An Introduction to

Microarrays

Ellen Wisman

Michigan State University

AFGC

http://AFGC.Stanford.edu/

Uses of Microarrays

RNA Expression profilesDNA profilingComparative genomic hybridizationsTranscription binding mappingSNP mappingMini-sequencing

Cycles 1 through 3:

Number of Customer and Collaborator slides 236

Number of Slides Publicly available in SMD178

Through Cycle 5:

Total Number of Proposals115

Total Number of Customers111

Projected Total Number of Slides408

AFGC experiments40

Proposal Facts

Types of experiments

Thlaspi caerulescens 2%

Types of experiments

45% Genotype comparisons/transgene/antisense

34% Treated plants vs. wild type

8% Studying the effects of pathogens

7% Treatment of mutant

4% Studying development

2% Tissue comparisons

V.S.

88 experiments use Arabidopsis thaliana.

2 experiments use Brassica.

2 experiments use Thlaspi caerulescens.

1 experiment uses Alyssum lesbiacum

Organisms Studied

Arabidopsis 95%

Brassica 2%

Alyssum lesbiacum 1%

Arabidopsis

95%

Principles of array production

In situ oligos synthesis (=directly on the slide) Photolithography, light directed synthesis using a mask, 25-mers (Affymetrix) Ink-jet printing process, 60-mers (Rosetta) Others

Principles of array production

Spotted arrayscDNA clonesESTsGSTs gene specific primersOligonucleotidesGenomic clonesGenomic DNA

cDNA microarrays

Labeled RNA

Array

RNA cy5

RNA cy3

+

cDNA clones

1) Reference

2) Experimental

Hybridize

Expression

Ratio

higher in 1 than 2

> 2

same between 1 and 2

1

lower in 1 than 2

< 0.5

We used cDNA microarrays to study gene expression

Data Analysis & Presentation

Acquisition (e.g. ScanAlyze, GenePix) Input/Storage/Retrieval (Stanford Microarray Database) Analysis/Pattern Recognition/ Visualization (Tree View, Clustering, Self-Organizing Maps, K-means, R, Gene Spring) Interpretation/Annotation Publication/Repository (TAIR, GenBank)

M. Cherry, Stanford University

63.psd

65.psd

66.psd

67.psd

The AFGC array

Microarray Design

>100,000 Arabidopsis ESTs

Compare to each other (BLASTN) then to all Arabidopsis proteins (BLASTX)

Analysis Performed by Rob Ewing, Stanford University

9,200 EST clones from all tissues2,000 EST clones from developing seeds3,000 GSTs, gene specific tags

Former array >11,000 clones

99% of the re-sequenced clones were correct

PCR Products

Classified in:

No bandLow ConcentrationDouble bandSmear

Microarray ControlsAvailable from NASC

Negative/spiking controlsHeterologous sequences spotted either to determine background and non- specific hybridization or to serve as external controls by spiking the corresponding RNA into the labeling reaction (human clones)TransgenesFor quantification of reporter constructs (can also serve as negative controls) (BAR, BT, BASTA, Luciferase.)Positive controlsDilutions of chromosomal DNA

Control spots: Genomic DNA

Arabidopsis Genomic DNA digested with RSA1Spotted at different concentrations

Carryover

Intensity

Data manipulation

Remove flagged spotsRemove spots with bad quality defined as % of pixels 1.5% above background

Excel

Access

Other commercial available programs

Normalization = Adjust the signal intensities for each channel to make the two channels comparable

Why Normalization

0

200

400

600

800

1000

1200

2

2.75

3.5

4.25

5

5.75

6.5

7.25

8

8.75

9.5

10.3

11

cy3

cy5

Log of Intensities

Data Distribution before and after Normalization

Number of clones

0

200

400

600

800

1000

1200

1400

-3

-2.5

-2

-1.5

-1

-0.5

0

0.5

1

1.5

2

2.5

3

cy3

cy5

Distribution of ratios

0

500

1000

1500

2000

-3

-2.8

-2.6

-2.4

-2.2

-2

-1.8

-1.6

-1.4

-1.2

1

1.2

1.4

1.6

1.8

2

2.2

2.4

2.6

2.8

3

Number of clones

Ratios

2x

2x

Fold changeNumber of clones>1.81104>1.9901>2.0727>2.1596>2.2503

What is significant

Identification of false positives in slides hybridized with identical RNAs in both channels

2-foldclassSlide 46aSlide 329Slide 585bSlide 1140Slide 2188cSlide 6365

(I) Intensities

(II) Ratios (M) vs. Intensities (A)

(III) Spatial Ratios

Slide 4, class (a)

Slide 4, class (a)

Slide 4, class (a)

Slide 6, class (c)

Slide 6, class (c)

Slide 6, class (c)

1

10

100

1000

10000

-3

-2.8

-2.6

-2.4

-2.2

-2

-1.8

-1.6

-1.4

-1.2

1.2

1.4

1.6

1.8

2

2.2

2.4

Number of clones (log scale)

Ratio

Frequency of false positives among 6 slides

0%

20%

40%

60%

80%

100%

A3/A4

A7/A8

A5/A6

Slide pairs

Reproducible (% clones in final set)

Non-reproducible

0%

10%

20%

30%

40%

50%

60%

70%

80%

0

2

4

6

8

Number of slides

Worst pair to best pair

Best pair to worst pair

Percentage of

Non-reproducible spots

A 2-fold cutoff yields 25-35% non-reproducible that can be removed following multiple replicates

R. Gutierrez

Repetitions

How many repetitions?Minimum is a technical repetition (dye swap)Recommended at least one other biological repetitionExperimental considerations, small changes need more repetitions

Uses of Microarrays

RNA Expression profiles

Type 1: Direct comparisons two different RNAs

Type 2: Multiple comparisons or RNA, via common reference

Type 2: Multiple comparisons

Use of a common reference allows to compare experiments directlyDirect comparison of many different growth conditions or tissues Time course

DNA as common referenceHybridizes equally to each spotConsistent between slidesUnlimited supply

Distribution of intensities of genomic DNA

1400

1600

1800

0.2

0.8

1.4

2

2.6

3.2

3.8

4.4

5

5.6

6.2

6.8

7.4

8

8.6

9.2

9.8

10.4

11

11.6

12.2

RNA intensities

DNA intensities

Relative intensities

No. Clones

High intensities clones4x stdev6x stdevchloroplast5042mitochondrial52ribosomal2416repetitive sequence21multigene families499single genes548

Identification of low intensity spots

Low intensity spots include:

defects in printing poorly amplified clones

0

0.4

0.2

0.6

Relative Intensities

Comparison of common reference vs Direct comparison

6 slides:

Time 0 hr- Time12 hrs

Time 0 hr - Common Reference

Time 12 hrs- Common Reference

Direct Ratio

Ratio via common ref

Comparison of direct vs DNA as reference

Direct ratio (log)

via DNA ratio (log)

Ratios correlate well for higher values, smaller differences may not be detected in type II experiments

Consistent trends between heterologous species

Conserved Genes Expressed Preferentially in Shoot Apices

Conserved Genes Expressed Preferentially in Leaves

D. Horvath

Sheet1

clonearaba 1araba 2spurge 1spurge 2wild oat 1wild oat 2poplar 1poplar 2function

100C6T70.5380.451(AC005824) 60S ribosomal protein L10A [Arabidopsis thaliana]

102B12T70.410.444

103A13T70.330.4350.5986730.157797GLYCINE-RICH RNA-BINDING PROTEIN 7

103B2XP0.4050.472

103C8T70.3530.482probable 60S ribosomal protein L15 [Picea mariana]

103I6XP0.6030.464

103M21T70.3548070.407088(X98189) peroxidase ATP1a [Arabidopsis thaliana]

103P2T70.3680.473

103P4T70.5120.46

104A15T70.1940.404

104B13XP0.3030.444

104E17T70.6037730.651282

104E7XP0.627840.446808

104H21T70.6285710.616216serine/threonine protein kinase [Arabidopsis thaliana]

104H9T70.4020.448

104J23T70.3350.397

104K22T70.6430.517(AC006081) unknown protein [Arabidopsis thaliana]

104L8T70.3980.4750.3133890.1343990.3440350.411518Tubulin beta-2 chain - soybean

104M15XP0.5769940.494942

104O1T70.5630.481

104P22XP0.6230.422

105A10T70.4220.615

105A18T70.387160.132024(Z97335) adenosylhomocysteinase [Arabidopsis thaliana]

105F8T70.4890.43860S RIBOSOMAL PROTEIN L5

105H14T70.3370.078(X97314) cdc2MsC [Medicago sativa]

105I18XP0.4130.408(AL021961) Phosphoglycerate dehydrogenase - like protein [Arabidopsis thaliana]

105K17XP0.50.567CELL DIVISION PROTEIN FTSZ CHLOROPLAST HOMOLOG PRECURSOR

105M9T70.4680.588

105O22T70.6090.566(AC007504) Unknown Protein [Arabidopsis thaliana]

106D14T70.5790.608(AF085279) hypothetical EIF-2-Alpha [Arabidopsis thaliana]

106K8T70.6310.581(AC007017) unknown protein [Arabidopsis thaliana]

106O3XP0.5120.555

107G2T70.1846460.07979(X98189) peroxidase ATP1a [Arabidopsis thaliana]

107I23T70.3990.397GLYCINE-RICH RNA-BINDING PROTEIN 7

107K20T70.3547050.657786UDP-glucose dehydrogenase [Glycine max]

108A18T70.5040.501(AC005287) Hypothetical protein [Arabidopsis thaliana]

108B11T70.2330.261(AB006778) vegetative storage protein [Arabidopsis thaliana]

108C4T70.5560.631(AL023859) putative prolyl-trna synthetase [Schizosaccharomyces pombe]

108D19T70.260.249(AL096882) drought-inducible cysteine proteinase RD21A precursor-like protein [Arabidopsis thaliana]

108F1T70.460.524

108I10XP0.5495540.434216

108K1XP0.5640.615

108K21T70.1948840.0559680.0931280.2426490.6395870.362351TUBULIN BETA-8 CHAIN

108M21T70.6350.5

108N16XP0.5060.593(AC004680) unknown protein [Arabidopsis thaliana]

108N4T70.483050.271052

108O17XP0.4350.577(AL035539) putative pollen allergen [Arabidopsis thaliana]

109M7T70.5871410.636435(AC006921) unknown protein [Arabidopsis thaliana]

110A5T70.5710.532

110B11XP0.5413790.61151

110B1XP0.6090.61

110D1T70.5730.621chaperonin containing TCP1, subunit 7 (eta); CCT-eta

110E17T70.5913040.664451

110H19XP0.5415010.663265predicted OR23 protein of unknown function [Arabidopsis thaliana]

110H9T70.4230.4

110I4T70.3720.41similar to acidic ribosomal protein p1 [Arabidopsis thaliana]

110J3T70.3247410.470725Strong similarity to Picea histone H2A (gb|X67819). ESTs gb|ATTS3874,gb|T46627,gb|T14194 come from this gene. [Arabidopsis thaliana]

110K22XP0.6396640.614127

110L7T70.328660.172254

110N9T70.6585660.588724

110O22XP0.4090.496(AC007071) 40S ribosomal protein; contains C-terminal domain [Arabidopsis thaliana]

110P7T70.2670.3290.4055460.564705F22O13.34 [Arabidopsis thaliana]

111A23XP0.4650.454

111D10XP0.5610.620.6638440.594795

111G1T70.6106760.548174

111G9T70.5970.525

111H19T70.5190.566

111N8T70.4380.52

111O21XP0.4920.637

111P6T70.1410.214PERIAXIN

113014XP0.4530.46

113D17T70.4880230.560209(AL021749) putative protein [Arabidopsis thaliana]

113D5T70.1680.301

113F6XP0.5030.581

113H12T70.5070.53(Z97341) cysteine proteinase inhibitor like protein [Arabidopsis thaliana]

113I3T70.6090.642

113I4XP0.1760.1880.4431160.2521

113J8T70.5430.575ESTs gb|F13915 and gb|F13916 come from this gene. [Arabidopsis thaliana]

113K17XP0.2390.174

113M6T70.5340.593

113N21T70.6138880.6603770.6648350.488738

113P12T70.1620.118

114A13T70.4460.51(AC005396) putative proline-rich protein [Arabidopsis thaliana]

114A17T70.5833330.556237endoxyloglucan transferase - Arabidopsis thaliana

114A20T70.4780.523

114B22T70.4590.511

114B24T70.650520.664652

114C12T70.3240.534

114C16T70.4830.523(AF150083) small zinc finger-like protein [Arabidopsis thaliana]

114D3XP0.4180.401(D85190) vegetative storage protein [Arabidopsis thaliana]

114F13XP0.4290.626

114G5T70.2380.3130.4373780.428096(AC004684) 60S ribosomal protein L36 [Arabidopsis thaliana]

114H2T70.3847650.663636putative RNA helicase A [Arabidopsis thaliana]

114H6T70.1120.155(Y14573) putative ribophorin I homologue [Hordeum vulgare]

