influence of flow rate and scaffold pore size on cell behavior

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Royal College of Surgeons in Ireland e-publications@RCSI Anatomy Articles Department of Anatomy 4-1-2012 Influence of flow rate and scaffold pore size on cell behavior during mechanical stimulation in a flow perfusion bioreactor. Ryan J. McCoy Royal College of Surgeons in Ireland C Jungreuthmayer Austrian Institute of Technology Fergal O'Brien Royal College of Surgeons in Ireland, [email protected] is Article is brought to you for free and open access by the Department of Anatomy at e-publications@RCSI. It has been accepted for inclusion in Anatomy Articles by an authorized administrator of e-publications@RCSI. For more information, please contact [email protected]. Citation McCoy RJ, Jungreuthymayer C, O'Brien FJ. Influence of flow rate and scaffold pore size on cell behavior during mechanical stimulation in a flow perfusion bioreactor. Biotechnology and Bioengineering. 2012;109(6):1583-1594.

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Royal College of Surgeons in Irelande-publications@RCSI

Anatomy Articles Department of Anatomy

4-1-2012

Influence of flow rate and scaffold pore size on cellbehavior during mechanical stimulation in a flowperfusion bioreactor.Ryan J. McCoyRoyal College of Surgeons in Ireland

C JungreuthmayerAustrian Institute of Technology

Fergal O'BrienRoyal College of Surgeons in Ireland, [email protected]

This Article is brought to you for free and open access by the Departmentof Anatomy at e-publications@RCSI. It has been accepted for inclusion inAnatomy Articles by an authorized administrator of [email protected] more information, please contact [email protected].

CitationMcCoy RJ, Jungreuthymayer C, O'Brien FJ. Influence of flow rate and scaffold pore size on cell behavior during mechanicalstimulation in a flow perfusion bioreactor. Biotechnology and Bioengineering. 2012;109(6):1583-1594.

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This article is available at e-publications@RCSI: http://epubs.rcsi.ie/anatart/51

Influence of Flow-rate and Scaffold Pore Size on Cell Behaviour During

Mechanical Stimulation in a Flow Perfusion Bioreactor

McCoy, R.J. Eng.D1,2

Tel.: +353 1 402 8508;

E-mail address: [email protected]

Jungreuthmayer, C. Ph.D3,4

Phone: +43 50550 6413

Fax: +43 50550 6595

Mail: [email protected]

O’Brien, F.J. Ph.D1,2

(Corresponding Author)

Tel.: +353 1 402 2149;

fax: +353 1 402 2355.

E-mail address: [email protected]

1. Department of Anatomy

Royal College of Surgeons in Ireland

123 St. Stephen’s Green

Dublin 2

Ireland

2. Trinity Centre for Bioengineering,

Trinity College Dublin,

Dublin,

Ireland

3. Austrian Institute of Technology (AIT),

Mobility Department,

Giefinggasse 2,

1210 Vienna,

Austria

4. Austrian Centre of Industrial Biotechnology (ACIB),

Muthgasse 11/DG,

1190 Vienna,

Austria

Condensed Running Title: Cell Detachment in Highly Porous Scaffolds

Abstract

Mechanically stimulating cell-seeded scaffolds by flow-perfusion is one approach utilised for

developing clinically applicable bone graft substitutes. A key challenge is determining the

magnitude of stimuli to apply that enhances cell differentiation but minimises cell detachment

from the scaffold. In this study we employed a combined computational modelling and

experimental approach to examine how the scaffold mean pore size influences cell

attachment morphology and subsequently impacts upon cell deformation and detachment

when subjected to fluid-flow. Cell detachment from osteoblast-seeded collagen-GAG

scaffolds was evaluated experimentally across a range of scaffold pore sizes subjected to

different flow-rates and exposure times in a perfusion bioreactor. Cell detachment was found

to be proportional to flow-rate and inversely proportional to pore size. Using this data, a

theoretical model was derived that accurately predicted cell detachment as a function of mean

shear stress, mean pore size and time. Computational modelling of cell deformation in

response to fluid flow showed the percentage of cells exceeding a critical threshold of

deformation correlated with cell detachment experimentally and the majority of these cells

were of a bridging morphology (cells stretched across pores). These findings will help

researchers optimise the mean pore size of scaffolds and perfusion bioreactor operating

conditions to manage cell detachment when mechanically simulating cells via flow perfusion.

Keywords

Perfusion Bioreactor, Computational Fluid Dynamics, Finite Element Analysis, Shear Stress,

Pore Size, Cell Detachment

Introduction

Increasing limitations with respect to traditional autograft and allograft bone replacement

procedures, including the restricted amount of bone available, requirement for additional

invasive surgery, risk of infectious disease transmission and lack of available donors, is

driving research towards the development of clinically applicable bone graft substitutes. Bone

tissue-engineering approaches aim to address this unmet clinical need by using one or more

arms of the tissue-engineering triad; scaffolds, cell signalling factors and cells.

To develop bone graft substitutes the simplest methodology is to statically culture cells on

highly porous scaffolds in the presence of differentiation medium (Farrell, E et al., 2006;

Farrell et al., 2007; Keogh et al., 2010; Kim et al., 2005; St-Pierre et al., 2005; Tierney et al.,

2009). However, static culturing regimes neglect the important role of biomechanical stimuli

in the normal formation, development and homeostasis of bone tissue: the effects of which

are clearly observed when normal, physiologically relevant levels of mechanical stimulation

are removed (Morey and Baylink, 1978; Zerwekh et al., 1998). Therefore, in-vitro bone tissue

cultivation strategies have sought to enhance the osteogenic differentiation of cell-seeded

constructs by employing mechanical stimulation via flow-perfusion (Bancroft et al., 2002;

Cartmell, S. et al., 2003; Keogh et al., 2011; Sikavitsas et al., 2003; Sikavitsas et al., 2005;

Vance et al., 2005). We have successfully employed an in-house designed perfusion

bioreactor (Jaasma et al., 2008) to examine the effects of mechanical stimulation on gene

expression levels of key osteogenic markers for MC3T3 (pre-osteoblasts) cell-seeded

collagen-GAG (CG) scaffolds subjected to a range of fluid flow regimes and for exposure

times of 1h to 14 days (Jaasma and O’Brien, 2008; Partap et al., 2009; Plunkett et al., 2010).

One key challenge of such a strategy is determining the magnitude of stimuli to apply that

maximises the induction of osteogenic differentiation but minimises cell detachment.

Physical detachment of cells from a scaffold occurs when the fluid flow generated forces

acting upon the cell exceed the adhesive forces generated through integrin-matrix

interactions. It is a particularly undesirable artefact of flow perfusion regimes (Alvarez-

Barreto and Sikavitsas, 2007; Alvarez-Barreto et al., 2007; Cartmell, S. et al., 2003; Plunkett

et al., 2010) having multiple implications from scientific (cell to cell communication),

economic (cell culture costs) and clinical efficacy (minimum cell number) perspectives.

Initial cell attachment levels within highly porous collagen-based scaffolds have been shown

to be a function of the mean pore size (Murphy and O’Brien, 2010; Murphy et al., 2010;

O’Brien et al., 2005; O’Brien et al., 2007) with cells attaching in either a flat (attached to a

single strut, akin to monolayer culture (2D)) or bridged (attached to multiple struts, stretching

across void spaces within the scaffold) morphology (Annaz et al., 2004; McMahon, 2007).

