molecular cell biology fifth edition chapter 5: biomembranes and cell architecture copyright © 2004...

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Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish • Arnold Berk • Paul Matsudaira • Chris A. Kaiser • Monty Krieger • Matthew P. Scott • Lawrence Zipursky • James Darnell

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Page 1: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Molecular Cell BiologyFifth Edition

Chapter 5:Biomembranes and Cell Architecture

Copyright © 2004 by W. H. Freeman & Company

Harvey Lodish • Arnold Berk • Paul Matsudaira • Chris A. Kaiser • Monty Krieger • Matthew P. Scott •

Lawrence Zipursky • James Darnell

Page 2: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Plasma membrane

1. Affect shape and function

2. Anchor protein to the membrane

3. Modify membrane protein activities

4. Transducing signals to the cytoplasm

Page 3: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 4: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 5: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Lipid Bilayer

1. Impermeable barrier prevent diffusion of water soluble solute

2. Membrane protein mediate transport of specific molecule

3. Maintained by hydrophobic interaction

Page 6: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 7: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Van der waal interaction between membranes

Page 8: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

RBC

Smooth and flexible

Page 9: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Long , slender extension

Page 10: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Multiple layers of modified plasma membrane: formed by adjacent glial cells

Page 11: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

The faces of cellular membrane

1. Internal faces

surface orient toward the interior of the compartment

2. External faces

the surface presented to the environment

Page 12: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Chloroplast in plants

Page 13: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

磷酸甘油酯

Acyl group:

c16 or c18,

0, 1 or 2 double bond

i.e.plasminogen

Page 14: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

鞘酯 sphingomyelin

glucosylcerobroside

choline head膽鹼

Page 15: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Four ring hydrocarbon

amphipathic

Hydrocarbon chain

Page 16: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

FRAP:

Fluorescent Recovery After Photobleaching

Page 17: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Most lipids and proteins are laterally mobile in biomembrane

Page 18: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 19: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 20: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 21: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 22: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Lipid composition influence physical properties

of membrane:

1. Different composition of organs

2. Specialized membrane function

i.e. apical surface if intestinal lumen sphingolipids: phosphoglycerides: cholesterol

basolateral 0.5 1 1

apical 1 1 1

Page 23: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Long saturated fatty acyl chain

heat

3. Affects membrane fluity

a. short C-H chain are more fluid

b. kinks in C-H: less stable

Decreased thickness

Page 24: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

4. Influence thickness of membrane

Page 25: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

5. Local curvature

Larger head

Smaller head

Page 26: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

bilayer enriched with PC in the exoplasmic leaflet and with PE in the cytoplasmic face would cause the natural curvature

Page 27: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Membrane asymmetry Affects:

1. Enzyme cleavage

phospholipase cleaves phospholipids at

exoplasmic sides

cytosolic sides are resist to phospholipase

cleavage

Page 28: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Cleave phospholipid at cytosolic side

Page 29: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

2. Membrane based functions

i.e. signal transduction pathway of

Cleavage by phospholipase C

phosphotidyl inositol

PI + Diacylglycerol( DAG)

Activation of signal transduction pathway

Page 30: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

i.e. phosphotidyl serine

stimulation of platelate by serum

translocate to exoplasmic face

activate enzyme for blood clotting

Page 31: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Lipid Raft

micro domain of cholesterol, sphingolipids and certain membrane protein

Page 32: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

GM1: glycosphingolipids

PLAP: placental alkaline phosphatase

Page 33: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

TfR: transferrin receptor

Page 34: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Three categories of membrane protein

1. Integral membrane protein( transmembrane

protein)

a. exoplasmic domain

cytosolic domainhydrophilic

b. Membrane spanning domain: hydrophobic

c. glycosylated

Page 35: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

2. Lipid anchored membrane protein

covalently bound to lipid

3. Peripheral membrane protein

bound to membrane by interaction with

integral membrane protein

Page 36: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 37: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Glycophorin A: a typical single pass transmembrane protein

-helices

Binding of Arg or Lys to negatively charged head of phospholipid

Page 38: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

-helices:

20-25 hydrophobic amino acids

Interact with fattyacyl of lipid by van- der-waals

Page 39: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

G protein:

7-multipass bacteriorhodopsin

retinal

Page 40: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Porin

Trimric tramsmembrane

protein

Barrel shape subunit with ß-

sheet wall and hydrophilic

center

aliphatic and aromatic side

chain position the protein on

the membrane

Page 41: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Anchoring of plasma membrane proteins to the

bilayer by covalently linked hydrocarbon group

1. anchor by fatty acyl group

2. Anchor by unsaturated fatty acid to cyctein at or near C terminal

3. GPI anchoring

lipid anchor on membrane is glycosyl phosphotidyl inositol( GPI)

Page 42: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Gly Cys

C14 or C16 C15 or C20

Glycosylphosphosphatidylinositolsugar

Page 43: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

All transmembrane proteins and glycolipids are asymetrically oriented in the bilayer

Page 44: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 45: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 46: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Motility of membrane protein

1. Float freely

2. Immobile

3. Anchored by cytoskeletal protein

Page 47: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

PH ( pleckstrin homology domain)

Page 48: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Interfacial binding surface and mechanism of action of phospholipase A2

Page 49: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk

Effects of external ion concentration on water flowacross the plasma membrane of an animal cells

Page 50: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 51: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk
Page 52: Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk