what to do with all our data?
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What to do with all our data?. Tomomi Suwa and Liz Schultheis GK-12 Workshop Session. Diversity Productivity Coexistence. Nutrients and Productivity. Proteins, enzymes, metabolic processes, part of chlorophyll Plants grow larger and produce more seeds and fruits. - PowerPoint PPT PresentationTRANSCRIPT
What to do with all our data?Tomomi Suwa and Liz Schultheis
GK-12 Workshop Session
DiversityProductivityCoexistence
Nutrients and Productivity
• Proteins, enzymes, metabolic processes, part of chlorophyll
• Plants grow larger and produce more seeds and fruits
Nutrients and Productivity in Plant Functional Groups
• While plants benefit from fertilization, not all plants will benefit to the same extent.
Nutrients and Productivity in Grass
• Grass species are notorious for needing high levels of nitrogen fertilizers
• They grow quickly and are browsed commonly by insects and mammals
Nutrients and Productivity in Legumes
• Legume plants have rhizobia bacteria living in their roots, helping them fix nitrogen
Nutrients and Productivity in Forbs
• Forbs = broad leaved, non-woody non-grass species. Commonly found in old fields and meadows.
• Forbs are a very diverse and variable group of plants
• Some forbs have high nitrogen requirements, while other require very little
Nutrients and Diversity
• If fertilization affects different groups of plants in different ways, what do you predict fertilization will do to species richness (# species)?
Our Questions:• How does nutrient addition
affect diversity and productivity?
• Does nutrient addition affect diversity and productivity of groups of plants in different ways?• Grasses• Legumes• Forbs
• Experimental design of schoolyard plots parallels the T7 treatment at the KBS LTER.
• Successional fields with a diversity of grass, legume, and forb species.
• Nitrogen fertilizer addition treatment.
• Every year collect subset of biomass to determine plant productivity.
• Measure the diversity of species.
What are the equivalent treatments in the BEST plots?How does fertilization affect diversity/productivity?
LTER Data Set
• 5 sheets• Raw data• Richness 2003 Data• Biomass 2003 Data• Richness over time (1989-2003)• Biomass over time (1989-2003)
Go to excel spread sheets:
What specific questions can we ask?
Our Question:Do grasses and legumes respond differently to N
addition? What do you predict?
-richness-biomass
We’ll address this question as a group!
Do grass and legume respond differently to
N addition? Break into 4 groups1. Grass Richness2. Grass Biomass3. Legume Richness4. Legume Biomass
Forb Biomass
Our Question:
10
20
40
60
80
100
120
140
160
180
No N Addition
N Addition
e.g. How did forbs respond to Nitrogen addition?
Forb
Bio
mas
s (g) SE
SE Average
To calculate Standard Error (SE):
-Two-step process
€
Variance =(x − x )2∑n −1
€
SE =Var
n
=var (A1:A6)
=sqrt (var(A1:A6))/# replicates)
Let’s go to Excel and graph the data
Data from year 2003
10
20
40
60
80
100
120
140
160
180
No N Addition
N Addition
e.g. How did forbs respond to nitrogen addition?
Forb
Bio
mas
s (g)
How can we tell the difference??
Analyze the data with T-test
• Used to determine if two groups are considered different
10
20
40
60
80
100
120
140
160
180
P-value• The p-value tells whether or not two groups
are different
10
20406080
100120140160180
N- N +
If p ≤ 0.05, two groups are differentIf p > 0.05, two groups are NOT different
e.g. p=0.013
Let’s go to Excel to do t-test!
4 groups:Grass RichnessGrass BiomassLegume RichnessLegume Biomass
What did you find?
12.2
2.25
2.3
2.35
2.4
2.45
2.5
2.55
N-N+
10
0.5
1
1.5
2
2.5
3
N-N+
Graphs: Richness and Biomass 2003Grass Legume
Rich
ness
10
5
10
15
20
25
N-N+
102468
1012141618
N-N+
Biom
ass
(g)
Does the effect of N fertilization change over time?
e.g. forb biomass
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
0
20
40
60
80
100
120
140
160
180
N-N+
Forb
bio
mas
s (g)
Year
Does effect of N change over time?
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
0
20
40
60
80
100
120
140
160
180
N-Linear (N-)N+Linear (N+)
Is this pattern real??
Forb
bio
mas
s (g)
Year
1989
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
0
20
40
60
80
100
120
140
160
180
N-Linear (N-)N+Linear (N+)
Does effect of N change over time?
• Plot scatter graph
Is this pattern real??
r = -0.50P = 0.06
r = -0.24P = 0.39Fo
rb b
iom
ass (
g)
What did you find?
1989
1991
1993
1995
1997
1999
2001
2003
020406080
100120140160180
f(x) = − 0.18981173945445 x + 70.1205519404226R² = 0.00034495123509859
N-Linear (N-)N+Linear (N+)
1989
1991
1993
1995
1997
1999
2001
2003
0102030405060708090
100
N-Linear (N-)N+Linear (N+)
1989199
0199
1199
2199
3199
4199
5199
6199
7199
8199
9200
0200
1200
2200
30
0.5
1
1.5
2
2.5
3
3.5
N-Linear (N-)N+Linear (N+)
Richness and Biomass 1989-2003
1989199
0199
1199
2199
3199
4199
5199
6199
7199
8199
9200
0200
1200
2200
30
0.5
1
1.5
2
2.5
3
N-Linear (N-)N+Linear (N+)Linear (N+)
Rich
ness
Biom
ass
Grass Legume
Do grasses and legumes respond differently to N addition?
• How does N addition affect richness and productivity? ( or )
• Each group fill the table
Richness 2003
Biomass 2003
RichnessOver time
Biomass Over time
Grass
Legume
0
5
10
15
20
1985 1990 1995 2000 2005 2010 2015
Spec
ies R
ichn
ess
Year
- Fertilizer
+ Fertilizer
a Fertilizer: F1, 51.2 = 14.70; P < 0.001Year: F22, 198 = 6.73; P < 0.001Year x Fertilizer: F22, 198 = 1.53; P = 0.068
* ** *** **
***
area of sampling unit is 0.5m x 2m from 1992 onwards
0
5
10
15
20
25
30
35
1990 1995 2000 2005 2010 2015
sqrt
[Liv
e Bi
omas
s (g
m-2
)]
Year
- Fertilizer
+ Fertilizer
a Fertilizer: F1, 40.5 = 53.05; P < 0.001Year: F19, 169 = 7.51; P < 0.001Year x Fertilizer: F19, 169 = 1.53; P = 0.080
Comments/questions?
Richness 2003
Biomass 2003
RichnessOver time
Biomass Over time
Grass 0 0 - +Legume
- 0 - -
Functional Group RichnessData from year 2003