114J15T70.4050.301

114L1T70.631260.4054260.4495820.661581AUTOANTIGEN NGP-1

114O13XP0.5127660.244664(AC006526) putative auxin-responsive protein [Arabidopsis thaliana]

114P12T70.5360.605(AC007659) putative mitochondrial translation elongation factor G [Arabidopsis thaliana]

114P3XP0.3260.388

115F24XP0.290.4320.618050.465109

115F9T70.230.31(AF104328) cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]

115G19T70.5660.647putative copper/zinc superoxide dismutase copper chaperone [Arabidopsis thaliana]

115IJ1T70.6550.538(AJ001342) Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]

115J14XP0.3440.403

115L17T70.4560.6070.3507270.4742750.400530.619514

115L20XP0.4680.647

115M22T70.5414440.648287GLUTAMATE--CYSTEINE LIGASE PRECURSOR (GAMMA-GLUTAMYLCYSTEINE SYNTHETASE) (GAMMA-ECS) (GCS)

115N8T70.3139250.130706(X98189) peroxidase ATP1a [Arabidopsis thaliana]

115O2T70.4590.4670.6157930.58031940S RIBOSOMAL PROTEIN S19

116G6XP0.2660.28

116J23T70.5880.625(AL021687) cytochrome P450 [Arabidopsis thaliana]

116L17T70.5409840.384218ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR

117B22T70.170.181(AL078470) glycine-rich protein like [Arabidopsis thaliana]

117B5T70.3982550.568627(AC000107) F17F8.27 [Arabidopsis thaliana]

117F9XP0.1480.157

117G18T70.3650.391(Y14851) DAL1 protein [Arabidopsis thaliana]

117G2T70.4390.412

117G9T70.6032020.543552117G9T7

117H23T70.421940.301675

117I9T70.3290.362

117J11XP0.0923070.560283ESTs gb|ATTS1236,gb|T43334,gb|N97019,gb|AA395203 come from this gene. [Arabidopsis thaliana]

117J22T70.6124590.61874

117J5T70.4887730.443438(U93215) unknown protein [Arabidopsis thaliana]

117L20T70.60.598(AL035527) subtilisin proteinase-like [Arabidopsis thaliana]

117P20T70.2806810.1213770.2327550.442629(AC007184) putative histone H2B [Arabidopsis thaliana]

118A5T70.6290.483

118C2T70.4030.419RUBISCO SUBUNIT BINDING-PROTEIN ALPHA SUBUNIT PRECURSOR (60 KD CHAPERONIN ALPHA SUBUNIT) (CPN-60 ALPHA)

118D15T70.6210.574

118F7T70.6620990.404758

118F7T70.3260.352

118G3T70.150.218(AL078467) putative protein [Arabidopsis thaliana]

118J10T70.4530.429TRANS-CINNAMATE 4-MONOOXYGENASE (CINNAMIC ACID 4-HYDROXYLASE) (CA4H) (C4H) (P450C4H) (CYTOCHROME P450 73)

118J2T70.3670.4080.5329270.663865GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN (WD-40 REPEAT AUXIN-DEPENDENT PROTEIN ARCA)

118K4T70.6227540.260606

119B15T70.4087130.617647glossy1 homolog [Oryza sativa]

119C19T70.4270.422

119E17T70.309820.500970.2729930.488056(AC007184) putative histone H2B [Arabidopsis thaliana]

119E6T70.6130.618

119H2T70.4230.548GMP SYNTHASE [GLUTAMINE-HYDROLYZING] (GLUTAMINE AMIDOTRANSFERASE) (GMP SYNTHETASE)

119H4T70.6420.637biotin carboxylase subunit [Arabidopsis thaliana]

119J1XP0.4230.445

119K22T70.5870390.4375

119K22T70.4430.441

119K7T70.350.4060.5584190.307884(AC006260) 60S ribosomal protein L12 [Arabidopsis thaliana]

119L1T70.2615380.319587

119M17T70.4444810.220779

120C16T70.3970.598(AL021687) putative protein [Arabidopsis thaliana]

120C9T70.5010640.2312990.2981490.35631360S RIBOSOMAL PROTEIN L5

120F17T70.4951670.489246GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC

120G20T70.6510.653CATALASE 3

120H12T70.4830.642120H12T7

120H15T70.60.581similar to acidic ribosomal protein p1 [Arabidopsis thaliana]

120J8T70.3977740.309375L-ascorbate peroxidase (EC 1.11.1.11) precursor - Arabidopsis thaliana (fragment)

120K16XP0.3350.347(AJ001342) Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]

120K5T70.4476740.042016(AJ223804) 2-oxoglutarate dehydrogenase, E3 subunit [Arabidopsis thaliana]

120M13T70.5383610.6

120M18T70.4860.563(AJ010458) RNA helicase [Arabidopsis thaliana]

120O24T70.2940.3980.5635970.413713(AF144752) 40S ribosomal protein S7 homolog [Brassica oleracea]

121B23T70.4910.584(AL035538) putative protein [Arabidopsis thaliana]

121C4T70.5480.61DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KD SUBUNIT PRECURSOR (OLIGOSACCHARYL TRANSFERASE 48 KD SUBUNIT) (DDOST 48 KD SUBUNIT) (OST5OP)

121D14T70.4250.508protein kinase C inhibitor - maize

121F4T70.6459190.615503similar to nascent polypeptide associated complex alpha chain [Arabidopsis thaliana]

121G17T70.5562630.643678Putative protein kinase [Arabidopsis thaliana]

121G24T70.1130.177(D38125) EREBP-4 [Nicotiana tabacum]

121G2T70.5580.466(AF085279) hypothetical Cys-3-His zinc finger protein [Arabidopsis thaliana]

121H2T70.6190.60440S RIBOSOMAL PROTEIN S23 (S12)

121J4T70.5630.621

121N24T70.6050.648

121O1XP0.4345540.648221

121O9T70.3790.462(AL096860) 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana]

122F7XP0.3930.428

122G12T70.3550.525

122H24T70.3790.484similar to glycosyl hydrolases family 9 (PFam:glycosyl_hydro5.hmm, score: 100.70) [Arabidopsis thaliana]

122H6T70.4770.426GLYCINE-RICH RNA-BINDING PROTEIN 7

122I20XP0.2760.282(AL035605) putative protein [Arabidopsis thaliana]

122L12T70.6181680.642156vesicle-associated membrane protein 7B; synaptobrevin 7B [Arabidopsis thaliana]

122M9T70.6117640.603603dehydroquinase shikimate dehydrogenase - Common tobacco

122N17T70.6030.587Similar to myb-related transcription factor (THM27) gb|X95296 from Solanum lycopersicum. ESTs gb|T42000, gb|T04118, gb|AA598042, gb|AA394757 and gb|AA598046 come from this gene. [Arabidopsis thaliana]

122N18T70.2220.339GLUTATHIONE S-TRANSFERASE PM24 (24 KD AUXIN-BINDING PROTEIN) (GST CLASS PHI)

122N1T70.4970.626ubiquitin / ribosomal protein CEP52 - Arabidopsis thaliana

122O9T70.4360.438(AC007127) unknown protein [Arabidopsis thaliana]

123A19T70.3820.564

123A1XP0.4276330.40679526S PROTEASOME REGULATORY SUBUNIT S5A (MULTIUBIQUITIN CHAIN BINDING PROTEIN)

123B21T70.6186790.523217

123B4T70.2310.294(AL022140) pectinesterase like protein [Arabidopsis thaliana]

123C17T70.2970.364(Z81042) similar to Yeast hypothetical protein YEY6 like; cDNA EST yk206h5.3 comes from this gene; cDNA EST yk206h5.5 comes from this gene; cDNA EST yk303h1.3 comes from this gene; cDNA EST yk303h1.5 comes from this gene; cDN...

123D15XP0.5170.5740.6418280.447752No definition line found [Arabidopsis thaliana]

123D17XP0.5490.6HMG-CoA synthase [Arabidopsis thaliana]

123H20T70.2390.317

123H22T70.3530.4460S RIBOSOMAL PROTEIN L21

123J17T70.5060.602(AC007659) putative mitochondrial translation elongation factor G [Arabidopsis thaliana]

123L22T70.4780530.422333(AC006201) 60S ribosomal protein L2 [Arabidopsis thaliana]

123M18T70.3510.589(AC007591) Contains PF|00561 alpha/beta hydrolase fold. [Arabidopsis thaliana]

123M4T70.5490.591(AC007168) putative beta-hydroxyacyl-ACP dehydratase [Arabidopsis thaliana]

123N22T70.4340.382(Y18227) blue copper binding-like protein [Arabidopsis thaliana]

123N8T70.5620.525xyloglucan endotransglycosylase-related protein XTR-2 - Arabidopsis thaliana

123O10T70.2470230.114312histone H3 [Triticum aestivum]

123O14T70.4320.499BETA-GALACTOSIDASE PRECURSOR (LACTASE) (EXO-(1-->4)-BETA-D-GALACTANASE)

123O20T70.5678870.382668flavanone 3-hydroxylase [Arabidopsis thaliana]

124A5XP0.6523220.430924

124J18XP0.3610.36960S RIBOSOMAL PROTEIN L37A

124P16T70.2860.355

125B10T70.6549060.662883

125C5T70.3930.586

125D20XP0.2460.4020.1353870.386363125D20XP

125G4XP0.6477130.444903

125H13T70.4010.533HEAT SHOCK 70-RELATED PROTEIN 1, MITOCHONDRIAL PRECURSOR

125I24T70.3343250.489932GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC

125J18T70.5850.584(AL035709) phosphoenolpyruvate carboxykinase (ATP)-like protein [Arabidopsis thaliana]

125J6T70.5320.58F17L21.19 [Arabidopsis thaliana]

125K20T70.3850.485

125O6XP0.2830.442

126B22T70.3927320.333746HISTONE H3.2, MINOR

126C9T70.2920.575

126G22T70.340.392(Y14851) DAL1 protein [Arabidopsis thaliana]

126J12XP0.4766140.317066ACTIN 71

126J22XP0.4231210.605932

126L22T70.5840.533(X78116) Acetoacetyl-coenzyme A thiolase [Raphanus sativus]

126L8T70.6340.595

126M5T70.6290.598

126O20T70.1360.283(AL022347) serine/threonine kinase-like protein [Arabidopsis thaliana]

127B23XP0.4660.632

127E19T70.2440.38

127H15T70.0660.04(AB015316) MAP kinase kinase 5 [Arabidopsis thaliana]

127K23T70.5994250.598805gamma tonoplast intrinsic protein 2 [Arabidopsis thaliana]

128B15T70.4714710.631818

128B15T70.3730.453

128E12T70.6220.512(AL096860) 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana]

128E23T70.5316780.30893Similar to 60S ribosome protein L19; coded for by A. thaliana cDNA T04719; coded for by A. thaliana cDNA H36046; coded for by A. thaliana cDNA T44067; coded for by A. thaliana cDNA T14056; coded for by A. thaliana cDNA R90691 [Ara...

128G19XP0.3970.517

128I6T70.654410.269018ENOLASE (2-PHOSPHOGLYCERATE DEHYDRATASE) (2-PHOSPHO-D-GLYCERATE HYDRO-LYASE)

128L13T70.4370.413

128L4XP0.5220.499

128L7T70.638830.61413AFT protein [Arabidopsis thaliana]

129C6XP0.6080.531IAA18 [Arabidopsis thaliana]

129D22T70.5850.653lcl|prt_seq No definition line found [Arabidopsis thaliana]

129I7T70.6090.59

129L3XP0.5160.516(AC007069) putative purple acid phosphatase [Arabidopsis thaliana]

129L9T70.3770.3plantacyanin [Arabidopsis thaliana]

129N8T70.2150.299replication protein A1 [Oryza sativa]

129P9T70.3602620.110958

130B12T70.4260.4630.3169440.1157840.1904020.2615580.4996260.478513(AF019147) cysteine proteinase Mir3 [Zea mays]

130B24T70.3640.373(AJ012215) GAL83 protein [Solanum tuberosum]

130D21T70.40.546(AL022023) plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana]

130N9T70.6594840.288485(D26609) transmembrane protein [Arabidopsis thaliana]

131G1T70.6090.652calreticulin [Arabidopsis thaliana]

131G7XP0.3370.271(AF141661) AtHVA22c [Arabidopsis thaliana]

131J16T70.3570.345GLYCINE-RICH RNA-BINDING PROTEIN 7

131L19T70.6504240.599108(AL080237) putative protein [Arabidopsis thaliana]

132A9T70.6280.573(AC007067) T10O24.10 [Arabidopsis thaliana]

132C8T70.6645630.44192

132D1T70.6069310.24029560S RIBOSOMAL PROTEIN L39

132D1T70.2880.38460S RIBOSOMAL PROTEIN L39

132E19XP0.4480.473

132P2T70.4120.421jasmonate inducible protein isolog [Arabidopsis thaliana]

133C24T70.6070.64(Y12576) histone H2B [Arabidopsis thaliana]

133D24T70.626760.430656zeaxanthin epoxidase precursor - curled-leaved tobacco

133M13T70.330.457

134B20T70.5120.529(Y14251) glutathione S-transferase [Arabidopsis thaliana]

