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Surface Plasmon Resonance Biosensors Tuncer ÇOBAN

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Page 1: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Surface Plasmon Resonance Biosensors

Tuncer ÇOBAN

Page 2: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

SPR Principle

Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules.

Page 3: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Surface plasmon resonance (SPR) sensing has been demonstrated in the past decade to be an exceedingly powerful and quantitative probe of the interactions of a variety of biopolymers with various ligands, biopolymers, and membranes, including protein:ligand, protein:protein, protein:DNA and protein: membrane binding.

In a typical SPR biosensing experiment, one interactant in the interactant pair (i.e., a ligand or biomolecule) is immobilized on an SPR-active gold-coated glass slide which forms one wall of a thin flow-cell, and the other interactant in an aqueous buffer solution is induced to flow across this surface, by injecting it through this flow-cell.

Page 4: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Basic components of an instrument for SPR biosensing: A glass slide with a thin gold coating is mounted on a prism. Light passes through the prism and slide, reflects off the gold and passes back through the prism to a detector.

Changes in reflectivity versus angle or wavelength give a signal that is proportional to the volume of biopolymer bound near the surface. A flow cell allows solutions above the gold surface to be rapidly changed.

Page 5: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

When light (visible or near infrared) is shined through the glass slide and onto the gold surface at angles and wavelengths near the so-called “surface plasmon resonance” condition, the optical reflectivity of the gold changes very sensitively with the presence of biomolecules on the gold surface or in a thin coating on the gold.

The high sensitivity of the optical response is due to the fact that it is a very efficient, collective excitation of conduction electrons near the gold surface.

Page 6: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

A typical SPR biosensing experiment, showing the opticalresponse versus time: The gold surface with immobilized interactant starts in pure buffer at time 0. At 100 s,solution containing the other interactant is introduced. At 300 s, the flow cell is flushed with pure buffer, and at 420-520 s, the starting surface is regenerated with a sequence of reagents.

The extent of binding between the solution-phase interactant and the immobilized interactant is easily observed and quantified by monitoring this reflectivity change An advantage of SPR is its high sensitivity without any fluorescent or other labeling of the interactants.

Page 7: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Advantage of using gold film

Gold: Non-magnetic, surface plasmon wave is p-polarized, and due to its electromagnetic and surface propagating nature, creates enhanced evanescent wave

Page 8: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Techniques to Induce Surface Plasmon Resonance Biosensors

The SPR technique is used in the development and characterization of ultra-thin films. SPR sensor system consists of three parts: the optical system, the sensor system and the detection system.

Page 9: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Among them, optical system includes the light source and the optical path which is used to produce the incidence light meeting the performance requirements; then the sensitive information is transformed to the refractive index changes of the film by the sensor system, based on the principles mentioned above, and which can be transformed to the changes of the resonance wavelength or the resonances angle through the optical coupling action; finally by the detection system the intensity of the reflected light is detected and the position of the Resonance absorption peak is recorded for the further analysis.

Page 10: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

SPR sensor has the following advantages:

High detection sensitivity Real-time detection Anti interference capability Samples without pretreatment Rapid High-throughput analysis Less reagents and samples.

Page 11: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

The SPR sensor detection method can be divided into the following four types

Monochromatic incidence light: Changing the incidence angle, then detecting the changes

of the normalized intensity of the reflected light with the change of the incidence angle, and finally recording the incidence angle. When the reflected light intensity is minimal, the incidence angle is also called the resonance angle.

Polychromatic incidence light: The incidence angle is fixed, and the reflectivity curve is

gained with the wavelength being changed, then the resonant wavelength is recorded.

Both the wavelength and the angle of incident light are fixed;

The changes of the refractive index are analyzed by measuring the reflected light intensity.

Both the wavelength and the angle of the incident light are fixed, the phase difference of the incident light and reflected light is observed.

Page 12: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

The first two types of methods are used commonly among these four methods, the third one is less practical, and the last one has the maximum sensitivity, but with a series of high frequency circuits required.

According to the structure of the optical coupling system, the current SPR sensor system can be divided into four structural types: optical prism couplers, grating couplers, optical fiber and optical waveguides.

Page 13: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

A. Surface plasmon resonance biosensors based on optical prism couplers

The most common approach to excitation of surface plasmons is by means of a prism coupler and the attenuated total reflection method. There are two configurations of the attenuated total reflection method: Kretschmann geometry and Otto geometry.

To avoid the refractive of the incidence laser in the surface of the prism, the incidence or reflected laser is generally vertical to the prism surface. The prisms have two main formats: the isosceles triangle prism and the semicylindrical prism.

Page 14: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Fig. 1. Attenuated total reflection method based SPR sensor

The Kretschmann prism is used to measure reactions on a sensor chip attached to a prism. The apparatus consists of a sensor chip, a light source, a light detector, and a prism also referred to as the Kretschmann Prism (Fig. 1). For Kretschmann structure, a certain thick metal film at the bottom of the prism and the selective sensitive membrane are prepared to be placed above the sample pool, as the attenuated total reflection occurs in the bottom of prism, the resonance angle or resonance wavelength will be gained by detecting the intensity of reflected light, thus the presence or concentration of this analyte may be determined. Prism coupled is widely used with simple, sensitive and easy to implement.

