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ORIGINAL PAPER
Screening of marine actinomycetes isolated from the Bayof Bengal, India for antimicrobial activity and industrial enzymes
Subramani Ramesh Æ Narayanasamy Mathivanan
Received: 27 March 2009 / Accepted: 2 July 2009 / Published online: 16 July 2009
� Springer Science+Business Media B.V. 2009
Abstract A total of 288 marine samples were collected
from different locations of the Bay of Bengal starting from
Pulicat lake to Kanyakumari, and 208 isolates of marine
actinomycetes were isolated using starch casein agar
medium. The growth pattern, mycelial coloration, pro-
duction of exopolysaccharides and diffusible pigment and
abundance of Streptomyces spp. were documented. Among
marine actinomycetes, Streptomyces spp. were present in
large proportion (88%). Among 208 marine actinomycetes,
111 isolates exhibited antimicrobial activity against human
pathogens, and 151 showed antifungal activity against two
plant pathogens. Among 208 isolates, 183, 157, 116, 72
and 68 isolates produced lipase, caseinase, gelatinase,
cellulase and amylase, respectively. The results of diver-
sity, antimicrobial activity and enzymes production have
increased the scope of finding industrially important mar-
ine actinomycetes from the Bay of Bengal and these
organisms could be vital sources for the discovery of
industrially useful molecules/enzymes.
Keywords Bay of Bengal � Actinomycetes � Diversity �Antimicrobial activity � Extracellular enzymes
Introduction
Marine microorganisms are increasingly becoming an
important source in the search for industrially important
molecules. Today both academic and industrial interest in
marine microorganisms are on the rise, because unique and
biologically active metabolites have been reported from
marine organisms (Jensen and William 1994; Imada 2004;
Zhang et al. 2005). Actinomycetes are present in various
ecological habitats such as soil, fresh water, back water,
lake, compost, sewage and marine environment (Goodfel-
low and Williams 1983). They are considered highly
valuable as they produce various antibiotics and other
therapeutically useful compounds with diverse biological
activities. The vast majority of these metabolites (70%)
have been isolated from actinomycetes with the remaining
20% from fungi, 7% from Bacillus and 1–2% from Pseu-
domonas. Hence, it is known that the actinomycetes are
perhaps the most important group of organisms studied
extensively for the discovery of drugs and other bioactive
metabolites programme (Lange and Lopez 1996; Prabav-
athy et al. 2006).
Marine environment contains a wide range of distinct
microorganisms that are not present in the terrestrial
environment. Though some reports are available on anti-
biotic and enzyme production by marine actinomycetes,
the marine environment is still a potential source for new
actinomycetes, which can yield novel bioactive compounds
and industrially important enzymes (Sharma and Pant
2001). Since late 1980s, the number of novel compounds
isolated from terrestrial microorganisms has steadily
decreased. To cope up with the demand for new pharma-
ceutical compounds and to combat the antibiotic resistant
pathogens, researchers have been forced to look for novel
microorganisms in unusual environment. Relatively, the
Bay of Bengal, an arm of the Indian Ocean has rarely been
explored for microbial diversity and microbial metabolites.
Hence, there is an immense possibility to identify new
marine actinomycetes in the Bay of Bengal to discover
novel bioactive compounds. Accordingly, the present study
S. Ramesh � N. Mathivanan (&)
Biocontrol and Microbial Metabolites Lab, Centre for Advanced
Studies in Botany, University of Madras, Guindy Campus,
Chennai, Tamil Nadu 600025, India
e-mail: [email protected]
123
World J Microbiol Biotechnol (2009) 25:2103–2111
DOI 10.1007/s11274-009-0113-4
was aimed to investigate the diversity of industrially
important marine actinomycetes in the Bay of Bengal with
the ultimate objective of discovering novel bioactive
compounds.
Materials and methods
Study area
The study area covered the Bay of Bengal coast of Tamil
Nadu starting from Pulicat lagoon in the north to Kan-
yakumari in the south. This vast area has a variety of niches
such as Pulicat lake, Ennore creek, Chennai harbour and
several estuaries viz., Coovum, Adyar, Palar, Vellar, etc.
Pulicat lake is the second largest brackish water lagoon in
India which runs parallel to the Bay of Bengal. It is located
at 60 km north-east of Chennai and is separated from the
Bay of Bengal by Sriharikota island in Andhra Pradesh
state. The lake is about 360 km2 in size and its depth (water
column) varies from 1 to 6 m. To our knowledge, there is
no report from this lake for microbial diversity. Pichavaram
mangrove is located along the coast of Bay of Bengal with
11�220 N to 11�300 N wide and 79�450 E to 79�520 E long.
The total area of this mangrove is about 1,470 ha con-
sisting of about 50 small islands.