134C20T70.5380.454(AL080254) reticuline oxidase-like protein [Arabidopsis thaliana]

134D21T70.3470.408(AL035394) putative major latex protein [Arabidopsis thaliana]

134F5XP0.1110.087(AF144389) thioredoxin-like 3 [Arabidopsis thaliana]

134I13XP0.2760.283

134L16XP0.4590.51unknown protein [Arabidopsis thaliana]

134L19T70.5402980.619047

134M17T70.5715140.541666CELL DIVISION CYCLE PROTEIN 48 HOMOLOG

134N2T70.4281760.51913PLASMA MEMBRANE INTRINSIC PROTEIN 2A

135B9T70.4154410.197802

135E2XP0.2117690.106413

135K12T70.6067920.565275calcium-dependent protein kinase [Fragaria x ananassa]

136L2T70.4890.65

137I1XP0.60.597

137L9T70.2980.273

138A15T70.2380.353(AL035440) putative dihydrolipoamide succinyltransferase [Arabidopsis thaliana]

138B2T70.4310.457(AJ010818) Cpn21 protein [Arabidopsis thaliana]

138D23T70.5950690.621509BIOTIN SYNTHASE (BIOTIN SYNTHETASE)

138I1T70.353630.240667histone H3 [Triticum aestivum]

139A13T70.5390.567

139G18T70.533850.389598CALNEXIN HOMOLOG PRECURSOR

139I4T70.5803820.513201(AC004044) small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]

139J20T70.3475570.3861860.4835960.436784TUBULIN ALPHA-1 CHAIN

139K3T70.4814810.595238

139O13T70.3840.529

140B14T70.430.495SET PROTEIN

140G21T70.5520.5360.2338380.1057760.1820890.223257

140H17T70.2380.237

140H7T70.5810.496

140I19XP0.2720.334

141F18T70.5770.504PGP224 [Petunia x hybrida]

141F5T70.1750.212

141I21T70.3430.274

141I7T70.5250.3460S RIBOSOMAL PROTEIN L18

141P21T70.6523510.3150620.615380.662369belongs to the cytochrome p450 family [Arabidopsis thaliana]

142C22T70.3180.392

142E11T70.3060.34

142E20T70.5430.659murine mammary tumor integration site 6 (oncogene homolog)

142G21T70.3390.4220.5540020.298708Similar to ribosomal protein L17 gb|X62724 from Hordeum vulgare. ESTs gb|Z34728, gb|F19974, gb|T75677 and gb|Z33937 come from this gene. [Arabidopsis thaliana]

143A21T70.4550.533(AC005310) putative zinc transporter [Arabidopsis thaliana]

143B14T70.4760.318

143B5T70.3930.47140S RIBOSOMAL PROTEIN S23 (S12)

143E9T70.3870.412(AL035440) putative protein [Arabidopsis thaliana]

143G3T70.5870.535

143H15T70.3580.374

144G22T70.4870.582GLYCINE-RICH RNA-BINDING PROTEIN 7

144H18T70.3467410.372173(AC002333) putative glucosyltransferase [Arabidopsis thaliana]

144I8T70.4220.4840.6523630.56232260S RIBOSOMAL PROTEIN L11B (L16B)

144J11XP0.4130.367

144L14T70.5260.434(X98255) transcriptionally stimulated by gibberellins; expressed in meristematic region, and style [Arabidopsis thaliana]

144L3XP0.2270.146F21M12.25 gene product [Arabidopsis thaliana]

144M20XP0.4360.429

145A19T70.5102540.517803

145B17T70.5880.6250.6383520.66411345643 [Arabidopsis thaliana]

145C23T70.6060.551(AC007087) unknown protein [Arabidopsis thaliana]

146D2T70.5821890.214922(D26609) transmembrane protein [Arabidopsis thaliana]

146E17T70.6260.656(AL035539) putative protein [Arabidopsis thaliana]

146G22T70.5030.222

146H18T70.6430.659

146L15T70.3540.371(AL021961) putative protein [Arabidopsis thaliana]

146O9T70.4930.5(AC004450) putative extensin [Arabidopsis thaliana]

146P9T70.6160.601

147A15T70.6128250.516478PUTATIVE RECEPTOR PROTEIN KINASE TMK1 PRECURSOR

147C20XP0.6275530.5038753-keto-acyl-CoA thiolase 2 [Arabidopsis thaliana]

147F20XP0.5860.525

147F22T70.4830.480.6381880.58466960S RIBOSOMAL PROTEIN L39

147H4T70.5404680.563997PROTOCHLOROPHYLLIDE REDUCTASE PRECURSOR (PCR) (NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE)

147I3T70.360.40760S RIBOSOMAL PROTEIN L37

147J24TM0.5030.568

147P24T70.4810370.574074POLYADENYLATE-BINDING PROTEIN 2 (POLY(A) BINDING PROTEIN 2) (PABP 2)

148H10T70.6350.599

148H3XP0.450.524protein L18 from Thermotoga maritima genome gb|AE001798. ESTs gb|Z35613, gb|T75951, gb|T22182, gb|T45962, gb|H76281 and gb|AI100025 come from this gene. [Arabidopsis thaliana]

148M11T70.6547080.448453(AF123254) MFP2 [Arabidopsis thaliana]

148N24T70.1160.245(AL035356) putative mitochondrial uncoupling protein [Arabidopsis thaliana]

149C22T70.2810.35

149D9T70.590.578(AC007260) 50S Ribosomal protein L13 [Arabidopsis thaliana]

149G13XP0.6510.648

149M9T70.6334020.633182HYPOTHETICAL RAE1-LIKE PROTEIN

150D23T70.5758510.551242(AB012044) plasma membrane aquaporin (PAQ1) [Raphanus sativus]

150E12T70.4740.61

150J2T70.5520.601oleosin, isoform 21K - Arabidopsis thaliana

150K3T70.3950.53360S RIBOSOMAL PROTEIN L22

150O20T70.6095050.515306(AC007727) Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome subunit. EST gb|T76747 comes from this gene.

151A14T70.3910.591

151A15T70.3740.5590.5894170.530869(X99097) peroxidase [Arabidopsis thaliana]

151B13XP0.5890.482

151G14T70.6340490.556804(Z71446) CLC-b chloride channel protein [Arabidopsis thaliana]

151L13XP0.5530.585(U93215) unknown protein [Arabidopsis thaliana]

151O2T70.6459050.586326RAS-RELATED PROTEIN RAB7

153D1T70.450.143clathrin heavy chain [Glycine max]

153E24T70.4360.562(AC006282) 60S ribosomal protein L24 [Arabidopsis thaliana]

153G5XP0.5360.537

153J10T70.5860.63(X98190) peroxidase ATP2a [Arabidopsis thaliana]

154A12XP0.3750.4110.598980.42805760S RIBOSOMAL PROTEIN L33-B (L37B) (YL37) (RP47)

154F15T70.5460.599ribonucleoprotein - Arabidopsis thaliana

154L1T70.3490.343

154O14T70.6161770.659286

154P2T70.3776540.200039GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC

155A2T70.2280.276(X98315) peroxidase [Arabidopsis thaliana]

155A9T70.5878670.533739(AL049481) putative protein [Arabidopsis thaliana]

155E21T70.5870.607tryptophan synthase (EC 4.2.1.20) alpha chain - Arabidopsis thaliana

155G14T70.4970.584(AJ012409) hypothetical protein [Homo sapiens]

156A6XP0.220.292

156B14T70.5684930.37234(AC006577) Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from Mus musculus and contains several PF|00076 RNA recognition motif domains. ESTs gb|T21032 and gb|T44127 come from this gene. [Arabidopsis t...

156B20T70.5020.56660S RIBOSOMAL PROTEIN L4 (L1)

156C18XP0.5870.571(AC005698) T3P18.4 [Arabidopsis thaliana]

156E23T70.4940.518ESTs gb|F13979, gb|AA042648, gb|H77240, gb|T76189, gb|H35952, gb|T22022 and gb|T42279 come from this gene. A similar ORF is present on the opposite strand. [Arabidopsis thaliana]

156F12T70.4960.472(AL022023) plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana]

156F15XP0.1940.135

156F18XP0.4080.513

156I24XP0.310.4

156J20T70.4280.647small nuclear ribonucleoprotein - Arabidopsis thaliana

156K12T70.5270.59(AC006955) unknown protein [Arabidopsis thaliana]

156O1T70.6516540.357705endo-1,4-beta-glucanase [Lycopersicon esculentum]

157F22T70.4510.503(X98315) peroxidase [Arabidopsis thaliana]

157F4T70.3480.378

157L3T70.6055350.480879(AC006577) Belongs to the PF|00657 Lipase/Acylhydrolase with GDSL-motif family. [Arabidopsis thaliana]

157L6XP0.5860.614

157M14XP0.5550.504

158F3XP0.4301690.526427Strong similarity to gb|Z50851 HD-zip (athb-8) gene from Arabidopsis thaliana containing Homeobox PF|00046 and bZIP PF|00170 domains. [Arabidopsis thaliana]

158H18T70.5327160.62241314-3-3-LIKE PROTEIN GF14 CHI

158I5XP0.5362510.488165

158K15XP0.4480.47360S RIBOSOMAL PROTEIN L22

158K2T70.6611130.224118S-ADENOSYLMETHIONINE SYNTHETASE (METHIONINE ADENOSYLTRANSFERASE) (ADOMET SYNTHETASE)

158P16T70.1540.202(AB018441) phi-1 [Nicotiana tabacum]

158P2T70.450.585

159B10T70.2258060.50692UDP-glucose dehydrogenase [Glycine max]

159E8T70.4910.5440.2007770.210499Strong similarity to Picea histone H2A (gb|X67819). ESTs gb|ATTS3874,gb|T46627,gb|T14194 come from this gene. [Arabidopsis thaliana]

159O18XP0.5690.642(AJ007630) oxygenase [Nicotiana tabacum]

160J11T70.4090.654(AJ006771) beta-galactosidase [Cicer arietinum]

160J24T70.540.546GLUTATHIONE S-TRANSFERASE PM24 (24 KD AUXIN-BINDING PROTEIN) (GST CLASS PHI)

160K20T70.55560.354591Similar to 60S ribosome protein L19; coded for by A. thaliana cDNA T04719; coded for by A. thaliana cDNA H36046; coded for by A. thaliana cDNA T44067; coded for by A. thaliana cDNA T14056; coded for by A. thaliana cDNA R90691 [Ara...

160L1T70.4180.4390.3911240.21906260S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)

160L5T70.360.41Similar to ribosomal protein L17 gb|X62724 from Hordeum vulgare. ESTs gb|Z34728, gb|F19974, gb|T75677 and gb|Z33937 come from this gene. [Arabidopsis thaliana]

160M14T70.5720.526(AC006438) unknown protein [Arabidopsis thaliana]

160M3T70.440.421GLUTATHIONE S-TRANSFERASE ERD11 (GST CLASS PHI)

160O10XP0.5390.545

161A12T70.2860.313

161A22T70.2730.339dormancy-associated protein [Arabidopsis thaliana]

161B14M40.3430.441Arabidopsis thaliana glutamate dehydrogenase 2 (GDH2) mRNA, complete cds. [Arabidopsis thaliana]

161C17T70.5340.584

161C1T70.5320.656

161D7XP0.550.656

161E21XP0.6040.589

161F5XP0.3790.4740.1351770.0347820.4732390.5232810.202630.505425(Y12576) histone H2B [Arabidopsis thaliana]

161G15T70.4210.555(AC002336) 40S ribosomal protein S26 [Arabidopsis thaliana]

161G3T70.230.32putative polygalacturonase [Arabidopsis thaliana]

161I22T70.4590.572(AF061519) copper/zinc superoxide dismutase [Arabidopsis thaliana]

161J9T70.5040.61ubiquitin 81-aa extension protein 2 - Arabidopsis thaliana

161K4XP0.4370.55

161M7XP0.6489770.661068

162B20T70.5080.625

162B21T70.1580.195(U78721) putative auxin-regulated protein [Arabidopsis thaliana]

162D22T70.2590.286(X98315) peroxidase [Arabidopsis thaliana]

162F4T70.6040.598(AL049711) putative protein [Arabidopsis thaliana]

162I4T70.4840.567similar to ripening-induced protein, gp|AJ001449|2465015 and major#latex protein, gp|X91961|1107495 [Arabidopsis thaliana]

162J18T70.1210.173(AF002109) putative nematode-resistance protein [Arabidopsis thaliana]

162J3T70.1870.252(D38125) EREBP-4 [Nicotiana tabacum]

162K16T70.4620.507ribosomal protein 30S subunit [Spinacia oleracea]

162M23T70.5913790.513365(Z73942) RAB7C [Lotus japonicus]

162M5T70.1680.278drought-induced protein Di21 - Arabidopsis thaliana

162O16T70.5630.403(D38125) EREBP-4 [Nicotiana tabacum]

162P2T70.6609750.519631cleft lip and palate associated transmembrane protein 1

163B11T70.573570.43217214-3-3-LIKE PROTEIN GF14 PHI

163C6XP0.5259170.495981

163D19T70.5020.640.3343240.557111(U78721) unknown protein [Arabidopsis thaliana]

