safety, can you paradigm? a statistical lament janet turk wittes statistics collaborative

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Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Page 1: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

Safety, Can You Paradigm?

A Statistical Lament

Janet Turk WittesStatistics Collaborative

Page 2: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Harms identified late

•fenflurmine-phentermine (Fen Phen)

•Rofecoxib (Vioxx)

•Troglitazone (Rezulin)

•HRT (Premarin and PremPro)

•Celecoxib (Celebrex)

•Telithromycin (Ketek)

•Rosiglitazone (Avandia)

•Antidepressants, anti-epileptics….

Page 3: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Could we have identified these harms earlier?

•Troglitazone (Rezulin) -removed from market in 2000

Lots of liver abnormalities

Severe toxicities noted in 1997

Other equally effective drugs didn’t have same problems

Page 4: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Could we have identified these harms earlier?

•Troglitazone (Rezulin) -removed from market in 2000

• Rofecoxib (Vioxx) -removed from market in 2004

Every study showed excess heart attack

Attributed to benefit of naproxen

Page 5: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Could we have identified these harms earlier?

•Troglitazone (Rezulin) – removed from market in 2000

•Rofecoxib (Vioxx) -removed from market in 2004

•HRT (Premarin/PremPro)-major label change 2006

Heart attacks in Puerto Rican girls on oral contraception -1960’s

Men on estrogens had higher event rates – 1970’s

Page 6: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Could we have identified these harms earlier?

•Troglitazone (Rezulin) – removed from market in 2000

•Rofecoxib (Vioxx) -removed from market in 2004

•HRT (Premarin and PremPro)-label change 2006

•Celecoxib (Celebrex) – paper published 2005

•Telithromycin (Ketek) – major label change 2007

Page 7: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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“CELEBRATE :: CELEBREX”

December 2004

Page 8: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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How we statisticians help to save drugs

•We find safety boring

Page 9: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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For efficacy we think hard about…

Outcomes

Population to study

Protocol

Analysis of primary outcome

Control of Type I error rate

Other outcomes

Missing data

Sensitivity analyses

Page 10: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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How we statisticians save drugs

•Because we find safety boring….

We don’t look at preclinical and early Phase data

We don’t ask about

•Chemistry

•Biology

•What PK/PD studies show

•Safety part of analysis plan is an afterthought

Page 11: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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How the statistical -police protect drugs

•We test hypotheses

•Put events in correct body system

•Give precise definitions

•No data dredging

•Too many type 1 errors if we dredge

Page 12: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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And we divide and…

•conquer

•obfuscate

Page 13: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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e.g. Neuropathy

Event T C

Neuropathic pain 1 0

Neuropathy 1 0

Neuropathy NOS 5 2

Neuropathy peripheral 2 0

… 2 1

Page 14: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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e.g. Neuropathy

Event T C

Parathesia 3 2

Parathesia NOS 4 0

Parathesia other 0 1

Peripheral motor neuropathy 6 0

Peripheral sensory neuropathy 3 2

Page 15: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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True(ish) data from a coxib

C TCardiac disorders 42 46Respiratory 33 29Vascular disorders 7 9

Page 16: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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True(ish) data from a coxib

C TCardiac disorders 42 46•Angina 2 2•Angina aggravated 0 2•Angina unstable 0 3•…•Cardiac arrest 0 1•Cardiac failure congest 2 0•Coronary artery disease 4 7•…•Myocardial infarction 5 10

Page 17: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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True(ish) data from a coxib

Respiratory 33 29•Dyspnea 1 3

Vascular disorders 7 9•Cerebral infarction 0 1

•Pulmonary embolism 0 2

•TIA 2 0

Page 18: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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If you combined…

No. of people with at least one serious thromboembolic event or evidence of heart failure

Placebo Coxib

16 27

Page 19: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Other ways to save drugs

Modified Daley’s Rule:

Censor early and often

Page 20: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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e.g., Rofecoxib- short follow-up

Page 21: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Through 36 months

Page 22: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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With denominators (Bresalier et al. NEJM 2005 352:1092) (And see Adam Boyd’s poster!)

Page 23: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Known or suspected adverse events

•Monitor them

•Look at events, their (near) synonyms, labs

Are they real?

Are they too frequent?

Page 24: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Hierarchical multiplicity

•Think of biology

•Order hierarchy by decreasing

Biological plausibility

Objectivity

•Look for monotone decreasing hazard ratio

Page 25: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Which dose of celecoxib do you want?