Collection of samples
A total of 80 seashore sediments, 43 seawater samples, 6
marine animals and 5 marine algal samples were collected
from different locations in Tamil Nadu coast of the Bay of
Bengal. Totally 21 mangrove sediments, 6 mangrove rhi-
zosphere sediments and 10 water samples were collected
from Pichavaram and Ennore mangroves in Tamil Nadu.
At least half a kilometer of distance was maintained
between the sampling stations. The sediment samples were
collected at 2–3 m depth using grab sampler. Forty-one
sediments and two brackish water samples were collected
from Pulicat lake, Tamil Nadu at 5–7 m depth by grab
sampler. In addition, 26 deep sea sediment samples, 4 corer
sediments and 39 deep seawater samples were collected
from the Bay of Bengal. The deep sea marine samples were
collected during the cruise programme organized by the
National Institute of Ocean Technology (NIOT), Chennai,
India. A total of four sediments and one water samples
were collected from the estuary of Adayar river and Marina
beach, Chennai, Tamil Nadu. The sediments and water
samples were collected in sterile polypropylene bags and
screw cap bottles, respectively. The collected samples were
brought to the laboratory for isolation of marine actino-
mycetes and the location, nature of sample and pH were
documented.
Measurement of pH
The pH of water samples was measured directly. Ten
grams of each marine sediment sample was suspended in
20 ml of distilled water. It was allowed to stand for 20 min
with intermittent stirring to reach equilibrium. After being
left to settle, the pH was measured.
Isolation of marine actinomycetes
All the marine sediment and seawater samples were sub-
jected to pre-heat treatment prior to serial dilution. Pre-heat
treatment was performed by incubating the seawater and
sediment samples in a water bath at 50�C for 60 min
(Takizawa et al. 1993). Ten grams of sediment samples
were suspended in 95 ml of sterile aged seawater and these
suspensions were considered as 10-1 dilution. Ten milli-
litre of seawater sample was suspended in 90 ml of sterile
aged seawater and these suspensions were considered as
10-1 dilution. Starch casein agar (SCA) medium contained
soluble starch 10 g, vitamin free casein 0.3 g, KNO3 2 g,
NaCl 2 g, K2HPO4 2 g, MgSO4. 7H2O 0.05 g, CaCO3
0.02 g, FeSO4�7H2O 0.01 g, agar 20 g, natural aged sea-
water 1,000 ml, pH 7.0 ± 0.2 was used for isolation of
marine actinomycetes. Serial dilutions were done and
overlaid on the surface of SCA. The medium also con-
tained cycloheximide at 50 lg/ml to minimize fungal
contamination. All the plates were incubated at room
temperature (28 ± 2�C) for 21 days.
The appearance and growth of marine actinomycetes
were observed everyday on SCA plates and the colonies
were recognized by their characteristic chalky to leathery
appearance. Further, they were observed using a light
microscope for their filamentous nature, spores, width of
hyphae and spiral sporophores. Individual colonies were
picked up, and subcultured on SCA and International
Streptomyces Project medium 2 (ISP2) to ascertain their
purity. Various colony characteristics such as size, shape,
mycelial colour, exopolysaccharide (EPS) and diffusible
pigment production were recorded. The pure cultures of
marine actinomycetes were sub-cultured in SCA slants;
incubated at room temperature for 5–7 days to achieve
good sporulation; and then preserved in 20% glycerol vials
at -80�C (Williams and Cross 1971).
Identification of actinomycetes
The cover slip culture technique (Williams and Wilkins
1994) was used to study the morphological characteristics
such as substrate and aerial mycelia, spores in chain and
chain with coil formation, formation of rectiflexibiles, re-
tinaculipetri and spiral spores for all the isolates. In addi-
tion, nature of Gram’s staining, motility and cell wall
2104 World J Microbiol Biotechnol (2009) 25:2103–2111
123
amino acid analysis (Becker et al. 1964) were also deter-
mined to identify the marine actinomycetes isolates up to
genus level.
Growth characteristics of marine actinomycetes
All the isolates of marine actinomycetes were grown on
SCA at room temperature and the growth rate was moni-
tored every day up to 21 days. The isolates, which showed
good growth in 4 days were considered as fast growers and
those that showed good growth between 4 and 7 days were
classified as moderate growers and the slow growers took
more than 7 days for their growth. In addition to growth,
mycelial colour was monitored in all the isolates of marine
actinomycetes and documented.
Screening of marine actinomycetes for antimicrobial
activity
All the 208 marine actinomycete isolates were screened for
antibacterial and antifungal activity by cross streak and
dual culture, respectively. In cross streak method, the
marine isolates were streaked on modified nutrient agar
(NA) (50% NA ? 50% SCA) as a straight line in the left
side corner of the Petriplate and were incubated at room
temperature for 5 days. After incubation, the test human
bacterial pathogens (Staphylococcus epidermidis
MTCC3615, Bacillus subtilis MTCC441, Pseudomonas
aeruginosa MTCC1688, Escherichia coli MTCC1687 and
Candida albicans MTCC227) were streaked at right angle
to the original streak of the actinomycetes isolates. The
zone of inhibition (ZOI) against human bacterial pathogens
was measured after 48 h of incubation. Plates with the
same medium without inoculation of actinomycetes but
with simultaneous streaking of test organisms were main-
tained for controls.
