the role of metal ions in photosynthesis. the green plants produce ~ 1 g glucose every hour per...

57
The role of metal ions in photosynthesis

Upload: kerry-smith

Post on 28-Dec-2015

218 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The role of metal ions in photosynthesis

Page 2: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis is the highest volume biochemical process in the Earth, as approximately 200 billion ton carbohydrate equivalent is formed per year in this reaction, although only less than 1% of the radiation reached the Earth is utilised in the photosynthesis.

~10 Nobel prize

Solar energy – chemical energy

The photosynthesis

Page 3: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis

Page 4: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis

Page 5: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis

Page 6: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis
Page 7: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosynthetic

system – The photosynthetic reaction centres

The electron transport chain between the two photosystems

Mn-catalysed oxidation of water to dioxygen (OEC)

The role of the ribulose 1,5-diphosphate in the photosystem

Evolution – vs. Future outlooks

Photosynthesis

Page 8: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosynthetic

system – The photosynthetic reaction centres

The electrontransport chain between the two photosystems

Mn-catalysed oxidation of water to dioxygen (OEC)

The role of the ribulose-1,5-diphosphate in the photosystem

Evolution – vs. Future outlook

Photosynthesis

Page 9: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis – utilization of sunlight

Page 10: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis – utilization of sunlight

Page 11: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Pigments of photosynthesis

Chlorophyll A

Page 12: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Pigments of photosynthesis

Page 13: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Sztróma

Structurisation of the pigment materials in the thylakoid membrane in the monomeric antenna complex of the photosystem II (CP43 and CP47 in the antenna complex and D1/D2 in the reaction centre) A and B Figs. show different views.

The „antenna” of photosynthesis

Science 2004, 303, 1831

Stroma

Lumen

Page 14: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Structurisation of the pigment materials in the thylakoide membrans in the antenna complexes of photosystem I. A and B Figs. show different views.

A

B

Current Opinion in Structural Biology 2002, 12, 244

The „antenna” of photosynthesis

Page 15: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Transport of the photon energy by resonance transfer

Page 16: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The positive characteristics of magnesium ions in the photosynthesis

Assure the spatial arrangement of the chlorophyll molecules. The Mg2+-

ion is perfect for this role: because its size is optimal to form stable

complex with the tetrapyrrole ring, furthermore it prefers to form

complexes with coordination number six.

The Mg2+ ion forms only weak spin-orbit coupling with the excited state

of the tetrapyrrole ring, and thus it hinders the transfer of the energy of

light in the forms of fluorescence or heat.

The Mg2+ ion in contrast with most of the transition metal ions can not

redox react with the surronding ligands and thus the photosynthetic

reaction centres are defended from the unwanted irreversible

decomposition.

Page 17: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis - photosystems

Page 18: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthesis - photosystems

Page 19: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Structurisation of the PS II dimer pigment-protein complex in the thylakoid membrane

Science 2004, 303, 1831

Photosyntesis – photosystems II

Page 20: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

ATP synthesis

Page 21: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosystem – The

photosynthetic reaction centres

The electron transport chain between the two photosystems

Mn catalysed oxidation of water to dioxygen (OEC)

The role of ribulose 1,5-diphosphate in the photosystem

Evolution – vs. Future outlook

Photosynthesis

Page 22: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

1.) Iron-sulphur proteins (Ferredoxin):

Electrontransfer metalloproteins

Page 23: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

2.) Cytochromes:

Hem a Hem c

Cytochrome c

Electrontransfer metalloproteins

Page 24: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

3.) Blue copper proteins (Plastocyanin):

Electrontransfer metalloproteins

Page 25: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The photosynthetic electron transport Z scheme

Page 26: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Relative arrangement of the molecules participating in the primary electrontransport processes of PS II system.

bikarbonátion

-karotin

Science 2004, 303, 1831

Elements of the photosynthetic electrontransport

bicarbonate

Page 27: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Schematic picture of the b6f complex of the eucaryota photosynthetic electrontransport system.

Elements of the photosynthetic electron transport

Page 28: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The long range electron transfer and transport systems

Schematic picture of a part of the eucariote photosynthetic electrontransport system (cytochrome f → plastocyanin → P700).

Page 29: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Reduction of NADP+

+H+

+2e-

Page 30: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosystem – The

photosynthetic reaction centres

The electron transport chain between the two photosystems

Mn-catalysed oxidation of water to dioxygen (OEC)

The role of ribulose 1,5 diphosphate in photosystem

Evolution – vs. Future outlook

Photosynthesis

Page 31: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Oxidation of water

Page 32: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

+1,2

Oxidation of water

Page 33: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Suggested structures of the OEC (WOC)

Coordination Chemistry Reviews 2008, 252

Page 34: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

OEC models from the same X-ray structures

Coordination Chemistry Reviews 2008, 252

(A) (B)

Page 35: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The amino acids indicated by different colours belong to different protein subunits: yellow - D1, orange - D2 and green - CP43.

