references (1995). 43 31 -...

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References Acuna-Arguelles, M.E., Gutierrez-Rojas, M., Viniegra-González, G and Favela- Torres, E. (1995). Production and properties of three pectinolytic activities produced by Aspergillus niger in submerged and solid-state fermentation. Appl. Microbiol. Biotechnol., 43: 808–814. Agate, A. D., Bilimoria, M.H and Bhat, J.V. (1962). Pectin transeliminase activity in Streptomyces viridochromogenes. curr. sci., 31: 462-463. Agrios, G.N. (1988). How pathogens attack plants. Ch.3 In: Plant pathology 3rd ed., Academic Press, Inc., San Diego, C.A. pp. 63-86. Ahlawat, S., Battan, B., Dhiman, S.S., Sharma, J and Mandhan, R.P. (2007). Production of thermostable pectinase and xylanase for their potential application in bleaching of kraft pulp. J. Ind. Microbiol. Biotechnol., 34: 763-770. Ahmad, R., Ahmad, S., Igbal, J and Baig, M.A. (1997). Shake flask studies for preliminaries by Aspergillus foetidus. Pak. J. Sci. Res., 49: 36-39. Albersheim, P and Killias, T. (1963). Histochemical localization at the electron microscope level. Am. J. Bot., 50:102–109. Alkorta, I., Garbisu, C., Llama, M.J and Serra, J.L. (1998). Industrial applications of pectic enzymes—a review. Process Biochem., 33: 21–28. Alphons, G. J., Voragen Æ Gerd-Jan Coenen Æ Rene, P., Verhoef Æ Henk A. Schols. (2009). “Review article”: Pectin, a versatile polysaccharide present in plant cell walls”. Struct. Chem. 20: 263–275.

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References

Acuna-Arguelles, M.E., Gutierrez-Rojas, M., Viniegra-González, G and Favela-

Torres, E. (1995). Production and properties of three pectinolytic activities

produced by Aspergillus niger in submerged and solid-state fermentation. Appl.

Microbiol. Biotechnol., 43: 808–814.

Agate, A. D., Bilimoria, M.H and Bhat, J.V. (1962). Pectin transeliminase activity

in Streptomyces viridochromogenes. curr. sci., 31: 462-463.

Agrios, G.N. (1988). How pathogens attack plants. Ch.3 In: Plant pathology 3rd

ed., Academic Press, Inc., San Diego, C.A. pp. 63-86.

Ahlawat, S., Battan, B., Dhiman, S.S., Sharma, J and Mandhan, R.P. (2007).

Production of thermostable pectinase and xylanase for their potential application

in bleaching of kraft pulp. J. Ind. Microbiol. Biotechnol., 34: 763-770.

Ahmad, R., Ahmad, S., Igbal, J and Baig, M.A. (1997). Shake flask studies for

preliminaries by Aspergillus foetidus. Pak. J. Sci. Res., 49: 36-39.

Albersheim, P and Killias, T. (1963). Histochemical localization at the electron

microscope level. Am. J. Bot., 50:102–109.

Alkorta, I., Garbisu, C., Llama, M.J and Serra, J.L. (1998). Industrial applications

of pectic enzymes—a review. Process Biochem., 33: 21–28.

Alphons, G. J., Voragen Æ Gerd-Jan Coenen Æ Rene, P., Verhoef Æ Henk A.

Schols. (2009). “Review article”: Pectin, a versatile polysaccharide present in

plant cell walls”. Struct. Chem. 20: 263–275.

Amorim, H.V and Amorim, V.L. (1977). Coffee enzyme and coffee quality. In:

Enzymes in food and beverage processing, R.L. Ori and A.J. st Angelo, (Eds.),

pp. 27-56, American Chemical Society, ISBN: 084120375X, Indiana, USA. and

characterization of psychrophylic yeasts producing cold-adapted pectinolytic

enzymes. Letters in Applied Microbiology. 38: 383-387.

Aparna Sharma and Gupta, M.N. (2001). Purification of pectinases by three-

phase partitioning. Biotechnology Letters. 23: 1625-1627.

Ariffin, H., Abdullah, N., Umi Kalsom, M.S., Shirai, Y and Hassan, M.A. (2006).

Production and characterisation of cellulase by Bacillus Pumilus Eb3.

International Journal of Engineering and Technology. 3: 47-53.

Apweiler, Rolf., Bairoch, Amos., Cathy, H., Wu, Winona., Barker, C., Boeckmann,

Brigitte., Ferro, Serenella., Gasteiger, Elisabeth., Huang, Hongzhan.,Lopez,

Rodrigo., Magrane, Michele., Maria J. Martin., Darren A., Natale,Claire

O’Donovan., Nicole Redaschi and Lai-Su L. Yeh. (2004). UniProt: theUniversal

Protein knowledgebase. Nucleic Acids Research. 32: D115-D119.

Arpita Dey, Moumita Karmakar and Rina Rani Ray. (2011). Extracellular

Thermostable Polygalacturonase from Bacillus sp. AD 1. Scholars Research

Library. Der Pharmacia Lettre. 3: 2, 358-367.

Arun K. Ray., Abhinanda Bairag., Keka Sarkar Ghosh and Sukanta, Sen, K.

(2007). Optimization of fermentation conditions for cellulase production by

Bacillus subtilis cy5 and Bacillus circulans tp3 isolated from fish gut. Acta

Ichthyologica Et Piscatoria., 37: 47–53.

Ash, C., Farrow, J.A.E., Wallbanks, S and Collins, M.D. (1991). Phylogenetic

heterogeneity of the genus Bacillus revealed by comparative analysis of small-

subunit-ribosomal RNA sequences. Lett. Appl. Microbiol., 13: (4). 202-206.

Aguilar, G and Huirton, C. (1987). Stimulation of the production of extracellular

pectinolytic activities of Aspergillus sp. by galacturonic acid and glucose addition.

Enzyme Microbial Tecnhol., 9: 690-696.

Aguilar, G and Huirton, C. (1990). Constitutive exo-pectinase produced by

Aspergillus sp. CH-Y-1043 on different carbohydrate sources. Biotechnol. Lett.,

12: 655–660.

Bai, Z.H., Zhang, H.X., Qi, H.Y., X.W. Peng, X.W and Li, B.J. (2004). Pectinase

production by Aspergillus niger using wastewater in solid state fermentation for

eliciting plant disease resistance. Bioresource Technol., 95: 49-52.

Bailey, J.M. (1990). Effect of temperature on polygalacturonase production by

Aspergillus niger. Enzyme Microb. Technol., 12: 622-624.

Bairoch Amos. (2000). Serendipity in bioinformatics, the tribulations of a Swiss

bioinformatician through exciting times. Bioinformatics. 16: 48-64.

Bairoch, A. (2005). Protein variety and functional diversity: Swiss-Prot annotation

in its biological context. Comptes Rendus Biologies. 328: 882- 899.

Bairoch, A., Boeckmann, B., Ferro, S and Gasteiger, E. (2004). Swiss-Prot:

Juggling between evolution and stability. Brief. Bioinform., 5: 39-55.

Bajpai, P. (1999). Application of enzymes in the pulp and paper industry.

Biotechnol. Prog., 15: 147- 157.

Baker, R. A and Wicker, L. (1996). Current and potential application of enzyme

infusion in the food industry. Trends Food Sci. Technol., 7: 279– 284.

Baladhandayutham Suresh and Thangavelu Viruthagiri. (2010). Optimization and

kinectics of pectinase enzyme using Aspergillus niger by solid-state fermentation.

Indian Journal of Science and Technology. 3: 867 - 870.

Baracat, M. C., Valentin, C., Muchovej, J. J and Silva, D. O. (1989). Selection of

pectinolytic fungi for degumming of natural fibers. Biotechnol. Lett., 11: 899-902.

Bashton, M and Chothia C. (2007). The generation of new protein functions by

the combination of domains. Structure. 15: 1-2.

Beg, Q. K., Bhushan, B and Hoondal, G. S. (2000). Production and

characterization of thermostable xylanase and pectinase from Streptomyces sp.

QG-11-3. J. Ind. Microbiol. Biotechnol., 24: 396–402.

Beg, Q.K., Bhushan, B., Kapoor, M and Hoondal, G. S. (2001). Effect of amino

acids on production of xylanase and pectinase from Streptomyces sp. QG-11- 3.

World Journal of Microbiology and Biotechnology. 16: 211–213.

Begelis, R. (1993). Carbohydrates. In: Enzymes in Food Processes, T.

Nagodawithana, G. Reed, S. Taylor (Eds.), Academic Press, London, UK. pp.

121–158.

Bhattacharyya, S. K and Paul, N.B. (1976). Susceptibility of ramie with different

gum contents to microbial damage. Curr. Sci. 45: 417-418.

Biswapriya Das, Ashis Chakraborty, Sagarmoy Ghosh and Kalyan Chakrabarti.

(2011). Studies on the effect of pH and carbon sources on enzyme activities of

some pectinolytic bacteria isolated from jute retting water. Turk. J. Biol., 35: 671-

678.

Blanco, P., Sieiro, C and Villa, T.G. (1999). Production of pectic enzymes in

yeast. FEMS Microbiology Letters. 175: 1–9.

Blunt, M.K. (2000). Cellulases and related enzymes in biotechnology.

