new science – new regulations bruce herbold (epa) iep and pod management teams

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New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

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Page 1: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

New Science – New Regulations

Bruce Herbold (EPA)IEP and POD Management Teams

Page 2: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Fall abundance in 2008 continued low for all POD fishes. Source DFG 2008 Fall MW Trawl

No sampling 1974 and 1979

Delta Smelt

0.0

0.3

0.6

0.9

1.2

1.5

1.8

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Longfin Smelt

0

2

4

6

8

10

12

14

16

18

20

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Striped Bass

0

5

10

15

20

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Threadfin Shad

0

2

4

6

8

10

12

14

16

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Page 3: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

FISH ABUNDANCE

PHYSICAL

& CHEMICAL

FISH HABITAT

Prior Fish Abundance

TOP-DOWN

BOTTOM-UP

Water

Diversions

Predation

Food availability

Food quality

Temperature Turbidity Salinity

Contaminants

Disease

Toxic algae

SAV

Page 4: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Fish Facilities Provide Data on Numbers Salvaged

Up to 35-65 Percent of Delta

Inflow

Water Project Losses

Page 5: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0500

1,0001,500

0

10,000

20,000

0

5,000,0000

500,000Striped Bass

Delta smelt

Longfin smelt

Winter Salvage (Nov-Mar)

94 96 98 00 02 04

Threadfin Shad

250,000

2,500,000

Page 6: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Fall abundance in 2008 continued low for all POD fishes. Source DFG 2008 Fall MW Trawl

No sampling 1974 and 1979

Delta Smelt

0.0

0.3

0.6

0.9

1.2

1.5

1.8

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Longfin Smelt

0

2

4

6

8

10

12

14

16

18

20

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Striped Bass

0

5

10

15

20

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Threadfin Shad

0

2

4

6

8

10

12

14

16

66 68 70 72 74 76 78 80 82 84 86 88 90 92 94 96 98 00 02 04 06 08

(Th

ou

sa

nd

s)

Ab

un

da

nc

e In

de

x

Page 7: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Old and Middle Rivers as an Integrator of Hydrodynamic Effects

Old River

Middle

River

Page 8: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

y = -4E-05x + 0.7265

R2 = 0.309

0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

-10000 -5000 0 5000 10000 15000

1993-2005

Mean Values for December-March

Negative Old & Middle River Flows Apparently Increase Adult Delta Smelt Entrainment

Source: Source Lenny Grimaldo (In Review)

r2 = 0.31, p<0.05

Del

ta S

mel

tS

WP

& C

VP

Sa

lva

ge

(lo

g c

ou

nt)

Combined Old & Middle River Flow (cfs)

1993-1999

2000-2005

Page 9: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

“First Flush/turbidity spike”W

inte

r

14 days of OMR

-2000 cfs

Page 10: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Spawning (temp<12 C)La

te W

inte

r-Sp

ring

OMR -3500 to -5000 cfs

Page 11: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Downstream Movement (temp 12-25 C)

Sp

ring

OMR -1250 to -5000 cfs

Page 12: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Typical Distribution

Source: Sommer et al. In review

Fall

Wet year outflow

7000-11,000 cfs

Rearing ( about 1 ppt salinity)

Page 13: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

FISH ABUNDANCE

PHYSICAL

& CHEMICAL

FISH HABITAT

Prior Fish Abundance

TOP-DOWN

BOTTOM-UP

Water

Diversions

Predation

Food availability

Food quality

Temperature Turbidity Salinity

Contaminants

Disease

Toxic algae

SAV

Page 14: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

1965 1975 1985 1995 2005

Year

Fal

l E

Q i

nd

exFall “habitat quality” deteriorated

Striped bass

Delta smelt

Source: Feyrer et al. (CJFAS 2007)

Page 15: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

September-November Outflow

0

20000

40000

60000

80000

100000

120000

140000

Page 16: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Fall EQ + Fall Abundance predicts juvenile production

Fall “habitat quality” matters to the delta smelt population

Page 17: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0.0

2.0

4.0

6.0

3.5 4.5 5.5Log Dec-May Outflow

Lo

g A

bu

nd

an

ce

2007

20062003

20042005

20022001

2008

Increased outflow = more longfin smelt.

Fall Midwater Trawl

Upper Estuary –relation changed

Lower Estuary – relation unchanged

0.0

2.0

4.0

6.0

3.5 4.5 5.5Log Dec-May Outflow

Lo

g A

bu

nd

an

ce

2006

200520042003

2002

2007

2001

2008

Bay Study Otter Trawl

Pre-clam

Post-clam

POD years

Source:

Randy Baxter, DFG

Page 18: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0

4000

8000

12000

16000

20000

South SF Central SF San Pablo Suisun West Delta

Region

To

tal

Catch MWT

OT

0

200

400

600

800

South SF Central SF San Pablo Suisun West Delta

Region

To

tal

Catch MWT

OTb

a

Where the smelt are in the bay

Page 19: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Other habitat stressors

• Bioassays showed little effect (<5 %) in 2005 or 2006.

