transcription factors of the nfat family:regulation...

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Annu. Rev. Immunol. 1997. 15:707–47 Copyright c 1997 by Annual Reviews Inc. All rights reserved TRANSCRIPTION FACTORS OF THE NFAT FAMILY: Regulation and Function Anjana Rao * , Chun Luo * , and Patrick G. Hogan Center for Blood Research and the * Department of Pathology, Harvard Medical School, 200 Longwood Avenue, Boston, Massachusetts 02115; email: [email protected] KEY WORDS: nuclear factor of activated T cells, immunosuppression, cytokine gene regula- tion, inducible gene transcription, signal transduction, lymphocyte activation, calcineurin ABSTRACT As targets for the immunosuppressive drugs cyclosporin A and FK506, transcrip- tion factors of the NFAT (nuclear factor of activated T cells) family have been the focus of much attention. NFAT proteins, which are expressed in most immune- system cells, play a pivotal role in the transcription of cytokine genes and other genes critical for the immune response. The activity of NFAT proteins is tightly regulated by the calcium/calmodulin-dependent phosphatase calcineurin, a pri- mary target for inhibition by cyclosporin A and FK506. Calcineurin controls the translocation of NFAT proteins from the cytoplasm to the nucleus of activated cells by interacting with an N-terminal regulatory domain conserved in the NFAT family. The DNA-binding domains of NFAT proteins resemble those of Rel- family proteins, and Rel and NFAT proteins show some overlap in their ability to bind to certain regulatory elements in cytokine genes. NFAT is also notable for its ability to bind cooperatively with transcription factors of the AP-1 (Fos/Jun) family to composite NFAT:AP-1 sites, found in the regulatory regions of many genes that are inducibly transcribed by immune-system cells. This review dis- cusses recent data on the diversity of the NFAT family of transcription factors, the regulation of NFAT proteins within cells, and the cooperation of NFAT proteins with other transcription factors to regulate the expression of inducible genes. INTRODUCTION Proteins belonging to the NFAT (nuclear factor of activated T cells) family of transcription factors play a central role in inducible gene transcription during the immune response (1–4). Despite their name, NFAT proteins are expressed 707 0732-0582/97/0410-0707$08.00 Annu. Rev. Immunol. 1997.15:707-747. Downloaded from www.annualreviews.org Access provided by University of Wisconsin - Milwaukee on 12/04/17. For personal use only.

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Page 1: TRANSCRIPTION FACTORS OF THE NFAT FAMILY:Regulation …pantherics.com/wp-content/uploads/2017/12/Rao-et-al-1997.pdfT cell receptor (TCR) Ag/MHC, CD3 T cells (1–4, 52) B cell receptor

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Annu. Rev. Immunol. 1997. 15:707–47Copyright c© 1997 by Annual Reviews Inc. All rights reserved

TRANSCRIPTION FACTORS OF THENFAT FAMILY: Regulation and Function

Anjana Rao∗, Chun Luo∗, and Patrick G. HoganCenter for Blood Research and the∗Department of Pathology, Harvard MedicalSchool, 200 Longwood Avenue, Boston, Massachusetts 02115;email: [email protected]

KEY WORDS: nuclear factor of activated T cells, immunosuppression, cytokine gene regula-tion, inducible gene transcription, signal transduction, lymphocyte activation,calcineurin

ABSTRACT

As targets for the immunosuppressive drugs cyclosporin A and FK506, transcrip-tion factors of the NFAT (nuclear factor of activated T cells) family have been thefocus of much attention. NFAT proteins, which are expressed in most immune-system cells, play a pivotal role in the transcription of cytokine genes and othergenes critical for the immune response. The activity of NFAT proteins is tightlyregulated by the calcium/calmodulin-dependent phosphatase calcineurin, a pri-mary target for inhibition by cyclosporin A and FK506. Calcineurin controls thetranslocation of NFAT proteins from the cytoplasm to the nucleus of activatedcells by interacting with an N-terminal regulatory domain conserved in the NFATfamily. The DNA-binding domains of NFAT proteins resemble those of Rel-family proteins, and Rel and NFAT proteins show some overlap in their ability tobind to certain regulatory elements in cytokine genes. NFAT is also notable forits ability to bind cooperatively with transcription factors of the AP-1 (Fos/Jun)family to composite NFAT:AP-1 sites, found in the regulatory regions of manygenes that are inducibly transcribed by immune-system cells. This review dis-cusses recent data on the diversity of the NFAT family of transcription factors, theregulation of NFAT proteins within cells, and the cooperation of NFAT proteinswith other transcription factors to regulate the expression of inducible genes.

INTRODUCTION

Proteins belonging to the NFAT (nuclear factor of activated T cells) family oftranscription factors play a central role in inducible gene transcription duringthe immune response (1–4). Despite their name, NFAT proteins are expressed

7070732-0582/97/0410-0707$08.00

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Table 1 Stimuli that elicit NFAT activation

Receptor/Function Stimulus/Drug Cell type tested References

A. ImmunoreceptorsT cell receptor (TCR) Ag/MHC,αCD3 T cells (1–4, 52)B cell receptor αIg B cells (177–179)CD40 CD40L plus IL-4 B cells (178)FcεRI Ag/IgE Mast cells, basophils (173, 180, 181)FcγRIIIA (CD16) Ag/IgG,αCD16 NK cells (44)

G protein-coupled receptorsm3 Muscarinic Carbachol Stably transfected Jurkat T (66, 86, 182)

acetylcholine receptor cells and PC12pheochromocytoma cells

H1 histamine receptor Histamine Endothelial cells (human J. Carew & A. Rao,Thrombin receptor Thrombin umbilical vein) unpublished

Pharmacological agentsCalcium ionophore Ionomycin, T cells, B cells, mast cells, (1–4, 9, 22, 44, 50,

A23187 macrophages, NK cells, 52, 173, 177–181) andendothelial cells, PC12 J. Kim & P. G. Hogan,cells unpublished

Inhibitor of endoplasmic Thapsigargin T cells (71)reticulum Ca2+-ATPase

not only in T cells, but also in other classes of immune-system cells. NFATproteins are activated by stimulation of receptors coupled to calcium mobi-lization, such as the antigen receptors on T and B cells, the Fcε receptors onmast cells and basophils, the Fcγ receptors on macrophages and NK cells, andreceptors coupled to certain heterotrimeric G proteins (see Table 1). Receptorstimulation and calcium mobilization result in activation of many intracellularenzymes including the calcium- and calmodulin-dependent phosphatase cal-cineurin, a major upstream regulator of NFAT proteins (5, 6). Stimulated cellsinducibly transcribe a large array of activation-associated genes, many of whichare potential targets for NFAT; the genes encode transcription factors, signalingproteins, cytokines, cell surface receptors, and other effector proteins (7–10).

As substrates for calcineurin, NFAT proteins are major targets of the im-munosuppressive drugs cyclosporin A (CsA) and FK506 that have revolution-ized transplant surgery since the introduction of CsA in 1983 (11, 12). Thetoxicity of these drugs, which arises from their ability to inhibit calcineurinin cells outside the immune system (13, 14), has precluded their use in otherclinical situations for which immunosuppressive therapies might be warranted(such as allergy, inflammation, and autoimmune disease). Compounds thattarget NFAT directly, without affecting the phosphatase activity of calcineurin,

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may lack the toxicity of CsA and FK506 while retaining their broad immuno-suppressive effects. Conceivably, more selective immunomodulatory effectsmight be achieved by ablating the functions of individual NFAT proteins inspecific cell types or on selected inducible genes.

This review describes recent advances in our understanding of the structure,regulation, and function of NFAT proteins. Because of space limitations, we donot discuss the potential involvement of NFAT proteins in many biological phe-nomena, including apoptosis, thymocyte development, and immunodeficiencydiseases. For an introduction to earlier work on NFAT and calcineurin, we referthe reader to several excellent reviews (1–7, 11, 15–19).

STRUCTURE AND DISTRIBUTION OF NFAT PROTEINS

Isolation and NomenclatureNFAT was first identified in T cells as a rapidly inducible nuclear factor bindingto the distal antigen receptor response element, ARRE-2, of the human IL-2promoter (20). The induction of NFAT in T cells required calcium-activatedsignaling pathways and was blocked by CsA and FK506 (21). The NFATcomplex that formed on this site contained a cytoplasmic component that wasexpressed in resting T cells but not in fibroblasts, and a nuclear component thatwas expressed in both T cells and fibroblasts upon stimulation with phorbolesters (22). The nuclear component was identified as the ubiquitous transcrip-tion factor AP-1, which consists of dimers of Fos- and Jun-family proteins(reviewed in 1). The cytoplasmic component (also termed preexisting, fromits presence in resting cells) was purified based on its ability to bind indepen-dently, in the absence of AP-1 proteins, to the distal NFAT site of the murineIL-2 promoter (23–25) and as an NFAT:AP-1 complex to the CLE0 elementof the human GM-CSF promoter (26). It appears in the nucleus as a result ofcalcium mobilization and calcineurin activation (22, 27) and migrates on SDSgels with an apparent molecular weight of 120–140 kDa (23, 26, 28, 29).