The proportion of cells adopting a bridged morphology is hypothesised to increase with

decreasing mean pore size because of increased numbers of strut junctions (Harley et al.,

2008), which are believed to act as nucleation points for cell bridging. Computational

modelling has shown that bridged cells can experience up to 500 fold greater levels of

cytoskeletal deformation than flat cells under the same flow conditions (Jungreuthmayer et

al., 2009b); their alignment to the direction of flow creates a greater level of resistance and at

the extreme end of the scale one can consider them to behave like a sail in the wind. We

hypothesise it is this increased cytoskeletal deformation of bridging cells that promotes

osteogenesis at lower mean shear stress levels () (~1-100x10-3

Pa) in highly porous scaffolds

compared to 2D (0.1–1.5Pa) (McCoy and O’Brien, 2010), or scaffolds with very large pore

sizes where a flat morphology type dominates (Vance et al., 2005). Furthermore, assuming

constant cell properties (e.g integrin density), bridged cells would be expected to have fewer

integrin-matrix interactions as they have smaller surface areas of attachment, resulting in a

reduced adhesive force. This reduced adhesive force coupled with increased cell deformation

(displacement caused by the mechanical stresses trying to pull the cell away from the

scaffold) is expected to make bridging cells more susceptible to detachment. We hypothesise

this is why cell detachment is observed in highly porous scaffolds subjected to flow perfusion

at a (~1-100x10-3

Pa) well below the critical (the required to remove 50% of attached

cells) shown to detach cells in 2D (~1-100Pa). Thus we believe a critical threshold (Tc) of

cell deformation exists for bridging cells, below which cells are stimulated and above which

they are detached, and this occurs at much lower than for flat cells.

Cell detachment has been extensively studied in 2D, with studies typically conducted in one

of two ways; parallel plate flow chambers (Bouafsoun et al., 2006; Kapur and Rudolph, 1998;

van Kooten et al., 1994; Truskey and Proulx, 1993; Xiao and Truskey, 1996) or rotating

disc/flow devices (Deligianni et al., 2001; Engler et al., 2009; Garcia et al., 1997; García et

al., 1997; Goldstein and DiMilla, 2003). To date, the authors are unaware of any studies

directed at evaluating the detachment of cells cultured on highly porous scaffolds in response

to fluid-flow. Highly porous scaffolds contain exceedingly irregular geometries as a

consequence of the freeze drying (Mandal and Kundu, 2008; O’Brien et al., 2004) or salt

leaching (Kim et al., 2005) fabrication processes, resulting in non-uniform flow profiles that

make shear stress characterisation very challenging. Furthermore, technical limitations in

visualising cells internally within the construct, means correlating cell detachment to the

magnitude of shear stress at the point of detachment is exceptionally difficult.

The overall goal of this paper was to characterise cell detachment in response to fluid flow

from highly porous CG scaffolds with different mean pore sizes and evaluate the relationship

between cell loss, cell morphology and cell deformation. We employed a novel approach

(Figure 1) combining two previously developed computational models (Jungreuthmayer et

al., 2009b; Jungreuthmayer et al., 2009a) with a series of experimental investigations. A finite

volume method (FVM) approach to characterising fluid flow rates in terms of shear stress,

was used in conjunction with CT imaging of the scaffolds to accurately characterise the

shear stress distribution within each scaffold under particular bioreactor operating conditions.

This data was utilised in conjunction with experimental studies to derive a predictive model

capable of characterising cell detachment based on mean scaffold pore size, and exposure

time to flow, which was subsequently validated against previously published literature. Based

on our hypothesis that bridging cells are predominantly detached from the scaffold, we used

this experimental data to set the number of bridging cells for the second computational

model. A finite element (FE) elastostatic simulation that allowed cell deformation

(displacement) to be calculated for individual cells based on their attachment morphology and

in response to the flow perfusion conditions they experienced within the scaffold. From this a

Tc for cell deformation, beyond which cells would detach, was determined. This yielded good

correlation with experimentally observed levels of detachment with the majority of the cells

exceeding Tc having a bridged morphology.