Biotechnology Advances. 18: 355-383.

Boccas, F., Roussos, S., Gutierrez, M., Serrano, L and Viniegra, G.G. (1994).

Production of pectinases from coffee pulp in solid-state fermentation system:

Selection of wild fungal isolate of high potency by a simple three steps screening

technique, J. Food Sci. Technol., 31: 22–26.

Boeckmann, B., Blatter, M.C., Famiglietti, L., Hinz, U., Lane, L., Roechert, B and

Bairoch, A. (2005). Protein variety and functional diversity: Swiss-Prot annotation

in its biological context. Comptes Rendus Biologies. 328: 882- 899.

Bohdziewiez, J and Bodzek, M. (1994). Ultrafiltration preparation of pectinolytic

enzymes from citric acid fermentation broth. Proc. Biochem., 29: (2), 99-107.

Brigitte., Ferro, Serenella., Gasteiger, Elisabeth., Huang, Hongzhan.,Lopez,

Bruhlmann, F., Kim, K.S., Zimmerman, W and Fiechter, A. (1994). Pectinolytic

enzymes from actinomycetes for the degumming of ramie bast fibers. Applied

and Environmental Microbiology. 60: 2107–2112.

Buchanan, R. E and Gibbons, N. E. (1974). In: Bergey’s manual of determinative

bacteriology. 8th. ed. Baltimore: Williams & Wilkins. p:1268.

Busse-Valverde, N., Gómez-Plaza, E., López-Roca, J.M., Gil-Muñoz, R and

Bautista-Ortín, A.B. (2011). The extraction of anthocyanins and

proanthocyanidins from grapes to wine during fermentative maceration is

affected by the enological technique. Journal of Agricultural and Food Chemistry.

59: 5450-5455.

Cabeza, M.S., Baca, F.L., Puntes, E.M., Loto, F., Baigori, M.D and Morata, V.I.

(2011). Selection of psychrotolerant microorganisms producing cold-active

pectinases for biotechnological processes at low temperature. Food Technology

and Biotechnology. 49: 187-195.

Caffall, K.H and Mohnen, D. (2009). The structure, function, and biosynthesis of

plant cell wall pectic polysaccharides. Carbohydrate Research. 344: 1879-1900.

Call, H. P., Walter, J and Emeis, C.C. (1985). Maceration activity of an

endopolygalacturonase from Candida macedoniensis. J. Food Biochem., 9: 325-

348.

Cao, J., Zheng, L and Chen, S. (1992). Screening of pectinase producer from

alkalophilic bacteria and study on its potential application in degumming of ramie,

Enzyme and Microbial Technology. 14:1013-1016.

Carmen Sieiro, Belén García-Fraga, Jacobo López-Seijas, Abigaíl, da Silva, F,

Tomás and Villa, G. (2012). Microbial Pectic Enzymes in the Food and Wine

Industry. Food Industrial Processes-Methods and Equipment, Chapter 11th.

ISBN: 978-953-307-905-9.

Carr, J. G. (1985). Tea, coffee and cocoa. Microbiology of fermented food.

Elsevier. 2: 133 -154.

Castilho, L. R., Alves, T. L. M and Medronho, R. A. (1999). Recovery of

pectinolytic enzymes produced by solid state culture of Aspergillus niger.

Process Biochem., 34: 181-186.

Castilho, L. R., Medronho, R. A and Alves, T. L. M. (2000). Production and

extraction of pectinases obtained by solid state fermentation of agro industrial

residues with Aspergillus niger. Bioresour. Technol., 71: 45-50.

Catarina Almeida, Tomáš Brányik, Pedro Moradas-Ferreira and José. (2003).

Teixeira Continuous Production of Pectinase by Immobilized Yeast Cells on

Spent Grains. Journal of Bioscience and Bioengineering. 96: (6). 513-518.

Catia A. C. Miranda and Orlando B. Martins. (2008). Species-level identification

of Bacillus strains isolates from marine sediments by conventional biochemical,

16S rRNA gene sequencing and inter-tRNA gene sequence lengths analysis.

Antonie van Leeuwenhoek. 93: 297–304.

Cen, P and Xin, L. (1999). Production of cellulase by solid state fermentation. In:

Tsao G.T., ed., Recent Progress in Bioconversion of Lignocellulose. Adv.

Biochem. Eng. Biotechnol., Springer. 65: 69-92.

Centis, S., Dumas, B., Fournier, J., Marolda, M and Esquerre-Tugaye, M. T.

(1996). Isolation and sequence analysis of Clpg1, a gene coding for an

endopolygalacturonase of the phytopathogenic fungus Colletotrichum

lindemuthianum. Gene. 170: 125–129.

Centis, S., Guillas, I., Sejalon, N and Esquerre-Tugaye, M.T. (1997). Endo

polygalacturonase gene from Colletotrichum lindemuthianum: cloning of CLPG2

and comparison of its expression to that of CLPG1 during saprophytic and

parasitic growth of the fungus. Mol. Plant. Microbe Interact. 10: 769–75.

Ceponis, M. J and Friedman, B. A. (1959). Pectolytic enzymes of Pseudomonas

marginalis and their effects on lettuce. Phytopathology. 49:141-144.

Chambin, O., Dupuis G., Champion, D., Voilley, A and Pourcelot, Y. (2006).

Colonspecific drug delivery: Influence of solution reticulation properties upon

pectin beads performance. International Journal of Pharmaceutics. 321: 86-93.

Chapin, A.G., Santos, J.V., de la Riva, G.A., Antunes, A., Villa, T.G., Uriarte, E

and Daz, H.G. (2009). Journal of Proteome Research. 8: (4). 2122–2128.

Chawanit Sittidilokratna, Surang Suthirawut, Lerluck Chitradon, Vittaya

Punsuvon, Pilanee Vaithanomsat and Prisnar Siriacha. (2007). Screening of

Pectinase Producing Bacteria and Their Efficiency in Biopulping of Paper

Mulberry Bark. Science Asia. 33: 131-135.

Chellapandi, P and Himanshu, M. Jani. (2008). Production of endoglucanase

bythe native strains of Streptomyces isolates in submerged fermentation. Braz. J.

Microbiol., 39: 1.

Chesson, A. (1980). Maceration in relation to the post-harvest handling and

processing of plant material. J. Appl. Bacteriol., 48:1-45.

Cho, S.W., Lee, S and Shin, W. (2001). The X-ray structure of Aspergillus

aculeatus polygalacturonases and a modeled structure of the polygalacturonase–

octagalacturonate complex. J. Mol. Biol., 314: 863–878.

Codner, R. C. (2001). Pectinolytic and cellulolytic enzymes in the microbial

modification of plant tissues. J. Appl. Bacteriol., 84:147–160.

Collee, J.G., Marmion, B.P., Fraser A.G and Simmons, A. (1996). Medical

Microbiology (Mackie and Mac Carteny). Froteen Edition. Chruchill Livingstone.

Collmer, A and Keen, N.T. (1986). The role of pectic enzymes in plant

pathogenesis. Annu. Rev. Phytopathol., 24: 383-409.

Comitini, F., Gobbi, M., Domizio, P., Romani, C., Lencioni, L., Mannazzu, I and

Ciani, M. (2011). Selected non-Saccharomyces wine yeasts in controlled

multistarter fermentations with Saccharomyces cerevisiae. Food Microbiology.

28: 873-882.

Couto, S.R and Sanromàn, M.A. (2006). Application of solid-state fermentation to

food industry – a review. J. Food Eng., 76: 291-302.

da Silva, E.G., de.Fatima Vorges, M., Medina, C., Piccoli, R.H and Schwan, R.F.

(2005). FEMS Yeast Research., 5: 859-865.

Dalė Pečiulytė. (2007). Isolation of cellulolytic fungi from waste paper gradual

recycling materials. Ekologija. 53: 11–18.

Das Gupta, P.C., Sen, K and Sen, S. K. (1976). Degumming of decorticated

ramie for textile purposes. Cell. Chem. Technol., 10: 285-291.

Dayanand, A and Patil, S.R. (2003). In: Detection of potential fungal isolates for

the production of pectinase from deseeded dried sunflower head.

de Freitas., P.M., Martin, N., Silva, D da Silva, R and Gomes, E. (2006). Brazilian

Journal of Microbiology. 37: 302-306.

De Gregorio, A., Mandalari, G., Arena, N., Nucita, F., Tripodo, M.M and Lo Curto,

R. B. (2002). SCP and crude pectinase production by slurry-state fermentation of

lemon pulps. Bioresour. Technol., 83: 89–94.

De Lorenzo, G., Salvi, G., Degra, L., D’Ovidio, R and Cervone, F. (1987).

Introduction of extracellular polygalacturonases and its mRNA in the

phytopathogenic fungus Fusarium moniliforme. J. Gen. Microbiol., 133: 3365–

3373.

de Vries, R.P and Visser, J. (2001). Microbiology and Molecular Biology

Reviews. 65: 4, 497-552.

Deul, H and Stutz, E. (1958). Pectic substances and pectic enzymes. Advances

in Enzymology. 20: 341–382.

Doelle, H.W., Mitchell, D.A and Rolz, C.E. (1992): Solid Substrate Cultivation.

Elsevier Sci. Publ. ltd., London and New York.

