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The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals http://cfcp.uchicago.edu/~mmhedman/compton1.html

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Page 1: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

The Age of Things:Sticks, Stones and the Universe

Molecular Dating and the Many Kinds of Mammals

http://cfcp.uchicago.edu/~mmhedman/compton1.html

Page 2: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Proconsul

Page 3: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html
Page 4: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

WARNING! Astrophysicist talking about Mammalian Phylogeny!

Page 5: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html
Page 6: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Monotremes Marsupials

Non-Placental Mammals

Page 7: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Rodentia

Page 8: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Lagomorpha

Page 9: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Chiroptera

Page 10: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Carnivora

Page 11: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Primates

Page 12: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Cetacea

Page 13: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Atriodactyla

Page 14: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Perissodactlya

Page 15: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Xenarthra

Page 16: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Proboscidea

Sirenia

Hyracoidea

PholidotaDermoptera Tubilentata

Page 17: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Insectivora

MacroscelideaScandentia

Page 18: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Fossil Records of the Different Orders

Page 19: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Relationships between the orders derived from morphological characteristics

Page 20: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Perhaps orders arose rapidly when the dinosaurs died out

Page 21: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Molecular Data

Hedgehog TGCCAATTCCGTTCTGTTGTGAGAATGGACTACATGGTGTTCTTCAGCTTSloth TGCCAAATTAGTTCCGTCATGAGAATGGACTACATGGTCTACTTCAGTTT

Sirenian TGCCAATTCCGTTCCGTTATGAAGATGGACTACATGGTCTACTTCAGCTTElephant TGCCAATTCCGTTCCGTTATGAGGATGGACTACATGGTCTACTTCAGCTTAardvark TGCCAATTCCGTTCCGTTATGAGGATGGACTACATGGTCTACTTCAGCTT

Mouse TGCCACTTCCGTTCCGTGGTCAGTTTGGATTACATGGTCTTCTTCAGCTTRabbit TGCAAATTCGATTCTGTTATACCCATGGAATACATGGTCTTCTTTAGCTTHuman TGCCAATTTGTTTCCGTCATGAGAATGGTCTACATGGTATACTTCAGCTT

Flying Fox TGCCAATTCCGTTCTGTCATAAAGATGGACTACATGGTCTATTTCAGCTTWhale TGCCAATTCCGTTCCGTCATGAGGATGGACTACATGGTCTACTTCAGCTT

Pig TGCCAGTTCCGTCATGAGGATGGACTGGACTACATGGTCTACTTCAGCTTHorse TGCCAATTCCGTTCTGTTGTGAGCATGGACTACATGGTCTACTTCAGCTTCat TGCCAGTTCCGTTCTGTCATGACGATGGACTACATGGTCTACTTCAGCTT

Page 22: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Chimp Gorilla OrangutanHuman 1.24% 1.62% 3.08%Chimp 1.63% 3.12%Gorilla 3.09%

Human Chimp Gorilla Orangutan

Page 23: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

All animals do not accumulate mutations at the same rate

Page 24: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

Page 25: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 26: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 27: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 28: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 29: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Accumulates More Mutations

Page 30: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Accumulates More Mutations

Page 31: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 32: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Tree Based on Morphological Characters Tree Based on Molecular Characters

Page 33: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Afrotheria

Euarchonotoglires

Xenartha

Laurasiatheria

Page 34: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Human Chimp Gorilla Orangutan

1%

2%

3%

Sivapithecus

Proconsul

15

10

5

Mil

lio

ns

of

year

s ag

o

Calibrating the molecular clock

ProconsulSivapithecus

Page 35: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 36: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

W X Y Z

30 Mutations 10 Mutations 10 Mutations30 Mutations

5 Mutations5 Mutations

Time 1

Time 0

Time 2

X Y ZW 40 50 70X 30 50Y 40

Page 37: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

A simpler problem: Flipping Coins

Probability of getting five heads, given the number of Coin Flips

Page 38: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

A simpler problem: Flipping Coins

Probability of getting five heads, given the number of Coin Flips

Assumed Probability of each number of Coin Flips

Page 39: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

A simpler problem: Flipping Coins

Probability of getting five heads, given the number of Coin Flips

Assumed Probability of each number of Coin Flips

Likelihood the coin was flipped a given

number of times

Page 40: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html
Page 41: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Eutherians

120 Million Years Ago

Page 42: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Eutherians

Afrotheria

Xenarthra and others

105 Million Years Ago

Page 43: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Afrotheria

Xenarthra

Euarchontoglires

Laurasiatheria

?

90 Million Years Ago

Page 44: The Age of Things: Sticks, Stones and the Universe Molecular Dating and the Many Kinds of Mammals mmhedman/compton1.html

Next Time

Meteorites and the Age of the Solar System