• <15% adult delta smelt impaired• 100 % of young striped bass show

multiple infections• Little evidence of toxicity

Source: Inge Werner, Swee Teh, and Dave Ostrach (UCD)

Page 20: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams
Page 21: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Sewage Treatment Plants

POD & Nutrients

Example: Ammonia pollution

Increasing Ammonia levels

in Delta and Suisun Bay

Potential Ecosystem

Effects

Page 22: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Monthly Ammonia Loads in the Sacramento River at Hood and in Effluent from the Sacramento Regional WWTP

0

200

400

600

800

1000

1200

1975 1980 1985 1990 1995 2000 2005Date

To

tal M

on

thly

Am

mo

nia

-N L

oa

d(m

etr

ic t

on

s/m

on

th)

Sacramento River atHood/Greenes LandingSRWTP Effluent

~ 90% of the Ammonia Load at Hood comes from the Sacramento Regional

Wastewater Treatment Plant

Sources: A. Mueller-Solger, DWR; A. Jassby, in press SFEWS

Page 23: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Widespread blooms of the toxic alga Microcystis in

2007

Core Habitat of Delta Smelt

August Levels: 1.3 million cells/mL

Source: Peggy Lehman (DWR)

MicrocystisMicrocystis grows grows well on ammonia! well on ammonia! (Diatoms don’t)(Diatoms don’t)

MicrocystisMicrocystis grows grows well on ammonia! well on ammonia! (Diatoms don’t)(Diatoms don’t)

Page 24: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

July August 2007 Microcystis bloom and smelt effects

L55

Fish & zooplankton collection

August Microcystis bloom

Sept delta smelt distribution

Page 25: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Alternative Life Histories

0

10

20

30

40

Fall Winter Spring SummerFall Winter Spring Summer

Liberty Island

% c

atc

h

40

0

Page 26: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

FISH ABUNDANCE

BOTTOM-UP

Food availability

Food quality

A Major Emphasis on Habitat Restoration

to Boost the Delta Food Web

BUT… only local effect likely

Page 27: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

FISH ABUNDANCE

PHYSICAL

& CHEMICAL

FISH HABITAT

Prior Fish Abundance

TOP-DOWN

BOTTOM-UP

Water

Diversions

Predation

Food availability

Food quality

Temperature Turbidity Salinity

Contaminants

Disease

Toxic algae

SAV

Page 28: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

2 5 10 15 205

10

50

100

500

72

7375

76

77

78

80

81

82

83

8485

86

8788 8990

91

92

93

94

95

96

97

98

9900

01

02

03

04

Sur

viva

l Ind

ex

Biomass, mgC m-3

Del

ta S

mel

t

Zooplankton (Jul-Oct)

Source: Wim Kimmerer (In review)

Food Affects Summer Smelt Survival But Recent Levels Were Not Remarkable

Page 29: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Stock - Recruitment Effects

0

20

40

60

80

0 5 10 15 20 25 30

0

4

8

12

16

0 200 400 600 800 1000 1200

Fall Midwater Trawl (Adults)

Delta smelt

Threadfin shad

Juvenile

Pro

du

ctio

nPOD Years

Page 30: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

20002001

2002

2003

2004

2005

2006 2007

R2 = 0.88

-1.5

-1

-0.5

0

0.5

1

1.5

2

2.5

3 4 5 6 7

ln FMWT (previous year)

ln T

NS

Have Delta Smelt Dropped Below Critical Population Levels?

Adults (FMWT)

Juvenile

(TN

S)

Source: Anke Mueller-Solger (DWR)

Recent T

rend

Page 31: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Striped Bass Revisited

Page 32: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

What’s Wrong With This Picture?

Age-O

Adults

0

20

40

60

80

100

0

1000

2000

3000

19

69

19

74

19

79

19

84

19

89

19

94

19

99

20

04

Tow

net

index

Adult

abu

ndance

(1

000)

Juveniles

Adults

Page 33: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

1960 1970 1980 1990 2000 2010

What Happened To All Of The Mamas?

Perc

en

t Fem

ale

s

Gill Net Sampling

40

30

10

20

Page 34: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0

500,000

1,000,000

1,500,000

2,000,000

2,500,000

3,000,000

19

69

19

71

19

73

19

75

19

77

19

79

19

81

19

83

19

85

19

87

19

89

19

91

19

93

19

96

20

00

20

03

20

05

Effect of Sex Shift on Population?Petersen Estimates

Adult

s

Page 35: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

0

500,000

1,000,000

1,500,000

2,000,000

2,500,000

3,000,000

19

69

19

71

19

73

19

75

19

77

19

79

19

81

19

83

19

85

19

87

19

89

19

91

19

93

19

96

20

00

20

03

20

05

0

500,000

1,000,000

1,500,000

2,000,000

2,500,000

3,000,000

19

69

19

71

19

73

19

75

19

77

19

79

19

81

19

83

19

85

19

87

19

89

19

91

19

93

19

96

20

00

20

03

20

05

Gill Net Sex Ratio Applied to Petersen Estimates

Effect of Sex Shift on Population?Petersen Estimates

Adult

sA

dult

s

Page 36: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams

Flow

Phosphorus

Ammonia

Temperature

Contaminants

“Harvest”

turbidity

Clams

Jellyfish

Edge and benthic fish

Microcystis

Aquatic Weeds

Low and Constant

Limited

Lots

Warm

High

High

Low

Highly variable

Lots

Little

Cool

Low

Low

High

Diatoms

Pelagic fish

Natives thrive

Resists invasions

Page 37: New Science – New Regulations Bruce Herbold (EPA) IEP and POD Management Teams