Over the next few years, studies from several laboratories indicated thatthe preexisting/cytoplasmic component of NFAT was a mixture of proteinsbelonging to a novel family of transcription factors [reviewed in (2–4); seeFigure 1 and Table 2]. The first member of the family (NFATp, later renamedNFAT1) was purified from cytoplasmic extracts of a murine T cell clone byaffinity chromatography using the distal NFAT site of the murine IL-2 promoter(23, 24) and cloned from murine (Ar-5) and human (Jurkat) T cell cDNAlibraries (24, 30). A distinct protein belonging to the same family, NFATc,was purified similarly from bovine thymus, and cDNA encoding it was isolatedfrom a Jurkat T cell cDNA library (25). cDNA clones encoding two otherNFAT proteins, NFAT3 and NFAT4, were isolated from Jurkat T cell and human

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Table 2 Proposed nomenclature for NFAT family proteins and chromosomal location of thegenes

Nomenclature Chromosomal locationProposed Current Human Mouse

NFAT1 20q13.1-13.31 2a (183, 184)NFAT1a NFATp (24), NFATc2 (183), NFAT1A (30) (183, 184)NFAT1b NFAT1b (30)NFAT1c NFAT1c (30)

NFAT2 18q23-qterb 18E4 (183)NFAT2a NFATc (25), NFATc1 (183), NFATc.α (34) (183)NFAT2b NFATc.β (34)

NFAT3NFAT3 NFAT3 (31)

NFAT4 16q21-22 (32) 8D (33)NFAT4x NFATx (32), NFATc3 (33)NFAT4a, b, c NFAT4a, b, c (31)

aTheNfat1 locus maps betweenAdaandGnas(expressed as genetic distance in centiMorgans): centromere-Ada-3.1-(Nfat1, Cebpb)-4.8-Gnas(184).bThe human NFAT2 gene is closely linked to STS marker D18S497 (183).

peripheral blood lymphocyte (PBL) cDNA libraries by cross-hybridization toan NFAT1 probe (31). cDNA clones encoding the NFATx isoform of NFAT4were isolated from Jurkat T cell and murine thymus cDNA libraries (32, 33).Most recently, cDNA encoding a variant of NFATc, NFATc.β, was isolatedfrom a Raji B cell library (34).

A unifying nomenclature for NFAT proteins is proposed in Figure 1 andTable 2, which also lists the chromosomal location of the NFAT genes. Thepresent complicated nomenclature arises largely from the isolation, in different

←−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−Figure 1 Schematic alignment of NFAT proteins predicted from their cDNAs. For nomencla-ture, see Table 2. The region of highest homology within NFAT proteins is the DNA-bindingdomain (DBD), which shows similarity to the Rel homology region of Rel-family transcriptionfactors. A second region of homology is the NFAT homology region (NHR), which binds tocalcineurin (Cn) and is found only in NFAT family proteins. The N- and C-terminal transacti-vation domains (TADs) are indicated. The acidic/hydrophobic motifs in the N-terminal TADsare schematized as adot. The C-terminal LDQTYLDDVNEIIRKEFS motif, where present, isindicated as athick bar. For protein isoforms, identical shading patterns represent identical se-quences. The boundary of each region is labeled above the sequences with numbering referring toposition in the human protein. The lengths indicated are also for the human proteins, except forNFAT1a, which was cloned from mouse. The GenBank accession numbers for these sequences areU02079 (murine NFAT1a), U43341 (NFAT1b), U43342 (NFAT1c), U08015 (NFATc.α), U59736(NFATc.β), L41066 (NFAT3), U14510 (NFATx), L41067 (NFAT4c), U28807 (NFATc3, the murinehomolog of NFATx).

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laboratories, of multiple isoforms and species variants of the same protein; andfrom the fact that the names NFATp (preexisting) and NFATc (cytoplasmic),which were originally used to describe NFAT DNA binding activity, were car-ried over to the recombinant proteins. Because it is conceivable that somemembers of the NFAT family will be neither preexisting nor cytoplasmic incertain cell types, we suggest the simplified nomenclature used by Hoey et al(31) (NFAT1, NFAT2, NFAT3, NFAT4), which follows that employed for othertranscription factors such as those belonging to the STAT and GATA families(35, 36). For simplicity, the proposed nomenclature in Figure 1 and Table 2 isused in the remainder of this review. As we discuss in a later section, DNA-protein complexes containing NFAT proteins come in many forms, and thuswe use NFAT as a general abbreviation for NFAT-family proteins, as well asoccasionally in its original sense to refer to transcriptionally competent, NFAT-containing complexes such as NFAT:AP-1.

Sequence Homologies, Functional DomainsThe predicted primary structures of the four NFAT proteins are shown schemati-cally in Figure 1. Multiple isoforms, most likely derived by alternative splicing,have been described for NFAT1, NFAT2, and NFAT4. Two major regions ofsequence homology, comprising the DNA-binding domain (DBD) (37) and theNFAT homology region (NHR) (30), are represented in all the isoforms. TheDNA-binding domain, which lies between amino acid residues≈400 and≈700in the known isoforms, is highly conserved within the NFAT family and showsmoderate sequence similarity to the DNA-binding domains of Rel-family pro-teins (37–39). The NFAT homology region of≈300 amino acids, which islocated just N-terminal to the DNA-binding domain, shows a lesser degree ofpairwise sequence identity but strong conservation of several sequence motifscharacteristic of the NFAT family (30, 32, 33). The region of NFAT homol-ogy defines a calcineurin-activated regulatory domain that binds calcineurin, isdephosphorylated when calcineurin is activated, and controls the calcineurin-regulated nuclear translocation of NFAT1 (40). The properties of these twodomains are described in more detail in later sections.

The regions of NFAT proteins located outside the DNA-binding and regu-latory domains show relatively little sequence conservation. The≈100 aminoacid region at the very N-terminus of each protein, which behaves as a strongtransactivation domain (TAD) in NFAT1 (41), is not conserved in sequence.The most obvious instance of sequence conservation in the region C-terminalto the DBD is in a region spanning the C-terminal splice site, where NFAT3and NFAT4x contain a sequence highly homologous to the NFAT1c sequenceLDQTYLDDVNEIIRKEFS (Figure 1). A detailed discussion of the transacti-vation domains of NFAT proteins is deferred to a later section.

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Tissue Distribution, Potential Target GenesThe transcript sizes and reported sites of expression of NFAT mRNAs are listedin Table 3. Only in the case of NFAT2a and NFAT2b have distinct transcriptsbeen correlated with protein isoforms (34). The mRNA expression data shouldbe interpreted with some caution: There are significant differences in the ex-pression patterns of NFAT mRNAs reported by different laboratories (Table 3)that may reflect variable contamination with circulating lymphocytes or resi-dent mast cells. Moreover, analysis of NFAT1 indicates that protein and mRNA

Table 3 Tissue distributions of NFAT family members

Tissue distributionMember mRNA size mRNA protein

NFAT1 ∼8 kb (h, m) Thymus, spleen, heart, testis, Thymus, spleen, T cells, B cells, NKbrainr (25) cells, mast cells, monocytes,

PBL, placenta, muscle, spleen, macrophages, olfactory epithelium,thymus, pancreasn (31) olfactory bulb, and endothelial cells

spleen, leukocyte, placentan (32) w,e,i (9, 42–45, 180)B cells, mast cells, T cellsp not present in cardiac or

(173, 177) skeletal muscle, small intestine,liver, kidney, fat tissue, fibroblasts,neutrophilsw (42, 43)

NFAT2a 2.7 kb (h) PBL, testis, thymus, spleen, small T cells, mast cellse (141, 180)(NFATc.α) intestine, prostate, colonn (34), protein not detected in NK cellse (44)

NK cellsn (44) expression in other cells and tissuesspleen, thymus, skin tumorr (25) not determinedmuscle, thymus, spleen, PBL,

testisn (31)muscle, thymus, leukocyte;

low in othersn (32)

NFAT2b 4.5 kb (h) spleen, testis, ovary, small intestine,(NFATc.β) thymus, prostate, colon, PBLn (34)

Muscle, leukocyte, thymus, spleen,testis, ovary, colonn (32)

muscle; low in thymus, spleen,testis, PBLn (31)

NFAT3 3 kb (h) Placenta, lung, kidney, testis, ovary, Not determined4.5 kb (h) heart, colon;4.7 kb (h) low in brain, spleen, thymus,

PBLn (31)

NFAT4 7.0 kb (h) Thymus, leukocyte, low in othersn (32) Not determinedthymus, spleen, LNr (33)muscle, thymus, kidneyn (31)

Abbreviations: h, human; m, mouse; w, protein detected by Western blotting with specific antibodies; e, protein detected byspecific antibody supershift in EMSA; i, protein detected by immune staining; r, mRNA detected by ribonuclease protectionassays; n, mRNA detected by Northern blotting; p, mRNA detected by RT-PCR.

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Table 4 Involvement of calcineurin and NFAT proteins in expression of selected inducible genes

Effects of CsA or NFATCell type testeda FK506b implicatedc References

A. CytokinesIL-1β macrophages (bacteria) partial inhibition n.t. (185)

mast cells (FcεRI) partial inhibition n.t. (186)IL-2 T cells inhibition yes (2–4, 112, 187)IL-3 T cells inhibition yesd (187, 188)

eosinophils, neutrophils inhibition n.t. (189)IL-4 T cells inhibition yes (152, 180, 190)

mast cells inhibition yes and referencestherein

IL-5 T cells inhibition n.t. (191)T cells (Ag/APC) partial inhibition n.t. (188)T cells (ConA/αTCR) no inhibition n.t. (192)T cells (PMA/dbcAMP) inhibition yes (193, 194)mast cells (Ag/IgE) inhibition yes (173, 195)

IL-6 mast cells (FcεRI) inhibition n.t. (186, 196)IL-8 T cells inhibition yese (155)IL-10 T cell (Ag/APC) partial inhibition n.t. (188)

spleen cells partial inhibitionf n.t. (197)IL-13 T cells inhibition yes (198)

T cells(αCD28/PMA± αCD3) stimulation n.t. (199)

GM-CSF T cells inhibition yesg (58, 59, 141, 187,200–202)

endothelial cells partial inhibition yes (9)NK cells (Ag/IgG) inhibition yes (44)eosinophils, neutrophils inhibition n.t. (189)