Doran, J. B., Cripe, J., Sutton, M and Foster, B. (2000). Fermentations of pectin

rich biomass with recombinant bacteria to produce fuel ethanol. Applied

Biochemistry and Biotechnology. 84–86:141-152.

du Toit, M., Engelbrecht, L., Lerm, E and Krieger-Weber, S. (2011).

Lactobacillus: the next generation of malolactic fermentation starter cultures-an

overview. Food and Bioprocess Technology. 4: 876-906.

Ducasse, M.A., Williams, P., Canal-Llauveres, R.M., Mazerollest, G., Cheynier, V

and Doco, T. (2011). Effect of macerating enzymes on the oligosaccharide

profiles of Merlot red wines. Journal of Agricultural and Food Chemistry. 59:

6558-6567.

Elagovan Namasivayam, John Ravidar. D., Mariappan,, K., Akil jiji, Mukash

kumar and Richard l. Jayaraj. (2011). Production of Extracellular Pectinase by

Bacillus Cereus Isolated From Market Solid Waste. J. Bioanal Biomed., 3: (3),

70-75.

Elegado, F.B and Fujio, Y. (1994). Purification and some properties of

polygalacturonase from Rhizopus sp. LKN. World Journal of Microbiology and

Biotechnology. 10: 256–259.

El-Sheekh, M., Ismail, A.S., El-Abd, M.A. Hegazy, E.M and El-Diwany, A. (2008).

Effective technological pectinases by Aspergillus carneus NRC1 utilizing the

Egyptian orange juice industry scraps. Inter. Biodeterior. and Biodegrad., 63: 12-

18.

Esquerré-Tugayé, M.T., Boudart, G and Dumas, B. (2000). Cell wall degrading

enzymes, inhibitory proteins, and oligosaccharides participate in the molecular

dialogue between plants and pathogens. Plant Physiol. Biochem., 381:157-163.

Favela-Torres, E., Aguilar, C.N., Contreras-Esquivel, J.C and Viniegra-González,

G. (2005). Pectinases. In: Enzyme Technology, A. Pandey, C. Webb, and C.R.

Soccol. C. Larroche (Eds.), Asiatech Publishers Inc., pp. 265–287.

Favela-Torres, E., Sepulveda, T.V and Viniegra-Gonzalez. (2006). Production of

hydrolytic depolymerising pectinases. Biotechnol., 44: 221- 227.

Fawolea, O.B and Odunfab, S.A. (2003). Some factors an ecting production of

pectic enzymes by Aspergillus niger. Int. Biodeterior. Biodegrad., 52: 223 -227.

Fernandez, M. L., Sun, D. M., Tosca, M.A and McNamara, D. J. (1994). Citrus

pectin and cholesterol interact to regulate hepatic cholesterol homeostasis and

lipoprotein metabolism: a dose-response study in guinea pigs. American Journal

of Clinical Nutrition. 59: 869-878.

Fernández-González, M., Úbeda, J.F., Vasudevan, T.G., Otero, R.R.C and

Briones, A.I. (2004). Evaluation of polygalacturonase activity in Saccharomyces

cerevisiae wine strains. FEMS Microbiology Letters. 237: 261-267.

Fonseca, M. J. V., Spadaro, A. C. C and Said, S. (1991). Separation of the

components of the pecteolytic complex produced by Tubercularia vulgaris in solid

state culture. Biotechnol. Lett., 13: 39-42.

Friedrich, J., Cimerman, A and Steiner, W. (1989). Submerged production

pectinase enzymes Aspergillus niger. Effect of different aeration/ agitation

regimes. Appl. Microbiol. Biotechnol., 31: 490-494.

Friedrich, J., Cimerman, A and Steiner, W. (1992). Production of pectolytic

enzymes by Aspergillus niger on sucroce. Food Biotechnol., 6: 207-216.

Gailing, M.F., Guibert, A and Combes, D. (2000). Fractional factorial designs

applied to enzymatic sugar beet pulps pressing improvement. Bioprocess Eng.,

22: 69–74.

Gainvors, A., Nedjaoum, N., Gognies, S., Muzart, M., Nedjma, M and Belarbi, A.

(2000). Purification and characterization of acidic endo-polygalacturonase

encoded by the PGL-1 gene from Saccharomyces cerevisiae. FEMS Microbiol.

Lett., 183: 131–135.

Galiotou-Panayotou, M., Kapantai, M and Kalantzi, O. (1997). “Growth conditions

of Aspergillus sp. ATHUM-3482 for polygalacturonase production,” Applied

Microbiology and Biotechnology. 47: (4). 425–429.

Gao, S., Choi, G.H., Shain, L and Nuss, D.L. (1996). Cloning and targeted

disruption of Enpg-1, encoding the major in vitro extracellular

endopolygalacturonase of the chestnut blight fungus, Cryphoneciria parasitica.

Appl. Environ. Microbiol., 62: 1984-1990.

Gasteiger, E., Gattiker, A., Hoogland, C., Ivanyi, I., Appel, R.D and Bairoch, A.

(2003). ExPASy: the proteomics server for in-depth protein knowledge and

analysis. Nucleic Acids Res., 31: 3784-3788.

Gasteiger, E., Hoogland, C., Gattiker, A., Duvaud, S., Wilkins, M.R., Appel R.D

and Bairoch, A. (2005). Protein Identification and Analysis Tools on the ExPASy

Server;(In) John M. Walker (ed): The Proteomics Protocols Handbook, Humana

Press.pp. 571-607.

Gayathri Sathiyaraj, Sathiyaraj Srinivasan, Ho-Bin Kim, Sathiyamoorthy

Subramaniyam, Ok Ran Lee, Yeon-Ju Kim, Deok Chun Yang. (2011). Screening

and Optimization of Pectin lyase and Polygalacturonase activity from ginseng

pathogen Cylindrocarpon destructans. Brazilian Journal of Microbiology. 42: 794-

806.

Gee, M., Reeve, R. M and McCready, R. M. (1959). Reaction of hydroxylamine

with pectinic acids. Chemical studies and histochemical estimation of the degree

of esterification of pectic substances in fruit. J. Agric. Food Chem. 7: 34–39.

Gervais, P., Molin, P., Grajek, W and Bensoussan, M. (1988). Influence of the

water activity of a solid substrate on the growth rate and sporogenesis of

filamentous fungi. Biotechnol. Bioeng., 31: 457-463.

Gholifar, E., Asadi, A., Akbari, M and Atashi, M.P. (2010). Effective factors in

agricultural apple waste in Isalamic Republic of Iran: A comparative study. J.

Hum. Ecol., 32: 47-53.

Gillespie, A. M., Keane, D., Griffin, T. 0., Tuohy, M. G., Donaghy, J., Haylock, R.

W and Coughlan, M. P. (1990). The application of fungal enzymes in flax retting

and the properties of an extracellular polygalacturonase from Penicillium

capsulatumn, p. 211-219. In Kirk, T. K and Chang, H. M. (ed.), Biotechnology in

pulp and paper manufacture. Butterworth-Heinemann, Stoneham, Mass.

Girdhari Lal Siddappa, G.S and Tandon, G.L. (1998). Manufacture of pectin.

Preservation of fruits and vegetables, Indian Council of Agriculture Research,

New Delhi. 265-272.

Gómez-Plaza, E., Gil-Muñoz, R., López-Roca, J.M and Martínez, A. (2000).

Colour and phenolic compounds of a young red wine, influence of wine-making

techniques, storage temperature, and length of storage time. Journal of

Agricultural and Food Chemistry, 48: 736-741.

Goodman, R.N., Kiraly, Z and Wood, K.R. (1986). Cell wall composition and

metabolism. Ch.4 In: The Biochem. and Physiol. of Plant Disease, Univ. of

Missouri Press, Columbia. pp.105-149.

Goto, K., Omura, T., Hara, Y and Sadale, Y. (2000). “Application of partial 16S

rDNA sequence as an index for rapid identification of species in the genus

Bacillus,” J. Gen. Appl. Microbiol., 46: 1-8.

Griffin, D. H. (1994). Fungal physiology. 2nd. ed. New York: Wiley-liss, p. 458.

Gummadi, S.N and Panda, T. (2002). Purification and biochemical properties of

microbial pectinases: a review-Process Biochem., 38: 987-996.

Gummadi, S.N and Panda, T. (2003). Purification and biochemical properties of

microbial pectinases – A review, Process Biochem., 38: 987–996.

Gummadi, S.N and Kumar, D.S. (2005). Microbial pectic transeliminases.

Biotechnol Lett., 27: 451-458.

Gurucharanam, K., Deshpande, K. S. (1986). Polysaccharases of Curvularia

lunata-use in degumming of remine fibers. Indian phytopathol., 3: 385-389.

Haidar, A.I and Fazaelipoor, M.H. (2010). Pectinase Production in a Defined

Medium Using Surface Culture Fermentation. Int. J. Ind. Chem. 1: (1). 5-10.

Hall, T.A (1999). BioEdit: a user-friendly biological sequence alignment editor

and analysis program for Windows 95/98/NT. Nucl.Acids.Symp.Ser., 41: 95-98.

