micro respi skin infect 1 and 2 revised1

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  • 8/4/2019 Micro Respi Skin Infect 1 and 2 Revised1

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    ***Note: Mukha lng pong mahaba kasi table form at saka ung pictures hahaha. Pero maiksi lng yan, promise! Hahaha =] pls take note yung mga

    nakabold at underlined kasi un ang usually inemphasized ni Dra. Padla :3

    Systemic Mycosis

    Are inherently virulent Orginate primarily in the lungs; can spread to different body organs Caused by dimorphic fungi Broad distribution, however, is confined in the body and the absence of animal-to human horizontal transmission typifies this.

    A. Endemic Respiratory Mycoses Have restricted geographical locations Exhibit thermal dimorphism (2 forms: mold and yeast; depends on temperature) Acquired through inhalation ofconidia (asexual spores) from the soil Portal of entry: Respiratory tract Lungs are the main focus of infection Usually asymptomatic or of very short duration Accompanied by a high degree of specific resistance to reinfection Affect otherwise healthy individuals At rm temp, molds persist, but at 37OC, molds transforms into yeast.

    Disease Characteristics Geographical

    Distribution/Transmision

    Clinical Disease Laboratory Diagnosis Identification/Lab

    Test

    Treatment

    and

    prevention

    Histoplasmosis Aka darlings dse;cavers dse,

    spelunkers dse, N.

    American

    histoplasmosis;

    Caused by

    Endemic to North

    America, Locally

    distributed

    Habitat: Grow in soil

    contaminated with bat

    Asymptomaticinfection (90-95%)

    [self limiting flu-like

    illness;

    Pulmonary infection-inhaled

    microconidia taken

    GMS/Giemsa/PAS show small

    round to oval

    intracellular and

    extracellular

    yeast cell

    KOH not

    Exoantigen test;

    nucleic acid probe

    Skin test

    Serology (cf test);

    Antigen (Ag)

    detection

    Usually not

    required,

    Lungs:

    Itraconazole,

    ketoconazole,

    fluconazole

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    histoplasma

    capsulatum

    An ascomycte withtelemorphic(ajellomyces

    capsulatus = sexual

    state)

    Thermallydimorphic;

    facultative

    intracellular

    Infectious particle:

    Microconidia

    Tissue form:

    intracellular yeast cell

    and bird excreta

    Transmission: soil

    infections, bat, avian

    habitat; can be controlled

    by occupational exposure

    Not transmissible from

    human to human or

    animal to human.

    up by alveolar

    macrophage;

    mimics PTB

    (acute/chronic);

    Disseminatedinfection (includes

    RES and

    mucocutaneous;

    skin lesions);

    primary sign is

    splenomegaly

    (assoc w.

    immunosuppressio)

    Primary cutaneousis rare

    Mimics PulmonaryTuberculosis (PTB)

    because

    homogenous

    appearance at the

    hilar

    H. capsulate varduboisii is large,

    thick walled yeast

    causing a variant

    form ofhistoplasmosis

    prevalent in Africans

    that preferentially

    involves the skin,

    subcutaneous

    tissues, lymphatics

    and bones

    applicable

    Rm TempCulture: fine

    septate hyphae,

    large tuberculatemacroconidia

    and small

    microcondia

    (therefore highly

    infectious)

    Tuberculatemacroconidia dx of the

    organism

    Invitro/Cuture atBHIA: 37

    OC:

    appear single

    budding yeast

    cell

    Systemic:

    Amphotherici

    n B

    Others:

    Surgical

    debridement

    Prevention:

    Wearing

    protecting

    clothing,

    mask, soil

    decontaminati

    on with 3-5%formalin

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    Blastomycosis

    B for Broad

    Based Bud!

    Aka N. Americanblastomycosis;

    Chicago dse,

    gilchrist;s dse;

    suppurative

    granulomatous

    mycosis of the lungs,

    skin and

    subcutaneous tissue

    caused byblastomyces

    dermatitidis

    ascomycyte, thermally dimorphic

    inhabits decayingwood, soil

    saprophyte

    Infectious particle:

    conidia

    Tissue form:broad

    based yeast cells

    found in N. America,

    Africa, Asia

    outbreaks associated

    with activities with moist

    soil enriched with organic

    debris and rotting wood

    Natural disease that is

    common in cats and dogs

    and therefore not

    transmissible from these

    animals.

