
20
30
40
50
60
70
80 *E
54.2%
102 103 104 1050
20
40
60
80
100
PD-L1
M-MDSC
WTCD84-/-
Iso
WT CD84-/-0102030405060708090
100 *F
27.8%
0 104 1050
20
40
60
80
100
S100A9
M-MDSC
WTCD84-/-
FMO
WT CD84-/-0
10
20
30
40
50
60
70 ***
G
19.7%
0 104 105
CYBA
0
20
40
60
80
100 M-MDSCWTCD84-/-
Figure 12
Lewinskyetal. 42
Figure12-LossofCD84reducesM-MDSCexpansionandMMtumorload.
CD84-/-micebackcrossedtoC57BL/KaLwRijfor6-7generationsandC57BL/KaLwRijmice
wereinjectedwith5TGM1cells.After28daysforallexperimentsexceptthesurvivalstudy,
themicewere sacrificed and their bonemarrow, blood and spleenswere analyzed. (A)
Survival curve (n=8-9, *p<0.05, Log-rank test). (B) Percentage of MM cells in the bone
marrow(n=9-10,****p<0.0001).Representativedotplotsareshown.(C)Spleensderived
fromtheWTandCD84-/-mice.(D)PercentageofBMM-MDSCs.Representativedotplotsare
shownontheright,(n=5-6,**p<0.01).(E-G)PD-L1(E),S100A9(F),andCYBA(G)protein
levelsweredeterminedinbonemarrowM-MDSCsbyFACS.Representativehistograms,are
shownontheright(n=5-11,*p<0.05,**p<0.01,***p<0.001).
Figure 13
WT CD84-/-0
10
20
30
40 ns
A
WT CD84-/-0102030405060708090 ****
B
41.8%
102 103 104 1050
20
40
60
80
100
PD-L1
G-MDSC
WTCD84-/-
Iso
WT CD84-/-0102030405060708090 *
C
22.2%
103 104 105
BCL2A1
0
20
40
60
80
100G-MDSC
WTCD84-/-
Iso
WT CD84-/-0
10
20
30
40
50
60
70 *D
19.8%
0 103 104 105
CMTM6
0
20
40
60
80
100G-MDSC
WTCD84-/-
Iso
0.00
0.25
0.50
0.75
1.00
1.25
1.50
1.75
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
* * ***E
0
1
2
3
4
5
6
7
GRZMB IFNγ Lamp-1 IL-2
** * * *
FWTCD84-/- 26.6%
0 102 103 104
50K
100K
150K
25.1%
0 102 103
50K
100K
150K
9.29%
0 102 103
50K
100K
150K
9.73%
0 102 103 104
50K
100K
150KWTCD8+
GRZMB
CD84-/-
CD8+
GRZMB
WTCD8+
IFNγ
CD84-/-
CD8+
IFNγ
CD8+
IFNγ 3.72%
0 102 103
50K
100K
150KUnactivated
0%
2 3 4
50K
100K
150KUnactivatedCD8+
GRZMB
G
9.81%
0-103 103 104 1050
50K
100K
150K
200K
250K
20.6%
0-103 103 104 1050
50K
100K
150K
200K
250K
0%
0-103 103 104 1050
50K
100K
150K
200K
250KWTCD8+
LAMP-1
CD84-/-
CD8+
LAMP-1
UnactivatedCD8+
LAMP-1
0
1
2
3
4
GRZMB IFNγ Lamp-1 IL-2
* * * *
WTCD84-/-
Lewinskyetal. 43
Figure13-LossofCD84reducesG-MDSCexpansionandTcellsuppression.
CD84-/-micebackcrossedtoC57BL/KaLwRijfor6-7generationsandC57BL/KaLwRijmice
were injectedwith 5TGM1 cells. After 28 days, themicewere sacrificed and their bone
marrow,bloodandspleenswereanalyzed.(A)PercentageofBMG-MDSCs.(B-D)PD-L1(B),
BCL2A1(C),CMTM6(D)proteinlevelsweredeterminedonbonemarrowG-MDSCsbyFACS.
Representative histograms, are shown on the right (n=4-11, *p<0.05, ****p<0.0001). (E)
Bonemarrow-derivedTcellsanalyzedforPD-1,LAG-3,CTLA-4,2B4andKLRG-1cellsurface
levelsbyFACS(n=6-9,*p<0.05).(F-G)Splenic(M)orBM(N)Tcellswereactivatedfor24
hrswithanti-CD3inthepresenceoftheBrefeldin-Aduringthelast2hours.GRZMB,IFNγ,
LAMP-1andIL-2proteinlevelswereanalyzedbyFACS.RepresentativedotplotsofGRZMB
andIFNγareshown(n=4-11,*p<0.05,**p<0.01).