Hayrunnisa Nadaroğlu, Esen Taşkin, Ahmet adigüzel, Medine Güllüce, Nazan

Demir. (2010). Production of a Novel Pectin Lyase from Bacillus pumilus (P9),

Purification and Characterisation and Fruit Juice Application. Romanian

Biotechnological Letters. 2: (15).

Henriksson, G., Akin, D. E and Slomezynski, D. (1999). Production of highly

efficient enzyme for flax retting by Rhizomucor pusillus. J. Biotechnol., 68:115-

123.

Hoagland, P.D and Parris, N. (1996). Chitosan/pectin laminated films. Journal of

Agricultural and Food Chemistry. 44:1915-1919.

Holding, A.J and Colle, J.G. (1971). In: Methods in Microbiology, (Norrs JR,

Ribbons Eds). DW Acadamic press, London. 64:1-32.

Hoondal, G. S., Tiwari, R. P., Tewari, R., Dahiya, N and Beg, Q. K. (2000).

Microbial alkaline pectinases and their industrial applications: a review, Applied

Microbiology and Biotecnology. 59: 409-418.

Horikoshi, K. (1990). Enzymes from alkalophiles. In: Fogarty WM, Kelly CT (eds.)

Microbial enzymes and biotechnology. 2nd edn. Elsevier. Ireland. 275-295.

Hours, R.A., Voget, C.E and Ertola, R.J. (1988). Apple pomace as raw material

for the pectinases production in solid-state culture. Biol. Wastes. 24: 147–157.

http://www.biochem.ucl.ac.uk/bsm/pdsum

http://www.cazy.org

http://www.mbio.ncsu.edu/BioEdit/BioEdit.html

Huang, L. K and Mahoney, R. R. (1999). Purification and characterization of an

endo-polygalacturonase from Verticillum albo-atrum. Journal of Applied

Microbiology. 86:145–146.

Huang, Q and Allen, C. (1997). An exo-poly-a-D-galacturonosidase, Peh B, is

required for wild type virulence of Ralstonia solanacearum. J. Bacteriol., 179:

7369–7378.

Hutchinson and Thornton (1996). PROMOTIF-a program to identify and analyse

structural motifs in proteins. Protein Science. 5: (2), 212-220.

Hutnan, M., Drtil, M and Mrafkova, L. (2000). Anaerobic biodegradation of sugar

beet pulp. Biodegradation. 11: 203-211.

Ibrahim, A.S.S and El-diwany, A.I. (2007). Isolation and Identification of New

cellulases producing thermophilic bacteria from an egyptian hot spring and some

properties of the crude enzyme. Australian Journal of Basic and Applied

Sciences. 1: 473-478.

Iconomou, D., Arapoglou, D and Israilides, C. (2010). Improvement of phenolic

antioxidants and quality characteristics of virgin olive oil with the addition of

enzymes and nitrogen during olive paste processing. Grasasy Aceites, 61: 303-

3011.

Jacob, N. Asha Poorna, C and Prema, P. (2008). Purification and partial

characterization of polygalacturonase from Streptomyces lydicus. Bioresource

Technol., 99: 6697-670.

Janani, L., Karthik, Gaurav Kumar, K.V and Bhaskara Rao. (2011). Screening of

Pectinase Producing Microorganisms from Agricultural Waste Dump Soil. Asian

Journal of Biochemical and Pharmaceutical Research. 1: (2). 329-337.

Jansen, E.F and MacDonnell, L.R. (1945). Influence of methoxyl content of pectic

substances on the action of polygalacturonase, Arch. Biochem., 8: 97–112.

Jayani, R.S., Saxena, S and Gupta, R. (2005). Microbial pectinolytic enzymes: A

review. Process Biochem., 40: (9). 2931-2944.

Jayani, R.S., Shukla, S.K and Gupta, R. (2010). Enzyme Research.

Jose, M., Rodriguez-Nogales., Natividad Ortega., Manuel Perez-Mateos and

Marı´a, D. Busto. (2008). Pectin hydrolysis in a free enzyme membrane reactor:

An approach to the wine and juice clarification. Food Chem., 107: 112–119.

Kapoor, M and Kuhad, R.C. (2002). “Improved polygalacturonase production

from Bacillus sp. MG-cp-2 under submerged (SmF) and solid state (SSF)

fermentation.” Letters in Applied Microbiology. 34: 317–322.

Kapoor, M., Beg, Q.K., Bhushan, B., Dadhich, K.S and Hoondal, G.S. (2000),

“Production and partial purification and characterization of a thermoalkalistable

polygalacturonase from Bacillus sp. MG-cp-2.” Process Biochemistry. 36: 467–

473.

Kapoor, M., Beg, Q.K., Bhushan, B., Singh, K., Dadhich, K.S and Hoondal, G.S.

(2001). Application of an alkaline and thermostable polygalacturonase from

Bacillus sp. MG-cp-2 in degumming of ramie (Boelumeria nivea) and sun hemp

(Crotalaria juncea) bast fibers. Process Biochem., 36: 803 - 807.

Kar, S and Ray, R.C. (2011). Purification, characterization and application of

thermostable exo-polygalacturonase from Streptomyces erumpens MTCC 7317.

Journal of Food Biochemistry. 35: 133-147.

Kashyap, D. R., Vohra, P. K., Chopra, S and Tewari, R (2001). Applications of

pectinases in the commercial sector: A review. Bioresour. Technol., 77: 215-227.

Kashyap, D.R., Chandra, S., Kaul, A and Tewari. (2000). Production, purification

and characterization of pectinase from a Bacillus sps.DT7. World Journal of

Microbiology and Biotechnol., 16: (6) No.3. 277-282.

Kasing Apun., Bor Chyan Jong and Mohd. Azib Salleh. (2000). Screening and

isolation of a cellulolytic and amylolytic Bacillus from sago pith waste. J. Gen.

Appl. Microbiol., 46: 263–267.

Kaur, G., Kumar, S and Satyanarayana, T. (2004). Production, characterization

and application of a thermostable polygalacturonase of a thermophilic mould

Sporotrichum thermophile Apinis. Bioresour. Technol., 94: 239–243.

Kavitha, R and Umesh-Kumar, S. (2000). Genetic improvement of Aspergillus

carbonarius for pectinase overproduction during solid state growth, Biotechnol.

Bioeng., 67: 121–125.

Kilara, A. (1982). Enzymes and their uses in the processed apple industry – A

review. Process Biochem., 17: 35-41.

Kirk, T.K and Jefferies, T.W. (1996). Role of microbial enzymes in pulp and paper

processing. American chemical society, Washington D.C. PP:1-4.

Kobayashi, T., Koike, K., Yoshimatsu, T., Higaki, N and Suzumatsu, A, et al.,

(1999).Purification and properties of a low-molecular-weight, high-alkaline

pectate lyase from an alkaliphilic strain of Bacillus. Basic biotechnology

Biochem., 63: 65-72.

Koboyashi, T., Higaki, N., Yajima, N., Suzumatsu, A., Haghihara, H and Kawai, S

et al., (2001). Purification and properties of a galacturonic acidreleasing

exopolygalacturonase from a strain of Bacillus. Biosci. Biotechnol. Biochem., 65:

842-847.

Koki Horikoshi. (1995). Discovering novel bacteria, with an eye to

biotechnological applications. Curr. Opin. Biotechnol., 6: 292-297.

Koponen, J. M., Buchert, J., Kaisa, S. P and Torronen, R. A. (2008). Effect of

pectinolytic juice production on the extractability and fate of bilberry and black

currant anthocyanins. Euro. Food. Res. Tech. 222: 485−494.

Kotoujanky, A. (1987). Molecular genetics of pathogenesis by soft rot erwinias.

Annu. Rev. Phytopathol., 25: 405-430.

Kumar, S.S and Palanivelu, P. (1999). Purification and characterization of an

exoplolygalacturonase from the thermophilic fungus, Thermomyces lanuginosus.

World J. Microbiol. Biotechnol., 15: 643–646.

Laing, E and Pretorius, I.S. (1993). Co-expression of an Erwinia crysanthemi

pectate lyase-encoding gene (pel E) and an E. carotovora polygalacturonase-

encoding gene (peh 1) in Saccharomyces cerevisiae. Appl. Microbiol.

Biotechnol., 75:149–158.

Lang, C and Do¨rnenburg, H. (2000). Perspectives in the biological function and

the technological application of polygalacturonases. Appl. Microbiol. Biotechnol.,

53: 366–375.

Lara-Márquez, A., Zavala-Páramo, M.G., López-Romero, E and Camacho, H.C.

(2011). Biotechnological potential of pectinolytic complexes of fungi.

Biotechnology Letters. 33: 859-868.

Laskowski, R .A., MacArthur, M. W., Moss, D. S and Thornton, J M. (1993).

PROCHECK: a program to check the stereochemical quality of protein

structures. J. Apple. Cyst., 26: 283-291.

Laskowski, R.A. (2001). PDBsum: summaries and analyses of PDB structures.

Nucleic Acids Res., 29: 221–222.

Laskowski, R.A., Hutchinson, E.G., Michie, A.D., Wallace, A.C., Jones, M.L.,

Thornton, J.M. (1997). PDBsum: a web-based database of summaries and

analyses of all PDB structures. Trends Biochem. Sci., 22: 488–490.

Lawrence A Kelley and Michael J.E Sternberg. (2009). Protein structure

prediction on the Web: a case study using the Phyre server. Nature Protocols. 4:

363–371.