IFN-γ T cells inhibition yes (203–206)TGF-β T cells stimulation n.t. (207, 208)TNF-α T cells inhibition yes (57, 136, 153, 187)

B cells inhibition yes (57, 137)macrophages (bacteria) partial inhibition n.t. (185)mast cells (Ag/IgE) inhibition n.t. (186, 196)NK cells (Ag/IgG) inhibition yes (44)

B. Surface ReceptorsCD40L T cells inhibition yes (150, 151, 209)IL-2Rα T cells inhibition n.t.h (210)

(CD25)CD69 T cells partial inhibition n.t. (211)CTLA-4 spleen cellsi n.t. altered in (73, 176)

NFAT1−/− miceFasL spleen cellsi n.t. decreased in (176)

NFAT1−/− miceT cell hybridoma inhibition n.t. (212)

(Continued)

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Table 4 Continued

Effects of CsA or NFATCell type testeda FK506b implicatedc References

C. Transcription FactorsNF-κB1 T cells inhibition n.t. (8, 210)c-Rel T cells inhibitionj n.t. (213)Oct-2 T cells inhibition n.t. (214)NFATc T cells inhibition n.t. (25)Nur77 T cells inhibitionk n.t.l (215, 216)

aUnless otherwise specified (in parentheses), T cells were stimulated withαCD3, ConA, or ionomycin, alone or in combi-nation with phorbol ester PMA, and other cells were stimulated with PMA plus ionomycin.bThe effect of CsA or FK506 on the induction of protein, mRNA, or promoter/enhancer activity was assessed.cn.t., not tested. yes, at least one of the criteria is met experimentally: (i) identification of NFAT-binding sites in the pro-moter/enhancer, (ii) mutation of the sites diminishes reporter expression driven by the promoter/enhancer, (iii) multimers ofthe sites confer CsA/FK506-sensitive induction on a linked reporter gene, (iv) overexpression of NFAT proteins enhancesreporter activity.dA T cell-specific enhancer has recently been identified 14 kb upstream of the IL-3 gene. Like the GM-CSF enhancer, theIL-3 enhancer contains three NFAT binding sites that function as enhancer elements (P Cockerill, personal communication).eS. Okamoto & K. Matsushima, personal communication.fCsA inhibited in vivo induction of mRNA in spleen cells and serum IL-10 levels by anti-CD3.gThe NFAT binding site (CLE0) in the GM-CSF promoter also binds the Ets protein, Elf-1 (217).hCsA inhibited the induction of NF-κB1 mRNA.imRNA induction was assessed in spleen cells from mice injected with anti-CD3 antibody.jCsA inhibits c-Rel mRNA induction as well as the nuclear translocation of c-Rel protein.kCsA inhibits the DNA binding activity of Nur77 as well as Nur77 promoter-driven reporter gene expression.lA distinct nuclear factor, belonging to the RSRF/MEF2 family, has been implicated.

expression do not always correlate: Although NFAT1 mRNA has been variablydetected in brain, heart, and skeletal muscle, NFAT1 protein expression has notbeen detected in bulk extracts of these tissues (42, 43). Consistent findings arethat NFAT1 and NFAT2 mRNAs are expressed in peripheral lymphoid tissue(spleen, PBL), and that NFAT4 mRNA is expressed at high levels in the thy-mus, suggesting a role in T cell development. NFAT3 mRNA is expressed atlow levels in lymphoid tissues (31), and thus this protein may be preferentiallyexpressed outside the immune system. NFAT2 mRNA is upregulated in acti-vated T cells and NK cells via a CsA-sensitive mechanism that may involve anNFAT-regulated positive feedback loop (25, 32, 44).

At the protein level, NFAT2 and the major NFAT1 isoforms NFAT1b andNFAT1c are expressed in peripheral T cells and T cell lines (Table 3), but theirrelative expression may vary in different cell lines or T cell subsets. NFAT1 isalso expressed in other classes of immune-system cells (B cells, mast cells, NKcells, some monocytes and macrophages), consistent with NFAT activation andCsA-sensitive gene expression in these cells (Table 1). Additionally, NFAT1 isexpressed in olfactory epithelium (45) and in some endothelial cell lines (9, 42).

Some potential target genes for NFAT proteins are listed in Table 4. NFATinvolvement is reasonably well established for the IL-2, IL-4, GM-CSF, and

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TNF-α cytokine genes in T cells. There is good but less extensive evidencefor NFAT regulation of the IL-3, IL-5, IL-8, interferon-γ (IFN-γ ) and CD40Lgenes in T cells, the TNF-α gene in B cells, and the IL-4 and IL-5 genes inmast cells. In many of the other examples listed in Table 4, inducible gene ex-pression is inhibited by CsA and FK506, suggesting but by no means provingthe participation of calcineurin and NFAT. High concentrations of these im-munosuppressants are known to affect cell metabolism by interfering with thechaperone (peptidyl prolyl isomerase) functions of their immunophilin receptor(46). Further, calcineurin is known to modulate the functions of transcriptionfactors other than NFAT (reviewed in 3). A recent example relates to the CsA-sensitive induction of Nur77 mRNA in activated T cells, which is thought to bemediated by RSRF (MEF2), a nuclear factor distinct from NFAT (47).

REGULATION OF NFAT ACTIVATION

Early Stages of NFAT Activation: Role of CalcineurinThe early activation of NFAT proteins has been investigated for NFAT1 (43,48–52), recombinant NFAT2 (25), and recombinant NFAT4 (33, 53). Threedifferent steps of activation have been defined: dephosphorylation, nucleartranslocation, and increase in affinity for DNA (Figure 2). The consensusfrom these studies is that, in resting cells, NFAT proteins are phosphorylated,reside in the cytoplasm, and show low affinity for DNA. Stimuli that elicitcalcium mobilization (see Table 1) result in the rapid dephosphorylation ofNFAT proteins and their translocation to the nucleus; the dephosphorylatedproteins show increased affinity for DNA. Each step of activation is blocked

−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−−→Figure 2 A model for activation of NFAT proteins. (1) NFAT interacts with calcineurin (CnAand CnB) and is retained in the cytoplasm by a complex of other proteins (shaded) in restingT cells. Without calcium and calmodulin (CaM), the autoinhibitory domain of CnA blocks thecatalytic active site of CnA and calcineurin is inactive. The identified functional regions of NFAT aredenoted TADn for N-terminal transactivation domain, NLS for nuclear localization sequence, DBDfor DNA-binding domain, and TADc for C-terminal transactivation domain. In the resting state,phosphorylation of NFAT proteins masks the NLS and the residues in the DBD that will contactDNA. (2) The binding of calmodulin triggered by increase of intracellular calcium ([Ca2+]i ) leadsto a conformational change in calcineurin that moves the autoinhibitory domain of calcineurin awayfrom the catalytic active site. Activated calcineurin dephosphorylates NFAT. (3) Dephosphorylationcauses a conformational change in NFAT proteins, which exposes the NLS and the residues that willcontact DNA, resulting in nuclear import and increase in DNA binding activity. (4) Withdrawal ofcalcium or inhibition of calcineurin leads to rephosphorylation of NFAT proteins by unidentifiedkinase(s). The rephosphorylated NFAT proteins return to the original state in the cytoplasm. Seetext for details.

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by CsA or FK506, implying that calcineurin is involved, and suggesting thatdephosphorylation is the initial step of activation. It should be noted thatcytokine and LPS receptors, which are not linked to Ca2+ mobilization, are notexpected to activate calcineurin or NFAT.

The activation of NFAT proteins follows precisely the activation of cal-cineurin. In T cells, if intracellular free calcium levels ([Ca2+]i ) remain el-evated, calcineurin activity remains high, and NFAT1 remains activated andnuclear for many hours (43, 51, 52). Conversely if calcineurin activity isinhibited by removal of the calcium-mobilizing stimulus, or by addition ofthe calcineurin inhibitors CsA and FK506 to stimulated T cells, NFAT1 re-verts to its original phosphorylated state within 5–15 min, returns to the cyto-plasm, and again shows a low affinity for DNA (43, 51, 52). Similar resultshave been obtained for recombinant NFAT4 expressed in fibroblasts (53). Thedephosphorylation/rephosphorylation and nuclear import/export cycle can berepeated many times by removal and readdition of ionomycin (51, 53), in-dicating that the activation of NFAT1 and NFAT4 is regulated by a dynamicinterplay between calcineurin and constitutively active kinases. In an analo-gous physiological situation, nuclear NFAT1 returns slowly to the cytoplasmin antigen-stimulated cells as a result of feedback mechanisms that cause a de-cline in capacitative calcium entry and the eventual repletion of calcium stores(52).

Overexpression of mutant calcineurins has pronounced effects on NFATfunction. Constitutively active calcineurin substituted partially for the cal-cium requirement for NFAT-dependent gene expression (54–60). Conversely,an inactive calcineurin, mutated in an essential active site histidine, inhibitedthe movement of recombinant NFAT4 from the cytoplasm to the nucleus ofstimulated fibroblasts (53). Further, a calcineurin A chain fragment containingonly the B subunit-binding region suppressed NFAT-dependent reporter geneexpression in Jurkat T cells, apparently by competing with the endogenous Achain for the regulatory B chain and thereby reducing the calcineurin activityin stimulated cells (61). However, mice deficient in the expression of the majorcalcineurin Aα isoform showed only a moderate impairment of the secondaryimmune response, suggesting that NFAT activation could be mediated by othercalcineurin isoforms (62).