Schematic figure of the OEC catalytic centre

Science 2004, 303, 1831

Page 36: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

2H2O S0 S1 S2 S3 S4 O2h h h h

3Mn3+

1Mn4+2Mn3+

2Mn4+1Mn3+

3Mn4+

1Mn3+

3Mn4+1Mn3+

3Mn4+

e- e- e- e-

H+ H+ 2H+

40ms 100ms 250ms ~1ms

OEC (Oxygen Evolving Complex): The lifetime, the composition of the complex and evolution of protons and electrons in the oxidation steps of water.

Schematic figure of oxidation of the water

Page 37: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

(The question marks indicates that the Mn-Mn distances are not known.)

Chemical Reviews 1996, 96, 2947

A proposed mechanism of the stepwise oxidation of water

Page 38: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Biochimica et Biophysica Acta 2001, 1503

A proposed mechanism of the stepwise oxidation of water

Page 39: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Coordination Chemistry Reviews 2008, 252

A proposed mechanism of the stepwise oxidation of water

Page 40: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Proposed structure of OEC (WOC) - 2011

Nature 2011, 473, 55

Page 41: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Favourable characteristics of the manganase ions in the photosynthesis

(i) Versatility in the stable or metastable oxidation states of manganese:

MnII, MnIII, MnIV, MnVI, MnVII.

(ii) Labile coordination of the ligands.

(iii) Propensity to form high spin complexes.

(iv) The freshly formed mixed valence oxides MnO2–x×nH2O catalyses

efficiently the disproportionation of hydrogene-peroxide, in which

oxygen is also formed. Such oxide-hydroxide compounds might also be

present, when photosynthesis was evolved.

(v) Besides the metabolism of oxygen, the Mnn+ ions occur in other

enzymes, such as the Mn containing superoxide dismutases as well as

catalases and peroxidases.

Page 42: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

1. O2 channel; 2 and 3. hydrophil channels for the substrate and the proton.

Hydrophil and hydrophob channels around the OEC

Coordination Chemistry Reviews 2008, 252

(1)

(3)

(2)

Page 43: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Modeling the water flow around the OEC

Biochemistry, 2010, 49, 1873

Page 44: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosystem – The

photosynthetic reaction centre

The electron transport chain between the two photosystems

Mn catalysed oxidation of water to dioxygen (OEC)

The role of ribulose 1,5-diphosphate in the photosystem

Evolution – vs. Future outlook

Photosynthesis

Page 45: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Reactions of the dark process

Page 46: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Schematic picture of the CO2 fixation catalysed by ribulose 1,5 diphosphate carboxylase enzyme.

Reactions of the dark process

Page 47: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Schematic picture of the CO2 fixation catalysed by ribulose 1,5 diphosphate carboxylase enzyme.

CH2O

C

HC

HC

CH2O

O

OH

OH

P

PP

CO2

CH2O

C

C

HC

CH2O

OH

OH

OH

PP

P

CH2O

C

C

HC

CH2O

O

OH

C OHO

-OC

O

OOH

H

CH2O

C

C

OH

O

O-

P

2

Reactions of the dark process

Page 48: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

X-ray structure of the ribulose 1,5-diphosphate carboxylase enzyme C. Reinhardtii green algae. The L subunits are indicated by blue and green, while the S subunits by yellow colour.

Structure of the ribulose 1,5 diphosphate carboxylase

Journal of Molecular Biology 2002, 316, 679

Page 49: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Active centre of the ribulose 1,5-diphosphate carboxylase enzyme of C. Reinhardtii green algae in the presence of a model substrate.

Active centre of the ribulose 1,5-diphosphate carboxylase

Journal of Molecular Biology 2002, 316, 679

Page 50: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Absorption of light and transfer in the photosystem – The

photosynthetic reaction centre

The electron transport chain between the two photosystems

Mn catalysed oxidation of water to dioxygen (OEC)

The role of ribulose 1,5-diphosphate in the photosystem

Evolution – vs. Future outlook

Photosynthesis

Page 51: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Evolution of photosynthesis

Reaction centre of the purple bacteria

Green sulphur bacteria:

Page 52: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

The photosynthesis

Page 53: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Artificial photosynthesis

Page 54: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Coordination Chemistry Reviews 252 (2008) 444

Artificial photosynthesis

Page 55: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Coordination Chemistry Reviews 252 (2008) 456

Artificial photosynthesis

Page 56: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis

Photosynthetic car?

Page 57: The role of metal ions in photosynthesis. The green plants produce ~ 1 g glucose every hour per square meter of leaf surface. This means that photosynthesis