strategies for complex mixture analysis in broadband microwave spectroscopy amanda l. steber, justin...
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Strategies for Complex Mixture Strategies for Complex Mixture Analysis in Broadband Microwave Analysis in Broadband Microwave SpectroscopySpectroscopy
Amanda L. Steber, Justin L. Neill, Matt T. Muckle, and Brooks H. PateDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904
D.F. PlusquellicBiophysics Group, Physics Laboratory, NIST, Gaithersburg, MD 20899-8441
V. Lattanzi, S. Spezzano, and M.C. McCarthyHarvard-Smithsonian Center for Astrophysics, 60 Garden St., Cambridge, MA 02138, and School of Engineering and Applied Sciences, Harvard University, 29 Oxford St., Cambridge, MA 02138
Broadband SpectraBroadband SpectraDense spectra
◦Parent species◦Isotopologues◦Multiple conformers◦Clusters◦Contaminants
Many lines at the same intensityValuable information (substitution
structures and clusters)
Extracting Overlapping Extracting Overlapping SpectraSpectra
Difficulty in assigning species by pattern matching
Solution: Broadband MW-MW Solution: Broadband MW-MW Double ResonanceDouble Resonance
Masakazu Nakajima, Yoshihiro Sumiyoshi, and Yasuki Endo, Rev. Sci. Instrum. 73, 165 (2002), DOI:10.1063/1.1426230
Formic Acid TrimerFormic Acid Trimer
7000 8000 9000 10000 11000 12000 13000 14000 15000-50
0
50
100P
erce
nt M
odu
latio
n
Frequency (MHz)
919 -818 9286.7374928 -919 9491.729710010 -919 9598.4936 919 -808 10364.770911011 -10110 10760.784110110 -909 11180.830011111 -10110 11312.2940
Monitored 10110 -919 10301.3515
Kevin O. Douglass made the initial assignment of formic acid trimer.
Too many averages needed to see weak species
Takes a significant amount of time ~50 hours
How do we get around this problem?
Problems/ Weaknesses Problems/ Weaknesses
Tunneling doubletNeeded to find c-type
transitionsShifted due to tunneling
of the water
Formic Acid Trimer and Formic Acid Trimer and WaterWater
Monitored 643-532 transition at 11766.7552 MHz and scanned up from 9000 MHz to find the 532-422
Found the shift to be ~180 MHz from predicted frequency
Then assigned c-types in the broadband
C D
Search for 532-422 transition for Lower State
Search for 532-422 transition for Upper State
Formic Acid Trimer and Formic Acid Trimer and WaterWater
Autofitting program developed in conjunction with D. Plusquellic
Based on the success of electronic structure theory and high frequency precision of microwave spectroscopy
Used to determine if there is a candidate structure present◦Quick approach
Automatic Spectra Automatic Spectra ExtractionExtraction
HexanalHexanal*11 conformers and 12 13C
assignments have been removedTotal of 918 lines have been cut
*The assignment of these conformers as well as the ab initio calculations were done by R.D. Suenram, A. Lesarri, S.T. Shipman, G.G. Brown, L.-H. Xu, and B.H. Pate. This work has not yet been published.
Autofitting Program Autofitting Program ProcedureProcedure24 other possible conformational
structures for 1-hexanalPick the next lowest energy
structureInput ab initio rotational constantsProgram generates a predicted
spectrumPick three transitions to make the
triplet lists, as well as set frequency window and intensity threshold
6000 8000 10000 12000 14000 16000 18000 20000-0.005
0.000
0.005
0.010
0.015
0.020
0.025
0.030
0.035
0.040
0.045
0.050
0.055
0.060
0.065
Inte
nsi
ty (
mV
)
Frequency (MHz)
Autofitting Program Autofitting Program ProcedureProcedureHave all possible candidate
assignments from frequency window
Tests triplets and looks for other transitions that hit a line in the spectrum
From a hit we get new rotational constants as well as the frequencies of the lines
Ab initio Autofit Experimental
A (MHz) 5369.19 5382.1385439.258(10
)
B (MHz) 1120.87 1098.7181098.7497(1
7)
C (MHz) 1070.05 1050.3281050.3568(1
7) DJ (kHz) -- -- 0.657(12)DJK (kHz) -- -- 9.24(21)dJ (kHz) -- -- 0.101(10)
Final Fit for Twelfth Final Fit for Twelfth ConformerConformer
29 Lines with a RMS of 20.731 kHz
Lines may be absent because they may have blended with cut lines thus making it hard to determine right triplet
50,000 triplets can be scanned in an hour
Good for isotopomers but with more complex Hamiltonians, computational cost would increase significantly.
Challenges to ProgramChallenges to Program
Dense spectra from reactive chemistry and discharge are hard to assign
Use broadband MW-MW double resonance to analyze the more intense lines, but doesn’t work well with weak species
Can use cavity MW-MW DR to analyze the weak species or species split by tunneling
To help these two techniques and aid in faster assignments, programs are being developed to extract spectra automatically
OverviewOverview