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Unravelling factors affecting Sclerotinia stem rot in canola particularly in the light of fungicide spray decisions Ravjit Khangura 25 Feb 2015

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Page 1: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Unravelling factors affecting Sclerotinia stem rot in canola

particularly in the light of fungicide spray decisions

Ravjit Khangura25 Feb 2015

Page 2: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Outline

1. Sclerotinia levels

2. Epidemiology

3. 2014 Petal testing

4. Case studies

5. Key messages

Photo: Kith Jayasena, DAFWA

Page 3: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Sclerotinia Stem rot incidence in WA in 2014

• Widespread but not severe

• Few crops still suffered economic losses

• Early development of apothecia

• Less favourable conditions post flowering

• Sclerotinia caused an estimated loss of $23M

in 2014

Page 4: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Sclerotinia Life Cycle

• Insert Text here

Page 5: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Epidemiology of SSR: Pre-infection

• Spore trapping

• Apothecia monitoring

• Petal testing

Page 6: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Petal Testing

• 2010-2014

• 6 sites

• Daily temperature, rainfall and relative

humidity recorded

Page 7: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Petal testing – Key findings

• Timing and frequency of petal infection

depended on

– Rainfall*

– Relative humidity*

• Air and soil temperature not significant

Page 8: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Conditions prior to max petal infection

0

20

40

60

80

100

29-Jun 6-Jul

Ra

infa

ll (

mm

), m

ea

n a

ir

an

d s

oil

T (

⁰C),

RH

(%

)

Rain

mean T

mean soil T

mean RH

0

20

40

60

80

100

22-Jun 29-Jun 6-Jul

Ra

infa

ll (

mm

), a

ir a

nd

so

il

T (

C),

RH

(%

)

Rain

mean T

mean soil T

mean RH

Conducive year

Non conducive year

Page 9: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

0

20

40

60

80

100

27/07 3/08

Ra

infa

ll (

mm

), m

ea

n a

ir

an

d s

oil

T (°C

), R

H (

%)

rainfall

mean T

Soil meanT

mean RH

Conditions after max petal infection

0

20

40

60

80

100

27/08 3/09

(Ra

infa

ll (

mm

), m

ea

n a

ir

an

d s

oil

T (°C

), R

H (

%)

rainfall

mean T

Soil meanT

mean RH

Conducive year

Non conducive year

Page 10: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Mean air temperature (Chapman)

0

5

10

15

20

25

11-Jun 1-Jul 21-Jul 10-Aug 30-Aug 19-Sep 9-Oct

Tem

pe

ratu

re (

⁰C)

Mean T 2010

Mean T 2011

Mean T 2012

Mean T 2013

Mean T 2014

Page 11: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Large scale petal testing in 2014

• Southern/South Coastal region

– 10 shires

• >200 samples

– 10 varieties

• sclero selective medium

Page 12: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Mean Petal infection in different shires

0

10

20

30

40

50

60

70

Me

an

PP

I

a

cd

d

ab ab abc abc abc abc

bcd

Page 13: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Percent petal infection-TOS

0

10

20

30

40

50

60

70

80

90

100

16/04/2014 1/05/2014 16/05/2014 31/05/2014

% p

eta

l in

fect

ion

Tme of Sowing

Page 14: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Petal infection vs Stem infection 2014

0

10

20

30

40

50

60

70

0 20 40 60 80 100

Ste

m i

nfe

ctio

n

Petal infection (%)

From 20 of 200 paddock validated for stem infection

Page 15: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Case study 1: Moora

0

10

20

30

40

1700

1800

1900

2000

2100

Product A @

1.5L/ha

Product A @ 1

L/ha

Prosaro @

450ml/ha

Nil

Yield (Kg/ha)

Disease incidence

0

20

40

60

80

100

14/07/14 21/07/14 28/07/14 4/08/14 11/08/14 18/08/14

Ra

in (

mm

), m

ea

n R

H (

%),

PI

(%) Rain

mean RH

PI

Page 16: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Case study 2: Wagin

0

2

4

6

8

10

12

14

1700

1800

1900

2000

2100

2200

Product A @

1.5L/ha

Product A @ 1

L/ha

Prosaro @

450ml/ha

Sumisclex @

1L/ha

Nil

Yield (Kg/ha)

Disease incidence

Page 17: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Row spacing, Prosaro and Density

Treatment Disease

incidence

lsd Yield/h

a

S.E.

Prosaro @ 450ml/ha

Nil 24 12 2359 75

Treated @ 30% bloom 13* 2568*

Variety

Cobra 16* 4 2247 43

Hyola 404 21 2725*

Row spacing

22cm 18 4 2452 51

44cm 19.5 2520

Plant density

15 plants /m2 17.7 4 2418 41

30 plants /m2 19.7 2554*

0

10

20

30

40

50

60

70

80

90

100

3/07 18/07 2/08 17/08

Rainfall

mean air T

mean RH

Estimated ROI from using Prosaro $50/ha

Page 18: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Decision to spray

>40mm rain, >75% RH

Page 19: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Where to from here?

• Regional risk forecast

• Validation

• Yield loss model

• Sclerotinia e-guide

WA Sclerocast

Page 20: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Key Messages

– Breakthrough in understanding the triggers

– >40mm rain and >75% RH in the 3 week

period before and after early bloom

– Temperature doesn’t seem to be a limiting

factor

– WA’s first Sclerocast is on the way

Page 21: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Acknowledgements

• Grains Research and Development Corporation

• A. Van Burgel, M. Aberra, JP Collins, M. Salam, J.

Lemon, WJ MacLeod, C. Beard, A. Smith, J. Galloway

and R. Loughman

• Geraldton RSU, GSARI

• Ashton Gray (ConsultAg), D. Cameron (Farmanco),

Tim Scott (Agvivo)

• Several WA Canola Growers

Page 22: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Thank You

Page 23: Unravelling factors affecting Sclerotinia stem rot in ... Khangura Crop Updat… · Cobra 16 * 4 2247 43 Hyola 404 21 2725 * Row spacing 22cm 18 4 2452 51 44cm 19.5 2520 Plant density

Questions?

Ravjit Khangura089368 [email protected]