Requirement for Capacitative Calcium EntryA prolonged elevation of [Ca2+]i levels, beyond the initial transient resultingfrom the emptying of calcium stores, is required in T cells to maintain cal-cineurin and NFAT proteins in an activated state. This plateau phase of calciummobilization is the outcome of capacitative calcium entry, a process that cou-ples the depletion of intracellular calcium stores to the influx of extracellular

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calcium through specialized calcium channels (reviewed in 63–65). Capacita-tive calcium entry can be elicited by stimulation of each of the receptors listedin Table 1, as a result of their ability to activate phospholipase C, increase theintracellular concentration of inositol trisphosphate, and deplete intracellularcalcium stores (5, 6, 66). It can also be elicited pharmacologically by treatingcells with thapsigargin, an inhibitor of the endoplasmic reticulum Ca2+-ATPaseneeded for repletion of calcium stores, or with calcium ionophores such as ion-omycin, which deplete the stores directly (67, 68). Addition of SKF96365,an inhibitor of capacitative calcium entry, to stimulated T cells resulted in animmediate deactivation of NFAT1 (52) that resembled the deactivation causedby the calcineurin inhibitors CsA and FK506 (51).

The importance of capacitative calcium entry for NFAT activation is furtheremphasized by the finding that among mutant T cells selected for their inabil-ity to promote NFAT-dependent expression of a toxin gene, a high proportionwere defective in their ability to increase [Ca2+]i in response to ionomycin orthapsigargin (69, 70). Moreover, parallel measurements of [Ca2+]i and NFAT-dependent reporter gene expression in individual T cells indicated that effectiveactivation of the transcriptional functions of NFAT proteins required capacita-tive calcium entry (71). In cells stimulated with thapsigargin or immobilizedanti-CD3, NFAT-dependent reporter gene expression was observed only in thecells that also showed a sustained increase in [Ca2+]i . In T cells that were lesseffectively stimulated, as with soluble rather than immobilized anti-CD3, orunder conditions that would decrease the driving force for calcium influx, onlythe transient peak of calcium mobilization was apparent, and NFAT-dependenttransactivation was less effective or did not occur (71).

Dephosphorylation of NFAT Proteins by CalcineurinIt is likely that NFAT proteins are directly dephosphorylated by calcineurin inactivated cells. When tested in vitro, calcineurin dephosphorylated purifiedNFAT1 (23), NFAT1 in immunoprecipitates (40, 43), recombinant NFAT1 inCOS cell extracts (40), and endogenous NFAT1 in T cell nuclear or cytoplas-mic extracts (49). The phosphatase inhibitor okadaic acid, at a concentration(300 nM) known to inhibit protein phosphatase-1 (PP1) and PP2A completely,did not inhibit the dephosphorylation of recombinant NFAT1 by added cal-cineurin in COS cell extracts (40). This result argues against the involvementof a phosphatase cascade initiated by calcineurin and resulting in PP1 or PP2Aactivation, such as that previously described in hippocampus (72).

The evidence relating dephosphorylation to changes in NFAT function isstrong but still circumstantial. Dephosphorylation is a major biochemicalchange detected in NFAT1, NFAT2, and NFAT4 after cell stimulation (25, 33,43, 50–53) and clearly precedes the nuclear import of endogenous NFAT1 (50),

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suggesting that dephosphorylation is required for nuclear import. Dephospho-rylation may also be required for optimal DNA binding. Stimulation of T cellswith ionomycin or through the T cell receptor (TCR) results in a substantialincrease in the intrinsic DNA-binding affinity of NFAT1 (50–52) and NFAT2(73) for the distal NFAT site of the murine IL-2 promoter. Treatment of cellextracts with calcineurin or alkaline phosphatase also results in increased DNAbinding of NFAT1 (49), suggesting that phosphorylated residues directly orindirectly mask a region of DNA contact in NFAT1. A model incorporatingthese findings is discussed below (Figure 2).

Targeting of Calcineurin to the NFAT Regulatory DomainThere is evidence that NFAT proteins interact directly with calcineurin withinthe cell. NFAT1 in T cell extracts binds to calcineurin immobilized on calmodu-lin-sepharose beads (48, 51). Binding can be demonstrated using both thephosphorylated form of NFAT1 from resting cells and the physiologically de-phosphorylated form from stimulated cells (48, 51). The ability of bacteriallyexpressed recombinant NFAT1 to bind to calcineurin in vitro (40) shows thatthe interaction is not mediated by other proteins in cell lysates.

Analysis of recombinant NFAT fragments shows that the NFAT-calcineurininteraction involves the N-terminal≈400 residues of NFAT1, NFAT2, andNFAT4 (40, 53), and thus the interaction maps to the conserved NHR (30). Theconserved residues in this region are clustered in several short sequence motifs(30), which include the three SP motifs (consensus SPxxSPxxSPxxxxx[D/E][D/E]) noted earlier (32, 33). In NFAT1 and NFAT4, the N-terminal region con-taining the conserved residues functions as a calcineurin-activated regulatorydomain: It contains phosphorylated serine residues that are dephosphorylatedby calcineurin, and it regulates the subcellular localization of covalently linkedprotein domains in a calcium- and calcineurin-dependent way (40, 53). The reg-ulatory domain also contains a candidate nuclear localization sequence (NLS)whose mutation prevents the nuclear import of full-length NFAT1 (40). Whenoverexpressed, a fragment of NFAT2 containing this regulatory domain has a“dominant negative” effect, in that it downregulates NFAT-dependent transac-tivation mediated by endogenous or recombinant NFAT proteins (25, 74).

The NFAT-calcineurin interaction appears to be another example of target-ing interactions involving protein phosphatases (40). For instance, the catalyticsubunit of PP1, which shows little substrate specificity in vitro, is targeted tosubstrates in glycogen, in myofibrils, and in sarcoplasmic reticulum by distincttargeting subunits (75). Calcineurin itself is directed to the inositol trispho-sphate and ryanodine receptors by an interaction with FKBP12 (76), and tothe RII subunit of protein kinase A and relevant subsynaptic substrates by itsinteraction with the A-kinase anchor protein AKAP-79 (77, 78).

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Models and SpeculationsA model for NFAT activation is depicted in Figure 2. NFAT proteins are tar-geted via their conserved regulatory domains to inactive calcineurin in restingcells; depending on the affinity, these interactions may be either transient orstable. Increases in [Ca2+]i lead to the activation of calmodulin (79); binding ofcalmodulin to a region near the C-terminus of calcineurin displaces the autoin-hibitory domain of calcineurin and exposes the calcineurin active site (80). Ac-tivated calcineurin dephosphorylates associated NFAT proteins at multiple sitesin their regulatory domains. The NLS in the regulatory domain, and potentiallya DNA recognition region in the DNA-binding domain, become accessible inthe dephosphorylated proteins. One possibility (not shown) is that the residuesimmediately adjacent to the NLS or to the region of DNA contact are directlymodified with phosphates and thus masked. Alternatively, dephosphorylationmay expose these regions by producing an intrinsic conformational change inNFAT proteins (Figure 2). The model also depicts a calcineurin-dependentinteraction of the regulatory domain with a larger protein complex (possiblycalcineurin itself) in the cytoplasm. This is inferred from the fact that althoughthey are small enough to diffuse through nuclear pores, N-terminal fragmentsof NFAT1 and NFAT4 are retained in the cytoplasm of resting cells and moveto the nucleus only upon activation (40, 53). Dephosphorylated NFAT proteinsare still capable of binding calcineurin and may continue to bind it in activatedcells.

The rapid reversal of NFAT activation by CsA and FK506 implies a con-tinuing interplay between NFAT kinases and calcineurin (51, 53). Both setsof enzymes can act on NFAT proteins in the nucleus: Activated calcineurinmaintains nuclear NFAT proteins in their activated state, while the kinasesrephosphorylate the proteins when calcineurin is inhibited with CsA or FK506.An interesting possibility is that the enzymes move to the nucleus upon activa-tion, as demonstrated for calcineurin overexpressed with recombinant NFAT4in fibroblasts (53).

OTHER SIGNALING PATHWAYS THAT INFLUENCENFAT ACTIVATION

Many signaling pathways and proteins, other than calcineurin, modulate NFATfunction in T cells (see Figure 3). Since most of the experiments involvemeasuring reporter gene expression driven by a composite NFAT:AP-1 site,their interpretation is necessarily complex, and it is not always apparent whethercalcineurin, NFAT proteins, or AP-1 proteins are affected. For the sake ofbrevity, we have limited our discussion to the effects of pathways normally

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Figure 3 A simplified view of some signaling pathways reported to influence NFAT-dependenttranscription (see text). Molecules discussed in the text are boxed. Unidentified signaling moleculesand pathways are indicated by question marks. Key: CaMK, multifunctional Ca2+/calmodulin-dependent protein kinases; CAML, calcium-signal modulating cyclophilin ligand; Cn, calcineurin;1Cn, constitutively active calcineurin lacking the autoinhibitory domain; JNK, c-Jun N-terminalkinase; DN, dominant negative; SRF, serum response factor.

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activated in antigen-stimulated cells, concentrating on cases in which NFATfunction has been specifically addressed, and where there is an indication of themechanisms involved. Experiments involving transgenic or “knockout” miceare not described except where a mechanistic interpretation is possible.

TCR-Proximal Steps: Lck, ZAP-70, VavThe earliest consequence of TCR cross-linking is the activation of tyrosine ki-nases including Lck and ZAP-70, and the tyrosine phosphorylation of multipleintracellular substrates including Vav (81, 82). Stimulation of T cells with acombination of a calcium ionophore and PMA bypasses these early steps butmimics the effects of TCR cross-linking on gene transcription (6). Both Lckand ZAP-70 are required for calcium mobilization in T cells (82), and overex-pression of wild-type or constitutively active Lck upregulated NFAT-dependentreporter gene expression in Lck JCam.1 cells (83). Likewise, overexpressionof kinase-deficient ZAP-70 inhibited NFAT activity in Jurkat T cells stimulatedwith anti-TCR antibodies but did not affect NFAT activity in PMA/ionomycin-stimulated cells, suggesting that an early TCR-proximal step was involved (84).

