Upload File

relevant kegg pathways additional file 2 te pas et al. the file shows more kegg pathways as found by...

  • Home
  • Documents
  • Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database
49
Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the databas

Upload: morris-webster

Post on 21-Jan-2016

215 views

Category:

Documents


0 download

Report

Tags:

TRANSCRIPT

Page 1: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Relevant KEGG pathwaysAdditional file 2

Te Pas et al.

The file shows more KEGG pathways as found by the PERL script search of the database

Page 2: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

ABC transporters

Page 3: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Alanine and Aspartate metabolism

Page 4: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Androgen and Estrogen metabolism

Page 5: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Arginine and Proline metabolism

Page 6: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

ATP synthesis

Page 7: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Axon guidance

Page 8: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Transcription factors

Page 9: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Benzoate degradation via CoA ligation

Page 10: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Bile acid biosynthesis

Page 11: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Biosynthesis of steroids

Page 12: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Calcium signaling pathway

Page 13: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Carbon fixation in Photosynthetic organisms

Page 14: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Cell junction

Page 15: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Cell cycle

Page 16: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Citrate cycle (TCA cycle)

Page 17: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Cytokine-cytokine receptor interaction

Page 18: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Dorso-ventral axis formation

Page 19: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

ECM-receptor interaction

Page 20: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Fatty acid metabolism

Page 21: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Focal adhesion

Page 22: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Fructose and Mannose metabolism

Page 23: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Glutamate metabolism

Page 24: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Glutathione metabolism

Page 25: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Glycerolipid metabolism

Page 26: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Glycolysis / Gluconeogenesis

Page 27: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Glycophingolipid metabolism

Page 28: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Hedgehog signaling

Page 29: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Inositol phosphate metabolism

Page 30: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

JAK-STAT signaling

Page 31: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

MAPK signaling

Page 32: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Neuroactive ligand-receptor interaction

Page 33: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Notch signaling

Page 34: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Oxydative phosphorylation

Page 35: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Pentose and Glucuronate interconversions

Page 36: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Porphyrin and chlorophyl metabolism

Page 37: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Proteasome

Page 38: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Purine metabolism

Page 39: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Pyruvate metabolism

Page 40: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Regulation of actin cytoskeleton

Page 41: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Ribosome

Page 42: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Starch and Sucrose metabolism

Page 43: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

TGF-beta signaling

Page 44: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Tight junction

Page 45: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Two-component system

Page 46: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Tyrosine metabolism

Page 47: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Ubiquitin mediated proteolysis

Page 48: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

Urea cycle and metabolism of amino groups

Page 49: Relevant KEGG pathways Additional file 2 Te Pas et al. The file shows more KEGG pathways as found by the PERL script search of the database

WNT signaling


Relevant KEGG pathways Additional file 2

+Model ARTICLE IN PRESS · +Model ARTICLE IN PRESS 4 Jiang X et al. Table 1 The enriched GO functions and KEGG pathways for the up-regulated and the down-regulated genes. (A) The

Introduction to KEGG - Home | Metabolomics - The …metabolomics.se/sites/default/files/courses_files/KEGG.pdf · Introduction to KEGG Susumu Goto, ... E. coli B. subtilis S. cerevisiae

Pathway Assignments. The assignment – Annotating Pathways KEGG Pathway Database

Kegg Pipe Organ Builders 2014 Cover Feature.pdfrosewood keys invite you to play and all accessories are placed where they are ... —Kegg Pipe Organ Builders Charles Kegg, President

Large-Scale Metabolic Network Alignment: MetaCyc and KEGG

Hepatic transcriptome profile of sheep (Ovis aries) in ...KEGG pathway analysis identified two highly enriched pathways, namely, the peroxisome proliferator-activated receptor (PPAR)

BioRuby and the KEGG API

BioRuby + KEGG API + KEGG DAS = wiring knowledge for genome and pathway Toshiaki Katayama Human Genome Center, University of Tokyo, Japan