Four marine actinomycete isolates were streaked on
modified potato dextrose agar (PDA) (50% PDA ? 50%
SCA) as straight lines in four corners of the Petriplate and
incubated at room temperature for 5 days. After incuba-
tion, a fresh mycelial disc of fungal phytopathogens (Rhi-
zoctonia solani and Alternaria alternata) was placed in the
center of each Petriplate and the ZOI against phytopatho-
gens was measured after 5 days of incubation. The myce-
lial discs of the test phytopathogens were also kept in
control plates where no actinomycetes were inoculated.
Screening of marine actinomycetes for extracellular
enzymes production
All the isolated marine actinomycetes were screened
qualitatively for the production of five important enzymes
such as lipase, caseinase, gelatinase, cellulase and amylase.
Each actinomycete strain was streaked on the four corners
of the respective substrates such as starch, carboxyl methyl
cellulose, gelatin, casein and tween 20 amended agar plates
separately and was incubated for 5 days at room temper-
ature. Then the plate was flooded with relevant indicator
solution and the development of clear zone around the
growth of organism was considered positive for enzyme
activity.
Results and discussion
Actinomycetes constantly hold a special significance in the
research arena for the past 60 years as the members of this
group, especially streptomycetes, are known to produce a
vast array of compounds with diverse biological properties.
The discovery of new bioactive compounds is a never
ending process to meet the everlasting demand for novel
drug and other biomolecules with antimicrobial and ther-
apeutic properties in order to combat human and plant
pathogens and also to treat other human ailments. In this
scenario, it is more important to identify newer or rare
actinomycetes because they are the pivotal sources of
potent molecules. Marine environment is the biggest res-
ervoir of chemical and biological diversity. Therefore,
research focus on marine environment has been gaining
importance in recent years. However, still it has not been
fully explored and there is tremendous potential to identify
novel organisms with various biological properties. In line
with this view, the present research has been initiated to
identify novel actinomycetes from Indian marine environ-
ment, because its rich microbial diversity has been studied
only to a limited extent. Totally 288 different marine
samples were collected from various locations of the Bay
of Bengal, India (Fig. 1). Among them, a total of 98 acti-
nomycetes were isolated from marine sediments, five from
seawater and nine from marine animals (star fishes, mol-
lusks and sea urchins), but no actinomycetes were isolated
from marine algae. From Pulicat lake samples, 30 actino-
mycetes were isolated from sediments and 13 from
brackish water. From mangrove, 15 actinomycetes were
isolated from sediments, 7 from mangrove rhizospheres
and none of the strains were isolated from mangrove water.
In addition, 18 actinomycete strains were isolated from
deep sea sediments and one strain was isolated from deep
seawater and corer sediments, respectively. A total of
seven actinomycetes were isolated from estuary sediments
and four from estuary water samples (Table 1). Although
soils are considered excellent sources for the isolation of
actinomycetes with diverse potential (Ouhdouch et al.
2001; Lee and Hwang 2002; Prabavathy 2005; Malarvizhi
2006), several actinomycetes have been isolated from
marine samples (Sujatha et al. 2005; Maldonado et al.
World J Microbiol Biotechnol (2009) 25:2103–2111 2105
123
2005; Fenical and Jensen 2006; Ramesh et al. 2006, 2009).
The isolation of actinomycetes from marine sediments was
well documented, yet the proportion of these filamentous
bacteria which represents the indigenous marine microflora
remains unclear. This question persists, in part, because
there is little published information describing the distri-
bution, growth and ecological role of actinomycetes in
marine habitats. As actinomycetes represent a small com-
ponent of the total bacterial population in marine sediments
(Goodfellow and Williams 1983), their role in the marine
environment is difficult to assess. Nevertheless, these
marine actinomycetes are considered economically
important as often they are reported to produce valuable
bioactive molecules and industrially important enzymes
(Jensen et al. 2005b; Ramesh et al. 2009).
In this study, 208 different actinomycetes were isolated
from 288 marine samples using SCA selective medium
prepared in aged seawater. It has already been reported that
the aged seawater amended media were used to isolate and
maintain the marine microorganisms. Although, a number
of selective media (Kuster and Williams 1964; Hayakawa
and Nonomura 1987; Crawford et al. 1993; Duangmal et al.
2005; Jensen et al. 2005a) were developed for isolation of
actinomycetes, SCA was selected, because in this medium
the development of bacterial and fungal colony was very
much suppressed, allowing only the actinomycetes to grow.