ZAP-70 interacts with Vav, an SH2 domain–containing protein that is rapidlyphosphorylated on tyrosine residues upon T cell activation (85). In turn, Vav in-teracts through its SH2 domain with SLP-76, a tyrosine-phosphorylated proteinthat also binds the adapter protein Grb2 (85a). Overexpression of Vav and/orSLP-76 augmented basal and TCR-stimulated NFAT-dependent reporter geneexpression in Jurkat cells (85a, 86). The effect of Vav was specific for T cellreceptor stimulation, since NFAT activation through the muscarinic receptorwas not augmented by Vav. Likewise, there was no augmentation in cells lack-ing Lck, CD45, or the TCRβ chain, and Vav overexpression did not result inincreases in [Ca2+]i or in the levels of tyrosine-phosphorylated proteins. Vav-induced augmentation was blocked by the calcineurin inhibitors CsA and FK506and by overexpression of dominant negative forms of Ras and Raf, suggestingthat Vav functioned upstream of these molecules or in a parallel pathway.

PMA-Activated Signaling PathwaysSingle-cell measurements indicate that PMA enhances the calcium sensitivityof NFAT-dependent reporter gene expression, as assessed by the number of cellsexpressing the reporter gene at different [Ca2+]i levels (71). The magnitude ofthis effect is striking: In the presence of PMA, an average threefold increasein the sustained plateau level of [Ca2+]i results in reporter gene expression inhalf of the responsive cells (71). The most likely effect of PMA is to inducethe de novo synthesis and posttranslational modification of AP-1 and othertranscription factors (6), thereby increasing the transcriptional effectiveness ofnuclear NFAT proteins. PMA-activated kinases may also directly phosphorylate

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NFAT2 (25), although there are no data on whether this influences NFAT2function. In contrast, PMA stimulation does not, under the conditions so fartested, alter the mobility of NFAT1 on SDS gels, its subcellular distribution, orthe function of its major transactivation domain (41, 52).

Mechanistically, the major known effect of PMA in T cells is to activateprotein kinase C, Ras, and Raf; the effects of activated and dominant nega-tive versions of these proteins on NFAT-dependent transactivation in T cellshave been previously reviewed (6). A major conclusion is that Ras is indis-pensable for NFAT function: Activated Ras substitutes effectively for PMA,and together with constitutively active calcineurin it provides a full stimulusfor NFAT-dependent reporter gene expression, whereas dominant negative Rasinhibits NFAT activation in response to TCR stimulation (6, 87, 88). MultipleRas effectors including Raf and the Ras-related GTPases Rac and Rho havebeen described (88–94). The Raf pathway is clearly important for AP-1 induc-tion, via activation of the Raf substrate MEK1, a dual specificity kinase, andits substrates the MAP kinases ERK-1 and ERK-2 (reviewed in 95). In T cells,however, constitutively active Raf or MEK1 was not as effective as activated Rasin substituting for PMA and synergizing with ionomycin to stimulate NFAT-driven transcription. Consistent with these findings, dominant negative versionsof these proteins only partially inhibited Ras-mediated activation (88, 96). Aconstitutively active form of another Ras effector, Rac-1, activated AP-1-drivenreporter gene expression maximally by a pathway not involving ERK but didnot activate an NFAT-driven reporter gene efficiently, even in combination withionomycin and constitutively active MEK1 (88). Based on these results, it hasbeen proposed that yet another Ras effector pathway exists in T cells and isneeded for maximal expression of a reporter gene driven by NFAT:AP-1 (88;see Figure 3). It will be interesting to determine whether this effector pathwaytargets NFAT proteins, AP-1 proteins, or both.

Pathways Related to Calcium MobilizationIn addition to activating calcineurin, increases in [Ca2+]i lead to the activationof other calmodulin-dependent enzymes (79). Among these, two multifunc-tional Ca2+/calmodulin-dependent protein kinases (CaMK) may regulate NFATactivity. A constitutively active form of a T cell CaMKII, CaMKIIγB, partiallyinhibited both NFAT- and AP-1-driven reporter gene expression in Jurkat T cellsand blocked the ability of constitutively active calcineurin to augment IL-2 pro-moter function (97, 98). The opposite effect was observed for constitutivelyactive CaMKIV/Gr, which enhanced NFAT activity in large part by activatingAP-1 (99). The enhancement by CaMKIV/Gr, which was not blocked by domi-nant negative Ras, may be mediated through upregulation of the transcriptionalfunction of serum response factor (SRF) and the consequent induction of c-Fos

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(99, 100). Curiously, both CaMKs are activated by CaM and Ca2+ during T cellactivation, exhibit broad substrate specificity, and phosphorylate the same min-imal consensus substrate sequence (101), suggesting that the opposite effects ofthe two CaMKs may involve their targeting to different intracellular substrates.

Overexpression of a cyclophilin-binding protein, CAML, significantly in-creased the basal level of intracellular calcium in transfected T cells and par-tially substituted for the calcium requirement for NFAT-dependent transcription(102). This effect required extracellular calcium and was inhibited by CsA orFK506, suggesting that CAML functioned by facilitating calcium entry intocells (102).

Costimulatory PathwaysThe T cell surface molecule CD28 delivers a costimulatory signal necessaryfor maximal activation through the TCR (103). CD28 stimulation results in astriking augmentation of IL-2, TNF-α, GM-CSF, and IFN-γ production (104),which has its basis in a large increase in steady state mRNA levels (105). Asignificant component of the effect is posttranscriptional (106), possibly arisingfrom mRNA stabilization (105). However, CD28 stimulation also results inthree- to eightfold increases in reporter gene expression driven by the IL-2,IL-3, GM-CSF, and IFN-γ promoters (107, 108). The CD28 response elements(CD28REs) in these genes have been mapped (107, 108) and shown to bindinducible factors variously identified as Rel proteins (109–111), NFAT proteins(112, 113), and≈35-kDa protein(s) visualized by UV cross-linking to a labelledoligonucleotide probe but not yet characterized molecularly (108, 114). It isinteresting that in both the IL-2 and GM-CSF promoters, the sequences thatconfer responsiveness to HTLV-1 Tax map to the CD28REs (113, 115).

The nature of the signaling pathways involved in CD28 signaling has beenstudied in many laboratories (116). Stimulation of T cells with anti-CD28antibodies elicits a spectrum of responses, in part resembling those elicited byactivation of the TCR, but differing from those resulting from stimulation withthe physiogical ligand of CD28, B7.1 (117). The consensus is that the CD28pathway is not CsA sensitive (104, 118).

In considering whether NFAT proteins play a role in CD28-mediated costim-ulatory pathways, two observations are relevant. First, at least some NFAT pro-teins may be activated via CD28-dependent, calcineurin-independent pathways,as judged by the CsA-insensitive induction of low levels of NFAT-dependentreporter gene expression and nuclear NFAT DNA-binding activity in T cellsstimulated with anti-CD28 and PMA (74). Second, NFAT proteins can bind tothe CD28REs of both the IL-2 and GM-CSF promoters, which bind Rel-familyproteins (108–111, 115). Thus a plausible mechanism linking CD28 stimulationto cytokine gene transcription would be activation of NFAT proteins through

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a distinct pathway that may synergize with the calcium/calcineurin pathway,followed by binding of the activated proteins to CD28REs and conventionalNFAT sites in the promoter and enhancer regions of NFAT-inducible genes.The potential interplay between NFAT and Rel proteins at the CD28REs andotherκB-like sites is discussed in a later section.

Other Signaling PathwaysA variety of biological and pharmacological agents including protein kinase A(PKA) activators (119–123), glucocorticoids (124–126), transforming growthfactor-β (TGF-β) (127), retinoic acid (128), and vitamin D3 (129) are knownto inhibit IL-2 production by activated T cells. Of these, PKA activators andvitamin D3 have been reported to affect NFAT function.

PKA In a mouse T cell hybridoma stimulated with thapsigargin, dibutyrylcAMP inhibited NFAT:AP-1-dependent reporter gene expression, and the inhi-bition was substantially reversed by PMA, suggesting either that AP-1 proteinswere limiting in the treated cells or that a PKA-mediated inhibition of NFATfunction could be compensated for by an increase in AP-1 (71). Whether PKAactivators inhibit AP-1 function, NFAT function, or both remains unclear. Inseveral studies in which EL-4 mouse thymoma cells were used, PKA activa-tors had no effect on NFAT DNA-binding activity (119, 121, 122); this findingcould reflect the fact that NFAT is constitutively nuclear in EL-4 cells (130),in which the calcineurin A chain bears a spontaneous activating mutation in itsautoinhibitory domain (60). In primary human T cells, however, prostaglandinE2 (PGE2) significantly inhibited the induction of both NFAT:AP-1 and AP-1DNA-binding activity (123); whereas in primary CD4+ murine T cells, choleratoxin, one of whose several effects is to elevate cAMP (131), inhibited theinduction of NFAT but not AP-1 DNA-binding activity (120). The inhibitoryeffects of PKA may not involve AP-1, however. An established target for PKAis the transcription factor CREB, which becomes phosphorylated on serine-133;based on the findings that CREB is phosphorylated at the same site, presumablyby other kinases, upon stimulation through the TCR (132, 133), and that thymo-cytes from transgenic mice expressing a dominant negative version of CREBshowed significantly decreased induction of several Fos- and Jun-family m-RNAs (132), it has been suggested that CREB is involved in upregulating AP-1activity in stimulated T cells. Clearly, further experiments are necessary to elu-cidate the molecular effects (if any) of PKA on the phosphorylation status andfunction of NFAT proteins in cells. If the evidence favors a consistent effectof PKA on NFAT activity, a further point that will need to be considered isthat PKA activators upregulate IL-4 and IL-5 production while inhibiting IL-2production (120, 121).

