teaching molecular structure using jmol
DESCRIPTION
Teaching molecular structure using Jmol. Robert M. Hanson Department of Chemistry, St. Olaf College Northfield, MN 55057 August 19, 2009 238th ACS National Meeting Washington, DC. The Jmol Project. Jmol molecular visualization project Open-source Jmol.sourceforge.net - PowerPoint PPT PresentationTRANSCRIPT
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Teaching molecular structure using Jmol
Robert M. Hanson
Department of Chemistry, St. Olaf College
Northfield, MN 55057
August 19, 2009
238th ACS National Meeting
Washington, DC
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The Jmol Project
• Jmol molecular visualization project• Open-source• Jmol.sourceforge.net• Active user/developer community
about 400 “users”
about 150 “developers”
collectively 23,000 list messages
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The Jmol Community
• Professional graphics designers• Professional developers• Professors, graduate students, undergraduates
![Page 4: Teaching molecular structure using Jmol](https://reader035.vdocuments.mx/reader035/viewer/2022062315/56814dce550346895dbb2910/html5/thumbnails/4.jpg)
The Jmol Community
• Generally one of three focal points:
– Research– Publishing– Education
![Page 5: Teaching molecular structure using Jmol](https://reader035.vdocuments.mx/reader035/viewer/2022062315/56814dce550346895dbb2910/html5/thumbnails/5.jpg)
The Jmol Community
• Generally one of three focal points:
– Research• Computational chemistry visualization• Structural biology• Electron microscopy/X-ray crystallography
– Publishing– Education
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JR Schmidt, U. Wisconsin “WebMO” http://www.webmo.net/
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Peter Rose, RCSB http://www.rcsb.org/pdb/explore/jmol.do?structureId=1LDN
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Peter Rose, RCSB http://www.rcsb.org/pdb/explore/jmol.do?structureId=1LDN
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Patrick Carroll, U. Penn. http://macxray.chem.upenn.edu/
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The Jmol Community
• Generally one of three focal points:
– Research– Publishing
• Interactive website content• Professional graphics design• Database front ends
– Education
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Frieda Reichsman, http://pubs.acs.org/doi/media/10.1021/cb600303y/figure2.htm
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Tim Driscoll MolVis http://molvis.sdsc.edu/fgij/fg.htm?mol=1ldn
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Alan Hewat, http://icsd.fiz-karlsruhe.de/icsd/
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Alan Hewat, http://icsd.fiz-karlsruhe.de/icsd/
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The Jmol Community
• Generally one of three focal points:
– Research– Publishing– Education
• High School• General chemistry• Organic chemistry• Biochemistry• Inorganic chemistry• Computational chemistry
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The Molecular Workbench
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The Molecular Workbench
Charles Xie, Concord Consortium http://mw.concord.org/modeler/
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Molecular Symmetry
Dean Johnston, Otterbein College, http://symmetry.otterbein.edu/
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Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm
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Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm
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Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm
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Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm
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CoolMolecules
Bob Hanson, http://www.stolaf.edu/depts/chemistry/mo/struc/explore.htm
Mike McGuan Melanie Casavant
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