raul krauss*, todd bosanac, thomas engber, rajesh devraj ...€¦ · small molecule inhibitors of...

1
Small Molecule Inhibitors of SARM1 Prevent Axonal Degeneration in vitro and in vivo Raul Krauss*, Todd Bosanac, Thomas Engber, Rajesh Devraj, Robert Hughes Disarm Therapeutics, Cambridge, Massachusetts 02139, USA 3. A Proprietary Screening Platform Identified Small Molecule SARM1 Inhibitors 7. SARM1 Inhibitors Prevent Neuropathy in vivo in a Paclitaxel CIPN Model Axonal degeneration is an early and ongoing event that causes disability and disease progression in many neurodegenerative disorders of the central, peripheral, and ocular nervous systems, including multiple sclerosis, ALS, peripheral neuropathies, and glaucoma. SARM1 is the central driver of an evolutionarily conserved program of axonal degeneration downstream of inflammatory, mechanical, metabolic, or chemical insults to the axon. SARM1 contains an intrinsic NADase enzymatic activity essential for its pro- degenerative functions, making it a compelling therapeutic target to treat neurodegeneration characterized by axonopathy. Disarm has developed a high-content screening platform and identified proprietary drug-like small molecule inhibitors of SARM1. These inhibitors protect rodent and human axons in vitro from mechanical, chemotherapeutic and mitochondrial damage. In sciatic nerve transection, SARM1 inhibitors prevent increases in plasma NfL, a clinically accessible biomarker of axonal degeneration. In a paclitaxel model of chemotherapy- induced peripheral neuropathy (CIPN) SARM1 inhibitors protect axonal structure (plasma NfL) and function (SNAP amplitude). This is the first demonstration that pharmacological inhibition of SARM1 can reproduce the axonal protective phenotype observed in SARM1 knockout mice. The availability of SARM1-dependent biomarkers of axonal degeneration enables rapid translation of SARM1 inhibitors from discovery to the clinic. SARM1 inhibitors have the potential to prevent axonal degeneration in peripheral and central axonopathies and provide a transformational disease-modifying treatment for these disorders. 1. SARM1 Drives Rapid NAD + Loss Leading to a Bioenergetic Crisis and Axonal Degeneration Triggers Diseases Axonal Degeneration Glaucoma Multiple sclerosis CIPN Neurodegenerative (PD, ALS) Peripheral neuropathies (diabetic, CMT) CNS, Eye PNS SARM1 Immuno/ inflammatory Metabolic / Toxins Trauma Mitochondrial / Other Intraocular pressure 2. SARM1 - The Central Driver of Axonal Degeneration in Neurological Diseases 4. SARM1 Inhibitors Protect from Mechanical, Chemical and Mitochondrial Insults Disarm’s small molecule inhibitors phenocopy SARM1 KO in primary DRG 5. SARM1 Inhibitors Protect Human Axons Human IPSC-derived motor neurons Inhibitors from multiple chemical series inhibit SARM1 NADase Disarm’s small molecule inhibitors phenocopy SARM1 KO Prevent increase of axonal structure biomarker plasma NfL and functional axonal conduction Control Cut Cut + DSRM-XX Axonal Fragmentation Uncut Cut Cut + 0 20 40 60 80 100 % Axonal Degeneration **** **** Pharmacological SARM1 Inhibition Genetic Inhibition in SARM1 KO ** p< 