    Asymptomatic (50%) Pulmonary infection

    (50%) TB like

    Disseminatedinfection

    Chronic cutaneousinfection

    (verrucous/ulcerative

    crusty, elevated

    lesions with

    microabscesses that

    weeps)

    Primary cutaneous(rare)

    KOH shows thick

    walled yeast cells

    with single broad

    based bud

    At Rm temperature:

    White, cottony

    Mycelia form,

    Pyriform conidia

    borne singly on

    septate hyphae

    Culture at 37C:

    Double walled yeast

    cells with single

    broad based budattached to a parent

    by a wide base

    which are

    pathognomic of

    blastomycosis

    Exoantigen test;

    nucleic acid probe

    Others:

    Skin test

    Serology

    Immunofluorescence

    (IF)

    Ag detection

    Ketoconazole,

    itraconazole,

    fluconaole

    Disseminated:

    Ampho b

    Exicision for

    skin lesion

    Coccidiomycosis Aka Posadas dse,San Joaquin Valley

    Fever, Desert

    Rheumatism

    Caused by

    Endemic in western

    hemisphere; desert; Dust

    storm; Soil tillage;

    California; Sonoran

    desert

    Highly infectious, acute,

    self limited nd usually

    benign respiratory

    disease

    KOH shows thick

    walled spherules

    filled with non-

    budding small

    endospores

    Exoantigen; nucleic

    acid probe,

    demonstration of

    spherule production

    in animals

    Acute Respi

    Disease not

    necessary to

    treat

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    Paracoccidiomyc

    osis

    P for Pulmonary

    dse!!!

    Aka pulmonary dse;

    South American

    Blastomycosis; Lutz-

    Splendore-Almeidas

    Dse

    Caused byParacoccidiooides

    braziliensis

    Deuteromycete Thermally

    dimorphic

    Infectious particle:

    Conidia

    Habitat: unknown but

    found to reside in humid

    soil rich in proteins;

    cultivated in fruit bats

    and armadillos

    Higher incidence ratio in

    Males because estrogen

    inhibits conversion of

    mycelium to yeast.

    Asymptomaticinfection

    Pulmonary infection Dissemination infect

    (oral/nasal mucosa)

    - ChronicGranulomatous

    lesions formed by

    stimulation of alpha-

    glucan [cell wall

    polysaccharide]

    - Mulberry Lesions @GIT mucosa

    - Facial skin mostcommon site of

    infection

    - Triad of sxs inendemic areas:

    Pulmonary lesions,

    edentulous mouth,

    cervicallymphadenopathy

    Clinical specimens:

    sputum, pus, crusts

    from lesions

    KOH shows yeast

    cells with multiple

    narrow based buds

    (blasto kasi is broad

    based)

    KOH shows mariners

    wheel appearance

    Culture rm temp:

    septate hyphae with

    no typical patternofsporulation

    Cutlture at 37OC

    - Thick Yeast cellswith ships or

    mariners

    steering wheel

    appearance

    - Cells are large,spherical topyriform and

    with thick walls

    Exoantigen

    Dna proble

    ID:

    Skin test

    Serology

    Itraconazole,

    ketoconazole,

    ampothericin

    B, sulfa drugs

    Others:

    surgical

    excision of

    localized

    lesion

    Penicilosis caused byPenicilloisis

    marneffei

    Only Penicillumspecies that is

    Bamboo rat (reservoir);

    endemic in SEA;

    Portal of entry: lungs

    Affects both healthy and

    immunosuppressed

    individuals who have

    traveled or lived in

    endemic areas

    KOH shows small

    yeast cells with

    transverse septum

    Culture at RT:

    Exoantigen test

    Conversion to yeast

    forms

    Itraconazole

    and

    ketoconazole

    For serious

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    thermally dimorphic

    Produces redpigments around

    the colony (kasi

    other penicillium

    produces yellow)

    Reproduce:transverse

    fission/schizogony

    Infectious particle:

    Conidia

    Indicator of HIV infection

    in endemic areas

    Pulmonary infection Disseminated

    infection

    -similar to histoplasmosis;

    affects many internal

    organs; exhibits as skin

    lesion such as those seen

    in AIDS patients

    Conidiophore branch

    into metullae which

    support the phialides

    that bear chains of

    conidia (brush like or

    finger like)

    Colonies produce

    diffusible red

    pigment around the

    colony (very

    characteristics)

    Culture @ 37OC:

    Round to oval yeast

    cell with cross walls

    infection:

    Ampho B

    B. Opportunistic Mycoses Portal of entry: respiratory, mucocutaneous (for Candidiasis) Infectious particle: conidia, mycelia Widely distributed as saprophytes or as members of normal flora (in comparison with endemic na restricted and distribution) Invade only in the presence of underlying predisposition Invade mainly those who are immunosuppressed

    Disease Characteristics Geographical

    Distribution/

    Transmission

    Clinical Disease Laboratory

    Diagnosis

    Identification/Lab

    Test

    Treatment and

    Prevention

    Candidiasis Caused byCandida spp

    Mostly C.albicans

    Normal flora

    Endogenously

    acquired

    Normally found

    in Normal flora

    of skin, mouth,

    Most common

    systemic/opportunistic

    fungal infection

    worldwide; clinical

    spectrum: extremely

    diverse

    Gramstain/KOH

    shows small

    budding yeast

    cell and

    pseudohyphae

    (meaning no true

    Germ Tube Test

    (GTT) (+) for C.

    albicans

    Other test:

    Assimilation

    Cutaneous:

    Topical

    Nystatin,

    ketoconazole,

    fluconazole

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    of GIT

    Ascomycete Dimorphic

    [lang! not

    thermally]

    Exist aspseudohypha

    e or hyphjae

    Reproduce bybudding

    Infectious/tissue

    form: yeast cell

    and

    pseudohyphae

    vagina, mucous

    membranes,

    stool

    Major

    colonizing

    habitat: GIT

    Leading fungal infection

    patients with HIV-AIDS

    Cutaneous andSubcutaneous

    Systemic/disseminated/invasive

    - Candidemia(catheter related)

    - Acute chronicdisseminated

    - Deep organcandidiasis (pulmo

    candidiasis)

    Predisposing factors: Physiological

    (pregnancy and age)

    Trauma (burn,infection)

    Hematological(neutropenia, cellular

    immunodeficiency)

    Endocrinological (DM,Hypothyroidism,

    Addisons dse) Iatrogenic

    (chemotherapeutics,

    corticosteroids, oral

    contraceptives,

    catheters, etc)

    Others: IV drugaddiction,

    malnutrition

    septation)

    Culture at RT and

    37:

    -Pseudophyae

    with clusters of

    round

    blastoconida

    - Chlamydospore,

    yeast cells and

    pseudohyphae

    produced on

    chlamydospore

    on cornmeal agar

    test

    Biotyping IF Immunohisto-

    chemistry

    DNA probes,PCR

    Mannanantigen

    detection

    (RIA, ELISA,

    LAT)

    Systemic:

    Ketoconazole,

    fluconazole,

    itraconazole,

    flucytosine,

    ampho B

    Prevention:

    Avoid

    disturbing the

    normal balance

    of microbial

    flora and intact

    host defense

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    Aspergillosis

    A for ABPA!

    A for Acute

    Angle!

    Caused byAspergillus spp

    ( commonlyfumigates and

    flavus)

    Ascomycte; Ubiquitous; freq lab

    contaminants

    Infectious particle:

    Asexual spore:

    conidia

    Tissue form:

    hyphae

    Natural

    reservoir: soil

    and air

    frequent

    laboratory

    contaminants

    Transmission:

    inhalation of

    conidia

    Allergic form:Allergic

    Bronchopulmonary

    Aspergillosis (ABPA)

    may give rise toasthma or hay

    fever

    colonizingform/pulmonary

    aspergilloma orfungus ball

    Invasive ordisseminated (for

    immunocompromised)

    Mycotoxicosis(ingestion of food

    products with toxin)

    KOH show

    1. wide septatedichotomousl

    y branching

    hpyhae

    (45deg or

    acute angle);

    2. condialheads

    supports

    swollen

    vesicle with

    rows of

    phialides

    bering radial

    chains ofconidia.

    ***so take note

    niyo to ung diff

    kasi

    zygomycomycete

    kamuka nia***

    Serology

    Immunohisto-

    chemistry

    Galactomannan

    antigen detection

    in serum

    Allergic form:

    itraconazole;

    corticosterioid

    Aspergilloma:

    Surgery &

    ampho B

    Diseminated:

    Itraconazole,

    fluconazole,

    ampho B

    Prevention:

    Avoid or

    minimizeexposure to

    conidia;

    prophylactic

    low-dose

    ampho B or

    itraconazole

    Cryptococcosis

    [has 3 biotypes]

    [singit ko dito

    ang virulence

    factors ah?