Leda R. Castilho, Ricardo A. Medronho, Tito L.M (2000). Alves Production and

extraction of pectinases obtained by solid state fermentation of agroindustrial

residues with Aspergillus niger. Bioresource Technology. 71: 45 – 50.

Liao, C. H. (1989). Analysis of pectate lyases produced by soft rot bacteria

associated with spoilage of vegetables. Appl. Environ. Microbiol., 55:1677-1683.

Liu, Y., Shi, J and Langrish, TAG. (2006). Water-based extraction of pectin from

flavedo and albedo of orange peels. Chemical Engineering Journal. 120: 203-

209.

Lonsane, B.K and Ohildyal, N.E. (1993). Exoenzymes. In: Doell H.W., Mitchell,

D.A., Rolty C.E., eds. Solid State Cultivation. Elsevier, N.Y, chap.11.

Luh, B.S and Pha, H. J. (1951). Studies on polygalacturonase of certain yeasts.

Arch. Biochem. Biophys., 33: 213-227.

Maceira, F.I.G., Pietro, A.D and Roncero, M.I.G. (1997). Purification and

characterization of a novel exopolygalacturonase from Fusarium oxysporum f.

sp. lycopersici. FEMS Microbiol Lett., 154: 37–43.

Maldonada, M.C and Strasser de saad, A.M. (1998). Production of

pectinesterase and polygalacturonase by Aspergillus niger in submerged and

solid state system. Journal of industrial microbiology and biotechnology. 20:134-

138.

Manachini, M., Fortina, C and Parini, C. (1987). Purification and properties of an

endopolygalacturonase produced by Rhizopus stolonifer. Biotechnol. Lett., 9:

219–224.

Márcia M.C.N. Soares, Roberto da Silva and Eleni Gomes. (1999). Screening of

bacterial strains for pectinolytic activity: Characterization of the

Polygalacturonase produced by Bacillus Sps. Revista de Microbiologia. 30: 299-

303.

Marcus, L., Barash, I., Sneh, B., Koltin, Y and Finkler, A. (1986). Purification and

characterization of pectolytic enzymes produced by virulent and hypovirulent

isolates of Rhizoctonia solani Kuhn. Physiol. Mol. Plant Pathol., 29: 325–336.

Maria Teresa Pretel, Pedro Lozano, Fernando Riquelme and f61ix Romojaro.

(2000). Pectic enzymes in fresh fruit processing: optimization of enzymic peeling

of oranges. Process Biochemistry. 32: (1).

Marin-Rodriguez, M.C., Orchard, J and Seymour, G.B. (2002). Pectate lyases,

cell wall degradation and fruit softening. Journal of Experimental Botany. 53:

2115-2119.

Martin, N., De Souza, S.R., Da Silva, R and Gomes, E. (2004). Pectinase

production by fungal strains in solid-state fermentation using agro-industrial

bioproduct, Braz. Arch. Biol. Technol., 47: 813–819.

Mathieu, Y., Jouanneau, J.P., Thomine, S., Lapons, D and Guern, J. (1994).

Cytosolic protons as secondary messengers in elicitor-induced defense

responses. Biochem. Soc. Symp., 60: 113-130.

McCready, R.M and Reeve, R.M. (1955). Test for pectin based on reaction of

hydroxamic acids with ferric ion. J. Agric. Food Chem., 3: 260–268.

Membre, J.M and Burlot, P.M. (1994). Effects of Temperature, pH, and NaCl on

Growth Pectinolytic Activity of Pseudomonas marginalis. Applied and

Environmental Microbiology. 6: (60), 2017-2022.

Merin, M.G., Mendoza, L.M., Farias, M.E and de Ambrosini, V.I.M. (2011).

Isolation and selection of yeasts from wine grape ecosystem secreting cold-

active pectinolytic activity. International Journal of Food Microbiology.147: 144-

148.

Miller, G.L. (1959). Use of dinitrosalycilic acid reagent for determination of

reducing sugar. Anal Chem., 31: 426-428.

Mohnen, D. (2008). Pectin structure and biosynthesis. Current Opinion in Plant

Biology. 11: 266-277.

Morris, A.L., Mac Arthur, M.W., Hutchinson, E.G and Thornton, J.M. (1992).

Stereochemical quality of protein structure coordinates. Proteins. 12: PP:345-

364.

Morris, G., Kök, S., Harding, S and Adams, G. (2010). Polysaccharide drug

delivery systems based on pectin and chitosan. Biotechnology & Genetic

Engineering Reviews. 27: 257-284.

Mudgett, A.E. (1986). Solid state fermentations in A. L. Demain and N. A.

Solomon, eds. Manual of Industrial Microbiology and Biotechnology, American

Society for Microbiology. Washington. D.C., 66-83.

Mullis, K.B. (1990). The Unusual origin of Polymerase Chain reaction. Sci. Am., 56-65.

Murad, H.A and Azzaz, H.H. (2011). Microbial Pectinases and ruminant nutrition.

Research Journal of Microbiology. 6: (3). 246-269.

Nagai, M., Katsuragi, T., Terashita, T., Yoshikawa, K and Sakai, T. (2000).

Purification and characterization of an endo-polygalacturonase from Aspergillus

awamori. Biosci. Biotechnol. Biochem., 64:1729–1732.

Naidu, G.S.N and Panda, T. (1998). Production of pectolytic enzymes – a review.

Bioprocess Eng., 19: 355-361.

Nair, S.R., Rakshit, S.K and Panda, T. (1995). Effect of carbon sources on the

synthesis of pectinase by Aspergillus. Bioprocess Biosyst. Eng., 13: 37- 40.

Nakawawa, T., Nagaoka, T., Taniguchi, S., Milyaji, T and Tomizuka, N. (2004).

Isolation and characterization of psychrophylic yeasts producing cold-adapted

pectinolytic enzymes. Letters in Applied Microbiology. 38: 383-387.

Nasrin Akhtar., Muhammad, A., Ghauri, Aamira Iqbal., Munir, A., and Anwar

Kalsoom Akhtar. (2008). Biodiversity and phylogenetic analysis of culturable

bacteria indigenous to Khewra salt mine of Pakistan and their industrial

importance. Braz. J. Microbiol., 39:1 São Paulo.

Nasuno, S and Starr, M.P. (1966). Pectic enzymes of Pseudomonas marginalis.

Phytopathology. 56:1414-1415.

Naumov, G.I., Naumova, E.S., Aigle, M., Masneuf, I and Belarbi, A. (2001).

Genetic reidentification of the pectinolytic yeast strain SCPP as Saccharomyces

bayanus var. uvarum. Appl. Microbiol. Biotechnol., 55:108–111.

Nazina, T. N., Taurova, T. P., Poltaraus, A. B., Novikova, E. V., Grigoryan, A. A.,

Ivanova, A. E., Lysenko, A. M., Petrunyaka, V., Osipov, G. A., Belyaev, S. S and

Ivanov, M. V. (2001). “Taxonomic study of aerobic thermophilic bacilli:

descriptions of Geobacillus subterrenaus sp. nov. and Geobacillus uzenensis sp.

nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus,

Bacillus thermocatenutalus, Bacillus thermoleovorans, Bacillus kaustophilus,

Bacillus thermoglucosidasius and, Bacillus thermodenitrificans to Geobacillus as

the new combinations G. stearothermophilus, G. thermocatenulatus, G.

thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G.

thermodenitrificans.” International Journal of Systematic and Evolutionary

Microbiology. 51: 433-446.

Neeta Raj Sharma, Anupama Sasankan, Anjuvan Singh and Giridhar Soni.

(2011). Production of PGase and Pectin Methyl Esterase from Agrowaste by

using various isolates of Aspergillus niger. Insight Microbiology. 1: 1. 1-7.

Nikaidou, N., Kamio, Y and Izaki, K. (1992). Molecular cloning and nucleotide

sequence of a pectin lyase gene from Pseudomonas marginalis N6301.

Biochem. Biophys. Res. Commun., 182:14-19.

Nitinkumar, P. Patil1 and Bhushan, L. Chaudhari. (2010). Microbiology

production and purification of pectinase by soil isolate Penicillium sp. and search

for better agroresidue for its ssf. Recent Research in Science and Technology. 2:

(7). 36-42.

Niture, S.K. (2008). Comparative biochemical and structural characterizations of

fungal polygalacturonases. Biologia. 63: 1-19.

Nozaki, K., Miyairi, K., Hizumi, S., Fukui, Y and Okuno, T. (1997). Novel

exopolygalacturonases produced by Alternaria mali. Biosci. Biotechnol.

Biochem., 61:75–80.

Ojumu, T., Solomon, V., Bamidele, O., Betiku, E., Layokun S. K. and Amigun, B.

(2003). Cellulase Production by Aspergillus flavus Linn Isolate NSPR 101

fermented in sawdust, bagasse and corncob. African J. Biotechnol. 2: 150–152.

Orengo, C.A., Michie, A.D., Jones, S., Jones, D.T., Swindells, M.B and Thornton,

J.M. (1997). CATH-a hierarchic classification of protein domain structures.

Structure. 5:1093–1108.