Page 26: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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APC Study (Placebo vs high dose)

Outcome n------------------------------------------------CV death  6  +MI   19+Stroke  26+CHF 29+Angina 34+CV procedure 46-----------------------------------------------Other CV 62

Page 27: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Adenoma Prevention with Celecoxib (APC) Study

HRCV death  5.1   +MI   3.8  +Stroke  3.4  +CHF   3.2 +Angina 2.1 +CV procedure 1.7 -------------------------------------------------Other CV 1.1 

Page 28: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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APC Study

CV death  5.1  ( 0.6, 43.2)    +MI   3.8  ( 1.3, 11.4)   +Stroke  3.4  ( 1.4,  8.3)  

+CHF  3.2  ( 1.4,  7.4)  +Angina 2.1  ( 1.0,  4.3)  +CV procedure 1.7  ( 1.0,  3.1) ------------------------------------------Other CV 1.1  ( 0.7,  1.8)

Page 29: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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APC Study

CV death  5.1  ( 0.6, 43.2) 0.14   +MI   3.8  ( 1.3, 11.4)  0.015 +Stroke  3.4  ( 1.4,  8.3)  

0.007+CHF  3.2  ( 1.4,  7.4)  0.006+Angina 2.1  ( 1.0,  4.3)   0.05+CV procedure 1.7  ( 1.0,  3.1) 0.05-------------------------------------------------Other CV 1.1  ( 0.7,  1.8) 0.7

Solomon (2006). Circulation 114:1028

Page 30: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Unknown harms: usual approach

•Respond by

Agonizing

Checking informed consent document

Asking for more frequent looks

Asking for more thorough analyses

•Worry about falsely discovered harm

Page 31: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Sentinel events

•Identify

•Follow in the next patients

•Invent formal statistical methods

Page 32: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Single sentinel event

•Childhood vaccine

•30 day follow-up for serious adverse events

•1 death occurred

•DSMB: did the vaccine cause the death?

Page 33: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Women’s Health Initiative

•Early in the trial, DSMB noted:

Increase in stroke

Increase in pulmonary embolism

Increase in myocardial infarction

•Possible sentinel events

Myocardial infarction

The big meanies: stroke, PE, MI

Page 34: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Proposal

1. Identify sentinel event (or cluster or rate)

2. Monitor for subsequent occurrence(s)

Have reasonable power

Be statistically unbiased (exclude sentinel)

Type 1 error rate may be large (~0.2)

Lachenbruch, Wittes: 2007

Page 35: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Safety report sample –abnormal lab values

•Time A B Total •Point [N= 150] [N= 148] [N= 298] •_______________________________________________________________ SCREENING 0 0 0 •RANDOM 0 0 0 •WEEK 2 0 0 0 •WEEK 3 0 0 0 •WEEK 4 0 0 0 •WEEK 5 0 0 0 •WEEK 6 0 0 0 •WEEK 7 0 0 0 •WEEK 8 0 0 0 •___________________________________________________________________

Page 36: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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But wait! You also get:

• Time A B Total • Point [N= 150] [N= 148] [N= 298] •_______________________________________________________________• SCREENING 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • RANDOM 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 2 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 3 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 4 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 5 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 6 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 7 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 8 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) •_______________________________________________________________

Page 37: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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And 150 pages of where’s Waldo

• Time A B Total • Point [N= 150] [N= 148] [N= 298] •_______________________________________________________________• SCREENING 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • RANDOM 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 2 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 3 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 4 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 5 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 6 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 7 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • WEEK 8 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) • EARLY TERM 0 (0.00 %) 0 (0.00 %) 0 (0.00 %)UNSCHEDULED 0 (0.00 %) 0 (0.00 %) 0 (0.00 %) •_______________________________________________________________

Page 38: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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And if this isn’t enough…

•Change from baseline where missing is counted as zero (change in HR=64????)

•Values out of temporal order

•Lots and lots of decimal places

•P-values to 3 and 4 significant digits

•Etc., etc. etc.

Page 39: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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We need to change our habits

•Current statistical approach

One variable at a time

Template applied to all studies

No wonder the docs don’t ask us to work with them!

•Simple change in attitude

Safety parameters aren’t separable

Focus first from biological insights and previous hints

Then scan the other variables

Then refocus

Page 40: Safety, Can You Paradigm? A Statistical Lament Janet Turk Wittes Statistics Collaborative

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Conclusions

•Worry about multiplicity, but not too much

Listen to Joe Heyse’s talk this afternoon

•Beware the censor-happy protocol and analysis

•Don’t be too much the statistician

•But don’t forget randomness