    Wala ng box eh

    :P ]

    Aka busse-buschke dse;Torulosis

    Caused byFilobasidella

    neoformans

    Sexual phase:Basidiomycete

    (the spores are

    produced

    Widespread in

    nature; soilsaprophyte and

    abundanct in

    avian habitats

    Transmission:

    Inhalation of

    non-

    encapsulated

    Primary site of infection:

    Lungs

    One of the most life

    threatening infection with

    AIDS

    Pulmo (acute/chronic) usually

    asymptomatic; mx:

    KOH/India ink

    shows yeast cellswith wide

    capsule

    Culture 37OC:

    -Creamy, mucoid

    yeast colonies

    -Brown to blkack

    colonies on

    Biochemical test:

    (+) Urease Test:fuschia pink in

    color

    (+) caffeic acid

    test due to

    phenoloxidase

    production

    Others:

    Ampho B;

    ampho B 5 FCcombination;

    fluconazole

    prophylaxis ff

    primary

    treatment (for

    AIDS patients)

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    Virulence

    factors:

    1)Capusule:

    -wide

    -Antiphagocytic

    -Serotype

    A,B,C,D and AD

    2.Production of

    phenoloxidase

    convert

    phenoilic

    compounds to

    melanin;

    survival

    mechanismwithin

    phagocytes

    externally, on

    the end of

    specialized

    cells called

    basidia.)

    SpecificallyCryptococcus

    neoformans

    and C. gattii

    Encapsulatedyeast

    Replicate bybudding

    0nly fungalspecies with

    well-defined

    virulence

    factor

    Infectious

    particle: non-

    encapsulated

    yeast (at 27 and

    37 C);

    basidiospore

    Or minimally

    encapsulated

    yeast cells

    soilatary pulmo

    nodulein the

    mediastinum

    mimicking a carcinoma

    Disseminated Predilection for

    the CNS

    Meningitis: mostfrequent

    diagnosed form

    [difference ke

    cocciodiomycosis

    naman cause of

    death]

    Neutropismrelated tophenoloxidase

    activity

    Cutaneous (rare) mx:

    nodule in the lungs

    niger/bird seed

    agar due to

    phenoloxidase

    Direct IF Ag detection

    test

    DifferentialGrowth on L-

    canavarine

    glycine

    bromtymol

    blue

    - appear in cobalt

    blue for C. Gatti

    (blue)

    - Yellow on C.

    neofromans

    C Neoformans

    var neoformans

    [1st

    biotype]

    Serotype D

    Virulence factor:

    Capsule + 37 +

    phenoloxidase

    production

    Found in soil

    contaminated

    with pigeon

    droppings (rich

    nitrogen and

    alkaline pH of

    the droppings

    favors survival

    Affects

    immunocompromised

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    of the yeast)

    Globally

    distributed

    (predominantly

    in N. Europe

    and N. America

    C neoformans

    var gattii

    [2nd

    biotype]

    Serotype Band C

    Telemorphicname of

    filbasidiella

    bacillispora

    Infectiousparticle:

    basidiospores

    ***B = more

    prevalent and

    pathogenic

    Found ineucalyptus

    tree

    specifically:

    caladunensis

    (river red

    gum tree,

    and

    teretucornics (forest red

    gum tree),

    decaying

    wood

    forming

    hollows in

    living trees;

    Worldwidedistribution;Common on

    tropical/sub

    trop

    climates;

    (predomi-

    nantly in

    SEA, S.

    California,

    Affects

    immunocompetent

    Clinica Mx: Pneumonia

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    Australia,

    Africa

    C neoformans

    var grubii

    [3rd biotype]

    Serotype A Biological,

    ecological and

    epidemiological

    characteristics

    not yet clearly

    defined;

    Zygomycosis Akamucormycosis

    /phycomycosis

    Caused byfilamentous

    fungi namely:

    rhizopus,

    mucor, absidia

    Order:mucorales,

    Class:

    zygomycetes

    Non-septate Asexual form:

    sporangispore

    Sexual form:zygospore

    Acquired by

    exposure to

    sporangiospores

    Natural

    reservoir: soil

    air and water

    Ubiquitous;

    frequently

    encountered as

    contaminants

    (e.g bread

    mold)

    Primary Site of Infection:

    Lungs

    Rhinocerebral Most common;

    cotton like fungus

    Pulmonary Cutaneous GIT Disseminated

    -aggresive angio-

    invaised and

    predominantly

    infarctive.