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VITAMIN D3 The natural immunosuppressant vitamin D3 downregulates IL-2production by activated T cells. The inhibitory effects of vitamin D3 are me-diated through the vitamin D3 receptor, which binds as a heterodimer with itspartner the retinoid X receptor to sequences overlapping the distal NFAT siteof the human IL-2 promoter, thereby preventing the binding of the NFAT:AP-1complex to the same site (129).

GLUCOCORTICOIDS NFAT and NFAT:AP-1 complexes do not appear to bedirect targets for inhibition by glucocorticoids, because neither the inductionof NFAT DNA-binding activity nor the level of NFAT:AP-1-dependent reportergene expression was affected by dexamethasone treatment of Jurkat T cells(124–126).

RETINOIC ACID, TGF-β The inhibitory effects of retinoic acid and TGF-β havebeen mapped to the octamer element of the IL-2 promoter (127, 128), whichis now known to be a composite NFAT:AP-1:Oct site (112). However, neithercompound influenced NFAT:AP-1-dependent reporter gene expression, sug-gesting that neither directly affected the function of NFAT.

DNA BINDING AND TRANSACTIVATION

DNA BindingThe DNA-binding domains of NFAT proteins are likely to be similar in three-dimensional structure to the DNA-binding domains of Rel-family proteins, andto utilize corresponding loops to make some of their contacts with DNA (37–39).The domains (≈300 amino acids) are highly conserved within each family (60–70% pairwise identity for NFAT proteins; 41–61% for mammalian Rel proteins)and show a low but significant level of sequence identity (≈17%) in pairwisecomparisons between individual members of the NFAT family and the Relfamily (31). The minimal DNA-binding domain (≈190 amino acids) of NFAT1(37) corresponds almost exactly to the N-terminal specificity domain of NF-κBp50, which makes the majority of base-specific contacts with DNA (134, 135).This domain contains the highly conserved recognition loop (RFRYxCEG)of Rel-family proteins, represented in the NFAT family as the equally highlyconserved RAHYETEG sequence in which each of the underlined residues islikely to contact DNA (37, 39).

A striking difference between NFAT and Rel proteins is that whereas Rel pro-teins are dimeric in solution and bind DNA as obligate dimers, NFAT proteinsare monomeric in solution and when bound to DNA (31). NFAT proteins canalso bind to certainκB-like sites (see below): in this case, an NFAT monomerbinds to the 5′ half-site, and a second NFAT monomer binds to the symmetrical

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Table 5 Site selectivities of NFAT proteins

IL-2 (distal NFAT)NFAT −AP-1 +AP-1 IL-4 (P1)a TNF-α (κ3) References

NFAT1 +++ ++++ +++ ++ (31, 33, 34)NFAT2 ++ ++++ +++ − (31–34)NFAT3 + ++++ +++ n.t. (31)NFAT4 ± ++++ ± − (31–33)

aResults from Hoey et al (31) using bacterially-expressed recombinant DNA-bindingdomains. Using full-length recombinant proteins expressed in COS cells, Ho et al (33)found that NFAT2 bound least well to the IL-4 P1 site (binding decreases in the orderNFAT1> NFAT4> NFAT2).

3′ half-site, without stabilization of the binding by protein-protein interactionsbetween the monomers (136). This property has led to the classification ofNFAT proteins as “monomeric Rel proteins” (39). The monomeric nature ofNFAT proteins explains why the minimal DNA-binding fragment of NFAT1,which lacks the region corresponding to the C-terminal dimerization domainof Rel proteins, can bind independently to DNA (37). Moreover, it providesa rationale for why the N-terminal two thirds of the Rel similarity region ofNFAT proteins is more highly conserved in sequence than the C-terminal onethird (31).

Although all four NFAT proteins are capable of binding cooperatively withAP-1 proteins to the distal IL-2 promoter NFAT site (31, 32, 34), they showcharacteristic site preferences when tested for DNA binding in the absence ofAP-1 (Table 5). Of the four NFAT proteins, NFAT1 displays the highest affinityfor each of the three sites shown in Table 5, binding in the order IL-4 P1>

distal IL-2> TNF-α κ3. In contrast, NFAT4 binds poorly or not at all to thedistal IL-2 site (31–33), and neither NFAT2 nor NFAT4 bind under standardconditions to the TNF-α promoterκ3 site (33, 34). As a consequence, NFAT2bfails to activate the TNF-α promoter when transiently expressed in T or B celllines, while NFAT1 is highly active in this respect (34). Curiously, overall TNF-α production is not impaired in NFAT1-deficient mice (73), possibly becausethe TNF-α promoter contains additional NFAT sites capable of binding theother NFAT proteins (137), or because the other NFAT proteins do function attheκ3 site in the genomic context.

Transactivation DomainsAnalysis of NFAT1 suggests that both the N- and C-terminal regions of NFATproteins contain transcriptional activation domains (30). The N-terminal TADof NFAT1 has been localized to the N-terminal≈100 residues of NFAT1, whichlike the corresponding regions of NFAT2b, NFAT3, and NFAT4 is rich in acidic

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residues and proline (30–32, 34). In this region, NFAT1 contains at least oneacidic/hydrophobic patch,25QDELDFSILFDYEYL39, that resembles those im-plicated in transactivation by acidic activation domains (138, 139). Similaracidic/hydrophobic patches are present in NFAT2b (4LEDQEFDFEFLFEF17),NFAT3 (8DEELEFKLVFGEE20), and NFAT4 (9HDELDFKLVFGED21) (31,32, 34). Despite the very limited sequence conservation, therefore, theN-terminal regions of all these proteins could conceivably function as acidictransactivation domains. The corresponding region of NFAT2a, which lacksthe acidic/hydrophobic patches, is also capable of transactivation (C Luo, un-published), perhaps through interaction with a distinct set of nuclear proteins.

When expressed as a GAL4 fusion protein, the region of NFAT1c locatedC-terminal to the DNA-binding domain is also capable of transactivation (41).Again, this region shows only limited sequence similarity to the correspondingregions of NFAT2b, NFAT3, or NFAT4, except for the LDQTYLDDVNEI-IRKEFS sequence mentioned previously, which spans a C-terminal splice siteand is represented in NFAT3 and NFAT4x (see Figure 1). Although more ex-periments are needed to establish the significance of this conserved segment,it is interesting that the NFAT1c isoform, which possesses this sequence, isreproducibly more active in transactivation assays than the NFAT1b isoform,which differs in this portion of the C-terminal sequence (41).

Cooperation with AP-1NFAT proteins show a characteristic ability to cooperate with AP-1 in DNAbinding and transactivation (reviewed in 1). The minimal DNA-binding domainof NFAT1 suffices for cooperative binding with AP-1 dimers to the distal NFATsite of the murine IL-2 promoter (37). The interaction between NFAT proteinsand AP-1 involves binding of these unrelated transcription factors to adjacentsites on DNA and results in an approximately 20-fold increase in the stabilityof the NFAT1:AP-1:DNA complex compared with the DNA-protein complexcontaining NFAT1 alone (23, 27, 140). In DNA-protein complexes containingNFAT1, Fos, and Jun, the Fos-Jun dimer shows a remarkable orientationalpreference that is not apparent in the absence of NFAT1, in that the AP-1 half-siteproximal to the bound NFAT1 monomer is occupied exclusively by Jun (140).The paradigm of NFAT-AP-1 cooperation has been recognized in a number ofdifferent cytokine promoter/enhancer regions (reviewed in 1) (Table 6). Notethat cooperative binding implies not merely that two transcription factors canoccupy adjacent sites on DNA, but that the DNA-protein complex containingboth transcription factors is significantly more stable or of higher affinity thanthose containing the individual proteins (27, 140, 141).

When expressed without its transactivation and regulatory domains in T cells,the DNA-binding domain of NFAT1 is found in the nucleus and can mediate

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Table 6 Selected NFAT binding sites in gene regulatory regions

Promoter Species Site Sequences References

Group I NFAT AP-1

IL-2 m −280 AGGAAA ATT TGTTTCA (20, 27,h −280 AGGAAA AAC TGTTTCA 162, 163)m −135 AGGAAA AAC AA AGGTA (21, 162,h −135 AGGAAA AAT GAAGGTA 163)

m, h −90 TTGAAA ATA TGTGTAA (112, 218)m −45 TGGAAA AAT AATA TGGr (112)h −45 TGGAAA AAT ATTA TGGr

IL-4 m P1 TGGAAA ATT TTATTACAr (219)h P TGGAAA TTT TCGTTACAr (161)

IL-5 m P TGGAAA CCC TGAGT TTr (173, 195)h P TGGAAA CAT TTAGTTTr

GM-CSF h GM330 CGGAGCCCC TGAGTCA (141)enhancer h GM420 TGGAAA GA− TGACATCA r

h GM550 AGGAAA GCA AGAGTCA r

CD40L m, h NM-1 TGGAAA ATG TGCTTCGr (150, 151)

IFN-γ h TGGAAA TTT TTTTGTAr (205, 206)

IL-13 h TGGAAA ATC CAGTGTCGCAr (198)

CTLA-4 m −207 TGGAAA AT− GTACTCAAr (220)h −195 TGGAAA AT− GTATTCAAr

T AConsensus GGAAA ATN TGAGTCA TGACGTCA

A NC (AP-1) (CREB/ATF)

Group II κB like sites adjacent sites

hTNF-α κ3/CRE GGAGAAACCC ATGAGCTCA r (ATF-2/Jun) (136, 154)hIL-8 −81/−65 TGGAATTTCC TCTGACATAA (155). . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

E-selectin PDI GGGGATTTCC TCTTTACTGGATGT (9, 157). . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

HIV-1 LTR κB/SP-1 GGGACTTTCC AGGGAGGCGTGGCC (Sp1) (201)hGM-CSF CK-1 (CD28RE) AGGAGATTCC ACAGTTCA (115, 201)mIL-2 CD28RE/AP-1 AAGAAATTCC AGAGAGTCA (AP-1) (112, 113)

For each element, a continuous sequence is divided by inspection into adjacent NFAT and AP-1 sites in Group I, and aκB-like site and the adjacent sequence in Group II. Introduced gaps are indicated by dashes. Nucleotides known or presumedto interact with NFAT proteins are shown in boldface type. Known and probable binding sites for AP-1/CREB/ATF proteinsare underlined, with nucleotides fitting the consensus shown in boldface type. The Group I NFAT consensus is based on thesequences shown. The human IL-4 P element and the IL-13 element could equally well be classified in Group II.m, mouse; h, human; r, sequence shown is for the noncoding strand.