Distribution of actinomycetes is influenced by the pH of
the respective environment. In the present study, among the
208 marine actinomycetes, 99 isolates were isolated in the
pH between 8.1 and 8.5, which was followed by the pH
range of 7.6–8.0 from which 92 isolates were obtained.
However, only eight marine actinomycetes were isolated
from the pH range of 7.0–7.5 (Table 2). This is in agree-
ment with the findings of Taber (1960) who demonstrated
that most actinomycetes prefer neutral or slightly alkaline
soils for their growth. Similar to the present results,
Fig. 1 Sampling locations in the Bay of Bengal, India
Table 1 Details of the isolation of marine actinomycetes from the
Bay of Bengal, India
Location Nature of sample No. of
sample
No. of
actinomycetes
isolate(s)
Coastal Sediments 80 98
Seawater 43 5
Macro algae 5 0
Animals 6 9
Deep sea Sediments 26 18
Seawater 39 1
Corer sediments 4 1
Mangrove Rhizosphere sediments 6 7
Sediments 21 15
Water 10 0
Estuary Sediments 4 7
Water 1 4
Brackish lake Sediments 41 30
Brackish water 2 13
Total 288 208
2106 World J Microbiol Biotechnol (2009) 25:2103–2111
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Malarvizhi (2006) obtained 33% of the actinomycetes from
soils with pH between 7.6 and 8.5. In contrast, Lee and
Hwang (2002) isolated many streptomycetes even from
acidic soil with pH less than 5.0. They also reported the
distribution of other actinomycetes genera such as Micro-
monospora, Dactylosporangium, Streptosporangium, Acti-
nomadura and Nocardioformis in soils at pH 4.0–5.0.
Further, they observed that Streptomyces were predominant
in soils with a pH range of 5.1–6.5.
All the isolated marine actinomycetes were screened for
growth rate on SCA. Surprisingly, among 208 isolates, 151
isolates (72.59%) showed fast growth, 47 (22.59%)
exhibited slow growth and the remaining of 10 isolates
(4.8%) showed moderate growth (Fig. 2). The results
clearly revealed that all the marine actinomycetes are not
slow growing microorganisms and most of their growth is
comparable with filamentous fungi.
Among 208 isolates, 115, 79, 6, 7 and 1 were grey,
white, blue, pink and orange pigmented, respectively.
Interestingly, grey and white mycelial pigmented marine
actinomycetes were prominent in the Bay of Bengal. Fur-
ther, out of 208 isolates, 6 produced diffusible pigment on
SCA agar and 58 isolates produced EPS (Fig. 3). These
pigments and EPS production could be protective mecha-
nisms for actinomycetes to survive in the hostile marine
environment. Ramesh et al. (2006) isolated many EPS
producing and pigmented actinomycetes in the post-Tsu-
nami periods from the Bay of Bengal and most of them
were able to survive for a long period in marine environ-
ment compared to non-pigmented and non-EPS producing
actinomycetes. The adaptation of marine microorganisms
to the diverse marine habitats provides seemingly limitless
evolutionary opportunities for the production of unique
secondary metabolites.
The colonies of actinomycetes were elevated, convex
and powdery in nature. Many of such morphological
characteristics are common in most of the streptomycetes
(Anderson and Wellington 2001; Lo et al. 2002; Fguira
et al. 2005; Sujatha et al. 2005). Most of the marine
Table 2 Potential of marine
actinomycetes isolated from
different pH on antimicrobial
activity and extracellular
enzyme production
pH range Total
isolates
No. of isolates with antimicrobial activity No. of isolates with
extracellular enzymesAgainst human pathogens Against plant pathogens
7.0–7.5 8 3 6 8
7.6–8.0 92 52 76 88
8.1–8.5 99 50 88 96
Total 199 105 170 192
0
50
100
150
200
250
Total isolates Fast Moderate Slow
Growth rate
Num
ber
of is
olat
es
Fig. 2 Growth rate of marine actinomycetes isolated from the Bay of
Bengal
208
1115
6
79
758 6
Total isolates Orange Grey Blue
White Pink EPS Diffusible pigment
Fig. 3 Mycelial colouration of
marine actinomycetes isolated
from the Bay of Bengal
World J Microbiol Biotechnol (2009) 25:2103–2111 2107
123
actinomycetes exhibited different mycelial colourations.