Oriol, E., Raimbault, M., Roussos, S and Viniegra - Gonzales, G. (1988a). Water

and water activity in the solid state fermentation of cassava starch by Aspergillus

niger. Appl. Microbiol. Biotechnol., 27: 498-503.

Oriol, E., Schettin, O.B., Viniegra-Gonzalez, O and Raimbault, M. (1988b). Solid

state culture of Aspergillus niger on support. J. Ferm. Technol., 66: 57-62.

Ouattara, H.G., Reberchon, S., Niamke, S.L and Nasser, W. (2010). Biochemical

properties of pectate lyases produced by three different Bacillus strains isolated

from fermenting cocoa beans and characterization of their cloned genes. Applied

and Environmental Microbiology.76: 5214-5220.

Padma, P.M., Anuradha, K and Reddy, G. (2011). Pectinolytic yeasts isolates for

cold-active polygalacturonase production. Innovative Food Science and

Emerging Technologies. 12: 178-181.

Palaniyappan, M., Vijayagopal, V., Renuka Viswanathan, and Viruthagiri, T.

(2009). Screening of natural substrates and optimization of operating variables

on the production of pectinase by submerged fermentation using Aspergillus

niger MTCC 281. African Journal of Biotechnology. 8: (4), 682-686.

Paloma¨ki, T and Saarilahti, H.T. (1997). Isolation and characterization of new

C-terminal substitution mutation affecting secretion of polygalacturonases in

Erwinia carotovora sps. carotovora. FEBS Lett., 400:122–126.

Panda, T., Nair, S.R and Premkumar, M. (2004). Regulation of synthesis of the

pectolytic enzymes of Aspergillus niger. Enzyme Microb. Technol., 34: 466-473.

Pandey, A. (1994). Solid-State Fermentation: An overview. In: Solid- State

Fermentation, Wiley Eastern Ltd. New Delhi, India pp. 3–10.

Pariza, M.W and Foster, E.M (1983). Determining the safety of enzymes used in

food industry. J. Food Prot., 46: 453-458.

Patil, R and Agasar Dayanand (2006). Exploration of regional agrowastes for the

production of pectinase by Aspergillus niger. Food Technol. Biotechnol., 44: 289-

292.

Patil, S. R and Dayanand, A. (2006). Production of pectinase from deseeded

sunflower head by Aspergillus niger in submerged and solid-state condition.

Biores. Tech. 97: 2054−2058.

Perenirova, L., Benen, J.A.E and Visser, J. (1998). pgaE encodes a fourth

member of the endopolygalacturonase gene family from Aspergillus niger. Eur. J.

Biochem., 251: 72-78.

Perez, S., Rodriguez-Carvajal, M.A and Doco, T. (2003). A complex plant cell

wall polysaccharide: rhamnogalacturonan II. A structure in quest of a function.

Biochimie., 85: 109-121.

Philippidis, G.E. (1994). Cellulase production technology. In: Himmel M.E.,

Baker J.O., Overend R.P.,eds, Enzymatic Conversion of Biomass for Fuels

Production, ACS Symp. Series. Vol. 566: Chap.9. American Chemical Society.

Washington, D.C., pp. 188-217.

Phutela, U. Dhuna, V. Sandhu, S and Chadha, B.S. (2005). Pectinase and

polygalacturonase production by a thermophilic Aspergillus fumigates isolated

from decomposting organge peels. Braz. J. Microbiol., 36: 63- 69.

Pilar Blanco, Carmen Sieiro, TomaËs G (1999). Villa Production of pectic

enzymes in yeasts FEMS. Microbiology Letters. 175: 1-9.

Pilnik, W and Rombouts, F. M. (1985). Polysaccharides and food processing.

Carbohydrate Res., 142: 93-105.

Pilnik, W and Voragen, A.G.J. (1970). Pectic substances and other uronides. In:

The biochemistry of fruits and their products, A. C. Hulme, (Ed.), 1: 53-87,

Academic Press. ISBN: 0123612012, London, England.

Piñeiro, Z., Natera, R., Castro, R., Palma, M., Puertas, B and Barroso, C.G.

(2006). Characterization of volatile fraction of monovarietal wines: Influence of

winemaking practices. Analytica Chimica Acta.563: 165-172.

Pinelo, M., Arnous, A and Meyer, A.S. (2006). Upgrading of grape skins:

Significance of plant cell-wall structural components and extraction techniques

for phenol release. Trends in Food Science and Technology. 17: 579-590.

Polizeli, M.L.T.M., Jorgem, J.A and Terenzi, H.F. (1991). Pectinase production by

Neurospora crassa: purification and biochemical characterization of extracellular

polygalacturonase activity. J. Gen. Microbiol., 137:1815–1823.

Prade, R.A., Zhan, D., Ayoubi, P and Mort, A.J. (1999). Pectins, pectinases and

plant-microbe interactions. Biotechnol. Gen. Eng. Rev., 16: 361-391.

Prathyusha, K and Suneetha, V. (2011). Bacterial Pectinases and their Potent

Biotechnological Application in Fruit Processing/Juice Production Industry: A

Review. Journal of Phytology. 3: (6). 16-19.

Praveen Kumar, D., Thangabalan, B., Venkateswara Rao, P and Yugandhar,

N.M. (2011). Production of Pectinase enzyme by Aspergillus niger using Ficus

religiosa leaves in Solid state fermentation. International journal of Pharmacy and

Technology. 3: (1). 1351-1359.

Raj Kashyap D, Kumar Soni S, Tewari R. (2003). Enhanced production of

pectinase by Bacillus sp. DT7 using solid state fermentation. Bio resource

technology., 88: 251-254.

Ramachandran, G.N and Sasisekharan, V. (1968). Conformation of polypeptides

and proteins. Adv. Protein Chem., 23: 283-438.

Ramanujam, N., Saritha and Palani subramani. (2008). Production of pectinlyase

by solid-state fermentation of sugarcane bagasse using Aspergillus niger.

Advanced Biotech., 30-33.

Ranveer Singh Jayani, Shivalika Saxena, and Reena Gupta. (2005). Microbial

pectinolytic enzymes: A review. Process Biochemistry. 40: 2931–2944.

Ranveer Singh Jayani, Surendra Kumar Shukla and Reena Gupta. (2010).

Screening of Bacterial Strains for Polygalacturonase Activity: Its Production by

Bacillus sphaericus (MTCC 7542). Enzyme Research. SAGE-Hindawi Access to

Research. Article ID 306785. 1-5.

Rasheedha, A.B., Kalpana, M.D., Gnanaprabhal, G.R., Pradeep, B.V and

Palaniswamy, M. (2010). Production and characterization of Pectinase enzyme

from Penicillium chrysogenum. Indian J.Sci.Technol., 3: 377-381.

Rastogi, G. (1998). Vishal’s objective botany. Meerut, India: Vishal Publishers.

Reda, A., Bayoumi, Hesham, .Yassin, M., Mahmoud, Swelim, A., Ebtsam, Z.

Abdel-All. (2008). Production of Bacterial Pectinase(s) from Agro-Industrial

Wastes Under Solid State Fermentation Conditions. Journal of Applied Sciences

Research. 4:(12). 1708-1721.

Reid, I and Ricer, M. (2000). Pectinase in paper making solving retention

problems in mechanical pulps bleached with hydrogen peroxide. Enzyme

Microbiol. Technol., 26: 115-123.

Reid, I and Richard, M. (2004). Purified pectinase lowers cationic demand in

peroxide-bleached mechanical pulp. Enzyme Microbial Technol., 34: 499–504.

Revilla, I and Ganzalez-san Jose, M.L. (2003). Addition of pectolytic enzymes: an

enological practice which improves the chromaticity and stability of red wines. Int.

J. Food Sci. Technol., 38: 29–36.

Rexova-Benkova, L and Markovic, O. (1976). Pectic enzymes. Adv.

Carbohydrate Chem., 33: 323–85.

Reymond, P., Deleage, G., Rascle, C and Fevre, M. (1994). Cloning and

sequence analysis of a polygalacturonases-encoding gene from the

phytopathogenic fungus Sclerotinia sclerotiorum. Gene. 146: 233–237.

Ribeiro, D.S., Henrique, S.M.B., Oliveira, L.S., Macedo, G.A and Fleuri, L.F.

(2010). Enzymes in juice processing: a review. International Journal of Food

Science and Technology. 45: 635-641.

Ribereau-Gayon, P., Dubourdieu, D., Doneche, B and Lonvaud, A. (2006).

Handbook of Enology, Vol. I. The Microbiology of Wine and Vinifications (2nd

edition), John Wiley and Sons, ltd., ISBN: 0470010347, New York, USA.

Richardson, J.S. (1981). The anatomy and taxonomy of protein structure.

Adv.Protein Chem., 34:167-339.

Rodrigo., Magrane, Michele., Maria J. Martin., Darren A., Natale,Claire

O’Donovan., Nicole Redaschi and Lai-Su L. Yeh. (2004). UniProt: the Universal

Protein knowledgebase. Nucleic Acids Research. 32: D115-D119.

Rodrigues-Palenzuela, P., Burr, T.J and Collmer, A. (1991). Polygalacturonase is

a virulence factor in Agrobacterium tumifaciens biovar 3. J. Bacteriol., 173: 6547–

6552.