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strong NFAT-dependent transactivation in cells stimulated with ionomycin andPMA (41). Under these circumstances, mutation of either the NFAT site orthe adjacent AP-1 site abrogated reporter gene expression, indicating that tran-scription required recruitment of AP-1 proteins by the NFAT1 DNA-bindingdomain. Recruitment of unrelated transcription factors by strong cooperativeinteractions involving DNA-binding domains could be a general theme in tran-scriptional regulation: The isolated DNA-binding domains of GATA proteinsand MyoD1 induce cell differentiation (142, 143), and protein-protein interac-tions have been detected between the DNA-binding domains of AP-1 and Etsproteins (144), AP-1 and NF-κB (145), C/EBP and NF-κB (146), and c-Junand the glucocorticoid receptor (147).

NFAT BINDING SITES IN GENE REGULATORY REGIONS

Table 6 presents a compilation of known and potential NFAT binding sitesin the regulatory regions of selected inducible genes. The largest and best-documented class consists of sites on which NFAT proteins form a cooperativecomplex with AP-1 or other bZIP proteins (Group I). NFAT proteins also bindto sites that are, or resemble, binding sites for conventional Rel-family proteins(Group II). Sites that bind NFAT proteins with relatively high affinity in theapparent absence of an adjacent AP-1 site have also been described (112).

NFAT:AP-1 SitesThis subject has been extensively reviewed (1, 141), and only salient points areemphasized here. Composite elements that support the cooperative binding ofNFAT and AP-1 proteins have been noted in the promoter regions of the IL-2,IL-4, IL-5, and CD40L genes, and in the GM-CSF enhancer (Table 6, Group I).Based on a comparison of these sequences, the NFAT binding site is presentedas a 9-bp element positioned next to a 7–8-bp element capable of binding dimersof AP-1, CREB/ATF, or other bZIP-family proteins. The spacing of the NFATand AP-1 elements appears to be narrowly specified, with no more than a singlebase pair insertion or deletion permitted between the two sites. Sites in whichthe GGAAA core sequence is preceded by a T rather than an A appear to bindNFAT proteins more strongly. The identified AP-1/CRE sites range from strongelements, as in the GM330 AP-1 and GM420 CRE sites, to barely recognizablevariants of the consensus sequence, as in the IL-4 and CD40L sites. The relativestrengths of the NFAT and AP-1 elements can vary reciprocally over a widerange: The−90 IL-2 site does not bind NFAT proteins independently andbinds AP-1 proteins only moderately well, but supports a strong cooperativeinteraction between these two proteins. Conversely the CD40L element pairsa strong NFAT site with a relatively weak AP-1 site. Note that the CTLA-4

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sites in Table 6 were identified by inspection, within the region shown to befunctional by promoter deletions. Also note that NFAT:AP-1 cooperation at theIFN-γ , IL-13, and CTLA-4 sites has not yet been established.

The possibility that NFAT binding to Group I-like sites in vivo always in-volves AP-1 or bZIP proteins deserves serious consideration. In the absenceof NFAT, AP-1 proteins do not bind detectably to the distal NFAT site of themurine IL-2 promoter (23, 140), a moderately high-affinity NFAT-binding sitethat is the prototype for a cooperative NFAT:AP-1 site (23). It is possible, there-fore, that even strong NFAT sites with no obvious adjacent AP-1 sites, such asthe−45 site of the IL-2 promoter (Table 6), do in fact support the formationof cooperative NFAT:AP-1 complexes in the context of larger transcriptionalcomplexes assembled on genomic promoters and enhancers. Conversely, re-porter gene expression driven by multiple AP-1 sites has been reported to beselectively sensitive to CsA and FK506 in T cells (148, 149); this may reflect,in part, the ability of AP-1 proteins to recruit NFAT proteins to adjacent sites.An important technical point when assessing protein binding to these sites byelectrophoretic mobility shift assay is that the use of insufficiently long oligonu-cleotides may lead to the classification of an NFAT site as independent of AP-1(see 150 and 151 for the CD40L site), or an AP-1 site as independent of NFAT.Carrying this reasoning further, if either half of a composite NFAT:AP-1 siteis of low affinity, the weak binding of the relevant protein to that site may beentirely missed if the adjacent site or the partner protein that binds to it is notrepresented in the assay.

The relative order of the NFAT and AP-1 sites is fixed as shown in Table 6:reversal of the order, such that the NFAT site lies 3′ to the AP-1 site on the DNAstrand represented, permits independent but not cooperative binding (J Jain,A Rao, unpublished). By this analysis, the interaction of the bZIP protein c-Mafwith NFAT1 on the IL-4 promoter (152) is unlikely to involve the same type ofprotein-protein interactions as in prototype NFAT:AP-1 complexes (140), sinceit occurs on the sequence AGTTGCTGAAACCAAGGGAAAAT GAGTT (non-coding strand), with the order of NFAT (bold and underlined) and c-Maf (un-derlined) sites reversed with respect to the canonical NFAT:AP-1 site.

κB-Like SitesNFAT proteins also bind several sequences that resemble binding sites for Relfamily proteins (Group II). Theκ3 element in the TNF-α promoter, whichbehaves as a strong CsA-sensitive element in stimulated T cells (153), is thebest-documented example of a functional site in this group (136). As mentionedabove, NFAT1 appears to bind with much higher affinity than NFAT2 andNFAT4 to this site (33, 34). Detailed analysis indicates that the GGA sequence(bold in Table 6) is a nucleating site that is preferentially occupied at low NFAT1

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concentration; mutation of this sequence eliminates binding to the site (136). Athigher concentrations, a second molecule of NFAT1 binds to the other half-site,contacting the GGG sequence on the opposite strand, but the monomers boundto the two half-sites make few if any cooperative interactions with each other.An adjacent site that binds ATF-2/Jun dimers is required for maximal functionof theκ3 element in reporter assays, although there are no stabilizing protein-protein interactions between NFAT1 and ATF-2/Jun bound to the adjacent sites(154).

The IL-8 site, which was originally identified by inspection as aκB-likesite (155), may also fit the criteria for classification in Group II. The distancebetween the presumed CRE and the GGAA sequence identified by mutation asfunctional (155) matches the spacing in the TNF-α κ3 element more closelythan the spacing in any of the Group I sites. The IL-8 site does not bind any ofthe known Rel proteins in electrophoretic mobility shift assays using nuclearextracts from stimulated Jurkat T cells, but the complex formed reacts withanti-NFAT1 antibodies (S Okamoto, K Matsushima, personal communication).Moreover, production of IL-8 and induction of the IL-8 promoter are bothstrongly inhibited by FK506 in Jurkat T cells (155), in which NF-κB inductionis not sensitive to CsA or FK506 (21), implying that this site behaves in vivoas a functional NFAT site.

The κB sites in the E-selectin promoter and the HIV-1 LTR are other ex-amples ofκB-like sites that bind NFAT1 in vitro (Table 6). Where known,the nucleotides (TTCC) that are complementary to those contacted by boundNFAT1 are shown in bold, and comprise the nucleating site. Both sites are wellestablished as Rel binding sites (156, 157), but it is not known whether NFATbinding at these sites has a functional effect.

CD28 Response ElementsThe CD28REs of the IL-2 and GM-CSF promoters bind Rel-family proteins aswell as NFAT proteins (109–113, 115), and we have therefore classified themasκB-like elements in Group II. The CD28RE of the GM-CSF promoter isthe same as its CK-1 site (115). Like the IL-8 site, however, these elementshave characteristics of both Group I and Group II sites, although the Rel-likecharacteristics may predominate.

The binding of NFAT proteins to the IL-2 promoter CD28RE has been sug-gested to involve their cooperation with AP-1 proteins bound to a strong adja-cent AP-1 site (112). Based on our earlier discussion of composite NFAT:AP-1sites, this would only be possible if the NFAT protein bound to the weak NFATsite, AAGAAA, at the 5′ end of the element; however, the spacing between theNFAT and AP-1 sites is not optimal for cooperation (Table 6). The functionalsequence in the CD28RE is thought to be the GGAA sequence on the noncoding

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strand (TTCC in Table 6), which could serve as the nucleating sequence forbinding of NFAT proteins to aκB-like site (see discussion above): Mutation ofthis site diminishes or eliminates IL-2 promoter function in response to anti-CD3 (112, 158). Indeed, NFAT proteins appear to be capable of binding to theCD28RE independently of AP-1, as observed in nuclear extracts from Jurkat Tcells stably expressing HTLV-1 Tax (113). Given the available evidence, it isplausible that NFAT proteins could bind in either mode, to one or both ends ofthe CD28REs. It remains to be determined, however, whether either mode ofNFAT binding is functional in terms of CD28 costimulation.

