an investigation of the interactions between zinc-deficient and copper, zinc superoxide dismutase...

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An Investigation of the An Investigation of the Interactions Between Zinc- Interactions Between Zinc- deficient and Copper, Zinc deficient and Copper, Zinc Superoxide Dismutase Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

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Page 1: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

An Investigation of the Interactions An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Between Zinc-deficient and Copper, Zinc Superoxide DismutaseSuperoxide Dismutase

Katie Meyers

Dr. Joe Beckman

Department of Biochemistry/Biophysics

Page 2: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Amyotrophic Lateral SclerosisAmyotrophic Lateral Sclerosis Fatal neurodegenerative disease that is

characterized by selective motor neuron death Majority of ALS cases are sporadic but

approximately 10% of all cases are familial Of these familial cases, 20% of individuals inherit

dominant autosomal mutations in the SOD1 gene SOD1 gene codes for copper, zinc superoxide

dismutase (SOD)

Page 3: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Superoxide Dismutase (SOD)Superoxide Dismutase (SOD)

Small: 153 amino acid protein

Exists as a dimer of identical subunits, containing one copper and one zinc atom per monomer

SOD functions as a superoxide scavenger in cells throughout the body

Page 4: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

SOD FunctionSOD Function

Page 5: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

SOD MutationsSOD Mutations Over 100 different ALS causing mutations

have been discovered dispersed throughout the gene

The toxicity of these mutations is not due to reduced superoxide scavenging ability

Something about these mutations causes them to become toxic to cells

Page 6: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

SOD ChemistrySOD Chemistry Mutant SODs have a reduced affinity for binding

zinc, leaving the copper more reactive In Cu, Zn(-) SODs, copper can react with

ascorbate and facilitate the transfer of electrons from ascorbate to oxygen, producing superoxide

Superoxide reacts with nitric oxide to form peroxynitrite, which can nitrate tyrosine residues and is harmful to motor neurons

Page 7: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

aa

Oxygen

Peroxynitrite(ONOO-)

(1 e-)Reduced by

Ascorbate orThiols

Cu2+

OxidizedSOD

Cu -Superoxide(Cu -O2

.-)2+

2+

Cu1+

ReducedSOD

(Cu O2)1+...

Cu2+

NO.

e-

ReoxidizingSOD

e-

Page 8: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Zinc DeficiencyZinc Deficiency

Wild-type Cu, Zn

Protects motor neurons

Motor neuron death

Mutant Cu, Zn

Mutant Cu, Zn(-)

Protects motor neurons

Rapid motor neuron death

Page 9: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

ObjectiveObjective Why does Cu, Zn SOD make Cu, Zn(-) SOD more

toxic to motor neurons in vitro?

Cu, Zn homodimer31,808 Da

Cu, Zn(-) homodimer 31,732 Da

Cu, Zn + Cu, Zn(-) heterodimer 31,780 Da

Can subunits exchange between dimers?Can subunits exchange between dimers?

Page 10: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

SOD dimers do exchange their subunits and form heterodimers

The exchange is rapid with a half life of 15-20 minutes

0 10 20 30 40 50 60 90 120 12hrs

Time, min

QuickTime™ and aTIFF (LZW) decompressor

are needed to see this picture.

Page 11: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Why would heterodimers be toxic?Why would heterodimers be toxic?

Cu, Zn(-) SOD may be able to transfer an electron to Cu, Zn SOD increasing the rate of reduction and resulting in tyrosine nitration

The presence of Cu, Zn SOD could slow down the aggregation of Cu, Zn(-) SOD, a protective mechanism, resulting in increased cell damage

Page 12: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Does the Presence of Cu, Zn(-) SOD Increase Does the Presence of Cu, Zn(-) SOD Increase the Rate of Reduction of Cu, Zn SOD?the Rate of Reduction of Cu, Zn SOD?

Cu, Zn and Cu, Zn(-) SODs were individually reduced by ascorbate and analyzed using a stopped flow spectrophotometer

An equimolar mixture of Cu, Zn and Cu, Zn(-) SOD was reduced by ascorbate and rates of reduction were measured as a function of time

Page 13: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

0.014

0.016

0.018

0.02

0.022

0.024

0.026

0.028

0 10 20 30 40 50

ab

s 6

80

nm

y = m1 + m2 * e^(-m3*M0)

ErrorValue

4.0846e-050.016099m1

0.000204940.01027m2

0.00748660.2333m3

NA6.4622e-05Chisq

NA0.97079R

Cu, Zn + Cu, Zn(-)

0

0.005

0.01

0.015

0.02

0.025

0.03

0.035

0.04

0 2 4 6 8 10

ab

s 6

80

nm

y = m1 + m2 * e (̂-m3*M0)

ErrorValue

3.6495e-050.0065316m1

0.000220970.02868m2

0.018931.5796m3

NA0.00058678Chisq

NA0.98646R

Cu, Zn(-)

0.002

0.004

0.006

0.008

0.01

0.012

0.014

0 20 40 60 80 100 120 140

abs

68

0nm

y = m1 + m2 * e (̂-m3*M0)

ErrorValue

3.0205e-050.0044145m1

8.1802e-050.0062662m2

0.001120.042882m3

NA0.00018687Chisq

NA0.95168R

Cu, Zn

Page 14: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Rates of ReductionRates of Reduction

0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

2

time

rate

, abs

/sec

Cu, Zn

Cu, Zn + Cu, Zn(-)

Cu, Zn(-)

Page 15: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

Does Cu, Zn SOD Affect the Does Cu, Zn SOD Affect the Aggregation of Cu, Zn(-) SOD?Aggregation of Cu, Zn(-) SOD?

Cu, Zn(-) aggregates as a mechanism to protect motor neurons from apoptosis

Analytical ultracentrifugation was used to measure aggregation as a function of absorbance

When Cu, Zn(-) is mixed with Cu, Zn SOD, aggregation is severely reduced

Interactions increase the toxicity of Cu, Zn SOD

40

8 9

05

10152025303540

% A

gg

reg

atio

n

Cu,Zn(-) Cu,Zn(-) +Cu,Zn

Cu,Zn

Analytical Ultracentrifugation

Page 16: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

ConclusionsConclusions

Cu, Zn and Cu, Zn(-) SODs exchange monomers with a half life of 15-20 minutes

The presence of Cu, Zn(-) SOD may cause the Cu, Zn rate of reduction to increase, but further data collection and analysis are necessary

Cu, Zn SOD interferes with the aggregation of Cu, Zn(-) SOD, preventing this protective mechanism and increasing the toxicity of Cu, Zn(-) SOD

Page 17: An Investigation of the Interactions Between Zinc-deficient and Copper, Zinc Superoxide Dismutase Katie Meyers Dr. Joe Beckman Department of Biochemistry/Biophysics

AcknowledgementsAcknowledgements

Dr. Joe Beckman Howard Hughes Medical Institute Linus Pauling Institute Keith Nylin, Blaine Roberts, Val Bomben,

Kristine Robinson Kevin Ahern