Rombouts, F.M and Pilnik, W.L. (1980). Pectic enzymes. In: Economic

microbiology: microbial enzymes and bioconversions, A. H. Rose, (Ed.), 5: 227-

282. Academic Press, ISBN: 0125965559, London, England.

Rout-Mayer, M.A., Mathieu, Y., Cazolé, A.C and Guern, J. (1997). Extracellular

alkalinization and oxidative burst induced by fungal pectin lyase in tobacco cells

are not due to the perception of oligogalactoronide fragments. Plant Physiol.

Biochem., 35: 321-330.

Ruth, M.F., Howard, J.A., Nikolov, Z., Hooker, B. S., Himmel, M.E and Thomas,

S.R. (1999). Preliminary Economic Analysis of Agricultural Production for Use in

Cellulose Hydrolysis. Abstracts from the 21st Symposium on Biotechnology for

Fuels and Chemicals, Fort Collins, Colorado, Mays, Abst. L., 3-49.

Saadoun, I., Rifaat, R., Tasnim, A., Qotaiba and Amjad, M. (2007). Isolation,

characterization and screening for fiber hydrolytic enzymes-producing

Streptomycetes of Jordanian forest soils. Biotechnology. 6: 120-128.

Sakai, T and Takaoka, A. (1984). Purification, crystallization and some

properties of endo-polygalacturonase from Aureobasidium pullulans. Agric. Biol.

Chem., 49: 449–458.

Sakai, T. (1992). Degradation of pectins. In: Winkelmann G, editor. Microbial

degradation of natural products. Weinheim: VCH. p. 57–81.

Sakai, T., Sakamoto, T., Hallaert, J and Vandamme, E.J. (1993). Pectin,

pectinase and protopectinase: production, properties and applications. Adv. Appl.

Microbiol., 39: 231–294.

Salazar, l and Jayasinhe, U. (1999). Fundamentals of purification of plant

viruses. Techniques in plant virology. 1-10.

Sarioglu, K., Demir, N., Acar, J and Mutlu, M. (2001). The use of commercial

pectinase in the fruit juice industry, part 2: Determination of the kinetic behaviour

of immobilized commercial pectinase. Journal of Food Engineering .47: 271-274.

Sathyanarayana, N.G and Panda, T. (2003). Purification and biochemical

properties of microbial pectinases - a review. Process Biochem., 38: 987–996.

Sato, M and Kaji, A. (1980). Another pectate lyase produced by Streptomyces

nitrosporeus. Agric. Biol. Chem., 44:1345-1349.

Sato, M and Kaji, A. (1981). Screening for actinomycetes capable of producing

pectinolytic enzymes. Tech. Bull. Fac. Agric.Kagawa univ., 32:121-123.

Sayle, R. and Milner-White, E. J. (1995). RasMol: biomolecular graphics for all.

Trends Biochem Sci., 20: 374-376.

Schapira, M., Abagyan, R and Totrov, M. (2002). Structural model of nicotinic

acetylcholine receptor isotypes bound to acetylcholine and nicotine. BMC Struct.

Biol., 2:(1).

Schols, H.A., Visser, R.G.F and Voragen, A.G.J. (2009). Pectin and Pectinases.

Wagenigen Academic Publishers, ISBN 978-90-8686-677-9, Wagenigen,

Netherlands.

Schwan, R.F and Wheals, A.E. (2004). The microbiology of cocoa fermentation

and its role in chocolate quality. Critical Reviews in Food Science and Nutrition.

44: 205-221.

Scott, D. (1978). Enzymes, Industrial. In: Grayson, M.E. Karth, D., Othma, K.,

editors. Encyclopedia of Chemical technology. New York: Wiley; p: 173-224.

Sebastian, F.C., Jorge, A.A and Roque, A.H. (1996). Pectinase production

profile of Aspergillus foetidus in solid-state cultures at different acidities.

Biotechnol. Lett., 18: 251–256.

Sergei, G., Bavykin, Yuri, P., Lysov, Vladimir Zakhariev, John, J., Kelly, Joany

Jackman, David, A. Stahl, and Alexey Cherni. (2004). Use of 16S rRNA, 23S

rRNA, and gyrB Gene Sequence Analysis To Determine Phylogenetic

Relationships of Bacillus cereus Group Microorganisms. Journal of clinical

Microbiology. 42: (8). p. 3711–3730.

Serrat, M., Bermúdez, R.C. and Villa, T.G. (2002). Production, purification and

characterization of a polygalacturonase from a new strain of Kluyveromyces

marxianus isolated from coffee wet-processing wastewater. Applied Biochemistry

and Biotechnology. 97: 193-208.

Sharma, H. S. S. (1987). Screening of polysaccharide-degrading enzymes for

retting flax stem. Int. Biodeterior. Bull. 23: 181-186.

Shembekar, V.S and Dhotre, A. (2009). Studies of pectin degrading

microorganisms from soil. Journal of microbial world. 11: 216-222.

Silva, C.F., Schwan, R.F., Dias, E.S and Wheals, A.E. (2000). Microbial diversity

during maturation and natural processing of coffee cherries of Coffea arabica in

Brazil. International Journal of Food Microbiology. 60: 251-260.

Silva, D., Tokuioshi, K., da Silva Martins, E., da Silva, R and Gomes, E. (2005).

Production of pectinase by solid-state fermentation with Penicillium viridicatum

RFC3. Process Biochem., 40: 2885-2889.

Singh, S. A., Plattner, H and Diekmann, H. (1999). Exopolygalacturonate lyase

from a Thermophilic Bacillus sp. Enzyme and Microbial Technology. 25: 420–

425.

Singh, S. A., Ramakrishna, M and Rao, A.G.A. (1999). Optimization of

downstream processing parameters for the recovery of pectinase from the

fermented broth of Aspergillus carbonarious. Process Biochem., 35: 411–417.

Slepeckly R. A and Hemphill H. E, (1991). “The genus Bacillus-Nonmedical”, ln

The Prokaryotes 2nd Edition, edited by A. Ballows (Springer Verlag, New York,).

1663-1696.

Smith, J.E. and Aidoo, K.E (1988). Growth of fungi on Solid Substrates.

Physiology of Industrial Fungi. Blackwell. Oxford, England, 249-269.

Sneath, P.H.A. (1986). Endospore-forming Gram-Positive Rods and Cocci. In:

Bergey’s manual of systematic bacteriology, (Murray RGE, Brenner DJ, Bryant

MP et al Eds) 1st edn., Baltimore, Md., Williams and Wilkins, pp 1104–1207.

Soares, M.M.C.N., Da Silva, R and Gomes, E. (1999). Revista de

Microbiologia.30: 4, 299–303.

Solis, S., Flores, M.E and Huitron, C. (1997). Improvement of pectinase

production by interspecific hydrids of Aspergillus strains. Lett. Appl. Microbiol.,

24: 77-81.

Solomon, B.O., Amigun, B., Betikue, T.V., Ojumu, T and Layokun, S.K. (1999).

Optimization of cellulase production by Aspergillus flavus Linn. Isolates NSPR

101 grown on baggase. JNSCHE., 18: 61 – 68.

Sone, H., Sugiura, J., Itoh, Y., Izaki, K and Takahashi, H. (1988). Production and

properties of pectin lyase in Pseudomonas marginalis induced by mitomycin C.

Agric. Biol. Chem., 52: 3205-3207.

Soriano, M., Diaz, P and Pastor, F.I.J. (2005). Pectinolytic systems of two

aerobic sporogenous bacterial strains with high activity on pectin. Curr.

Microbiol., 50: 114-118.

Souza, J.V.B., Silva, T.M., Maia, M.L.S and Teixeira, M.F.S. (2003). Screening of

fungal strains for pectinolytic activity: endopolygalacturonase production by

Peacilomyces clavisporus 2A.UMIDA.1. Process Biochem., 4: 455–458.

Spagnuolo, M., Crecchio, C., Pizzigallo, M.D.R and Ruggiero, P. (1999).

Fractionation of sugar beet pulp into pectin, cellulose, and arabinose by

arabinases combined with ultrafiltration. Biotechnology and Bioengineering. 64:

685-691.

Spiridonov N.A., Wilson D.B. (1998). Regulation of biosynthesis of individual

cellulases in Thermomonospora fusca. Journal of Bacteriology. 180: 3529– 3532.

Spooner, F. R., Jr. and Hammerschmidt, R. (1989). Characterization of

extracellular pectic enzymes produced by streptomyces sps, Phytopathology.

70:119.

Sterling, C. (1970). Crystal-structure of ruthenium red and stereochemistry of its

pectic stain. Am. J. Bot., 57:172–175.

Stutzenberger, F. (1992). Pectinase Production. Encyclopedia of Microbiology.

(Lederberg J.ed-in-chief), Academy press, New York. 3: 327-337.

Sumantha, A., Sandhya, C., Szakacs, G., Soccol, C.R and Pandey, A. (2005).

Production and partial purification of a neutral metalloprotease by fungal mixed

substrate fermentation, Food Technol. Biotechnol., 43: 313–319.

Suneetha,V and Zaved Ahmed Khan. (2010). Screening, Characterisation and

Optimization of Microbial Pectinase, Soil Enzymology, Soil Biology-22. G. Shukla

and A.Varma (eds) Springer-Verlag BerlinHeidelberg. (2011). PP: 3-337.