The spore morphology is considered as one of the impor-
tant characteristics in the identification of Streptomyces and
it greatly varies among the species (Tresner et al. 1961). It
has been found that the majority of the marine isolates
produced aerial coiled mycelia and the spores arranged in
chains as already reported by Mukherjee and Sen (2004)
and Roes and Meyer (2005). Further, results of the tests as
outlined in the Bergey’s Manual of Determinative Bacte-
riology (Williams et al. 1989) and the Laboratory Manual
for Identification of Actinomycetes (IMTECH 1998)
showed that among the 208 actinomycetes isolated from
the Bay of Bengal, 183 isolates were identified as Strep-
tomyces spp. and the remaining 25 isolates belonged to
other genera. Remarkably, majority of the marine actino-
mycetes (87.98%) were Streptomyces spp. (Fig. 4). The
cell wall composition is an important criterion for the
identification of Streptomyces (Sujatha et al. 2005) and
chemotaxonomic investigation using isomeric diamino-
pimelic acid (DAP) configuration was already established
(Becker et al. 1964; Lechevalier and Lechevalier 1970). It
has been reported that the streptomycetes are common
inhabitants of marine environments (Kokare et al. 2004a, b;
Fiedler et al. 2005; Ramesh et al. 2006), though other
actinomycetes are also present (Jensen et al. 1991; Mincer
et al. 2002; Magarvey et al. 2004; Maldonado et al. 2008).
The degree of antimicrobial activity varied greatly
among the actinomycetes as shown in Figs. 5 and 6.
Among 208 isolates, 111 isolates (53%) showed high
antimicrobial activity against human pathogens (Fig. 5). Of
which, 31, 18, 52, 81, 28 isolates exhibited antimicrobial
activity against E. coli, P. aeruginosa, S. epidermidis, B.
subtilis and C. albicans, respectively. On the other hand,
four isolates showed antimicrobial activity against all of
the five pathogens, but 97 isolates did not show antimi-
crobial activity. Several researchers have already reported
similar antimicrobial activity of actinomycetes against
various human pathogens. Saadoun and Gharaibeh (2003)
obtained 90 different Streptomyces isolates, of which, 54%
exhibited remarkable antibacterial activity against B. sub-
tilis, S. aureus, E. coli, Klebsiella sp. and Shigella sp.
Deshmukh and Sridhar (2002) isolated several actinomy-
cetes from freshwater coastal stream, of which, four iso-
lates inhibited B. subtilis and E. coli. In addition, Imada
et al. (2007) isolated 100 actinomycete strains from various
locations of the Otsuchi Bay and found that 59 strains
produced antibacterial activity.
In the present study it was recorded that 151 isolates
(72%) showed antifungal activity against plant pathogens.
107 and 98 isolates exhibited antifungal activity against
R. solani and A. alternata, respectively. On the other hand,
54 isolates showed antifungal activity against both the
fungal phytopathogens, but 57 isolates did not exhibit
antifungal activity (Fig. 6). Similarly, Yuan and Crawford
208183
25
Total isolates Streptomycetes Others
Fig. 4 Abundance of streptomycetes in the Bay of Bengal
208
1113118
52
81
284
97
Total isolates Total antimicrobial activity E. coli P. aeruginosaS. epidermidis B. subtilisC. albicans Activity against five pathogens No activity
Fig. 5 Antimicrobial activity of
marine actinomycetes against
human pathogens
2108 World J Microbiol Biotechnol (2009) 25:2103–2111
123
(1995) demonstrated in vitro antagonism of Streptomyces
lydicus against various fungal phytopathogens in plate
assay. Further, they observed the inhibition of mycelial
growth in Pythium ultimum and R. solani when grown in
liquid medium with S. lydicus. Kathiresan et al. (2005)
have isolated 160 actinomycetes from various mangrove
environments in India and demonstrated their antifungal
activity against plant pathogenic fungi. Zaitlin et al. (2004)
demonstrated the antagonistic activity of Streptomyces
halstedi and Streptomyces rochei against many phyto-
pathogenic fungi. Search for novel secondary metabolites
with diverse biological activity in assorted environment has
gained greater attention in recent years.
Among 99 marine actinomycetes isolated from the pH
between 8.1 and 8.5, 50 (50.5%) and 88 (88.9%) isolates
exhibited antimicrobial activity against human and plant
pathogens, respectively. Among 92 isolates from the pH
between 7.6 and 8.0, 52 (56.5%) and 76 (82.6%) marine
actinomycetes exhibited antimicrobial activity against
human and plant pathogens, respectively. Among eight
isolates from the pH range 7–7.5, 3 (37.5%) and 8 (100%)
marine actinomycetes showed antimicrobial activity
against human and plant pathogens, respectively (Table 2).
With the growing awareness on environmental protec-
tion, the use of enzymes, particularly from extremophiles,
gained considerable attention in many industrial processes.
In recent years, the microbial enzymes have been replacing
chemical catalysts in manufacturing chemicals, textiles,
pharmaceuticals, paper, food and agricultural chemicals.
Enzyme-based industrial bioprocess now directly competes
with established chemical-based process within the pro-
cessed foods, pharmaceutical and allied fermentation
industries. In the case of terrestrial actinomycetes, many
researchers reported the production of various industrial
enzymes (Mohamedin 1999; Azeredo et al. 2001; Pandhare
et al. 2002; Stamford et al. 2002; Goshev et al. 2005;
Sharma et al. 2005). But to date, it has been concluded that
there are not many reports on the extracellular enzymes
from the marine actinomycetes. However, in this study,
among the 208 isolates, 183, 157, 116, 72, 68 isolates
produced lipase, caseinase, gelatinase, cellulase and amy-
lase, respectively (Fig. 7). Interestingly, 22 isolates pro-
duced all the five enzymes. The majority of actinomycete
strains isolated from the Bay of Bengal produced lipase
followed by caseinase, gelatinase, cellulase and amylase.