163H5T70.583530.608786calcium sensor homolog [Arabidopsis thaliana]

163I14T70.3920.475(AL035680) ribosomal protein L14-like protein [Arabidopsis thaliana]

163M14XP0.4840.402

164C1XP0.2230.248

164E15XP0.6592790.451612

164H19T70.3710.412

164J24T70.6230.626(AC000107) F17F8.3 [Arabidopsis thaliana]

164K8T70.4730.491(AF144752) 40S ribosomal protein S7 homolog [Brassica oleracea]

164N12T70.5150.463

165F17T70.4780.554

165H7T70.590.605

165I15T70.120.208(D83025) proline oxidase precursor [Arabidopsis thaliana]

165L23XP0.6544160.606879(AJ010466) RNA helicase [Arabidopsis thaliana]

165L7XP0.5020.559

165M5T70.2820.239

165O21T70.5940.588blue-copper binging protein III [Arabidopsis thaliana]

166D4T70.4170.556

166E22T70.6280.651(AJ012281) adenosine kinase [Zea mays]

166E6T70.6090.594

166N17T70.5550.545

166P4XP0.640.631(AC005489) F14N23.15 [Arabidopsis thaliana]

167A7T70.6617870.626637SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

167E12T70.604070.633822Similar to elongation factor 1-gamma (gb|EF1G_XENLA). ESTs gb|T20564,gb|T45940,gb|T04527 come from this gene. [Arabidopsis thaliana]

167K13T70.3820.543RNA-binding protein cp29 precursor - Arabidopsis thaliana

167M23T70.5820.6340.6145570.1334630.2580350.360217TUBULIN ALPHA-3/ALPHA-5 CHAIN

167N11T70.5978960.54782calcium dependent protein kinase [Vigna radiata]

168A24T70.5060.657(AC005106) T25N20.9 [Arabidopsis thaliana]

168C16T70.450.609

168D3T70.3188880.1511920.548710.34948(X98189) peroxidase ATP1a [Arabidopsis thaliana]

168G8T70.5650.659(AC004005) unknown protein [Arabidopsis thaliana]

168K9XP0.6289960.607517(AC007576) Unknown protein [Arabidopsis thaliana]

168L21T70.2370.202

168N4T70.3620.377(AC002535) 60S ribosomal protein L7A [Arabidopsis thaliana]

169B10T70.5440.543

169D5T70.4760.427biotin carboxyl carrier protein precursor (clone BP4) - rape

169G2XP0.6255290.594542

169G7T70.440.4140.5975550.64471(Z48564) dihydrolipoamide dehydrogenase [Synechocystis PCC6803]

169L7T70.5550.448(X98315) peroxidase [Arabidopsis thaliana]

169O4T70.1049770.352638

170A3T70.0850.0570.2227610.627921(AC006931) En/Spm-like transposon protein [Arabidopsis thaliana]

170C10T70.6347820.5625

170C10T70.3370.312

170D2T70.2440.432(X99097) peroxidase [Arabidopsis thaliana]

170D3T70.5480.515

170E1XP0.6260.613

170F5T70.5970.624

170F9T70.2080.11(D21822) ORF [Lilium longiflorum]

170H21T70.5730.6160.5820350.546152(AF058919) No definition line found [Arabidopsis thaliana]

170L10T70.5230.408(AC002343) cellulose synthase isolog [Arabidopsis thaliana]

170L2T70.4540.609

170M19T70.4890.64(AC007576) initiation factor 5A-4 [Arabidopsis thaliana]

170N12T70.6380570.449683(AL021684) pyridoxal-phosphate-dependent aminotransferase - like protein [Arabidopsis thaliana]

170N19T70.5040.507senescence-associated protein sen1 - Arabidopsis thaliana

170O22T70.4817930.639408(AC006429) unknown protein [Arabidopsis thaliana]

171B4T70.530.494(AC005896) 40S ribosomal protein S5 [Arabidopsis thaliana]

171C18T70.3180.368(AC005698) T3P18.4 [Arabidopsis thaliana]

171E8T70.5220.56860S RIBOSOMAL PROTEIN L9

171H11T70.3470.352RUBISCO SUBUNIT BINDING-PROTEIN ALPHA SUBUNIT PRECURSOR (60 KD CHAPERONIN ALPHA SUBUNIT) (CPN-60 ALPHA)

171H24T70.620.511(AJ002597) membrane-associated salt-inducible protein like [Arabidopsis thaliana]

171L15T70.5930.491(AB024301) RuvB-like DNA helicase TIP49b [Homo sapiens]

171N12T70.5020.426(AL035708) putative protein [Arabidopsis thaliana]

171N13T70.4632450.552447(AJ012571) glutathione transferase [Arabidopsis thaliana]

171N14T70.4510.488(AC007018) 40S ribosomal protein S17 [Arabidopsis thaliana]

171P10T70.4470.544GLUCOSE TRANSPORTER (SUGAR CARRIER)

172A15XP0.3830.444

172B21T70.4120.472(AC006841) putative protein kinase [Arabidopsis thaliana]

172B8T70.0420.101

172C10T70.6370.539(AC004665) unknown protein [Arabidopsis thaliana]

172D6T70.4880.591

172E23T70.480.657

172H17T70.4483830.289537(AC005315) putative expansin [Arabidopsis thaliana]

172J21XP0.5090.48(AC007504) Unknown Protein [Arabidopsis thaliana]

172M14T70.6230.375(U78721) putative proline-rich protein [Arabidopsis thaliana]

172P5T70.3920.421(AC004450) putative protein kinase [Arabidopsis thaliana]

173A24T70.4310.441

173H6T70.3250.46

173I15T70.5260.596(AC004005) unknown protein [Arabidopsis thaliana]

173I5T70.5788210.387478(X98315) peroxidase [Arabidopsis thaliana]

173J23T70.2960.576(AF104328) cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]

173M12T70.5423350.26144

173M22T70.4860.585(AF002109) unknown protein [Arabidopsis thaliana]

173N1T70.5670.638(AL035523) putative Ser/Thr protein kinase [Arabidopsis thaliana]

174D23T70.4610.499

174D8T70.3710.398GLYCINE-RICH RNA-BINDING PROTEIN 7

174E4XP0.3280.393

174J11T70.5904460.4551080.3259380.318093GAST1 protein homolog (clone GASA1)

174J13T70.1550.248(AC005395) putative CCCH-type zinc finger protein [Arabidopsis thaliana]

174K3T70.4570.559(AC005397) eukaryotic translation initiation factor 3 delta subunit [Arabidopsis thaliana]

174L7T70.4620.328

174O23T70.4570.367(AC006053) putative vacuolar ATP synthase proteolipid subunit [Arabidopsis thaliana]

175B17T70.350.39

175B7T70.610.5280.6599230.663717(D30719) ERD15 protein [Arabidopsis thaliana]

175C19T70.1720.282(AL034567) putative protein [Arabidopsis thaliana]

175C1T70.4480.522dihydrolipoylacyltransferase subunit of the branched-chain alpha-keto acid dehydrogenase complex [Arabidopsis thaliana]

175C23T70.1940.395

175F2T70.5757570.553682(AL035523) superoxide dismutase (EC 1.15.1.1) (Fe)(fragment) [Arabidopsis thaliana]

175H22T70.4722330.336295

175H23T70.6130.654Contains similarity to Rhodococcus amidase (gb|D16207). ESTs gb|T20504,gb|H36650,gb|N97423,gb|H36595 come from this gene. [Arabidopsis thaliana]

175K13XP0.460.579

175M11T70.5705760.226176(Z97335) adenosylhomocysteinase [Arabidopsis thaliana]

175M2T70.4860.548

176C8T70.5590.551(AL078470) glycine-rich protein like [Arabidopsis thaliana]

176J3T70.5750.587(AC002333) putative endochitinase [Arabidopsis thaliana]

176L7T70.450.231F17L21.8 [Arabidopsis thaliana]

176N24T70.2510.452

176O10T70.3934180.131788(AL096882) drought-inducible cysteine proteinase RD21A precursor-like protein [Arabidopsis thaliana]

176P16T70.5394580.548639UDP-glucose dehydrogenase [Glycine max]

177A19T70.3650.4870.4853760.497159nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 [Arabidopsis thaliana]

177D15T70.2848640.1429(U97200) cobalamin-independent methionine synthase [Arabidopsis thaliana]

177E24T70.5270.633

177E4T70.2698030.586924

177G4T70.4330.518

177G6T70.3460.37

177H20T70.5279830.270772peptidylprolyl isomerase (EC 5.2.1.8) - Arabidopsis thaliana

177I21T70.5086870.56590814-3-3-LIKE PROTEIN GF14 LAMBDA (14-3-3-LIKE PROTEIN AFT1)

177K12T70.5240.159(AC006403) putative protein kinase [Arabidopsis thaliana]

177K9T70.3930.414

177L7XP0.6302690.632277

177N23T70.4570.5180.1900710.3451850.6214170.5123670.3664450.525573CHALCONE SYNTHASE (NARINGENIN-CHALCONE SYNTHASE) (TESTA 4 PROTEIN)

177N23T70.3690.5250.2224760.4325630.6151480.656804CHALCONE SYNTHASE (NARINGENIN-CHALCONE SYNTHASE) (TESTA 4 PROTEIN)

177O23T70.490.553arabinogalactan-protein [Arabidopsis thaliana]

177P12T70.4780.62(AL078637) HSP90-like protein [Arabidopsis thaliana]

178A11T70.5966150.540503

178A13T70.5651090.550404

178B17T70.3310.41240S RIBOSOMAL PROTEIN S19

178C14T70.3870.462(Z97342) hypothetical protein [Arabidopsis thaliana]

178C24T70.4670.5910.4519770.4809230.6388470.664864TUBULIN ALPHA CHAIN

178D14T70.4880.504berberine bridge enzyme from Arabidopsis thaliana BAC gb|AC004238. This gene

178G17T70.2020.220.26780.219572(AF061519) copper/zinc superoxide dismutase [Arabidopsis thaliana]

178H18T70.5120.305RNA-binding protein cp29 precursor - Arabidopsis thaliana

178I6T70.2930350.535885

178K1XP0.4262630.643377(AL035394) putative polygalacturonase [Arabidopsis thaliana]

178M8T70.3560.645ribosomal protein L23a [Arabidopsis thaliana]

179A13T70.1690.273(U92460) 12-oxophytodienoate reductase OPR1 [Arabidopsis thaliana]

179A21T70.3880.413

179D2T70.390.472

179E3T70.5560.596(AL078637) HSP90-like protein [Arabidopsis thaliana]

179F6T70.4620.384

179H12T70.3520.4570.5809860.22348260S RIBOSOMAL PROTEIN L34

179H15T70.4850.561unknown [Arabidopsis thaliana]

179H19T70.5630.633similar to ripening-induced protein, gp|AJ001449|2465015 and major#latex protein, gp|X91961|1107495 [Arabidopsis thaliana]

179J23T70.6543720.6464720.6079290.48162414-3-3-LIKE PROTEIN GF14 EPSILON

179M1T70.5950.5923-methylcrotonyl-CoA carboxylase precursor [Arabidopsis thaliana]

179O11T70.5580.528(D89341) luminal binding protein [Arabidopsis thaliana]

179P19T70.5380.563ESTs gb|H37208,gb|H36853 come from this gene. [Arabidopsis thaliana]

180A2T70.4843010.486631(D26609) transmembrane protein [Arabidopsis thaliana]

180B2T70.5540.497

180C16T70.1300170.102723

180C16T70.4430.301

180D10T70.2860.438(AC005970) enoyl-ACP reductase (enr-A) [Arabidopsis thaliana]

180L9T70.5283810.561154CELL DIVISION CYCLE PROTEIN 48 HOMOLOG

180M1T70.2890.337biotin carboxyl carrier protein precursor (clone BP4) - rape

180M9T70.3390.271

180N6T70.4730.5190.2948630.1440850.3489320.516388(AL035538) putative protei [Arabidopsis thaliana]

180P7T70.310.454(AJ010474) RNA helicase [Arabidopsis thaliana]

181A7T70.5320.451POLYADENYLATE-BINDING PROTEIN 2 (POLY(A) BINDING PROTEIN 2) (PABP 2)

181B5T70.5790.413

181C13XP0.6440.594

181D20T70.40.4910.5612950.66288360S RIBOSOMAL PROTEIN L38

181F8T70.4570.51

181J1T70.3310.398(AL050351) ribosomal protein S25 [Arabidopsis thaliana]

181J3T70.20.221(AC005171) putative retroelement pol polyprotein [Arabidopsis thaliana]

181K12XP0.5310.52

181K22XP0.6020.333

181M12T70.2960.367

181N8T70.5910.614(AJ131433) selenocysteine methyltransferase [Astragalus bisulcatus]

182A10T70.3290.584

182C14T70.6010.587

182C20T70.3217610.309077SUCROSE SYNTHASE (SUCROSE-UDP GLUCOSYLTRANSFERASE)

182J14XP0.6526850.628418

182N18T70.5950.5370.5838050.31784(AL021961) putative protein [Arabidopsis thaliana]