0.01; **** p < 0.0001; ANOVA with Bonferroni post-hoc Conclusions § Disarm has advanced a proprietary R&D platform to discover small molecule inhibitors of SARM1, the central driver of axonal degeneration § We are providing the first demonstration that Disarm’s novel small molecule SARM1 inhibitors reproduce the axonal protection phenotype seen in SARM1 knockout. Disarm’s compounds: Protect axons in vitro from multiple pathological insults Protect human iPSC-derived motor axons from traumatic injury Prevent axonal degeneration and preserve axonal function in vivo in a rodent model of chemotherapy-induced peripheral neuropathy (CIPN) Disarm is developing small-molecule SARM1 inhibitors for patients with neurological diseases such as MS, ALS and CIPN Cut Untreated Cut + DSRM-XX Axonal Fragmentation Paclitaxel Untreated Paclitaxel + DSRM-XX Axonal Fragmentation Axonal Fragmentation NfL Biomarker NfL Biomarker NfL Biomarker 0 2000 4000 6000 8000 10000 12000 NfL (pg/ml) Untreated Rotenone Rotenone + **** **** 0 2000 4000 6000 8000 10000 NfL pg/ml ** Uncut Cut *** 0 10000 20000 30000 40000 NfL (pg/ml) ** Untreated Paclitaxel Paclitaxel + **** 0 20 40 60 80 100 % Axonal Degeneration Untreated Paclitaxel Paclitaxel + **** **** 0 20 40 60 80 100 % Axonal Degeneration Rotenone Rotenone + Untreated ** *** 0 20 40 60 80 100 % Axonal Degeneration Uncut Cut **** **** In vitro Assay in Primary DRG Neurons ** p< 0.01; *** p <0.001; **** p < 0.001; ANOVA with Bonferroni post-hoc Rotenone Rotenone + DSRM-XX Untreated Axonal cut Imaging field Traumatic injury Non-traumatic injury Traumatic Chemotherapeutic Mitochondrial Axonal Structure NfL Biomarker *p<0.05; ** p< 0.01; *** p <0.001; **** p < 0.0001; ANOVA with Bonferroni post-hoc Pharmacological SARM1 Inhibition Genetic Inhibition in SARM1 KO Axonal Structure NfL Biomarker Axonal Function SNAP Amplitude 0 1 2 3 4 5 6 7 8 9 0 10 20 30 0 2 4 6 8 Time (h) NAD (ng / 100,000 cells) cADPR NAD cADPR (ng / 100,000 cells) ADPR -20 -10 0 10 20 30 40 50 60 70 80 90 100 110 120 % SARM1 activity DMSO 0.03 X 0.3 X 3 X 30 X Blank DSRM-XX Biochemical SARM1 Assay Cell-based DRG Axotomy Assay SARM1 produces cADPR after axotomy SARM1 Inhibitors Prevent cADPR Increase Disarm’s Small Molecules Inhibit SARM1 0 5 10 cADPR (ng / 100,000 cells) 1 X 10 X 0.1 X 0 Cut Uncut SARM1 Pathway NAM NMN NAD + NAMPT NMNAT SARM1 NAM + ADPR/cADPR NAD + cleaves into ADPR/cADPR 6. SARM1 Inhibitor Protects Axons in vivo After Sciatic Nerve Transection Disarm’s small molecule inhibitors phenocopy SARM1 KO DSRM-XX DSRM-XX DSRM-XX DSRM-XX DSRM-XX DSRM-XX DSRM-XX DSRM-XX 0 1000 2000 3000 4000 Plasma NfL (pg/ml) Naive Vehicle DSRM-XX Low DSRM-XX High ** ** **** ** 0 2000 4000 6000 Plasma NfL pg/ml WT WT SARM1 HET SARM1 KO Paclitaxel Vehicle **** ** **** 0 50 100 150 200 250 SNAP amplitude (µV) WT WT SARM1 HET SARM1 KO Paclitaxel Vehicle **** * **** *** 0 2000 4000 6000 Plasma NfL (pg/ml) ** ** Vehicle Vehicle DSRM-XX Low DSRM-XX High Paclitaxel 0 50 100 150 SNAP Amplitude (µV) ** ** Vehicle Vehicle DSRM-XX Low DSRM-XX High Paclitaxel 0 200 400 600 1800 2000 Plasma NfL pg/ml WT SARM1 KO ** ** Naïve SARM1 HET ** **

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Page 1: Raul Krauss*, Todd Bosanac, Thomas Engber, Rajesh Devraj ...€¦ · Small Molecule Inhibitors of SARM1 Prevent Axonal Degeneration in vitro and in vivo Raul Krauss*, Todd Bosanac,

Small Molecule Inhibitors of SARM1 Prevent Axonal Degeneration in vitro and in vivoRaul Krauss*, Todd Bosanac, Thomas Engber, Rajesh Devraj, Robert HughesDisarm Therapeutics, Cambridge, Massachusetts 02139, USA

3. A Proprietary Screening Platform Identified Small Molecule SARM1 Inhibitors

7. SARM1 Inhibitors Prevent Neuropathy in vivo in a Paclitaxel CIPN Model

Axonal degeneration is an early and ongoing event that causes disability anddisease progression in many neurodegenerative disorders of the central,peripheral, and ocular nervous systems, including multiple sclerosis, ALS,peripheral neuropathies, and glaucoma. SARM1 is the central driver of anevolutionarily conserved program of axonal degeneration downstream ofinflammatory, mechanical, metabolic, or chemical insults to the axon.SARM1 contains an intrinsic NADase enzymatic activity essential for its pro-degenerative functions, making it a compelling therapeutic target to treatneurodegeneration characterized by axonopathy.Disarm has developed a high-content screening platform and identifiedproprietary drug-like small molecule inhibitors of SARM1. These inhibitorsprotect rodent and human axons in vitro from mechanical,chemotherapeutic and mitochondrial damage. In sciatic nerve transection,SARM1 inhibitors prevent increases in plasma NfL, a clinically accessiblebiomarker of axonal degeneration. In a paclitaxel model of chemotherapy-induced peripheral neuropathy (CIPN) SARM1 inhibitors protect axonalstructure (plasma NfL) and function (SNAP amplitude).This is the first demonstration that pharmacological inhibition of SARM1 canreproduce the axonal protective phenotype observed in SARM1 knockoutmice. The availability of SARM1-dependent biomarkers of axonaldegeneration enables rapid translation of SARM1 inhibitors from discoveryto the clinic. SARM1 inhibitors have the potential to prevent axonaldegeneration in peripheral and central axonopathies and provide atransformational disease-modifying treatment for these disorders.

1. SARM1 Drives Rapid NAD+ Loss Leading to a Bioenergetic Crisis and Axonal Degeneration

Triggers Diseases

Axonal Degeneration Glaucoma

Multiple sclerosis

CIPN

Neurodegenerative (PD, ALS)

Peripheral neuropathies (diabetic, CMT)

CNS, Eye PNS

SARM1

Immuno/inflammatory

Metabolic / Toxins

Trauma

Mitochondrial / Other

Intraocular pressure

2. SARM1 - The Central Driver of Axonal Degeneration in Neurological Diseases

4. SARM1 Inhibitors Protect from Mechanical, Chemical and Mitochondrial InsultsDisarm’s small molecule inhibitors phenocopy SARM1 KO in primary DRG

5. SARM1 Inhibitors Protect Human AxonsHuman IPSC-derived motor neurons

Inhibitors from multiple chemical series inhibit SARM1 NADase

Disarm’s small molecule inhibitors phenocopy SARM1 KOPrevent increase of axonal structure biomarker plasma NfL and functional axonal conduction

Control Cut Cut + DSRM-XX Axonal Fragmentation

Uncut Cut Cut +Series 1

0

20

40

60

80

100

% A

xona

l Deg

ener

atio

n

********

Pharmacological SARM1 InhibitionGenetic Inhibition in SARM1 KO

** p< 0.01; **** p < 0.0001; ANOVA with Bonferroni post-hoc

Conclusions§ Disarm has advanced a proprietary R&D platform to discover

small molecule inhibitors of SARM1, the central driver of axonal degeneration

§ We are providing the first demonstration that Disarm’s novel small molecule SARM1 inhibitors reproduce the axonal protection phenotype seen in SARM1 knockout. Disarm’scompounds: • Protect axons in vitro from multiple pathological insults• Protect human iPSC-derived motor axons from traumatic injury• Prevent axonal degeneration and preserve axonal function in vivo in a

rodent model of chemotherapy-induced peripheral neuropathy (CIPN)

Disarm is developing small-molecule SARM1 inhibitors for patients with neurological diseases such as MS, ALS and CIPN

CutUntreated Cut + DSRM-XX Axonal Fragmentation

PaclitaxelUntreated Paclitaxel + DSRM-XX Axonal Fragmentation

Axonal Fragmentation NfL Biomarker

NfL Biomarker

NfL Biomarker

0

2000

4000

6000

8000

10000

12000

NfL

(pg

/ml)

Untreated Rotenone Rotenone +Series 1

**** ****

0

2000

4000

6000

8000

10000

NfL

pg/

ml

**

Uncut Cut Cut + Series 1

***

0

10000

20000

30000

40000

NfL

(pg

/ml)