Materials and Methods

Experimental Methodology

Scaffold Fabrication

Scaffolds were fabricated in accordance with a previously developed protocol (O’Brien et al,

2004). Briefly, a CG suspension was created by blending micro-fibrillar bovine tendon

collagen (Integra Life Sciences, Plainsboro, NJ) with chondroitin-6-sulphate sodium salt,

isolated form shark cartilage (Sigma-Aldrich, St. Louis, MO, USA) in 0.05M acetic acid

(Fisher Scientific Loughborough, Leicestershire, UK); the CG suspension was degassed

under vacuum and freeze-dried (VirTis Co., Gardiner, NY). Final freezing temperatures of -

10oC, -40

oC and -60

oC yielded scaffold sheets with mean pore sizes of 325, 120 and 85m

respectively (Haugh et al., 2010). Post-lyophilisation scaffold sheets were dehydrothermally

cross-linked at 105oC for 24h in a vacuum oven at 50 mTorr (VacuCell, MMM, Germany).

Individual scaffold discs (diameter=12.7mm; depth=3-4 mm) were punched out of the sheets

and strengthened through chemical cross-linking; scaffolds were submersed in an aqueous

solution of 14mM N-(3-dimethylaminopropyl)-N0-ethylcarbodiimide hydrochloride (EDAC)

and 5.5mM N-Hydroxysuccinimide (NHS) for 2h before being washed and stored in PBS.

Cell Culture

The pre-osteoblastic cell line, MC3T3-E1 (<passage 29), was cultured in -MEM (Sigma-

Aldrich, Ireland, Dublin) supplemented with 10% FBS (Biosera, East Sussex, UK), 1% L-

glutamine (Sigma–Aldrich) and 2% penicillin/streptomycin (Sigma–Aldrich). Cells were

maintained as sub-confluent monolayers in T175 flasks under standard conditions (37oC, 5%

CO2). Cells were detached with Trypsin–EDTA (Sigma–Aldrich) and re-suspended at a

concentration of 1x107 cells/mL. Scaffolds (85, 120 and 325m mean pore size) were seeded

with a total of 2 x 106 cells. In 6 well plates, 100 L of cell suspension was added drop-wise

onto the top surface of each scaffold and the plates placed into the incubator for 15 min to

allow for cell attachment. Scaffolds were then turned over and the procedure repeated. After

the second incubation period, 5 mL of growth media was added to each well and the scaffolds

were pre-cultured statically for 6 days (media change on day 3) (Partap et al, 2009).

Bioreactor Experiments

Constructs were then cultured in our in-house designed flow perfusion bioreactor (Jaasma et

al., 2008). During bioreactor culture, six constructs (n=2 per mean pore size) were cultured

simultaneously using a steady flow regime for 6, 24 or 48h, at either 0.05, 1 or 5mL/min.

These flow-rates were chosen as they equate to between 9x10-4

and 8.79x10-1

Pa, values

below that shown to stimulate or cause cell detachment of flatly attached cells in 2D (McCoy

and O’Brien, 2010). Thus cell detachment would be expected to be predominantly related to

bridged cells. Furthermore these have been previously shown to enhance osteogenesis of

MC3T3 cell-seeded scaffolds by our group, but resulted in cell detachment of up to 40% for

scaffolds with mean pore sizes of 120m (Jaasma and O’Brien, 2008). Static controls were

transferred to new 6-well plates and cultured in 5mL of fresh medium. Post-culture constructs

were flash frozen in liquid nitrogen and stored at -80oC until analysis.

DNA Extraction and Quantification

DNA was isolated from the constructs by homogenisation in RLT lysis buffer (Qiagen, USA)

using a rotor-stator homogeniser (Omni International). Cell lysates were centrifuged using QI

Shredder columns (Qiagen) and the supernatant stored at -800C until quantification. DNA

quantification was performed using a Quant-iT™ PicoGreen dsDNA kit (Invitrogen) in

accordance with manufacturer’s instructions. Sample fluorescence was measured (excitation

480nm, emission 538nm) and DNA concentration deduced using a standard curve.

