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The Brain from retina to extrastriate cortex

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Page 1: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

The Brain

from retina to extrastriate cortex

Page 2: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Neural processing responsible for vision

• photoreceptors• retina

– bipolar and horizontal cells– ganglion cells (optic nerve)

• optic nerves• optic chiasma (X)• lateral geniculate body• striate cortex• extrastriate cortex

Page 3: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Photoreceptors

Ganglion cells

Light

Lateral inhibition

• Edge detection and contrast enhancement

• Bipolar, Horizontal and Ganglion cells

Page 4: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

1000 0

100

Lateral inhibition

• If no activity in neighboring photoreceptors,

output = output of photoreceptor

Page 5: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

100100 100

0

Lateral inhibition

• if activity in neighboring photoreceptors,– output is decreased, possibly absent

Page 6: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

100100 100

0

(-.5) (-.5)

-50 -50

+

(1.0)

100

200200 200

0

(-.5) (-.5)

-100 -100

+

(1.0)

200

Lateral inhibition via addition and negative weights

Page 7: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

cornea

crystallinelens

retina: photoreceptors = rods + cones

opticnerve

Optic nerve

• axons of the ganglion cells– 1 million optic nerves– 120 million photoreceptors

Page 8: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

From light to vision

Lateral Geniculate Nucleus (LGN)

StriateCortexGeniculo-Striate Pathway

Page 9: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

(LGN)

StriateCortex

Striate cortex(primary visual centre)

• Neurons are edge detectorsfires when an edge of a particular orientation is present

Page 10: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

(LGN)

StriateCortex

Striate cortex(primary visual centre)

• Neurons are edge detectorsfires when an edge of a particular orientation is present

frequent output

vertical bar

Page 11: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

(LGN)

StriateCortex

Striate cortex(primary visual centre)

• Neurons are edge detectorsfires when an edge of a particular orientation is present

infrequent output

diagonal bar

Page 12: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Edge detection

• each cell “tuned” to particular orientation– vertical– horizontal– diagonal

• cats: only horizontal and vertical• humans: 10 degree steps• edges at particular orientations and positions

Page 13: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Extrastriate cortex(beyond the striate cortex)

V1

Page 14: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Extrastriate cortex

• Each area handles separate aspect of visual analysis– “V1-V2 complex”: Map for edges– V3: Map for form and local movement– V4: Map for colour– V5: Map for global motion

• Each is a visual module– connects to other areas– operates largely independently

Page 15: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Douglas A. Lyon, Ph.D.Chair, Computer Engineering Dept. Fairfield

University, CT, USA

[email protected], http://www.DocJava.com

Copyright 2002 © DocJava, Inc.

Page 16: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Background

• It is easy to find a bad edge!• We know a good edge when we see it!

Page 17: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

The Problem

• Given an expert + an image.

• The expert places markers on a good edge.

• Find a way to connect the markers.

Page 18: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Motivation

• Experts find/define good edges

• Knowledge is hard to encode.

Page 19: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Approach

• Mark an important edge

• Pixels=graph nodes

• Search in pixel space using a heuristic

• A* is faster than DP

Page 20: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Assumptions

• User is a domain expert

• Knowledge rep=heuristics+markers

Page 21: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Applications

• Photo interpretation

• Path planning (source+destination)

• Medical imaging

Page 22: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Photo Interpretation

Page 23: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Echocardiogram

•3D-multi-scale analysis

Page 24: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Path Plans, the idea

Page 25: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Path Planning-pre proc.•hist+thresh

•Dil+Skel

Page 26: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Path Planning - Search

Page 27: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

The Idea

• The mind selects from filter banks

• The mind tunes the filters

Page 28: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Gabor filter w/threshold

• The Strong edge is the wrong edge!

Page 29: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Canny Edge Detector

Page 30: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Mehrotra and Zhang

Page 31: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells
Page 32: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells
Page 33: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Sub bands for 3x3 Robinson

Page 34: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Sub Bands 7x7 Gabor

Page 35: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Gabor-biologically motivated

Page 36: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Log filters=prefilter+laplacian

2 1

2 2 ex 2 y 2

2 2

1

4 1 x2 y2

2 2

ex 2 y 2

2 2

2 f (x, y) 2 f

x2 2 f

y2

Page 37: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Mexican Hat (LoG Kernel)

Page 38: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

The Log kernel

Page 39: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Oriented Filters are steerable

Page 40: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Changing Scale at 0 Degrees

Page 41: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Changing Phase at 0 degrees

Page 42: The Brain from retina to extrastriate cortex. Neural processing responsible for vision photoreceptors retina –bipolar and horizontal cells –ganglion cells

Summary

• Heuristics+markers= knowledge• Low-level image processing still needed• Global optimization is not appropriate for

all applications• Sometimes we only want a single, good

edge