Interactions Among NFAT and Rel Proteins onκB-Like SitesAn interesting question is the degree to which NFAT and Rel proteins contributeto transactivation atκB-like sites or CD28REs. Mixed dimers of NFAT and NF-κB proteins have not been observed, and so any givenκB-like site is expectedto bind either NFAT or NF-κB, and not a combination of both proteins. Therelative contributions of NFAT and Rel proteins to transactivation from the sitewill depend in part on the concentrations of NFAT, AP-1, and Rel proteins inthe nucleus at any given time of stimulation, and in part on relative affinitiesof these proteins for the site in question. Since NFAT proteins are activatedprimarily by calcium-mobilizing stimuli, whereas Rel proteins are activatedby many types of stimuli (159, 160), the cell type and mode of stimulationemployed will be crucial. Bound NFAT and Rel proteins may have similar orantagonistic effects on promoter function.

An interesting example of an interaction between NFAT and NF-κB is pro-vided by their competition on the P sequence of the human IL-4 promoter(TGGAAATTTTC, Table 6), which binds both NFAT and NF-κB (161). Thecorresponding P1 sequence in the mouse IL-4 promoter (TGGAAAATTTT,Table 6) differs by two nucleotides from the human sequence, and hence bindsNFAT with fourfold higher affinity and NF-κB with fourfold lower affinity thandoes the human sequence. In consequence, the activity of the human IL-4 pro-moter was repressed by PMA stimulation and by coexpression of RelA, whilethat of the mouse IL-4 promoter was not. Moreover, substitution of the mousesequence for the human P element eliminated the sensitivity of the human IL-4promoter to PMA stimulation and to Rel A (161), consistent with the proposedcompetition between NFAT and NF-κB for binding to the P site.

ROLE OF NFAT PROTEINS IN GENE TRANSCRIPTION

Multiple NFAT Binding Sites in Gene Regulatory RegionsA notable feature of NFAT-dependent promoters and enhancers is the presenceof multiple NFAT binding sites. This theme, first recognized in the IL-2 (162,

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163) and IL-4 (164, 165) promoters, has since been extended to the GM-CSFenhancer (141), two more sites in the IL-2 promoter (112), the TNF-α promoter(137), and a newly identified enhancer located 14-kb upstream of the IL-3 gene(P Cockerill, personal communication). Each of these regulatory regions con-tains three to five sites for NFAT binding, within a total length of 200 to 300base pairs. The implication is that higher-order, synergistic interactions amongNFAT-containing complexes are required for effective transcription. A similarhypothesis was proposed based on studies of reporter expression, using con-structs driven by multiple NFAT:AP-1 sites (71, 166). T cells stably expressingsuch constructs showed reporter expression in only a proportion of stimulatedcells, and changes in the strength or effectiveness of the stimulus changed thenumber of expressing cells rather than the level of reporter expression, suggest-ing that NFAT-dependent transcription was initiated in the stimulated cells onlywhen they attained a threshold level of nuclear NFAT proteins that permittedtandem occupancy of multiple sites. In vivo footprinting of the IL-2 promotersuggested that these long-range interactions were not limited to NFAT, but in-volved the synergistic assembly of all the relevant transcription factors into acoordinate promoter complex (167). Indeed, transcriptional activation in manysystems requires the ordered assembly of a cooperative transcription complex,containing transcription factors, coactivators, and the core transcriptional ma-chinery (168).

Cell Specificity of Cytokine Gene ExpressionEach cell type in the immune system produces a characteristic pattern of cy-tokines during an immune response (169). For instance, IL-2 is produced by Tcells, IL-4 by T cells and mast cells, IFN-γ by T cells and NK cells, and TNF-αby virtually every cell type. Other inducible genes such as CD40L, CTLA-4,and FasL are also selectively expressed. The cytokine profiles of T cells dif-ferentiating down the Th1 and Th2 pathways have been well documented; Th1cells preferentially produce IL-2 and IFN-γ , whereas Th2 cells produce IL-4,IL-5, IL-10, and IL-13 (169–171). In many pathological situations, the balancebetween Th1 and Th2 patterns of cytokine production determines the clinicaloutcome of the immune response (103, 170).

The proto-oncogene c-Maf, a member of the bZIP family, is held to beresponsible for the selective expression of IL-4 in Th2 cells (152). Within theT cell lineage, c-Maf is expressed in Th2 but not in Th1 cells. Coexpressionof c-Maf and NFAT1 in Th1 cells and B cells results in strong synergisticactivation of the IL-4 promoter, reflecting their interaction with the P0 NFATsite and an adjacent c-Maf binding site. As discussed above, the orientation andspacing of the NFAT and Maf-binding sites within this region suggest that theNFAT:Maf interaction differs substantially from the conventional NFAT:AP-1

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interaction, and protein-protein interactions between NFAT and c-Maf remainto be demonstrated. If the interactions are in fact cooperative, it is likely that theprotein-protein contacts involved will differ from those observed on compositeNFAT:AP-1 sites.

What determines the cell-specific expression of inducible genes? As notedabove, the sequences of the NFAT sites and their arrangement relative to sitesfor other transcription factors show considerable variability. For instance, theinteraction of NFAT and Oct proteins differs on the IL-2 and IL-4 promoters,being cooperative in the former case and competitive in the latter (172); bothNF-κB and NFAT:AP-1 are required for the function of the human GM-CSFpromoter (59); and GATA as well as NFAT proteins have been implicated inIL-5 gene induction (173–175). Selective gene expression is likely to be de-termined by the particular NFAT proteins and cooperating transcription factorsexpressed in individual cell types, or by cell-specific nuclear coactivators (orcorepressors) that mediate interactions between these transcription factors andthe basal transcription complex.

Target Genes for NFAT Proteins: Lessonsfrom NFAT1-Deficient MiceThe specialized functions of NFAT1 in the immune response have been exploredby targeted disruption of the NFAT1 gene (73, 176). In both cases the targetedexon was in the DNA-binding domain, and its disruption resulted either in theexpression of a deleted version of the protein without DNA-binding activity(176), or in no protein expression (null phenotype) (73). Except for a moderatedegree of splenomegaly, the NFAT1-deficient mice developed normally andwere immunocompetent, as they showed no impairment in IL-2, IL-4, TNF-α,and IFN-γ production by stimulated spleen cells. Surprisingly, however, certainprimary and secondary immune responses were markedly enhanced, with atendency toward the development of a late Th2-type response in at least threeexperimental situations: increased intrapleural accumulation of eosinophils andincreased serum IgE levels in an in vivo model of allergic inflammation (73);increased serum IgE levels in response to immunization with TNP-ovalbumin(176); and more efficient differentiation toward a Th2 phenotype in spleen cellsstimulated in vitro with IL-4 and anti-CD3 (176).

Given the evidence that NFAT proteins are essential transcription factors forthe expression of cytokine genes, the overall immunocompetence of NFAT1-deficient mice suggests that many genes that are targets for NFAT1 may beredundantly controlled by another NFAT protein. However, the unusual pheno-type of enhanced immune responsiveness is consistent with the possibility thatsome genes are unique or preferred targets for NFAT1. In normal mice, activa-tion of NFAT1 may elevate the expression of inhibitory cytokines or cell-surface

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receptors in certain cells, or decrease the expression of activating effector pro-teins, thus dampening the overall magnitude of the immune response and per-haps limiting the late expression of Th2-type cytokines. By analogy, proteinkinase C (PKC), which is activated early in stimulated T cells, has both positiveeffects and feedback inhibitory effects on the subsequent response: It modifiesand activates the positive regulators Ras and Raf but also decreases [Ca2+]i byinhibiting phospholipase C-γ and activating plasma membrane calcium pumps(131). Alternative explanations for the phenotype of NFAT1-deficient mice arethat changes in early cytokine production (176) alter the balance of cytokinesproduced at later times, thus skewing the overall pattern of the response; or thatunless counterbalanced by the presence of NFAT1, the other NFAT proteinswill favor transcription of the cytokine genes characteristic of Th2 cells.

Given the fact that NFAT proteins or their mRNAs have been detected outsidethe immune system, some target genes for NFAT1 and other NFAT proteins arelikely to be expressed in nonlymphoid cells. For instance, mRNAs encodingall four NFAT proteins are expressed in testis and/or ovary and in skeletalor cardiac muscle, suggesting a possible involvement in reproduction and inmuscle development or function. New members of the NFAT family may alsobe discovered, with presently unsuspected roles.

FUTURE DIRECTIONS

The molecular characterization of NFAT proteins has greatly advanced ourunderstanding of inducible gene transcription in the immune system. How-ever, the basis for the cell-specific expression of genes induced via the recep-tor/calcium/calcineurin pathway remains to be understood. This will involvedefining the functions of individual NFAT proteins, both biochemically andby targeted gene disruption; exploring the mechanisms by which calcineurin,kinases, and other signaling molecules regulate the phosphorylation status,subcellular localization and transactivation functions of NFAT proteins; anddetermining whether NFAT-mediated transcription involves cooperation withcell-specific transcription factors or coactivator proteins. Other questions arewhether NFAT proteins play a role in other biological and immune processes,such as lymphocyte development and programmed cell death; or in diseaseprocesses such as immunodeficiency or autoimmune diseases or oncogenesis.

ACKNOWLEDGMENTS

We thank the many colleagues who generously provided us with unpublishedinformation and discussed their research with us, and we apologize sincerelyto those whose work we have overlooked or omitted to cite because of spacelimitations. We are grateful to all the members of our laboratories for their

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contributions to this review, particularly Dr. J Aramburu for help with Figure 2.Work in the A.R. and P.G.H. laboratories was supported by grants from theNational Institutes of Health and Hoffmann-La Roche, Inc.

Visit the Annual Reviews home pageathttp://www.annurev.org.

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