Similarly, Leon et al. (2007) isolated many actinomycetes
from marine sediments of the central coast of Peru with
multi-enzyme activity. Notably, a strain among 208 iso-
lates, identified as Streptomyces fungicidicus MML1614,
was able to produce a thermostable alkaline protease
(Ramesh et al. 2009). These results indicated the potential
of marine actinomycetes from the Bay of Bengal for the
208
151107
98
5457
Total isolates Total antifungal activity
R. solani A. alternata
Activity against two pathogens No activity
Fig. 6 Antifungal activity of marine actinomycetes against
phytopathogens
208
183
157
116
68
72 22
Total isolates Lipase Caseinase Gelatinase
Amylase Cellulase Five enzymes
Fig. 7 Extracellular enzymes
production in marine
actinomycetes
World J Microbiol Biotechnol (2009) 25:2103–2111 2109
123
production of various industrial enzymes. Importantly,
majority of the actinomycetes (87.98%) obtained from the
Bay of Bengal produced lipase. The population of lipase
producing actinomycetes is relatively large in marine
environment, because the ocean contains significant
amounts of polymers. Microbes have to produce lipase
enzyme to degrade the polymers in order to adapt in the
extreme environment.
Among the 99 isolates obtained from the pH between
8.1 and 8.5, 96 (97%) marine actinomycetes exhibited
extracellular enzyme production, which is of significance.
Among 92 isolates from the pH between 7.6 and 8.0, 88
(95.7%) showed extracellular enzyme production. How-
ever, all of the eight isolates (100%) obtained from the pH
range of 7–7.5 produced extracellular enzyme (Table 2).
Conclusion
Marine actinomycetes are metabolically active more vig-
orously in the marine environment, which leads to the
production of various enzymes and bioactive compounds
compared to terrestrial strains. Therefore, it is important to
understand the marine-derived actinomycetes in ecological
terms and also as a resource for biotechnology. Our present
study and other reports from our lab (Ramesh 2009; Ra-
mesh et al. 2009) evidently revealed that the Bay of Bengal
is a potential source for a wide spectrum of antimicrobial
and industrial enzyme producing actinomycetes. Moreover,
it can be an imperative resource for bioprospecting novel/
rare Streptomyces spp., which could yield valuable bioac-
tive molecules.
Acknowledgments We thank the Director, CAS in Botany, Uni-
versity of Madras and the Director, National Institute of Ocean
Technology, Chennai for laboratory facilities and organizing the
Cruise programmes, respectively.
References
Anderson AS, Wellington EMH (2001) The taxonomy of Streptomy-ces and related genera. Int J Syst Evol Microbiol 51:797–814
Azeredo LAI, Leite SGF, Freire DMG, Benchetrit LC, Coelho RRR
(2001) Proteases from actinomycetes interfere in solid media
plate assays of hyaluronidase activity. J Microbiol Methods
45:207–212
Becker B, Lechevalier MP, Gordon RE, Lechevalier HA (1964)
Rapid differentiation between Nocardia and Streptomyces by
paper chromatography of whole cell hydrolysate. Appl Micro-
biol 12:421–424
Crawford DI, Lynch JM, Whipps JM, Ousley MA (1993) Isolation
and characterization of actinomycetes antagonistic to a fungal
root pathogen. Appl Environ Microbiol 59:3899–3909
Deshmukh MB, Sridhar KR (2002) Distribution and antimicrobial
activity of actinomycetes of a fresh water coastal stream. Asian J
Microbiol Biotech Environ Sci 4:335–340
Duangmal K, Ward CA, Goodfellow M (2005) Selective isolation of
members of the Streptomyces violaceoruber clad from soil.
Microbiol Lett 245:321–327
Fenical W, Jensen PR (2006) Developing a new resource for drug
discovery: marine actinomycete bacteria. Nat Chem Biol 2:
666–673
Fguira L, Fotso S, Ben Ameur-Mehdi R, Mellouli L, Laatsch H
(2005) Purification and structure elucidation of antifungal and
antibacterial activities of newly isolated Streptomyces sp. strain
US80. Res Microbiol 156:341–347
Fiedler HP, Bruntner C, Bull AT, Ward AC, Goodfellow M, Potterat
O, Puder C, Mihm G (2005) Marine actinomycetes as a source of
novel secondary metabolites. Antonie Van Leeuwenhoek 87:
37–42
Goodfellow M, Williams ST (1983) Ecology of actinomycetes. Annu
Rev Microbiol 37:189–216
Goshev I, Gousterova A, Vasileva-Tonkova E, Nedkov P (2005)
Characterization of the enzyme complexed produced by two
newly isolated thermophilic actinomycete strains during growth
on collagen rich materials. Process Biochem 40:1627–1631
Hayakawa M, Nonomura H (1987) Humic acid vitamin agar, a new
medium for the selective isolation of soil actinomycetes.
