natural selection in a model ocean mick follows, scott grant, stephanie dutkiewicz, penny chisholm

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Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm MIT

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Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm MIT. Ocean productivity regulates distribution and storage of nutrients and carbon: biological pumps. Composition and functional characteristics of pelagic ecosystem vary in space and time. - PowerPoint PPT Presentation

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Page 1: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Natural Selection in a Model Ocean

Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

MIT

Page 2: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Ocean productivity regulates distribution and storage of nutrients and carbon: biological pumps

Page 3: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Composition and functional characteristics of pelagic ecosystem vary in space and time...

coccolithophores – CaCO3 structural material

diazotrophs – fix nitrogen picoplankton

diatoms – Si structural material

Page 4: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

...affecting efficiency/quality of export:e.g. recycling “microbial loop” vs. exporting diatom blooms

Page 5: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Biogeography:

What are the dynamics underlying provinces?

(Longhurst)

Page 6: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Johnson et al., (2006)

Prochlorococcus ecotypes along AMT section

Page 7: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Models of the Marine Ecosystem

Volterra (1928), Cushing (1935)

Riley (1946)

Page 8: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Nutrient conservation

NPZ models... e.g. Fasham et al. (1990)

Page 9: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

recent biogeochemical models begin to represent functional diversity in the ecosystem

(e.g. Moore et al., 2002; Gregg et al., 2002; Chai et al.; 2002; Dutkiewicz et al., 2005)

Page 10: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Functional group characteristics imposed by parameter values

Multiple functional groups of phytoplankton

simplified example...

Page 11: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Prochlorococcus ecotypes (Johnson et al., 2006)

Page 12: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

AMT observations

Johnson et al. (2006)

From modeling point of view, reveals...

More complexity: functional diversity within species

More simplicity: well defined functional differences between otherwise very closely related organisms

Page 13: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Simplify modeling approach by introducing explicit natural selection:

● Many possible functional groups (10's – 100's)● Nutrient conservation (physical principle)● Natural selection (ecological principle)

● Generic phytoplankton● assign “functions” randomly● choose sensitivities randomly within prescribed ranges

Page 14: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Multiple functional groups:

generalized system...

Parameter values assigned with some randomnessSuccessful functional groups determined by competition

Page 15: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

“Random” assignment of functional properties (trade-offs?)

Page 16: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

phyto (log scale) temp & PAR nutrients

sub-tropical1-dimensionalmodel

seasonal cycle

initially100 functionalgroups

Page 17: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

phyto nutrients

Ensembleaverages

Page 18: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

max growth rate Kpo4 Kno3 Kpar

Kinhib Npref Topt

Page 19: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm
Page 20: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm
Page 21: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm
Page 22: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Why do only a handful of functional groups persist in each case?

● Reflects number of potentially limiting resources (Tilman, 1977)

● Also sensitive to physical environment, e.g. scales of turbulent variation (Tozzi et al., 2004)

Tilman (1977)

Page 23: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

● Applying principle of competition simplifies model construction

● Level of diversity emerges, not imposed

● Self-selects “functional groups” according to physical conditions and nutrient availability

Do plausible biological regimes and “ecotypes” emerge?

Page 24: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Johnson et al., (2006)

Prochlorococcus ecotypes along AMT section

Page 25: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

● global circulation model

● 30 functional groups of phytoplankton

● 2 grazers

● nutrients NO3, NH4, NO2, PO4, Si, Fe

● phytoplankton functions and parameter values set by random process

● ensemble approach

Page 26: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Single ensemble member (Iseed 5007)

annual mean surface phyto (uM P) after 5 yrs

Page 27: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

annual mean phyto (P), 0-120m (Iseed 5007)

Page 28: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

annual mean nutrients, 0-120m (Iseed 5007)

Page 29: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Prochlorococcus Synechococcus

obs(log)

model(log)

model(linear)

Page 30: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Observed Modeled

NO3

NH4

NO2

Page 31: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Johnson et al., (2006)

observed modeled

Page 32: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Outlook

Natural selection approach appropriate for modeling ocean ecosystems and biogeochemical cycles

Enables focus on underlying dynamics of model, not tuning of parameter values

Dynamic ecosystem approach can adapt to different climate/nutrient environments

Ensemble approach provides statistical viewpoint(c.f. adaptive approach?)

Prochlorococcus ecotype observations provide well defined system – can model help interpret the observed structures?

Page 33: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm
Page 34: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Single ensemble member (Iseed 17656)

annual mean surface phyto (uM P) after 5 yrs

Page 35: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

annual mean phyto(P), 0-120m (Iseed 17656)

Page 36: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

annual mean nutrients, 0-120m (Iseed 17656)

Page 37: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Prochlorococcus

Diversity within species...

Page 38: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

Productivity of the oceans controlled by

● Availability of nutrients (light, phosphorus, nitrogen iron...)● Significant role for wind-driven, upper ocean circulation

Page 39: Natural Selection in a Model Ocean Mick Follows, Scott Grant, Stephanie Dutkiewicz, Penny Chisholm

... and quality of sinking particulate material

association of organic carbon with CaCO3 and opal, >2000mKlaas and Archer (2002)