Page 15: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

B. Surface plasmon resonance biosensors based on optical waveguides

Surface plasmons can be also excited by modes of a dielectric waveguide, and an example of a wave guiding structure integrating a dielectric waveguide and a metal dielectric waveguide is shown in Fig.2.

Its principle is very similar to that of the coupling prism of the Kretschmann structure. A mode of the dielectric waveguide propagates along the waveguide and when it enters the region with a metal film, it penetrates through the metal film and couples with a surface plasmon at the outer boundary of the metal. If the phase of SPW accords with the phase of SPW waveguide mode, SPW will inspire and SPR peak curve can be detected at the output of waveguide. This structure has a certain value with its merits such as easily-controlled, easy miniaturization and good stability, etc.

Fig.2 Dielectric waveguide based SPR sensor

Page 16: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

C. Surface plasmon resonance biosensors based on optical fibers

An optical fiber SPR sensors works by using a large diameter and multimode fiber, Cladding is removed from a portion of the fiber, and a surface plasmon metal layer is deposited instead (as Fig.3).

When optical fiber SPR sensors are used, their metal layer part is kept contact with the detective liquid. In most cases SPR sensor with high sensitivity and high resolutions can be made by improving the single mode fiber’s structure when it is used.

For it use fiber as its transmission medium with such advantages as the miniaturization, remote detection and distributed detection, high sensitivity, allowing for chemical and biological sensing in inaccessible locations, and being able to transmit optical signals over a long distance makes the use of optical fibers very attractive.

Fig.3 Fibre optic based SPR sensor

Page 17: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

D. Surface plasmon resonance biosensors based on grating couplers

Grating coupled SPR sensors is shown in figure 4, if a metal–dielectric interface is periodically distorted, the incident optical wave is diffracted forming a series of beams directed away from the surface at a variety of angles.

Fig.4 Grating couple based SPR sensor

The component of momentum of these diffracted beams along the interface differs from that of the incident wave by multiples of the grating wave vector.

If the total component of momentum along the interface of a diffracted order is equal to that of the SPW, SPR phenomenon has occurred, thus the intensity of the diffraction luminous will substantially reduce, or even disappear.

Page 18: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Therefore, the Grating coupled SPR sensors can obtain SPR peak curve by detecting the distribution of the diffraction luminous intensity.

This structure has such advantages that the senor system can realize micro and batch production by the use of the modern advanced micro-machining technology and it isn’t strict with the thickness of metal films, but mathematics involved in modeling of grating SPR-sensing structures is more complex than that for planar prism-based systems, therefore modeling of the response of grating-based SPR structures and analysis of sensor data are more difficult.

These disadvantages have strictly limited the applications of the grating coupled SPR sensors.

Page 19: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

SPR Biosensor Systems

SPR: A powerful tool for real-time, label-free analysis of biomolecular interactions

The study and characterization of molecular interactions is essential to explore biomolecular structure-function relationships, and it aids our understanding of biological systems in life sciences.

Surface Plasmon Resonance (SPR) biosensors analyze macromolecular interactions in real-time and label-free.

They have proven to be a valuable tool for scientists in many disciplines including immunology, molecular biology, cell biology and biochemistry.

Compared to conventional techniques, SPR biosensors speed up such investigations as drug development, immunoreagent quality control, cell adhesion studies and polymer- biomolecule interactions.

Page 20: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Listed below are some examples of biomolecular interactions which have been successfully studied using SPR:

Peptide/protein - protein DNA/RNA - protein protein - cell receptor - cell protein - virus/phage carbohydrate - protein carbohydrate - cell liposome - protein artificial materials - biological matter drugs - protein drugs - DNA/RNA.

In addition to biomolecular interaction studies, SPR sensors can be used to quantify adsorption and desorption processes in non-biological systems or to follow the course of solid phase-based chemical reactions on the chip surface.

Page 21: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Applications of SPR

Physical applications: measure dielectric properties, adsorption processes, surface degradation or hydration of

› Thin organic monolayers or bilayers› Polymer films

Biological applications: as biosensors for specific biological interactions including adsorption and desorption kinetics, antigen-antibody binding and epitope mapping for determination of

› Biomolecular structure and interactions of proteins, DNA & Viruses

› Lipid Bilayers› Non-specific biomolecular interactions-bio-compatibility› Tissue engineering

Page 22: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

SPR: Physical applications

Thin organic monolayers or bilayers Polymer film

Page 23: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules
Page 24: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

SPR: Biological applications

Epitope mapping

Page 25: Linear relationship is found between resonance energy and mass concentration of biochemically relevant molecules

Tissue engineering