ResponseofGastricEpithelialProgenitorsto Helicobacter ... · KEGG pathways between different gene sets (i.e. core versus variable genes) were done using a 2 goodness-of-fit test;

Amdex: Automated meta-data extraction from KEGG pathways

Using the KEGG Database Resource UNIT 1 - Metabolomics

Is my network module preserved and reproducible? · 2011. 3. 24. · chimp brain (test) gene expression data. Preservation of KEGG pathways measured using the composite preservation

Energy and metabolism lehninger (Ch 13) biochem5 (Ch14) kegg S. 14.2

Visualizing Metabolic Networks in KEGG - VizBi

Gene Expression Profiling Identifies Downregulation of the ...downloads.hindawi.com/journals/jdr/2017/8103904.pdf · KEGG pathway analysis indicated that DPN and DM share four pathways,

Функции Метаболические пути KEGG

PROFESSIONAL PATHWAYS for TEACHERS - Austin ISD · PDF file · 2017-10-24Professional Pathways for Teachers Professional Pathways for ... Education Austin, and American Federation

Ivyspring International Publisher TheranosticsOntology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enrichment analyses were conducted for the parent genes of identified

Enzymatic Function Module (KEGG, MetaCyc, and EC Numbers)

Prediction of Colorectal Cancer Driver Genes from Patients’ … Muhammad-Iqmal... · relevant KEGG pathway as a template in mapping the genes and to visualize the pathways that

Heritability and genomics of gene expression in peripheral ...web.cs.ucla.edu/~weiwang/paper/NATUREGEN14.pdfand numerous Kyoto Encyclopedia of Genes and Genomes (KEGG) and GO pathways

Motifs, Modules and Pathwaysbiofold.org/pages/courses/2019/docs/6-NetworkMotifs.pdf · 2019-12-02 · KGML Format The KEGG Markup Language (KGML) is an exchange format of the KEGG

Differential gene expression and functional pathway ...One of these affected pathways, is the “Activation of Rac” pathway (Fig. 2C). Mapping relative expression values on the KEGG

Novije spoznaje o mitohondriju i mitohondrijskim bolestimainfo.hazu.hr/upload/File/2018-3/HAZU-slaus-pecina-2018.pdf · KEGG Pathway . Velik broj identičnih kopija mtDNA 16.569 pb

An Overview of Graph Data Management and Analysis · Pathway KEGG Glycan KEGG Enzyme KEGG Drug KEGG Com-pound InterPro Homolo Gene HGNC Gene Ontology GeneID Affy-metrix bible ontology

Exposure to maternal obesity alters gene expression in the ... · pathways represented within the DEG list. KEGG pathway analysis identified DEGs involved in the PI3K-AKT signaling

DOTHAN TECHNOLOGY CENTER Career Pathways*dothan.ss12.sharpschool.com/UserFiles/Servers/Server_55533/File/… · Technology CenterTechnology Center , through Career Pathways turn into

Pathway analysis with Metaboanalystand KEGG · 7/21/2018 1 Pathway analysis with Metaboanalystand KEGG Stephen Barnes, PhD Professor of Pharmacology & Toxicology [email protected] Files

Frontier Research: Creating Pathways to Sustainability › sites › default › files › document › file › ... · 2019-11-21 · 2 - Frontier Research: Creating Pathways to

Original Article Prospective target genes and pathways of ... · PDF file(Agilent Technologies, Palo Alto, CA, USA ... we chose the gene ontology and KEGG pathway as the functional

Kegg database resources

Analysis of the transcriptome of Marsdenia tenacissima discovers … · 2014. 10. 16. · OOF 167 2.5. Functional classification by KEGG 168 To identify active biological pathways

Converting the KEGG Pathway Database to SBMLsbml.org/images/b/bd/Kegg2sbmlICSB2004.pdf · As a first attempt at writing translation tools, we have decided to convert the KEGG (Kyoto

Emanuel Teixeira Nº24924 Bioengenharia KEGG Bioinformática 2011-2012