babs1201 - notes

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BABS1201 - Notes Cell Structure Most abundant elements in universe are carbon, hydrogen, helium and oxygen Major elements of life are C, H, O, N, P, S These are in uniform amounts relative across organisms Life is diverse 1.8 million species identified 10 million species estimated (on Earth) 4 Characteristics of life: reproduce, grow & develop, respond to environment, metabolise to use and generate energy Cell: the smallest unit of organisation that can perform all the activities essential for life (simplest group of matter that is considered a living entity) Classification Scientists classified life into species and broader classifications Initially done by examining structures, functions and other obvious features Currently, nucleic acid comparisons are used eg. 16s rRNA gene for bacteria Each species has a two-part name (Genus species) RNA is used to classify the 3 domains Prokaryotes: Bacteria (d), Archaea (d) Eukaryotes (d): Animal (k), Plant (k), Fungi (k), Protists (k) Prokaryotes vs. Eukaryotes Prokaryote Eukarote Dierences Size of bacteria is 1-5 μm Size of eukaryotic cells is 10-100 μm No membrane-bound organelles Membrane-bound organelles, including a nucleus Similarity Plasma membrane is a selectively permeable barrier that surrounds the jelly-like cytosol inside the cell Ribosomes are the protein factories of the cell. They are macromolecules made of ribosomal RNA and protein (therefore not considered organelles) 1

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Page 1: BABS1201 - Notes

BABS1201 - Notes Cell Structure • Most abundant elements in universe are carbon, hydrogen, helium and oxygen

• Major elements of life are C, H, O, N, P, S

• These are in uniform amounts relative across organisms

• Life is diverse

• 1.8 million species identified

• 10 million species estimated (on Earth)

• 4 Characteristics of life: reproduce, grow & develop, respond to environment, metabolise to use and generate energy

• Cell: the smallest unit of organisation that can perform all the activities essential for life (simplest group of matter that is considered a living entity)

Classification

• Scientists classified life into species and broader classifications

• Initially done by examining structures, functions and other obvious features

• Currently, nucleic acid comparisons are used eg. 16s rRNA gene for bacteria

• Each species has a two-part name (Genus species)

• RNA is used to classify the 3 domains

• Prokaryotes: Bacteria (d), Archaea (d)

• Eukaryotes (d): Animal (k), Plant (k), Fungi (k), Protists (k)

Prokaryotes vs. Eukaryotes

Prokaryote Eukarote

DifferencesSize of bacteria is 1-5 µm Size of eukaryotic cells is 10-100 µm

No membrane-bound organelles Membrane-bound organelles, including a nucleus

Similarity

Plasma membrane is a selectively permeable barrier that surrounds the jelly-like cytosol inside the cell

Ribosomes are the protein factories of the cell. They are macromolecules made of ribosomal RNA and protein (therefore not considered organelles)

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Page 2: BABS1201 - Notes

Explaining Origin of Eukaryotes - Endosymbiotic theory

• Ancestors of eukaryotes engulfed O2 with non-photosynthetic prokaryotic cells

• This process is called endocytosis (uptake by invagination of membrane)

• Symbiosis occurred (mutual benefit) → merged into a single organism over long period of time

✦ Evidence suggests chloroplasts developed from endocytosis of cyanobacteria (photosynthetic bacteria)

✦ Also, other evidence include the double membrane of the organelles as well as the similarity of the 16s rRNA to the one found in bacteria

Macromolecules

• Theses are large chain-like molecules called polymers (made of similar/identical monomers linked by covalent bonds)

• Synthesis and Breakdown are both catalysed by enzymes:

• Synthesis: dehydration to form new covalent bond

• Breakdown: hydrolysis to split a covalent bond

• E.g. digestion

Carbohydrates

• Monosaccharides

• There is diversity in:

• Location of carbonyl group which determines whether the sugar is aldose (eg. Glucose) or ketose (eg. Fructose)

• Spatial arrangements around the asymmetric carbons (eg. Glucose vs. galactose)

Macromolecule Monomer

Carbohydrate Monosaccharide

Lipid Fatty acid

Protein Amino acid

Nucleic acid Nucleotide

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Page 3: BABS1201 - Notes

• Disaccharides are two monosaccharides joined by a glycosidic bond eg. maltose

• Polysaccharides are 100s to 1000s of monos joined by glycosidic bonds eg. starch

Lipids

• Lipids are hydrophobic (non-polar) macromolecules

Storage Structural

STARCH (polymer of glucose):• Stored by plants as granules within various

cellular structures.• This stored energy can be later accessed

by hydrolysis

CELLULOSE (polymer of glucose):• Major component of plant cell walls

GLYCOGEN (highly branched polymer of glucose):• Stored by animals mainly in liver and muscle

cells. • Hydrolysis of glycogen releases glucose when

the demand for energy increases (but it cannot sustain an animal for a long time)

CHITIN (polymer of glucose with N groups):• Found in exoskeletons of arthropods (insects,

spiders, crustaceans etc.)

Form Function

Energy Transport and Storage Fats (Triacylglycerol or TAG)

Structure Phospholipid, sterols

Chemical Messengers Steroids (eg. cholesterol), glycolipids

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