supplementary figure 1. flowchart of patients included in the training set

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273 fresh frozen tissue samples. 74excluded 47with highly degraded RNA 16with low concentration of RNA 5with good quality RNA, but no microarray performed, 6without RNA extracted. 199 microarray analysis performed. 8excluded 4with microarray of inferior quality - PowerPoint PPT Presentation

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Supplementary Figure 1. Flowchart of patients included in the training set.

273fresh frozen

tissue samples

199microarray analysis

performed

74 excluded47 with highly degraded RNA16 with low concentration of RNA

5 with good quality RNA, but nomicroarray performed,

6 without RNA extracted

8 excluded4 with microarray of inferior

quality4 with good quality array, but

with < 5% invasive carcinomain frozen sample

191successful microarray analysis from verified

tumor tissue (FFT)

191training set

FFT

146available from formalin-

fixed, paraffin-embedded (FFPE)

45 excluded 33 with no corresponding

paraffin blocks available4 with < 5% invasive carcinoma8 with insufficient RNA yield

146training set

FFPE

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