Swain, M.R and Ray, R.C. (2010). Production, characterization and application of

a thermostable exo-polygalacturonase by Bacillus subtilis CM5. Food

Biotechnology. 24: 37-50.

Ta$kın, E and Rengin, E (2008). Food Biotechnology. 22: 203 – 217.

Taiwo, L.B and Oso, B.A. (2004). Influence of Composting techniques on

microbial succession, temperature and pH in a Composting municipal solid

waste. African Journal of Biotechnology. 3: 239-243.

Takao, M., Akiyama, K and Sakai, T. (2002). Purification and characterization of

thermostable endo-1,5-alpha-L-arabinase from a strain of Bacillus

thermodenitrificans. Applied and Environmental Microbiology. 68:1639 -1646.

Tamura, K., Dudley, J., Nei, M and Kumar, S. (2007). MEGA 4-Molecular

Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol.Biol.Evol., 24:

(8), 1596-1599.

Tanabe, H., Kobanayashi, Y and Akamatsu, T. (1988). Pre-treatment of pectic

waste water in pectate lyase from an alkalophilic Bacillus sps. Agric. Biochem.,

52: 1853-1856.

Tari, C., Gogus, N and Tokatli, F. (2007). Optimization of biomass, pellet size

and polygalacturonase production by Aspergillus sojae ATCC 20235 using

response surface methodology. Enzyme Microb.Technol., 40: 1108-1116.

Thakur, B.R., Singh, R.K and Handa, A.K. (1997). Chemistry and uses of pectin:

a review. Critical Reviews in Food Science and Nutrition. 37: 47-73.

Tierny, Y., Bechet, M., Joncquiert, J.C., Dubourguier, H.C and Guillaume, J.B.

(1994). Molecular cloning and expression in Escherichia coli of genes encoding

pectate lyase and pectin methylesterase activities from Bacteroides

thetaiotaomicron. J. Microbiol., 76: 592–602.

Tochi, B.N., Wang, Z., Xu, S.Y and Zhang, W. (2009). The influence of a

pectinase and pectinase/hemicellulases enzyme preparations on percentage

pineapple juice recovery, particulates and sensory attributes. Pak. J. Nutri., 8:

1184-1189.

Torres, E.F., Aguilar, C., Esquivel, J.C.C and Gonzalez, G.V. (2005). Pectinases.

In: Enzyme Technology, A. Pandey, C. Webb, C.R. Soccol, C. Larroche (Eds.),

Asiatech Publishers Inc., pp. 273–296.

Torres-Favela, E., Aguilar C., Esquivel-Contreras, C.J and Gustavo, G.V. (2003).

Pectinase. In Enzyme Technology. Asiatech Publisher Inc. Delhi. 273−296.

Tsuyumu, S and Chatterjee, A. K. (1984). Pectin lyase production in Erwinia

chrysanthemi and other soft-rot Erwinia species. Physiol. Plant Pathol., 24: 291-

302.

Tucker, G. A and Woods, L. F. J. (1991). Enzymes in production of Beverages

and Fruit juices. Enzymes in Food Processing. Blackie, New York. 201-203.

Urmila Phutela., Vikram Dhuna., Shobhna Sandhu and Chadha. B.S. (2005).

Pectinase and polygalacturonase production by a thermophilic Aspergillus

fumigatus isolated from decomposting orange peels. Brazilian Journal of

Microbiology. 36: 63-69.

Van der Vlugt-Bergmans C.J.B., Meeuwsen P.J.A., Voragen A.G.J., and van

Oogen A.J.J. (2000). Endo-xylogalacturonan hydrolase, a novel pectinolytic

enzyme. Appl. Environ. Microbiol., 66: 36–41.

van Rensburg, P and Pretorius, I.S. (2000). Enzymes in winemaking: Harnessing

natural catalysts for efficient biotransformation: a review. South African Journal of

Enology and Viticulture. 21: 52-73.

Viikari, L., Tenakanen, M and Suurnakki, A. (2001). Biotechnology in the pulp

and paper industry. In: Rehm HJ, editor. J. Biotechnology. VCH-Wiley, 50: 523–

546.

Vilanova, M and Sieiro, C. (2006). Determination of free and bound terpene

compounds in Albariño wine. Journal of Food Composition and Analysis. 19:

694-697.

Virginia, A. V., Osvaldo, D. D., Rajni Hatti-Kaul and Bo Mattiasson. (2004).

Lipase producing microorganisms from a Kenyan alkaline soda lake.

Biotechnology letters. 26: 81-86.

Vincent, J.M. (1970). A Manual for the Practical Study of the Root Nodule

Bacteria. International Biological Programme 7 Marylebone Rood, London, NWi,

Blackwell Scientific Publications, Oxford & Edinburgh. pp:75.

Voragen, F., Schols, H and Visser, R. Eds. (2003). Advances in pectin and

pectinase research. Annals of Botany. 94: 479–480.

Wallace, A.C., Laskowski, R.A and Thornton, J.M. (1995). LIGPLOT: a program

to generate schematic diagrams of protein-ligand interactions. Protein

Engineering. 8: 127-134.

Ward, O.P and Moo -Young, M. (1989). Enzymatic degradation of cell wall and

related plant polysaccharides. CRC Crit. Rev. Biotechnol., 8: 237- 274.

Watson, W., Minogue, T., Val, D., von Bodman, S and Churchill, M. (2007).

Structural Basis and Specificity of Acyl-Homoserine Lactone Signal Production in

Bacterial Quorum Sensing. Molecular Cell. 9: 685 – 694.

Wei Wang and Mi Sun (2009). Phylogenetic relationships between Bacillus

species and related genera inferred from 16S r RNA sequences. Brazilian

Journal of Microbiology. 40: 505-521.

Wen-Jing, Lu; Hong-Tao, Wang; Shi-Jian, Yang; Zhi-Chao, Wang and Yong-

Feng, Nie. (2005). Isolation and characterization of mesophilic cellulose

degrading bacteria from flower stalks-vegetable waste co-composting system.

The Journal of General and Applied Microbiology. 51: 353-360.

West, S. (1996). Olive and other oils. In: Industrial enzymology (2nd edition), T.

Godfrey and S. West, (Eds.), pp. 293-300, Stockholm Press, ISBN: 0333594649,

New York, USA.

Whitaker, J. R. (1984). Pectic substances, pectic enzymes and haze formation in

fruit juices (review). Enzyme Microb. Technol., 6: 341-349.

Whitaker, J.R. (1990). Microbial pectinolytic enzymes. In: Fogarty W.M, Kelly

C.T, editors. Microbial enzymes and biotechnology. 2nd ed. London: Elsevier

Science Ltd. P:133–176.

Whitaker, J.R. (1990a). New and future uses of enzymes in food processing.

Food Biotechnol., 4: 669–697.

Whitaker, J. R. (1991). Microbial pectolytic enzymes. In: Microbial Enzymes and

Biotechnology (eds. Fogarty, W. M. and Kelly, C. T.). Elsevier Applied Science.

London and New York. pp. 133-175.

Will, F., Bauckhage, K and Dietrich, H. (2000). Apple pomace liquefaction with

pectinases and cellulases: analytical data of the corresponding juices. European

Food Research and Technology. 211: 291-297.

William, G.W., Susan, M.B., Dale, A.P and David, J.L. (1991). 16S Ribosomal

DNA amplification for phylogenetic study. J. Bacteriol., 173: 697–703.

Wolf, D., Wang, J., Phillpot, S.R and Gleiter.H. (1995). Phonon-Induced

Anomalous Specific Heat of a Nanocrystalline Model Material by Computer

Simulation. Phys. Rev. Lett., 74: 4686 – 4689.

Wood, P.J., Erfle, J.D and Teather, R.M. (1988). Use of complex formation

between congo red and polysaccharide in detection and assay of polysaccharide

hydrolases. Methods in Enzymology. 160: 59-74.

Wood, T.M. and Bhat, K.M (1988). Methods for measuring cellulose activities.

Methods Enzymol., 160: 87-112.

Wu, X.Y., Walker, M.J., Hornitzky and M., Chin, J. (2006). Development of a

group-specific PCR combined with ARDRA for the identification of Bacillus

species of environmental significance. J. Microbiol. Methods. 64: 107–119.

Yadav, S., Yadav, P.K., Yadav, D and Singh Yadava, K.D. (2009). Process

Biochemistry. 44: (1). 1-10.

Zar, J. H. (1974). Bio-Statistical Analysis, Prentice Hall, New Jersey, 620.

Zeni, J., Cence, K., Grando, C.E., Tiggermann, L., Colet, R., Lerin, L.A., Cansian,

R.L., Toniazzo,. G., de Oliveira, D and Valduga, E. (2010). Screening of

Pectinase-Producing Microorganisms with Polygalacturonase Activity. Appl.

Biochem. Biotechnol., Vol.163: No.3. PP: 383-392.

Zhang, J., Henriksson, G., Johansson, G. (2000). Polygalacturonase is the key

component in enzymatic retting of flax. J. Biotechnol., 81: 85-89.

Zheng. L., Du, Y and Zhang, J. (2001). Degumming of ramie fibers by alkalophilic

bacteria and their polysaccharide degrading enzymes. Bioresour. Technol., 78:

89-94.

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