182N24T70.2880.343

183F22T70.451070.32157814-3-3-LIKE PROTEIN GF14 UPSILON

183G20T70.6420320.64133membrane associated protein [Arabidopsis thaliana]

183I7T70.3760.451(Z97339) hypothetical protein [Arabidopsis thaliana]

183L14T70.280.419(Z84377) xylosidase [Aspergillus niger]

183L8T70.4120860.366875HISTONE H3.2, MINOR

184A23XP0.2720.373

184B14T70.2070.289(AL049659) putative protein [Arabidopsis thaliana]

184C15T70.3420.304

184F12T70.4680.573similar to several small proteins (~100 aa) that are induced by heat, auxin, ethylene and wounding such as Phaseolus aureus indole-3-acetic acid induced protein ARG (SW:32292) [Arabidopsis thaliana]

184G4T70.4480.5940.3274570.247352(AL022023) plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana]

184I17T70.5670.525

184O20T70.5610.579(X78116) Acetoacetyl-coenzyme A thiolase [Raphanus sativus]

184O7T70.1590.311

184P22T70.5730.4890.1848360.0824720.0345430.1475090.6184190.300351TUBULIN ALPHA CHAIN

184P7T70.4750.60.6240690.3363450.3993610.598662ELONGATION FACTOR 1-BETA A1 (EF-1-BETA)

185A20T70.3910.438beta-glucosidase (EC 3.2.1.21) - rape

185A21T70.4340.536

185C20T70.2770.252proteinase inhibitor II - Arabidopsis thaliana

185C8T70.5338580.542392DEHYDRIN ERD10 (LOW-TEMPERATURE-INDUCED PROTEIN LTI45)

185H11T70.5060.374(D83025) proline oxidase precursor [Arabidopsis thaliana]

185H22XP0.60.617

185J24T70.1840.23J8 [Arabidopsis thaliana]

185L20T70.5318810.477084ENOLASE (2-PHOSPHOGLYCERATE DEHYDRATASE) (2-PHOSPHO-D-GLYCERATE HYDRO-LYASE)

185L2T70.5810.6(U78721) 30S ribosomal protein S5 [Arabidopsis thaliana]

185M19T70.0970.208

185N5XP0.6267890.528556

186B18XP0.60.61

186B6T70.4810970.243367(U97200) cobalamin-independent methionine synthase [Arabidopsis thaliana]

186D24T70.2880.4610.560570.434328(AC004684) 60S ribosomal protein L36 [Arabidopsis thaliana]

186E15T70.5538620.653948

186E15T70.5580.497

186E16T70.656030.525821(AC005770) unknown protein [Arabidopsis thaliana]

186F13T70.2620.359

186F14T70.310.312RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN (RIBONUCLEOTIDE REDUCTASE) (R2 SUBUNIT)

186L5T70.5340.592(AL035523) PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT-like [Arabidopsis thaliana]

186N11T70.4540.504(AL021633) predicted protein [Arabidopsis thaliana]

186O2T70.5350.598

187B14T70.4570.456(AC007135) 40S ribosomal protein S14 [Arabidopsis thaliana]

187C23T70.4792930.6580110.4178170.482608CHALCONE SYNTHASE (NARINGENIN-CHALCONE SYNTHASE) (TESTA 4 PROTEIN)

187E8T70.1660.2430.4711640.654929

187F23T70.4420.58860S RIBOSOMAL PROTEIN L9

187F24XP0.2170.347(AC005698) T3P18.6 [Arabidopsis thaliana]

187G14T70.4590.473

187H10T70.5840.632drought-induced protein Dr4 - Arabidopsis thaliana

187I20XP0.6011730.574712

187J22T70.4120.438(AC005698) T3P18.4 [Arabidopsis thaliana]

187K23T70.4970.563(AL078637) HSP90-like protein [Arabidopsis thaliana]

187M6XP0.630.634

187N16T70.310.342187N16T7

188A7T70.652290.358433H+-transporting ATPase (EC 3.6.1.35), vacuolar, 16K chain (clone AVA-P1) - Arabidopsis thaliana

188B11T70.4610.61(AL096882) drought-inducible cysteine proteinase RD21A precursor-like protein [Arabidopsis thaliana]

188E10T70.3356540.239083(D63137) Beta-tubulin [Zinnia elegans]

188E16T70.1788120.3429480.2327170.315164TUBULIN ALPHA-3/ALPHA-5 CHAIN

188E6T70.340.3790.5456630.3807450.3290720.657701

188G14T70.610.532

188H10T70.2640.427(AC002334) mitochondrial chaperonin (HSP60) [Arabidopsis thaliana]

188I11T70.1470.081(U78721) putative auxin-regulated protein [Arabidopsis thaliana]

188I21T70.3480.579PYRUVATE KINASE ISOZYME G, CHLOROPLAST PRECURSOR

189A8XP0.640.544

189F3T70.4330.135dormancy-associated protein [Arabidopsis thaliana]

189G16T70.6647150.653226ATFP1 [Arabidopsis thaliana]

189G20T70.5260.657

189I19XP0.5960.639

189J17T70.5750.569

189N5T70.3710.4070.6457340.339289

189O1T70.5130.52(AJ223316) ribosomal protein L30 [Lupinus luteus]

190A1T70.1730.27

190B4XP0.5540.625

190F10T70.4460.4110.5746150.568687190F10T7

190F4T70.3850.442arabinogalactan-protein [Arabidopsis thaliana]

190G14T70.5830870.588113SUCROSE-PHOSPHATE SYNTHASE 1 (UDP-GLUCOSE-FRUCTOSE-PHOSPHATE GLUCOSYLTRANSFERASE 1)

190I17T70.3540.457similar to GTP-binding protein [Arabidopsis thaliana]

190I22T70.2060.387(X98315) peroxidase [Arabidopsis thaliana]

190P18T70.6413150.465774GTP-BINDING PROTEIN SAR1A

191A15T70.2220.371(AF104328) cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]

191A16T70.3750.383(AF002109) 60S acidic ribosomal protein P0 [Arabidopsis thaliana]

191D5T70.3780.4

191F21T70.5366650.601451

191L8T70.6220.587

192B17T70.4170.4920.6265280.556463(Y09106) transcription factor [Nicotiana plumbaginifolia]

192B18T70.5759260.578446(AC003672) putative small GTP-binding protein [Arabidopsis thaliana]

192G11XP0.5420.4740.4900480.574547

192G17T70.3110.305(AJ131049) hypothetical protein [Cicer arietinum]

192H15T70.5435980.334661ADP,ATP CARRIER PROTEIN 1 PRECURSOR (ADP/ATP TRANSLOCASE 1) (ADENINE NUCLEOTIDE TRANSLOCATOR 1) (ANT 1)

192K6T70.5180.531(AL050398) putative protein [Arabidopsis thaliana]

192N13T70.2316070.440476(AJ133502) hypothetical protein [Nicotiana tabacum]

192N15T70.6110.65

192O7T70.446250.245497Similar to ATP-citrate-lyase [Arabidopsis thaliana]

192P18T70.5530.6560.2300040.14478(AL031854) probable t-complex protein 1, theta subunit [Schizosaccharomyces pombe]

192P1T70.2952050.1190310.2140360.3411270.6494980.543247TUBULIN BETA-5 CHAIN

193C2T70.4710.596(AC007060) Strong similarity to F19I3.7

193G23T70.5050.467

193H24T70.4420050.45381TUBULIN ALPHA CHAIN

193I11T70.4030.561small nuclear ribonucleoprotein polypeptide F

193I3T70.4150.57(AC005698) T3P18.4 [Arabidopsis thaliana]

193J13T70.6090.628

193O8T70.2470.251

193P24T70.2380.1910.4661580.287356HISTONE H2A

194J14T70.4680.4540.5988120.335625(AC006954) unknown protein [Arabidopsis thaliana]

194L2T70.5483870.647435

195C7T70.3260.386CYP94A1 [Vicia sativa]

195F24T70.5320.554Hypothetical protein [Arabidopsis thaliana]

195F3T70.3300150.1454880.1547330.2633560.571710.628816(AC004450) unknown protein [Arabidopsis thaliana]

195G6T70.5140.522(AC005169) 40S ribosomal protein S30 [Arabidopsis thaliana]

196A3T70.6571180.618329

196C15M40.3520.45160S RIBOSOMAL PROTEIN L10A

196C18M40.270.3A_IG002P16.4 gene product [Arabidopsis thaliana]

196F11T70.2660550.632132

196K24T70.6478390.458483(AC003672) putative phragmoplastin [Arabidopsis thaliana]

196M10T70.1990.207(D14550) EDGP precursor [Daucus carota]

197A15M40.4070.424(AC007020) putative WD-40 repeat protein [Arabidopsis thaliana]

197A16M40.5210.43160S RIBOSOMAL PROTEIN L27A

197A20M40.5270.541

197A5M40.6280320.617647(AC000104) ESTs gb|N65789,gb|T04628 come from this gene. [Arabidopsis thaliana]

197E8T70.5830.3840.3724340.635454

197J23T70.4880.47(AL049751) ribosomal protein L13a like protein [Arabidopsis thaliana]

197N9T70.6190.577

197P17T70.5550.498(AC006201) unknown protein [Arabidopsis thaliana]

198D21T70.6050.625

198E9RTM0.4960.468

198F7T70.6594440.631067(D78602) cytochrome P450 monooxygenase [Arabidopsis thaliana]

198H14T70.6470.567

198J10T70.4090.373putative RNA binding protein [Nicotiana tabacum]

198J24T70.5750.657

198M7T70.5520.482DNA-DIRECTED RNA POLYMERASE II 8.2 KD POLYPEPTIDE (RPB10) (RP10) (ABC10)

199A16MRP0.4110.54360S RIBOSOMAL PROTEIN L27A

199C20MRP0.6140.631

199D15T70.4420.471

199O20T70.4280.432(D30719) ERD15 protein [Arabidopsis thaliana]

200A9T70.6370.564

200B1T70.4930.619(AL049862) putative mitochondrial protein [Arabidopsis thaliana]

200D5T70.5170.535NUCLEOSIDE DIPHOSPHATE KINASE I (NDK I) (NDP KINASE I) (NDPK I)

200E11T70.4230.428(AL049480) putative acidic ribosomal protein [Arabidopsis thaliana]

200F14T70.3360.427(AC005169) putative ribosomal protein L28 [Arabidopsis thaliana]

200F24T70.5350.6210.644770.518181

200F4T70.6420.649

200H2T70.6159110.601998PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2 PRECURSOR (PHOSPHO-2-KETO-3-DEOXYHEPTONATE ALDOLASE 2) (DAHP SYNTHETASE 2) (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 2)

200I7T70.410.442EST gb|AA597511 comes from this gene. [Arabidopsis thaliana]

200J13T70.4740.529(AC005169) putative ribosomal protein L28 [Arabidopsis thaliana]

200K24T70.6480490.54878(AC004482) unknown protein [Arabidopsis thaliana]

200L6T70.45060.552488UDP-glucose dehydrogenase [Glycine max]

201E11T70.4270.507(AC005169) 60S ribosomal protein L31 [Arabidopsis thaliana]

201E20T70.2770.283F22O13.34 [Arabidopsis thaliana]

201F18T70.5810.502

201F23T70.3260.313

201H11T70.5140.44glycine-rich protein (clone uA-3) - tomato

201L15T70.5221770.502857

201N20T70.4330.414Strong similarity to gb|D14550 extracellular dermal glycoprotein (EDGP) precursor from Daucus carota. ESTs gb|H37281, gb|T44167, gb|T21813, gb|N38437, gb|Z26470, gb|R65072, gb|N76373, gb|F15470, gb|Z35182, gb|H76373, gb|Z34678 an...