IgG2a B40.000.250.500.751.001.251.501.752.002.25 **
IgG2a B40.00
0.25
0.50
0.75
1.00
1.25
1.50 **
0 5 26 28 30 32 34 360
102030405060708090
100
Days
B4IgG2a*
0 5 26 28 30 32 340
102030405060708090
100
Days
B4IgG2a**
IgG2a B40.0
2.5
5.0
7.5
10.0 **
IgG2a B405
10152025303540455055
%P
D-L
1on
M-M
DS
Cin
BM
**
24.2%
0 103 104 1050
20
40
60
80
100 IgG2aB4
PDL-1B4
0
10
20
30
40
50
60
70 **
%P
D-L
1on
G-M
DS
Cin
BM
47.5%
0 103 104 1050
20
40
60
80
100 IgG2aB4
PDL-1
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
GRZMB IFNg
**** *** *
Lamp-1 IL-2
*
IFNg20.3%
0 103 1040
50K
100K
150K
200K
250K
GRZMB12.0%
0-103 1030
50K
100K
150K
200K
250K
IFNg9.17%
0 103 1040
50K
100K
150K
200K
250K
30μg IgG2a
GRZMB28.7%
0-103 1030
50K
100K
150K
200K
250K30μg B4
Granzyme B
INFγ
SS
C
CD8+ CD8+
CD8+ CD8+
0.00
0.25
0.50
0.75
1.00
1.25
1.50
1.75
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
***** ***
0.00
0.25
0.50
0.75
1.00
1.25
1.50
PD-1 LAG-3 CTLA-4 2B4 KLRG-1
* **** * *
%B
MC
D3+
+ T
cel
ls
(X-f
old
of Ig
G2a
)
A
Figure 14
D E F
G H
I J K
B C
IgG2aB4
IgG2aB4
GRZMB0.42%
0-103 1030
50K
100K
150K
200K
250K CD8
IFNg0.62%
0 103 1040
50K
100K
150K
200K
250K CD8
G-MDSC
M-MDSC
0 104 105
0-10
310
3
104
105
G-MDSC
M-MDSC
0 104 105
Ly6G
0-10
310
3
104
105
9.86%
28.6%
6.22%
27.1%
30 μg B430 μg IgG
MM22.0%
0-103 103 104
CD19
0
103
104
105 MM
11.0%
0-103 103 104
0
103
104
10530 μg B430 μg IgG
IgG2a B40.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4 *
IgG2aB4
+
+
Lewinskyetal. 44
Figure14-B4hasatherapeuticeffectonMMinjectedmice.
(A-K)C57BL/KaLwRijmicewereinjectedwith1x1065TGM1cells.After2weeks,themice
weredividedintotwogroupsandtreatedwith30µgB4anti-CD84blockingantibody,or
IgG2acontrol.(A-C)Percentof5TGM1cellsinthebonemarrow(A),andspleen(B)andfold
ofchanceinserumIgG2b(C),followingfivetreatmentswithB4.Representativedotplotsare
shownontheright (n=9-12). (D-E)Survivalcurve(D)andpercentofparalyzedmice(E)
(n=10-11). (F-G) Percent of BMM-MDSCs (F) and PD-L1 expressed on their surface (G)
followingfiveinjections.Representativedotplotisshownontheright(n=12;9).(H)Percent
of PD-L1 on G-MDSCs in the bone marrow following five injections. Representative
histogram,areshownintheright(n=7).(I-J)Bonemarrow(I),andspleen(J)-derivedTcells
wereanalyzedforPD-1,LAG-3,CTLA-4,2B4andKLRG-1byFACS(n=9-13).(K)SplenicT
cellswereactivatedfor24hrswithanti-CD3togetherwithBrefeldin-Aduringthelast2hrs.
GRZMB,IFNγ,LAMP-1andIL-2proteinlevelswereanalyzedbyFACSwithrepresentative
dotplots(n=7-12).
Lewinskyetal. 45
Figure15-B4reducestumorload,MDSCsandTcellsuppressioninadosedependent
manner.
(A-H)C57BL/KaLwRijmicewereinjectedwith1x1065TGM1cells.After2weeks,themice
weredividedintothreegroupsandtreatedwithfiveinjectionsof90or200μgofB4,or200
μg IgG2a. (A) Percentage of 5TGM1 cells in the bonemarrow following five treatments.
Representativedotplotshownontheright(n=4-7).(B)PercentofPD-L1on5TGM1cellsin
thebonemarrowfollowingfivetreatments,(n=4-6).(C)PercentofM-MDSCs inthebone
marrowfollowingfiveinjections.Representativedotplotsareshown(n=4-6).(D)Percent
ofG-MDSCsinthebonemarrowfollowingfiveinjections.Representativedotplotshownin
(C)(n=4-6).(E-F)Arginase-1stainingonBMM-MDSCs(E),andG-MDSCs(F)followingfive
injectionsof200μgB4or200μgIgG2a(n=5-7,**p<0.01).(G)iNOSstainingonBMM-MDSCs
followingfiveinjectionsof200μgB4or200μgIgG2a(n=5-7,**p<0.01).(H)Bonemarrow-
derived T cells analyzed for PD-1, LAG-3, CTLA-4, 2B4 and KLRG-1. Representative
histogramsareshownontheright (n=4-8). *p<0.05,**p<0.01,***p<0.001,****p<0.0001,
withunpairedT-testforpairwisecomparisons,one-wayANOVAwithHolm-Sidakmultiple
correctionstestforthreegroups.