High Resolution Scanning Electron Microscopy (HRSEM)

Constructs were prepared for HRSEM by fixation (2% gluteraldehyde/2% formaldehyde for

2h), washing (PBS) and secondary fixation (1% OsO4) for 1h, before being dehydrated in

10min stages through a series of ethanols (30%, 50%, 70%, 90%) followed by 3x20min in

100% ethanol. Constructs were chemically dried using a series of Hexamethyldisilazane in

ethanol steps (30%, 60%, 100%), sputter coated with Palladium to a nominal thickness of

7nm using a Cressington sputter coater and imaged using a Carl Zeiss Ultra scanning electron

microscope at 5kV. Images were falsely coloured (Adobe Photoshop) to highlight cells.

Computational Methodology

Computational models developed in house (Jungreuthmayer et al., 2009a; Jungreuthmayer et

al., 2009b) were used in this study. Computational fluid dynamic (CFD) simulations of fluid

flow through empty CG scaffolds were used to calculate the under different flow

conditions. These values were used for deriving a predictive equation of cell detachment.

CFD simulations of fluid flow through cell-seeded CG scaffolds were used to determine the

shear stresses and hydrostatic pressures acting on individual cells numerically seeded onto the

scaffold. These values were fed into elastostatic deformation simulations to determine the cell

deformation experienced by each cell in the cell-seeded scaffold. Mesh generation and

simulations were conducted using the opensource CFD toolbox OpenFOAM (OpenFOAM

version 1.3, OpenCFD Ltd, Reading, Berkshire, UK). Simulations and associated pre- and

post processing were conducted on a 32 bit, dual processor, 4Gb RAM system. In brief, a

three step (i, iii and iv) or five step procedure was required to successfully execute the empty

and cell-seeded models respectively; (i) scaffold reconstruction, (ii) numerical cell seeding,

(iii) mesh creation, (iv) CFD simulation and (v) elastostatic simulation. Steps ii and v were

not required for empty scaffold simulations as they involve the numerical seeding of cells

onto the scaffold and the deformation simulations of individual cells.

Scaffold Reconstruction

MicroCTCT) scans (SCANCO Medical AG, Bassersdorf, Switzerland) conducted using a

special filter technology to increase the contrast of the CG scaffolds (10,240m x 10,240m

x 520m), with a resolution of 6m x 6m x 6m, were obtained for scaffolds having mean

pore sizes of 85, 120 and 325m. Three smaller randomly chosen sub-volumes (768m x

768m x 384m) were extracted from each raw data file to lessen the associated

computational costs. The grey-scale data for each sub-volume was Gaussian rank filtered (to

reduce background noise) and subjected to a thresholding procedure that resulted in a black

(scaffold) and white (void/interstice) image of the geometry. Scaffold porosity after

thresholding was approximately 90% in all cases.

Numerical Cell Seeding

For the part of this study examining cell deformation in response to flow, scaffolds were

numerically seeded with cells using a cell seeding program developed in house

(Jungreuthmayer et al., 2009b). It uses two similar algorithms to seed cells with either

bridged or flat morphologies having minimum and maximum cell lengths of 50 and 80m

respectively; attachment lengths observed in-vitro for MC3T3 cells at high confluencies in

2D (unpublished data). This procedure was repeated until 255 cells per sub-volume were

successfully seeded onto the scaffold (equal to a cell seeding density of 5x105 cells/scaffold).

Mesh Creation

The mesh generation utility blockMesh was used to decompose the domain geometry of the

scaffold interstice into hexahedral elements. Scaffold meshes (seeded or non-seeded)

contained approximately 1.1x106 elements. Additionally, in the case of cell-seeded scaffolds

a mesh of each cell was generated (~250 elements) for use in the elastostatic simulations.