201N4T70.3890.387ribosomal protein S19 [Solanum tuberosum]

201O1T70.4280.393(AL078467) putative protein [Arabidopsis thaliana]

201P18T70.420.559(AJ010461) RNA helicase [Arabidopsis thaliana]

202B15T70.3930.414PYRROLINE-5-CARBOXYLATE REDUCTASE (P5CR) (P5C REDUCTASE)

202H18T70.330.489ribosomal protein S11 (probable start codon at bp 67) [Arabidopsis thaliana]

202I14T70.4740.613(AC004521) unknown protein [Arabidopsis thaliana]

202J7T70.5660.625(AC002535) putative protein disulfide-isomerase [Arabidopsis thaliana]

202K14T70.5970.6490.6447520.553133DAD-1 homolog - Arabidopsis thaliana

202K20T70.2230.252(AL049607) putative protein [Arabidopsis thaliana]

202K22T70.5190.585(AB007790) DREB2A [Arabidopsis thaliana]

202K24T70.5590.36160S RIBOSOMAL PROTEIN L6 (YL16-LIKE)

202L16T70.3664120.577956(X92976) ZAP1 [Arabidopsis thaliana]

202P14T70.3180.410.611170.27053ribosomal protein L23a [Arabidopsis thaliana]

202P6T70.5410.418No definition line found [Arabidopsis thaliana]

202P9T70.2780.318MS5-like protein [Arabidopsis thaliana]

203C1T70.6470.635

203E16T70.5080.52660S RIBOSOMAL PROTEIN L6 (YL16-LIKE)

203L14T70.5630.565GLYCINE-RICH RNA-BINDING PROTEIN 7

203M12T70.1180.227(AC006577) Belongs to the PF|00657 Lipase/Acylhydrolase with GDSL-motif family. ESTs gb|T44453, gb|T04815, gb|T45993, gb|R30138, gb|AI099570 and gb|T22281 come from this gene. [Arabidopsis thaliana]

203O8T70.5510.601

204A13T70.1230.193

204A20T70.6127430.598618(AC007591) EST gb|H77143 comes from this gene. [Arabidopsis thaliana]

204B15XP0.6619710.627906(AL035602) putative protein (fragment) [Arabidopsis thaliana]

204F15XP0.5020.573Unknown protein [Arabidopsis thaliana]

204H9T70.4670.608

204J18T70.3580.3170.2307950.561944(AB027458) ACE [Arabidopsis thaliana]

204M18XP0.5840.543WD-40 REPEAT PROTEIN MSI2

204M4XP0.5969690.627753

204M4XP0.3940.506

204N10T70.6400580.626856

204N6T70.2170.2250.5366830.287808

205A3XP0.5556960.650646

205F18T70.5220.644

205L11XP0.5580.574(AL021635) HSP associated protein like [Arabidopsis thaliana]

205L22T70.6481480.444444

205N2T70.2410.307(AL035601) putative protein [Arabidopsis thaliana]

206D3T70.3650.299(X98190) peroxidase ATP2a [Arabidopsis thaliana]

206E11T70.4060.406(AC006919) unknown protein [Arabidopsis thaliana]

206F17T70.2840.302(AC006438) unknown protein [Arabidopsis thaliana]

206L10T70.6190.627EST gb|N37577 comes from this gene. [Arabidopsis thaliana]

206L22T70.2150.363jasmonate inducible protein isolog [Arabidopsis thaliana]

206O16T70.6580.623(Z97336) hypothetical protein [Arabidopsis thaliana]

206O5T70.2045640.388595histone H3 [Triticum aestivum]

206P22T70.5910.426(AC007060) Contains the PF|00650 CRAL/TRIO phosphatidyl-inositol-transfer protein domain. ESTs gb|T76582, gb|N06574 and gb|Z25700 come from this gene. [Arabidopsis thaliana]

207C4T70.6493160.346038HEAT SHOCK PROTEIN 81-2 (HSP81-2)

209A11T70.2060.27209A11T7

209A20T70.395010.520682(AC005489) F14N23.8 [Arabidopsis thaliana]

209F12T70.3850.438(AL021637) DAG-like protein [Arabidopsis thaliana]

209I17T70.5650.66

209O17T70.4660.518(AB013886) RAV1 [Arabidopsis thaliana]

209P16T70.4110.3650.5716350.442028

20D6T70.6445620.523364THIAZOLE BIOSYNTHETIC ENZYME PRECURSOR (ARA6)

210A12T70.590.556(X97829) product similar to ccr protein, Citrus paradisi; PIR: S52663 [Arabidopsis thaliana]

210A22T70.38970.526162(AC006954) putative glucosyltransferase [Arabidopsis thaliana]

210E13T70.4030.4560S RIBOSOMAL PROTEIN L13 (BBC1 PROTEIN HOMOLOG)

210J14T7A0.650.638Similar to pyrophosphate-dependent phosphofuctokinase beta subunit gb|Z32850 from Ricinus communis. ESTs gb|N65773, gb|N64925 and gb|F15232 come from this gene. [Arabidopsis thaliana]

210O7T70.5270.575

211H2T70.510.516CATALASE 3

211L23T70.3420.438GLUTATHIONE S-TRANSFERASE ERD11 (GST CLASS PHI)

211N1T70.3340.365T7N9.12 [Arabidopsis thaliana]

212C21T70.5340.5090.4032610.651111(AL022023) plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana]

212F12T70.450.502

212H5T70.5030.476(AC007519) Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424 comes from this gene. [Arabidopsis thaliana]

212L20T70.2190.168trypsin inhibitor propeptide [Brassica oleracea]

212M10T70.1210.213(U78721) putative auxin-regulated protein [Arabidopsis thaliana]

212O21T70.340.323(AJ012215) GAL83 protein [Solanum tuberosum]

212P9T70.6633660.624444

213B15T70.6505690.540811(AB007801) cytochrome b5 [Arabidopsis thaliana]

213M9T70.60.62037phosphatidylinositol-4-phosphate 5-kinase isolog [Arabidopsis thaliana]

214A8T70.4280.487senescence-associated protein sen1 - Arabidopsis thaliana

214A9T70.3440.499(AL096860) 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana]

214B2T70.540.275(AC007113) putative villin [Arabidopsis thaliana]

214C14T70.2474710.3448680.5079050.3916660.5312040.544554TUBULIN ALPHA-1 CHAIN

214D4T70.4324810.625(AL034567) putative protein [Arabidopsis thaliana]

214I10T70.3480.432(AL049730) putative pollen-specific protein [Arabidopsis thaliana]

214I21T70.3630.423Similar to acyl carrier protein, mitochondrial precursor (ACP) NADH-ubiquinone oxidoreductase 9.6 KD subunit (MYACP-1), gb|L23574 from A. thaliana. ESTs gb|Z30712, gb|Z30713, gb|Z26204, gb|N37975 and gb|N96330 come from this gene...

215C17T70.1850.172(AB008107) ethylene responsive element binding factor 5 [Arabidopsis thaliana]

215G7T70.5370.617

215J12T70.6378290.522844

215J18T70.2050.271jasmonate inducible protein isolog [Arabidopsis thaliana]

216P21T70.5748210.652173actin depolymerizing factor 1 [Arabidopsis thaliana]

218M21T70.4070.387similar to the peptidase family S16 [Arabidopsis thaliana]

219B5T70.4762450.2964630.4726820.635185(AC007119) unknown protein [Arabidopsis thaliana]

219D6T70.274770.166071

219G6T70.4798560.297894

219J16T70.3540.3930.5560570.39287840S RIBOSOMAL PROTEIN S18

220B14T70.60.201

220F6T70.5190.56(AL035528) glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]

220G13T70.6560.594(AL031326) putative protein [Arabidopsis thaliana]

220H4T70.3950.425(AL035709) phosphoenolpyruvate carboxykinase (ATP)-like protein [Arabidopsis thaliana]

220H9T70.6290.604

220I16T70.3130.42GLYCINE-RICH RNA-BINDING PROTEIN 7

220O22T70.2480.3480.6094550.542328(AC005169) unknown protein [Arabidopsis thaliana]

220O23T70.5320.594similar to ripening-induced protein, gp|AJ001449|2465015 and major#latex protein, gp|X91961|1107495 [Arabidopsis thaliana]

220P21T70.5630.5260.3762770.4650820.5371280.492053Tubulin beta-2 chain - soybean

221D18T70.2940.323(D45848) calmodulin-related protein [Arabidopsis thaliana]

221D3T70.6230.58

221H9T70.4180.44460S RIBOSOMAL PROTEIN L34

221J11T70.2480.3490.2190850.176043histone H3 (H3-1.1) [Medicago sativa]

221J9T70.3590.324unknown [Arabidopsis thaliana]

222A14T70.5270.601probable imbibition protein - wild cabbage

222A6T70.5020.576

222C9T70.5620.464(AC006223) putative CCR4-associated factor [Arabidopsis thaliana]

222E12T70.6540.645

222F13T70.6498260.631709(AC005309) unknown protein [Arabidopsis thaliana]

222H10T70.574740.333911(X98315) peroxidase [Arabidopsis thaliana]

222H15T70.5230.477SET PROTEIN

222I8T70.6450.656POLYADENYLATE-BINDING PROTEIN 2 (POLY(A) BINDING PROTEIN 2) (PABP 2)

222J11T70.3810.475

223C2T70.4726610.346632(AB012044) plasma membrane aquaporin (PAQ1) [Raphanus sativus]

223D2T70.290.445

223L16T70.343740.3652L-ascorbate peroxidase (EC 1.11.1.11) precursor - Arabidopsis thaliana (fragment)

223L4T70.4750.472(AC003674) unknown protein [Arabidopsis thaliana]

223M24T70.3290.407(AC005698) T3P18.4 [Arabidopsis thaliana]

223O2T70.6460.414(AC007202) Is a member of the PF|00044 glyceraldehyde 3-phosphate dehydrogenase family. ESTs gb|T43985, gb|N38667, gb|N65037, gb|AA713069 and gb|AI099548 come from this gene. [Arabidopsis thaliana]

224E21T70.350.5230.2097270.302823HISTONE H3

224F20T70.6521730.637724T-COMPLEX PROTEIN 1, ZETA SUBUNIT (TCP-1-ZETA) (CCT-ZETA)

224M20T70.4080.496ubiquitin / ribosomal protein CEP52 - Arabidopsis thaliana

225I21T70.1574290.0292020.3451320.5982140.114620.525014

226H4T70.6120.654(AC002332) putative PRP19-like spliceosomal protein [Arabidopsis thaliana]

226J3T70.2980.592ubiquitin-conjugating enzyme [Arabidopsis thaliana]

227D7T70.6170.659(AC007659) putative VAMP-associated protein [Arabidopsis thaliana]

227H10T70.5670.625(AC004238) putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana]

227H23T70.5820.544

227I13T70.3510.4990.4563610.55521340S RIBOSOMAL PROTEIN S15

228C3T70.4340.517ribosomal protein L23a [Arabidopsis thaliana]

228E9T70.470.4810.5488490.509967T-COMPLEX PROTEIN 1, ALPHA SUBUNIT (TCP-1-ALPHA) (CCT-ALPHA)

229B13T70.4050.374(AJ001342) Putative S-phase-specific ribosomal protein [Arabidopsis thaliana]

230I1T70.5250.597Contains similarity to thyroidal receptor for N-acetylglucosamine gb|A27284 from Homo sapiens. EST gb|N65493 comes from this gene. [Arabidopsis thaliana]

231D7T70.5870.649polypyrimidine tract binding protein (heterogeneous nuclear ribonucleoprotein I)

231E7T70.6080.572polypyrimidine tract-binding protein PTB-2 - human

231F14T70.4790.5650.5498190.659751ribosomal protein S27 [Arabidopsis thaliana]

231K1T70.6210.655(AC002505) putative disease resistance protein [Arabidopsis thaliana]

232H5T70.490.4880.3474670.311393(AL022023) plasma membrane intrinsic protein (SIMIP) [Arabidopsis thaliana]

232I4T70.570.464(AC006954) unknown protein [Arabidopsis thaliana]

233A8T70.5280.649(D85381) cytochrome c oxidase subunit Vb precursor [Oryza sativa]

23C11XP0.520.513

23D11T70.2160.175(U78721) putative auxin-regulated protein [Arabidopsis thaliana]

23F2T70.6122440.625AtJ1 protein - Arabidopsis thaliana

23F9T70.5604910.485473(AJ243307) putative plasma membrane intrinsic protein [Pisum sativum]

240E22T70.3360.3570.4043950.655405laminin receptor-like protein [Brassica napus]

240F11T70.3710.396(AL030978) GH3 like protein [Arabidopsis thaliana]

240M22T70.5436240.587188(AL021635) cytochrome P450 like protein [Arabidopsis thaliana]

240N22T70.3090.225homeotic protein ATK1 - Arabidopsis thaliana

240N4T70.2660.2880.4522960.5984

240P12T70.6111460.650572(AC007357) Strong similarity to gb|X97864 cytochrome P450 from Arabidopsis thaliana and is a member of the PF|00067 Cytochrome P450 family. ESTs gb|N65665, gb|T14112, gb|T76255, gb|T20906 and gb|AI100027 come from ...