    Risk factors:

    Diabetic acidosis

    Immunosuppression

    KOH shows wide

    ribbon like

    aseptate hyphae

    branching of

    right angle (ung

    narrow or acute

    angle is

    aspergillus)

    Culture @ RT:

    Cotton candy

    appearance of

    colonies

    Morphologic

    features identify

    species

    Caution in

    interpreting

    results because

    they are common

    contaminants

    Rhizopus:

    sporangia round;

    sporangiospore

    unbranched and

    at nodal;

    Mucor: sporangiaround; branch

    and at

    intermodal;

    columellae

    round to oval;

    rhizoid absent

    Absidia:

    Rudimentary,

    collumellaeconical;branch; in

    between nodes

    Ampho B

    Surgical

    debridement

    Control of

    predisposing

    factors

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    Characteristics of Species Causing Zygomycosis

    Characteristics Rhizopus Mucor Absidia

    Sporangia Round Round Pyriform

    Sporangiospores Unbranched, nodal Branched, intermodal Branched, intermodal

    Collumellae Hemi-spherical Round to oval Conical

    Rhizoids Well developed Absent Rudimentary

    Collarettes None remains when sporangial

    wall is dissolved

    Present when sporangial wall is

    dissolved

    ===

    Endemic Respiratory Mycosis

    1. Histoplasmosis H. Capsulatum

    GMS/giems/PAS show small round to oval intra and extracell yeast cell Culture at rm tem: fine septate hyphae, large tuberculate macroconidia and small microcondia (therefore highly infectious) Invitro/Cuture at 37: ppear single budding yeast cell

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    2. Blastomycosis B. dermatitidis

    KOH shows thick walled yeast cells with single broad based bud (3rd pic) At Rm temperature: White, cottony Mycelia form, Pyriform conidia borne singly on septate hyphae (1st pic) Culture at 37C: Double walled yeast cells with single broad based bud attached to a parent by a wide base which are pathognomic of

    blastomycosis (2nd

    pic)

    3. Coccidiomycosis C. immitis

    Koh shows thich walled endospore spherules Culture at RT: Hyphae bearing barrel shaped atroconindia separated by dysjunctor cells (2nd pic) Culture at 37: not routinely done4. Paracoccidiomycosis P. braziliensis

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    KOH shows yeast cells with multiple narrow based buds (blasto kasi is broad based) [2nd pic] KOH shows mariners wheel appearance [1st pic] Culture rm temp: septate hyphae with no typical patternof sporulation Cutlture at 37

    O

    C: Thick Yeast cells with ships or mariners steering wheel appearance [or sometimes mickey mouse]; Cells are large,spherical to pyriform and with thick walls

    5. Pencillosis P. marneffei

    KOH shows small yeast cells with transverse septum (2nd pic) Culture at RT: Conidiophore branch into metullae which support the phialides that bear chains of conidia (brush like or finger like) [1st

    and 3rd

    pic]

    Culture: Colonies produce diffusible red pigment around the colony (very characteristic ) [3rd pic] Culture at 37OC temp : Round to oval yeast cell with cross walls

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    Opportunistic Mycoses

    1. Candidiasis C. albicans Gramstain/KOH shows small budding yeast cell and pseudohyphae (meaning no true septation) Culture at RT and 37: Pseudophyae with clusters of round blastoconida; Chlamydospore, yeast cells and pseudohyphae produced on

    chlamydospore on cornmeal agar

    2. Aspergillosis Aspergillus spp.

    KOH show a) wide septate dichotomously branchinghpyhae (45deg or acute angle); (3rd

    pic) b) condial heads supports swollen vesicle with

    rows of phialides bering radial chains of conidia. (2nd

    pic) ***so un ang diff this to zygo kasi magkamuka cla***

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    3. Cryptococcosis C. neoformans

    KOH/India ink shows yeast cells with wide capsule Culture 37OC:Creamy, mucoid yeast colonies;Brown to blkack

    colonies on niger/bird seed agar due to phenoloxidase

    4.Zygomycosis filamentous fungi namely: Rhizopus, Mucor, Absidia

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    KOH shows wide ribbon like aseptate hyphae branching of right angle (ung narrow or acute angle is aspergillus) Culture @ RT: Cotton candy appearance of colonies; Morphologic features identify species Rhizopus: sporangia round; sporangiospore unbranched and at nodal (1st row); Mucor: sporangia round; branch and at intermodal; columellae round to oval; rhizoid absent (2nd row) Absidia: Rudimentary, collumellae conical;branch; in between nodes (3rd row)

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    Further differentiation:

    Penicillium brush like, finger like

    Aspergillus swollen head na may fingerlike din ang dulo

    Rhizopus round sporangia, unbranched

    A. RhizopusB. MucorC. Absidia