structural insights into sgc

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BioMed Central Page 1 of 1 (page number not for citation purposes) BMC Pharmacology Open Access Oral presentation Structural insights into sGC Xiaolei Ma 1 , Nazish Sayed 2 , Annie Beuve 2 and Focco van den Akker* 1 Address: 1 Case Western Reserve University, Cleveland, USA and 2 UMDNJ New Jersey Medical School, Newark, USA Email: Focco van den Akker* - [email protected] * Corresponding author The soluble guanylyl cyclase (sGC) is the main receptor for nitric oxide (NO). Upon NO binding, sGC undergoes a conformational change leading to the 200-fold stimula- tion of the production of the second messenger cGMP. sGC is a heterodimeric α/β protein with the NO sensory domain located on the N-terminus of the β-subunit, the H-NOX domain. Carbon monoxide (CO) can also acti- vate sGC although only about 4-fold and CO has also a much lower affinity compared to NO. The coordination state of NO and CO activated sGC is also different. These intriguing differences in sGC are not well understood and we have therefore set out to crystallize a homologous bac- terial H-NOX domain from Nostoc sp for X-ray crystallo- graphic studies. Its ~35% sequence identity with sGC suggests that Ns H-NOX is a good model for sGC. The crystal structure of this Ns H-NOX domain [1] in the pres- ence and absence of these diatomic ligands reveals that, prior to ligand binding, Ns H-NOX is in the 5-coordinated state with H105 as its proximal ligand (Fig. 1). Upon soaking NO or CO into the Ns H-NOX crystals, both lig- ands were found to bind to the distal face of the heme leading to the formation of the 6-coordinated state; CO binds in a more perpendicular fashion compared to NO. The heme moiety was found to pivot upon ligand binding with the CO ligand displaying a larger pivot compared to NO. These steric hindrance-relieving pivot motions are attributed to residue W74 (F74 in sGC) which is postu- lated to serve as a molecular ruler to dampen the affinity for CO. Structure-guided mutagenesis experiments aided in proposing that full activation of sGC in the 5-coordi- nated NO-bound state involves concomitant heme bend- ing and N-terminal subdomain shift within the H-NOX domain. References 1. Ma X, Sayed N, Beuve A, van den Akker F: NO and CO differen- tially activate soluble guanylyl cyclase via a heme pivot-bend mechanism. EMBO J 2007, 26:578-588. from 3 rd International Conference on cGMP Generators, Effectors and Therapeutic Implications Dresden, Germany. 15–17 June 2007 Published: 25 July 2007 BMC Pharmacology 2007, 7(Suppl 1):S37 doi:10.1186/1471-2210-7-S1-S37 <supplement> <title> <p>3<sup>rd </sup>International Conference on cGMP Generators, Effectors and Therapeutic Implications</p> </title> <note>Meeting abstracts – A single PDF containing all abstracts in this Supplement is available <a href="http://www.biomedcentral.com/content/files/pdf/1471-2210-7-S1-full.pdf">here</a>.</note> </supplement> This abstract is available from: http://www.biomedcentral.com/1471-2210/7/S1/S37 © 2007 Ma et al; licensee BioMed Central Ltd. Close-up view of heme pocking in the free Ns H-NOX struc- ture Figure 1 Close-up view of heme pocking in the free Ns H-NOX struc- ture. The heme (blue), N-terminal subdomain (red), and key residues proximal to the heme are depicted.

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Page 1: Structural insights into sGC

BioMed Central

Page 1 of 1(page number not for citation purposes)

BMC Pharmacology

Open AccessOral presentationStructural insights into sGCXiaolei Ma1, Nazish Sayed2, Annie Beuve2 and Focco van den Akker*1

Address: 1Case Western Reserve University, Cleveland, USA and 2UMDNJ New Jersey Medical School, Newark, USA

Email: Focco van den Akker* - [email protected]

* Corresponding author

The soluble guanylyl cyclase (sGC) is the main receptorfor nitric oxide (NO). Upon NO binding, sGC undergoesa conformational change leading to the 200-fold stimula-tion of the production of the second messenger cGMP.sGC is a heterodimeric α/β protein with the NO sensorydomain located on the N-terminus of the β-subunit, theH-NOX domain. Carbon monoxide (CO) can also acti-vate sGC although only about 4-fold and CO has also a

much lower affinity compared to NO. The coordinationstate of NO and CO activated sGC is also different. Theseintriguing differences in sGC are not well understood andwe have therefore set out to crystallize a homologous bac-terial H-NOX domain from Nostoc sp for X-ray crystallo-graphic studies. Its ~35% sequence identity with sGCsuggests that Ns H-NOX is a good model for sGC. Thecrystal structure of this Ns H-NOX domain [1] in the pres-ence and absence of these diatomic ligands reveals that,prior to ligand binding, Ns H-NOX is in the 5-coordinatedstate with H105 as its proximal ligand (Fig. 1). Uponsoaking NO or CO into the Ns H-NOX crystals, both lig-ands were found to bind to the distal face of the hemeleading to the formation of the 6-coordinated state; CObinds in a more perpendicular fashion compared to NO.The heme moiety was found to pivot upon ligand bindingwith the CO ligand displaying a larger pivot compared toNO. These steric hindrance-relieving pivot motions areattributed to residue W74 (F74 in sGC) which is postu-lated to serve as a molecular ruler to dampen the affinityfor CO. Structure-guided mutagenesis experiments aidedin proposing that full activation of sGC in the 5-coordi-nated NO-bound state involves concomitant heme bend-ing and N-terminal subdomain shift within the H-NOXdomain.

References1. Ma X, Sayed N, Beuve A, van den Akker F: NO and CO differen-

tially activate soluble guanylyl cyclase via a heme pivot-bendmechanism. EMBO J 2007, 26:578-588.

from 3rd International Conference on cGMP Generators, Effectors and Therapeutic ImplicationsDresden, Germany. 15–17 June 2007

Published: 25 July 2007

BMC Pharmacology 2007, 7(Suppl 1):S37 doi:10.1186/1471-2210-7-S1-S37

<supplement> <title> <p>3<sup>rd </sup>International Conference on cGMP Generators, Effectors and Therapeutic Implications</p> </title> <note>Meeting abstracts – A single PDF containing all abstracts in this Supplement is available <a href="http://www.biomedcentral.com/content/files/pdf/1471-2210-7-S1-full.pdf">here</a>.</note> </supplement>

This abstract is available from: http://www.biomedcentral.com/1471-2210/7/S1/S37

© 2007 Ma et al; licensee BioMed Central Ltd.

Close-up view of heme pocking in the free Ns H-NOX struc-tureFigure 1Close-up view of heme pocking in the free Ns H-NOX struc-ture. The heme (blue), N-terminal subdomain (red), and key residues proximal to the heme are depicted.