**

Untreated Paclitaxel Paclitaxel +Series 1

****

0

20

40

60

80

100

% A

xona

l Deg

ener

atio

n

Untreated Paclitaxel Paclitaxel +Series 1

********

0

20

40

60

80

100

% A

xona

l Deg

ener

atio

n

Rotenone Rotenone +Series 1

Untreated

*****

0

20

40

60

80

100

% A

xona

l Deg

ener

atio

n

Uncut Cut Cut +Series 1

********

In vitro Assay in Primary DRG Neurons

** p< 0.01; *** p <0.001; **** p < 0.001; ANOVA with Bonferroni post-hoc

Rotenone Rotenone + DSRM-XXUntreated

Axonal cut

Imaging field Traumatic injury

Non-traumatic injury

Trau

mat

icCh

emot

hera

peut

icM

itoch

ondr

ial

Axon

al S

truc

ture

NfL

Bio

mar

ker

*p<0.05; ** p< 0.01; *** p <0.001; **** p < 0.0001; ANOVA with Bonferroni post-hoc

Pharmacological SARM1 InhibitionGenetic Inhibition in SARM1 KO

Axon

al S

truc

ture

NfL

Bio

mar

ker

Axon

al F

unct

ion

SNAP

Am

plitu

de

0 1 2 3 4 5 6 7 8 90

10

20

30

0

2

4

6

8

Time (h)

NAD

(ng

/ 100

,000

cel

ls) cADPRNAD

cADPR

(ng / 100,000 cells)

ADPR

0 .1 1 1 01 0 0

-2 0-1 0

01 02 03 04 05 06 07 08 09 0

1 0 01 1 01 2 0

T im e d e p e n d e n t in h ib it io n o f '1 2 9 65 µ g /m L N R K 1 -H E K 2 9 3 T + E V 5 4 6 7

5 µ M N A D + , 0 - 2 h p r e in c u b a t io n , 1 2 0 m in a t R T

c (to o l c m p d ) [µ M ]

% S

AR

M1

ac

tiv

ity

1 % D

MS O

w /o ly

sa te

S u b s tra te c o m p e t it io n o f '1 2 9 65 µ g /m L N R K 1 -H E K 2 9 3 T + E V 5 4 6 7

7 5 µ M N A D + , 2 h p r e in c u b a t io n , 1 2 0 m in a t R T

DMSO 0.03 X 0.3 X 3 X 30 X BlankDSRM-XX

Biochemical SARM1 Assay Cell-based DRG Axotomy AssaySARM1 produces cADPR after axotomy SARM1 Inhibitors Prevent cADPR IncreaseDisarm’s Small Molecules Inhibit SARM1

0

5

10

DSRM-Series 1

cAD

PR (n

g / 1

00,0

00 c

ells

)

1 X 10 X0.1 X0

Cut

Uncut

SARM1 Pathway

NAM

NMN

NAD+

NAM+ADPR

cADPR

NAMPT

NMNAT

SARM1

?

NAM + ADPR/cADPR

NAD+ cleaves into ADPR/cADPR

6. SARM1 Inhibitor Protects Axons in vivo After Sciatic Nerve Transection Disarm’s small molecule inhibitors phenocopy SARM1 KO

DSRM-XX

DSRM-XX DSRM-XX

DSRM-XX DSRM-XX

DSRM-XXDSRM-XX

DSRM-XX

0

1000

2000

3000

4000

Plas

ma

NfL

(pg/

ml)

Naive Vehicle DSRM-XXLow

DSRM-XXHigh

**

******

**

0

2000

4000

6000

Plas

ma

NfL

pg/

ml

WT WT SARM1HET

SARM1KO

PaclitaxelVehicle

******

****

0

50

100

150

200

250

SNA

P am

plitu

de (µ

V)

WT WT SARM1HET

SARM1KO

PaclitaxelVehicle

*****

*******

0

2000

4000

6000

Plas

ma

NfL

(pg/

ml)

** **

Vehicle Vehicle DSRM-XXLow

DSRM-XXHigh

Paclitaxel

0

50

100

150

SNA

P A

mpl

itude

(µV) ** **

Vehicle Vehicle DSRM-XXLow

DSRM-XXHigh

Paclitaxel

0

200

400

600

1800

2000

Plas

ma

NfL

pg/

ml

WT SARM1KO

****

Naïve SARM1HET

**

**