241A21T70.613780.656028(AC004561) putative C-4 sterol methyl oxidase [Arabidopsis thaliana]

241C15T70.4470.43

241J19T70.5360.563

241P4T70.6118840.622957(Z99759) putative poly(a) binding protein [Schizosaccharomyces pombe]

241P6T70.5710.57anthranilate synthase (EC 4.1.3.27) beta chain - Arabidopsis thaliana

242E22T70.1080.134

242G20T70.6310.633(X99348) pectinacetylesterase precursor [Vigna radiata]

244B18T70.5590.54

245D4T70.6080.589(AC003674) putative beta-1,3-glucanase [Arabidopsis thaliana]

245H16T70.4080.551(X97829) product similar to ccr protein, Citrus paradisi; PIR: S52663 [Arabidopsis thaliana]

245K3T70.2120.567(AC005106) T25N20.9 [Arabidopsis thaliana]

245O1T70.2930.3640.6623710.59732560S RIBOSOMAL PROTEIN L18

246C7T70.5516210.562478

246E16T70.3280.3850.5965990.516778(AJ012684) 40S ribosomal protein S19 [Cicer arietinum]

246F1T70.4850430.292074(X98189) peroxidase ATP1a [Arabidopsis thaliana]

246G16T70.2810.129NONSPECIFIC LIPID-TRANSFER PROTEIN 3 PRECURSOR (LTP 3)

246H17T70.4840.551(AL035440) putative protein [Arabidopsis thaliana]

246J12T70.3480.4030.4050970.325743ribosomal protein S11 (probable start codon at bp 67) [Arabidopsis thaliana]

246N21T70.3490.314thioglucosidase (EC 3.2.3.1) 3D precursor - Arabidopsis thaliana

247A5T70.1740.324

247D9T70.5541380.266491(AF091621) ubiquitin-conjugating enzyme E2 [Catharanthus roseus]

247E8T70.3470.53760S RIBOSOMAL PROTEIN L37

247H12T70.6520.655

247H14T70.6280.541247H14T7

248G21T70.4952620.557893

248I14T70.2760.535

248O19T70.5540.501(AF022464) CYP77A3p [Glycine max]

248O2T70.5460.553drought-induced protein Dr4 - Arabidopsis thaliana

249A3T70.6470.587

249B15T70.5890.643monosaccharid transport protein STP4 - Arabidopsis thaliana

249D20T70.6020.5430.566360.596572(AC007576) Similar to DNA-binding proteins [Arabidopsis thaliana]

249E21T70.4890.518(AC005936) protease inhibitor II [Arabidopsis thaliana]

250C22T70.6575940.582453glutathione peroxidase [Zantedeschia aethiopica]

250E1T70.1350.625RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 3B PRECURSOR (RUBISCO SMALL SUBUNIT 3B)

251E19T70.6340.556(AF125574) lysyl-tRNA synthetase; LysRS [Arabidopsis thaliana]

270B3T70.0670.099thioglucosidase (EC 3.2.3.1) 3D precursor - Arabidopsis thaliana

271C9T70.4830.602

271G6T70.4820.457(Z81042) similar to Yeast hypothetical protein YEY6 like; cDNA EST yk206h5.3 comes from this gene; cDNA EST yk206h5.5 comes from this gene; cDNA EST yk303h1.3 comes from this gene; cDNA EST yk303h1.5 comes from this gene; cDN...

272B6T70.4390.454(AC006954) unknown protein [Arabidopsis thaliana]

272C9T70.5655970.510638

275D8T70.6536960.62555

276A12T70.3760.3750.442630.2338910.541920.65641ribosomal protein S19 [Solanum tuberosum]

276F3T70.4010.403Similar to 60S ribosome protein L19; coded for by A. thaliana cDNA T04719; coded for by A. thaliana cDNA H36046; coded for by A. thaliana cDNA T44067; coded for by A. thaliana cDNA T14056; coded for by A. thaliana cDNA R90691 [Ara...

276H4T70.1310.149

277F12T70.4621580.427124

279B7T70.5230.644(Z97343) hypothetical protein [Arabidopsis thaliana]

280C6T70.3953480.6putative aminotransferase [Capsicum chinense]

280E7T70.2760.378

281B6T70.4080.441ribosomal protein S19 [Solanum tuberosum]

283C11T70.6150.625

284G7T70.5640.58Identical to 1-aminocyclopropane-1-carboxylate oxidase (ACC oxidase) gb|X66719 (EAT1). ESTs gb|T43073, gb|T5714, gb|R90435, gb|R44023, gb|AA597926, gb|AI099676, gb|AA650810 and gb|29725 come from this gene. [Arabidopsis thaliana]

288A3T70.4840.508

288B8T70.2620.255(AL049862) putative mitochondrial protein [Arabidopsis thaliana]

289C12T70.3120.383

289D6T70.652690.630365

290A12T70.3930.561

290B6T70.3320.4380.3359690.2943740.5844050.66295460S RIBOSOMAL PROTEIN L27A

290H3T70.2892880.568988(D64052) cytochrome P450 like_TBP [Nicotiana tabacum]

291A8T70.4565210.628083(AC006577) Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from Mus musculus and contains several PF|00076 RNA recognition motif domains. ESTs gb|T21032 and gb|T44127 come from this gene. [Arabidopsis t...

291D12T70.3850.5390.4766140.643512(Y17053) At-hsc70-3 [Arabidopsis thaliana]

292B11T70.510.579(AC007576) initiation factor 5A-4 [Arabidopsis thaliana]

294B7T70.4590.436(AB013886) RAV1 [Arabidopsis thaliana]

294B8T70.3670.4180.5563180.62032biotin carboxyl carrier protein (clone BP6) - rape

294C11T70.5910.614

296C7T70.5750.5

2A9T7P0.2340.308(AJ010473) RNA helicase [Arabidopsis thaliana]

301C12T70.5290.449

302C4T70.420.471(AC006223) 40S ribosomal protein S12 [Arabidopsis thaliana]

302G4T70.5060.4480.5615480.640228

303B5T70.50.639639

303C8T70.4880.461

303E10T70.6520.585aminolevulinate dehydratase [Lycopersicon esculentum]

304F4T70.5590.55

305A4T70.6260.61

305F7T70.5610.449Unknown protein [Arabidopsis thaliana]

306C8T70.0470.122(AL078467) putative protein [Arabidopsis thaliana]

306D10T70.4660.482histone H2A (clone CH-IV) - Chlamydomonas reinhardtii

309D6T70.5370.392(AF104328) cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]

309E11T70.4610.417

309H12T70.5550.585Serine carboxypeptidase isolog [Arabidopsis thaliana]

310E11T70.3030.335(AC005824) 60S acidic ribosomal protein P2 [Arabidopsis thaliana]

310H8T70.2780.37260S RIBOSOMAL PROTEIN L44

314D1T70.340.646

315E4T70.3870.625

315H2T70.4720.522

316B12T70.2270.451

32A11XP0.3440.399(AC007070) unknown protein [Arabidopsis thaliana]

32F9T70.5390.517(Y10216) hypothetical 3-isopropylmalate dehydrogenase [Arabidopsis thaliana]

34B5T70.320.309PGP237-11 [Petunia x hybrida]

34E12T70.3023250.388971(AL049751) pectate lyase like protein [Arabidopsis thaliana]

34H8T70.6360.52(AL049711) putative protein [Arabidopsis thaliana]

35D10T70.5230.646protein from Oryza sativa and contains a PF|01566 Nramp domain. [Arabidopsis thaliana]

36A9T70.4550.575

36B2T70.1650.209

36B4XP0.6295730.492156

36D7T70.4140.497(AL035356) putative protein [Arabidopsis thaliana]

36E3T70.5010.599

36G7T70.6442460.524187senescence-associated protein sen1 - Arabidopsis thaliana

37A6TT0.6260.647EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2-BETA)

37D12XP0.6092430.583333

37G8T70.6370.638EUKARYOTIC INITIATION FACTOR 4A-1 (EIF-4A-1)

37H2TT0.6050.611

39E2T70.5672930.507692

39F1T70.6280.549

3A4T7P0.4510.421HEAT SHOCK 70-RELATED PROTEIN 1, MITOCHONDRIAL PRECURSOR

40B7T70.170.163

40C3T70.593750.452658Unknown protein [Arabidopsis thaliana]

40D11T70.340.38

40E11T70.6456350.662772(Z97338) cytochrome P450 like protein [Arabidopsis thaliana]

40E2T70.0840.153

41A10T70.6364390.320088

41C7XP0.1752260.045454

41D5T70.4910.571

41D8T70.2930.331

41E8T70.5510.541Serine carboxypeptidase isolog [Arabidopsis thaliana]

41F10T70.4910.4990.2340940.114049Tubulin beta-2 chain - soybean

41F3T70.3174130.1206860.2733970.389375

41G10T70.5510.506(AC007087) unknown protein [Arabidopsis thaliana]

41G8T70.4850.45

41H3T70.0540.038unknown [Arabidopsis thaliana]

42A7XP0.593820.648083

42B7XP0.510.481

42D5T70.3560.446

42E8T70.5580.555

42F4T70.6430.649(AL035528) glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]

42G2XP0.5080.611(AC005917) putative WD-40 repeat protein [Arabidopsis thaliana]

42H8T70.2890.3620.595530.25634460S RIBOSOMAL PROTEIN L18

43B9T70.3820.471ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA)

43C6T70.4010.624lamin - Arabidopsis thaliana

43E1T70.3710.361(Y14851) DAL1 protein [Arabidopsis thaliana]

44B9T70.4250.306

44E1T70.5890380.589371

44G12T70.60.548

45A4T70.493490.243231

45B4T70.5660.363GLUTATHIONE S-TRANSFERASE PM24 (24 KD AUXIN-BINDING PROTEIN) (GST CLASS PHI)

45D4T70.6490.6110.6006990.655142Similar to elongation factor 1-gamma (gb|EF1G_XENLA). ESTs gb|T20564,gb|T45940,gb|T04527 come from this gene. [Arabidopsis thaliana]

46D9T70.5837160.56769NADPH-specific isocitrate dehydrogenase [Glycine max]

46E12T70.3370.406(AL031004) ribosomal protein S6 - like [Arabidopsis thaliana]

48A2T70.3247420.431372

48C3XP0.5425530.605866

48C8T70.2870.3620.5954230.326126(AC004077) 60S ribosomal protein L18A [Arabidopsis thaliana]

48H1T70.5990.217MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 5 (MAP KINASE 5) (ATMPK5)

49B1T70.5646550.600877

49F11T70.520.453NHP2/RS6 FAMILY PROTEIN YEL026W HOMOLOG

50A9BT70.4790.576

51E5T70.4770.545(AL049655) kinesin-like protein [Arabidopsis thaliana]

52B12BT70.4080.516jasmonate inducible protein isolog [Arabidopsis thaliana]

60E3T70.3460.46nodulin [Glycine max]

61A12T70.2830.277(X98190) peroxidase ATP2a [Arabidopsis thaliana]

61D1T70.6510.44

62A1XP0.3880.562(AF083914) annexin [Arabidopsis thaliana]

62F1TM10.6430.441

63A1XP0.4180.484

63B9T70.4430.62

64H11T70.3660.383(AC006438) unknown protein [Arabidopsis thaliana]

65F10T70.4670.331(X98674) zinc finger protein [Arabidopsis thaliana]

66D5T70.6380.6540.5273140.40531(Y12576) histone H2B [Arabidopsis thaliana]

66H5T70.610.595similar to several proteins containing a tandem repeat region such as Plasmodium falciparum GGM tandem repeat protein (GB:U27807); partial CDS [Arabidopsis thaliana]

6E9T7P0.080.092

72D11T70.3290.253dormancy-associated protein [Arabidopsis thaliana]

73D2T70.4230.520.4357790.364420.5926080.64697440S RIBOSOMAL PROTEIN S13

76C10T70.5662610.579015GTP-BINDING NUCLEAR PROTEIN RAN-1

76E2XP0.4650.533ERECTA [Arabidopsis thaliana]

76H3T70.6169380.47533614-3-3-LIKE PROTEIN GF14 CHI

77B11T70.5580.621

78H6T70.488210.592592

79F3T70.6580.576

80F8T70.590.647hypothetical protein - rape

81A12T70.5514810.593806(AC006232) putative rac GTPase activating protein [Arabidopsis thaliana]

81B4T70.5980.562

81D11XP0.6140.605

81E1T70.430.478ferritin [Glycine max]

82B4T70.3470.5610.3965310.36236760S RIBOSOMAL PROTEIN L5

82H8T70.4290.396(AC005396) putative proline-rich protein [Arabidopsis thaliana]

83F6T70.5520.618(AJ004807) arcA 3 [Nicotiana tabacum]

85D1XP0.5730.51

85F3T70.6351610.633547

85H10XP0.580.61

86C3T70.5260.42240S RIBOSOMAL PROTEIN S8

86F11XP0.4740.429

86G11T70.1340.211(AB018441) phi-1 [Nicotiana tabacum]

88A13XP0.4840.49

88E14XP0.3380.283

88I13T70.320.404PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA)

88I17T70.5430.649lcl|prt_seq No definition line found [Arabidopsis thaliana]

88K11T70.5430.554(AL049657) putative protein [Arabidopsis thaliana]

88N1XP0.50.532608(AL049480) putative pathogenesis-related protein [Arabidopsis thaliana]

88O12T70.6070.604(AL035678) putative protein [Arabidopsis thaliana]

89I19XP0.4433960.548571

89M18T70.5020.555(AC007727) Similar to gb|Z11499 protein disulfide isomerase from Medicago sativa. ESTs gb|AI099693, gb|R65226, gb|AA657311, gb|T43068, gb|T42754, gb|T14005, gb|T76445, gb|H36733, gb|T43168 and gb|T20649 come from t...