J Ferment Technol 65:501–509
Imada C (2004) Enzyme inhibitors and other bioactive compounds
from marine actinomycetes. Antonie von Leewenhoek 87:
59–63
Imada C, Koseki N, Kamata M, Kobayashi T, Hamada-Sato N (2007)
Isolation and characterization of antibacterial substances pro-
duced by marine actinomycetes in the presence of seawater.
Actinomycetologica 21:27–31
IMTECH (1998) Laboratory manual for identification of actinomy-
cetes. Institute of Microbial Technology, Chandigarh, p 94
Jensen P, William F (1994) Strategies for the discovery of secondary
metabolites from marine bacteria. Ecological perspectives. Annu
Rev Microbiol 48:559–584
Jensen P, Dwight R, Fenical W (1991) The distribution of actinomy-
cetes in near-shore tropical marine sediments. Appl Environ
Microbiol 57:1102–1108
Jensen PR, Gontang E, Mafnas C, Mincer TJ, Fenical W (2005a)
Culturable marine actinomycetes diversity from tropical Pacific
ocean sediments. Environ Microbiol 7:1039–1048
Jensen PR, Mincer TJ, Williams PG, Fenical W (2005b) Marine
actinomycete diversity and natural product discovery. Antonie
Van Leeuwenhoek 87:43–48
Kathiresan K, Balagurunathan R, Masilamani Selvam M (2005)
Fungicidal activity of marine actinomycetes against phytopath-
ogenic fungi. Indian J Biotechnol 4:271–276
Kokare CR, Mahadik KR, Kadam SS, Chopade BA (2004a) Isolation,
characterization and antimicrobial activity of marine halophilic
Actinopolyspora species AH1 from the west coast of India. Curr
Sci 86:593–597
Kokare CR, Mahadik KR, Kadam SS, Chopade BA (2004b) Isolation
of bioactive marine actinomycetes from sediments isolated from
Goa and Maharashtra coastlines (west coast of India). Indian J
Mar Sci 33:248–256
Kuster E, Williams S (1964) Selection of media for the isolation of
Streptomyces. Nature 202:928–929
Lange L, Lopez CS (1996) Microorganisms as a source of biolog-
ically active secondary metabolites. In: Copping LG (ed) Crop
protection agents from nature: natural products, analogues. The
royal society of chemistry, Cambridge
Lechevalier HA, Lechevalier MP (1970) A critical evaluation of the
genera of aerobic actinomycetes. In: Prauser H (ed) The
actinomycetes. Gustav F Ischer-Verlag, Jena, pp 393–405
Lee JY, Hwang BK (2002) Diversity of antifungal actinomycetes in
various vegetative soils of Korea. Can J Microbiol 48:407–417
2110 World J Microbiol Biotechnol (2009) 25:2103–2111
123
Leon J, Liza L, Soto I, Cuadra D, Patino L, Zerpa R (2007) Bioactives
actinomycetes of marine sediment from the central coast of Peru.
Revi Peru Boil 14:259–270
Lo CW, Lai NS, Cheah HY, Wong NKI, Ho CC (2002) Asian review
of biodiversity and environmental conservation. http://www.
arbc.com.my/pdf/art21julysep02.pdf
Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH
(2004) Isolation and characterization of novel marine-derived
actinomycete taxa rich in bioactive metabolites. Appl Environ
Microbiol 70:7520–7529
Malarvizhi K (2006) Biodiversity and antagonistic potential of soil
actinomycetes from south India: isolation, purification and
characterization of antimicrobial metabolites produced by
Streptomyces sp. MML1042. Ph.D. Thesis, University of
Madras, Chennai, India
Maldonado LA, Fenical W, Jensen PR, Kauffman CA, Mincer TJ,
Wrad AC, Bull AT, Goodfellow M (2005) Salinispora arenicolagen. nov., and Salinispora tropica nov., obligate marine
actinomycetes belonging to the family Micromonosporaceae.