90F16T70.6450.487

90I11XP0.5840.66

90J14T70.340.404(AC005698) T3P18.4 [Arabidopsis thaliana]

90J2T70.3430.447(AC005395) putative CCCH-type zinc finger protein [Arabidopsis thaliana]

90M3XP0.410.315(AC005724) putative trehalose-6-phosphate synthase [Arabidopsis thaliana]

90O10T70.5140.61(AC005936) protease inhibitor II [Arabidopsis thaliana]

91A13T70.3440.4(AL021687) putative protein [Arabidopsis thaliana]

91A22T70.4460.598

91B20T70.4930.647

91C2T70.5020.547T7N9.20 [Arabidopsis thaliana]

91E24XP0.4940.488(D88537) delta 9 desaturase [Arabidopsis thaliana]

91F18XP0.2850.297

91F3T70.2320.234

91H8T70.5914890.631311(AC007661) unknown protein [Arabidopsis thaliana]

91J3T70.6350.493(AL035538) putative protein [Arabidopsis thaliana]

91L18T70.3340.384RNA-binding protein cp29 precursor - Arabidopsis thaliana

91L1XP0.6364750.64796COPROPORPHYRINOGEN III OXIDASE PRECURSOR (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)

91N20T70.4830.375laminin receptor-like protein [Brassica napus]

91P15T70.3150.386GAR1 PROTEIN

92A18XP0.510.606Strong similarity to glycoprotein EP1 gb|L16983 Daucus carota and a member of S locus glycoprotein family PF|00954. ESTs gb|AA067487, gb|Z35737, gb|Z30815, gb|Z35350, gb|AA713171, gb|AI100553, gb|Z34248, gb|AA728536, gb|Z30816 an...

92A6XP0.4750.576CHAPERONIN CPN60, MITOCHONDRIAL PRECURSOR (HSP60)

92B13T70.6140.543GLUTATHIONE S-TRANSFERASE PM24 (24 KD AUXIN-BINDING PROTEIN) (GST CLASS PHI)

92B6T70.3250.364replication protein A1 [Oryza sativa]

92D17XP0.3480.064

92D4XP0.4260.47760S RIBOSOMAL PROTEIN L15

92G6T70.3780.498putative auxin-repressed protein [Prunus armeniaca]

92H23XP0.6322410.636363

92L11XP0.5870.598

92M17T70.3040.405(AC004450) putative protein kinase [Arabidopsis thaliana]

93J5T70.4030.425prohibitin [Arabidopsis thaliana]

93K21T70.5090.557ADENINE PHOSPHORIBOSYLTRANSFERASE 1 (APRT)

93M23T70.0530.16(AL035353) Proline-rich APG-like protein [Arabidopsis thaliana]

93M24T70.350.453GLYCINE-RICH RNA-BINDING PROTEIN 7

94B5T70.5780.635

94G7T70.0350.079

94G8XP0.2980.439

94H18T70.4970.543(D89342) luminal binding protein [Arabidopsis thaliana]

94J5T70.5649660.385826(AB012044) plasma membrane aquaporin (PAQ1) [Raphanus sativus]

94L12T70.3450.283

94L5T70.3820.495nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 [Arabidopsis thaliana]

94N15T70.3576640.572722

94O7T70.4280.53Dwarf1 protein - Arabidopsis thaliana

94P4T70.360.351protein from Arabidopsis thaliana BAC gb|AC005311. [Arabidopsis thaliana]

95J23XP0.6090.374

95L21XP0.6612310.579166

95O1XP0.4450.5750.4396550.557445

96D6T70.3720.389(AC004669) unknown protein [Arabidopsis thaliana]

96K15T70.0820.297dormancy-associated protein [Arabidopsis thaliana]

96O21T70.4780.476(AC005309) putative Tub family protein [Arabidopsis thaliana]

96P20T70.4267780.391304(AF091621) ubiquitin-conjugating enzyme E2 [Catharanthus roseus]

97A15T70.6450.6560.3670880.203125(AL049655) protein disulfide-isomerase-like protein [Arabidopsis thaliana]

97B4T70.6074770.370075

97C5T70.6490.606lcl|prt_seq No definition line found [Arabidopsis thaliana]

97D3T70.6220.607

97F17XP0.5492950.459119

97N7T70.3340.439(AL035528) glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]

97N7XP0.4320.401

98A20XP0.6170.630.6394420.224457

98C13T70.6040.612

98C2T70.3820.3790.3821580.533333(AL050400) fibrillarin-like protein [Arabidopsis thaliana]

98K18T70.470.534

99B9XP0.5340.561

99D19T70.6520.541

99F3T70.2790.2870.2388340.0653190.3342870.569049HISTONE H3

99I10T70.2310.321CYSTEINE PROTEINASE RD21A PRECURSOR

99I23T70.5350.61360S RIBOSOMAL PROTEIN L35A

99M18T70.5431350.412645(AC007354) ESTs gb|AA395702, gb|AA395400, gb|T22596 and gb|T43781 come from this gene. [Arabidopsis thaliana]

99O7T70.3460.233

99P15T70.5260.612

ATHATL2A0.4240.358

B64TP0.5980.473

C40.3050.553

CI00070.6290.6280.563630.488721

CI00140.440.483

E10A3T70.4920.457(AC003672) unknown protein [Arabidopsis thaliana]

E10B11T70.6020.437

E10B6T70.4330.503(AC007018) 40S ribosomal protein S17 [Arabidopsis thaliana]

E10B7T70.5240.554belongs to the L5P family of ribosomal proteins [Arabidopsis thaliana]

E10D6T70.1472860.327956(AC005966) Strong similarity to gb|X82030 chloroplast RNA binding protein (RNP1) from Phaseolus vulgaris. [Arabidopsis thaliana]

E10E5T70.3310.3920.6554450.274285(AJ012684) 40S ribosomal protein S19 [Cicer arietinum]

E10E8T70.4490.553(AC003672) unknown protein [Arabidopsis thaliana]

E10F3T70.4730.645

E10G8T70.2250.248(AF126374) At14a protein [Arabidopsis thaliana]

E11B2T70.3020.365(D88536) delta 9 desaturase [Arabidopsis thaliana]

E11B3T70.3460.401ccr2

E11B5T70.3320.493

E11E8T70.6346510.134453

E11G8T70.5880.648

E12D8T70.2820.544ANTER-SPECIFIC PROLINE-RICH PROTEIN APG (PROTEIN CEX)

E12F5T70.1710.216(AF104328) cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]

E12G7T70.4770.393(AC005396) putative proline-rich protein [Arabidopsis thaliana]

E1A5T70.4710.53540S RIBOSOMAL PROTEIN S6

E1B7T70.4550.603686

E1C7T70.4890.420.3386580.530973hexokinase 2 [Arabidopsis thaliana]

E1D7T70.4620.5730.520730.405339

E1G12T70.580.484(AC007119) unknown protein [Arabidopsis thaliana]

E1H1T70.3430.181(Y12641) superoxide dismutase [Arabidopsis thaliana]

E2A12T70.4697980.637931(AL080237) putative protein [Arabidopsis thaliana]

E2A4T70.3570.4610.4455710.528455(AC005896) 40S ribosomal protein S5 [Arabidopsis thaliana]

E2B1T70.5870.555(AC005170) putative chloroplast initiation factor 3 [Arabidopsis thaliana]

E2B5T70.3720.509(AC005169) copia-like retroelement pol polyprotein [Arabidopsis thaliana]

E2C4T70.3380.352(AC005698) T3P18.4 [Arabidopsis thaliana]

E2D3T70.5840.593(Z97178) elongation factor 2 [Beta vulgaris]

E2D4T70.4320.489(AL049480) putative ribosomal protein S10 [Arabidopsis thaliana]

E2E10T70.5490.539

E2E7T70.3780.428(AC002535) 60S ribosomal protein L7A [Arabidopsis thaliana]

E2F11T70.3860.406(AC004077) 60S ribosomal protein L18A [Arabidopsis thaliana]

E2F12T70.1490.219(U75193) germin-like protein [Arabidopsis thaliana]

E2G6T70.5040.6050.5211640.20769760S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)

E2H3T70.5220.465

E2H7T70.2470.3640.6550250.568888(AC005169) putative ribosomal protein L28 [Arabidopsis thaliana]

E3F10T70.6180.572(AJ235272) 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii]

E3G2T70.4260140.127017

E4A10T70.4820.5620.3138880.6548290.5299560.65915ORF 1244 [Nicotiana tabacum]

E4D12T70.2770.404(AC004005) 60S ribosomal protein L7 [Arabidopsis thaliana]

E4D2T70.5950.606lysophospholipase isolog [Arabidopsis thaliana]

E4E10T70.1750.187

E4E5T70.3680.227

E4E7T70.5770.5190.5860110.50609760S RIBOSOMAL PROTEIN L6 (YL16-LIKE)

E4H12T70.5902430.366666unknown [Arabidopsis thaliana]

E4H6T70.4670.425(AC003674) unknown protein [Arabidopsis thaliana]

E5D9T70.3170.374(AC006223) 40S ribosomal protein S12 [Arabidopsis thaliana]

E5E10T70.2820.367similar to several small proteins (~100 aa) that are induced by heat, auxin, ethylene and wounding such as Phaseolus aureus indole-3-acetic acid induced protein ARG (SW:32292) [Arabidopsis thaliana]

E5E12T70.3090.462

E5E5T70.4830.462(AJ010458) RNA helicase [Arabidopsis thaliana]

E5F3T70.620.524(AC005396) similar to gibberellin-regulated proteins [Arabidopsis thaliana]

E5G4T70.3890.533

E5H10T70.3461950.248080.2145970.277846TUBULIN BETA-6 CHAIN

E6A3T70.4180.366

E6A5T70.5274940.650909

E6A6T70.3612070.0921790.5216470.427685

E6A8T70.390.428(AF144752) 40S ribosomal protein S7 homolog [Brassica oleracea]

E6B1T70.2940.44940S RIBOSOMAL PROTEIN S9 (S7)

E6B2T70.3680.3930.5442170.497041(AJ131831) diacylglycerol O-acyltransferase [Arabidopsis thaliana]

E6B4T70.6010.613

E6E1T70.4410.510.648780.59292

E6F6T70.5082870.50495(AL022373) putative protein [Arabidopsis thaliana]

E7B11T70.2640.251(Z84377) xylosidase [Aspergillus niger]

E7B2T70.3950.386No definition line found [Arabidopsis thaliana]

E7B8T70.1410.195(AF144389) thioredoxin-like 3 [Arabidopsis thaliana]

E7D9T70.4770.272(AC007138) predicted protein of unknown function [Arabidopsis thaliana]

E7G5T70.3910.439

E7H10T70.4710.593

E7H11T70.3140.325(AC004450) putative extensin [Arabidopsis thaliana]

E7H6T70.3450.460.5636260.4021660.3102850.45747540S RIBOSOMAL PROTEIN S23 (S12)

E8A5T70.380.367(AC005956) unknown protein [Arabidopsis thaliana]

E8A9T70.3180.517

E8B4T70.634730.580645

E8B6T70.6180.6070.5632470.582417

E8C6T70.3329160.523178

E8C6T70.2990.343

E8D12T70.5048150.224938endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana]

E8D5T70.4580.574

E8D9T70.4030.216

E8E4T70.3590.464

E8E6T70.1380.532(U75193) germin-like protein [Arabidopsis thaliana]

E8G4T70.3390.40960S RIBOSOMAL PROTEIN L27

F10C11T70.6297780.325301

F10C9T70.440.603(AL022580) putative pectinacetylesterase protein [Arabidopsis thaliana]

F10E6T70.5690.652(AC002535) unknown protein [Arabidopsis thaliana]

F10E8T70.6308980.35545

F10G8T70.5177650.43233(AL049640) putative protein [Arabidopsis thaliana]

F10G9T70.6186440.580952

F1A1T70.5890.651farnesyl diphosphate synthase precursor [Arabidopsis thaliana]

F1A9T70.3040.463

F1G3T70.3990.4140S RIBOSOMAL PROTEIN S2

F2B5T70.5087710.460937

F2B5T70.4930.64

F2B9T70.1510.1770.5097080.470588

F2C2T70.3770.325Similar to

F2C4T70.5090.4920.3996370.1309140.578260.241895

F2C8T70.5437270.224561(AL021961) bZIP transcription factor - like protein (fragment) [Arabidopsis thaliana]

F2D3T70.5660.537

F2E10T70.3870.512(AL022141) putative disease resistance protein [Arabidopsis thaliana]

F2E5T70.6490.491(AC007017) unknown protein [Arabidopsis thaliana]

F2F2T70.3190.574(AF149053) phytochrome kinase substrate 1 [Arabidopsis thaliana]

F2F5T70.6280.647

F2F8T70.4590160.357142

F3B4T70.6338020.375

F3C5T70.5663260.511904Similar to

F3C6T7A0.6140.581

F4A10T70.3230.296inositol 1,3,4-trisphosphate 5/6-kinase [Arabidopsis thaliana]

F4A9T70.2130.3(AC004684) putative phosphoribosylaminoimidazole carboxylase [Arabidopsis thaliana]

F4B8T70.2728310.570519(AL021749) heat-shock protein [Arabidopsis thaliana]

F4C11T7A0.5640.411(AJ006404) late elongated hypocotyl [Arabidopsis thaliana]

F4E2T70.430.399(AL035602) carbohydrate kinase-like protein [Arabidopsis thaliana]

F4E7T70.2204520.395857cellulose synthase catalytic subunit [Arabidopsis thaliana]

F4F2T70.1950.26

F4H11T70.2740.363

F4H3T70.4980.564

F4H7T70.5250.628

F6F6T70.5870.589

F6F9T70.4768220.286992INDOLEACETAMIDE HYDROLASE (IAH) (