Int J Syst Evol Microbiol 55:1759–1766
Maldonado LA, Fragoso-Yanez D, Perez-Garcıa A, Rosellon-Druker
J, Quintana ET (2008) Actinobacterial diversity from marine
sediments collected in Mexico. Antonie van Leeuwenhoek
95:111–120. doi: 10.1007/s10482-008-9294-34
Mincer TJ, Jensen PR, Kauffman CA, Fenical W (2002) Wide spread
and persistent populations of a major new marine actinomycete
taxon in ocean sediments. Appl Environ Microbiol 68:5005–
5011
Mohamedin AH (1999) Isolation and identification and some cultural
conditions of a protease producing thermophilic Streptomycesstrain grown on chicken feather as a substrate. Int J Biodeter
Biodeg 43:13–21
Mukherjee G, Sen SK (2004) Characterization and identification of
chitinase producing Streptomyces venezulae P10. Indian J Exp
Biol 42:541–544
Ouhdouch Y, Barakate M, Finanse C (2001) Actinomycetes of
Moroccan habitats: isolation and screening for antifungal
activities. Eur J Soil Biol 37:69–74
Pandhare J, Zog K, Deshpande VV (2002) Differential stabilities of
alkaline protease inhibitors from actinomycetes: effect of various
additives on thermostability. Bioresour Technol 84:165–169
Prabavathy VR (2005) Isolation, purification and characterization of
antimicrobial metabolites produced by Streptomyces sp. and
evolution against blast and sheath diseases of rice. Ph.D Thesis,
University of Madras, India
Prabavathy VR, Mathivanan N, Murugesan K (2006) Control of blast
and sheath blight diseases of rice using antifungal metabolites
produced by Streptomyces sp. PM5. Biol Control 39:313–319
Ramesh S (2009) Marine actinomycetes diversity in Bay of Bengal,
India: Isolation and characterization of bioactive compounds
from Streptomyces fungicidicus MML1614. Ph. D. thesis,
University of Madras, Chennai, India
Ramesh S, Jayaprakashvel M, Mathivanan N (2006) Microbial status
in seawater and coastal sediments during pre- and post-tsunami
periods in the Bay of Bengal, India. Mar Ecol 27:198–203
Ramesh S, Rajesh M, Mathivanan N (2009) Characterization of a
thermostable alkaline protease produced by marine Streptomycesfungicidicus MML1614. Bioprocess Biosyst Eng. doi: 10.1007/
s00449-009-0305-1
Roes LM, Meyer PR (2005) Streptomyces pharetrae sp. nov., isolated
from soil from the semi-arid Karoo region. Syst Appl Microbiol
28:488–493
Saadoun I, Gharaibeh R (2003) The Streptomyces flora of Badia
region of Jordan and its potential as a source of antibiotics active
against resistant bacteria. J Arid Environ 53:365–371
Sharma SL, Pant A (2001) Crude oil degradation by marine
actinomycetes Rhodococcus sp. Indian J Mar Sci 30:146–150
Sharma AD, Kainth S, Gill PK (2005) Inulinase production using
garlic (Allium sativum) powder as a potential substrate in
Streptomyces sp. J Food Eng 77:1–6
Stamford TLM, Stamford NP, Coelho LCBB, Araujo JM (2002)
Production and characterization of a thermostable glucoamylase
from Streptosporangium endophyte of maize leaves. Bioresour
Technol 83:105–109
Sujatha P, Bapi Raju KVVSN, Ramana T (2005) Studies on a new
marine Streptomycete BT-408 producing polyketide antibiotic
SBR-22 effective against methicillin resistant Staphylococcusaureus. Microbiol Res 160:119–126
Taber WA (1960) Evidence for the existence of acid-sensitive
actinomycetes in soil. Can J Microbiol 6:503
Takizawa M, Colwell RR, Hill RT (1993) Isolation and diversity of
actinomycetes in the Chesapeake Bay. Appl Environ Microbiol
59:997–1002
Tresner HD, Davies MC, Backus EJ (1961) Electron microscopy of
Streptomyces spore morphology and its role in species differen-
tiation. J Bacteriol 81:70–80
Williams ST, Wilkins (1994) Bergey’s manual of determinative
bacteriology, 9th edn. Williams and Wilkins, Baltimore
Williams ST, Cross T (1971) Actinomycetes, methods in microbiol-
ogy, vol 4. Academic Press, New York
Williams ST, Goodfellow M, Alderson G (1989) Genus StreptomycesWaksman and Henrici 1943, 399AL. In: Williams ST, Sharpe
ME, Holt JG (eds) Bergey’s manual of systematic bacteriology,
vol 4. Williams and Wilkins, Baltimore, pp 2452–2492
Yuan W, Crawford DL (1995) Characterization of Streptomyceslydicus WYEC 108 as a potential biocontrol agent against fungal
root and seed rots. Appl Environ Microbiol 61:3119–3128
Zaitlin B, Turkington K, Parkinson D, Clayton G (2004) Effects of
tillage and inorganic fertilizers on culturable soil actinomycetes
communities and inhibitors of fungi by specific actinomycetes.
Appl Soil Ecol 26:53–62
Zhang L, An R, Wang J, Sun N, Zhang S, Hu J, Kuai J (2005)
Exploring novel bioactive compounds from marine microbes.
Curr Opinion Microbiol 8:276–281
World J Microbiol Biotechnol (2009) 25:2103–2111 2111
123