CFD Simulation

CFD simulations were performed using the laminar solver icoFoam (Transient solver for

incompressible, laminar flow of Newtonian fluids) with the settings: laminar fluid flow,

incompressible Newtonian fluid with a kinematic viscosity of 8.1x10-7

m2/s, no-slip boundary

conditions on walls, constant velocity inlet (1175, 235 and 12m/s, which correspond to the

experimental peak flow rates of 5, 1, 0.05mL/min), zero-pressure outlet, and impermeable

cell and scaffold walls. Cells were considered rigid for the CFD simulation.

Elastostatic Simulation

The cells were assumed to be an isotropic, homogeneous material with a constant Young’s

modulus of 1kPa, simplifying the complex mechanical nature of the cells to a linear elastic

behaviour (Karcher et al., 2003; Theret et al., 1988). Cell deformation was simulated as a

function of the wall shear stress and the hydrostatic wall pressure computed during the CFD

simulation; applied to the nodes of cell faces exposed to fluid flow. The nodes of cell faces

touching the scaffold were constrained: ux=uy=uz=0, where ux, uy, and uz are the

displacements of a node in x-, y-, and z-direction. This constraint yielded immobile nodes at

the cell-scaffold contact area (cells are stuck to the scaffold). Each cell was individually

deformed using the FE (finite element) solver stressFemFoam. Only cells residing within an

internal sub-volume (660m x 660m x 330m, ~130 cells) of each extracted sub-volume

were analysed to avoid potential boundary artefacts.

Results

Experimental Evaluation of Cell Detachment

Using our in-house designed flow-perfusion bioreactor system we experimentally

characterised changes in osteoblast (MC3T3) cell number, as measured by change in total

DNA quantity, for different inlet flow-rates (static, 0.05, 1, 5mL/min), across a complete

range of CG scaffolds with mean pore sizes (85, 120 and 325m) and over culture time

durations of 0, 6, 24 and 48h (Figure 2). The maximal levels of cell detachment were

proportional to flow-rate and inversely proportional to mean pore size. The most favourable

conditions, a mean pore size of 325m and a flow-rate of 0.05mL/min yielded cell

detachment of ~3% after 48h, whilst the most unforgiving set-up, a mean pore size of 85m

and a flow-rate of 5mL/min, caused ~40% of cells to detach after 48h. For scaffolds with the

larger mean pore sizes of 120 and 325m, decreases in cell number for the 48h time point

were minimal upon increasing the flow-rate from 1 to 5mL/min, suggesting that the

remaining proportion of cells are significantly less susceptible to the fluid flow forces than

the previously detached proportion; a bi-modal distribution of cell detachment, whereby we

propose the bridging cells have detached under the flow conditions studied, leaving just the

flatly attached cells bound to the scaffold.

Characterisation of Shear Stress

In order to create a predictive model of cell detachment that can be utilised across a broad

range of system types and scaffold geometries/porosities, it was firstly necessary to express

flow-rate as a more relevant engineering parameter, mean shear stress (). Computational

modelling was used to determine the shear stress distribution and within the complex

internal architecture of CG scaffolds as a function of the different mean pore sizes and flow-

rates studied experimentally. CT images of 85, 120 and 325m mean pore size scaffolds

were used to provide accurate 3D information on the scaffold architectures. Due to the highly

porous nature of the scaffolds (~90%), no variation in maximum shear stress or the shear

stress distribution were observed as a function of pore size. Example data for a flow-rate of

1mL/min is shown in Figure 3. A linear relationship was observed (=c*V; where V is the

velocity of the fluid entering the scaffold and c is a constant value of 7.5e-5 Pa.s/m) between

flow-rate and (Table 1). For all flow-rates, the maximum shear stress was approximately

one order of magnitude greater than the , however, only a very small percentage of the

scaffold/cell surface areas were exposed to these conditions as typically 95% of the

scaffold/cell surface area was subjected to shear stresses less than 3-4 times the (Figure 3).

Cell Detachment Characterisation and Validation

Mathematical functions describing the shape of the data were fitted to the experimental data

points (Supplementary material). These different functions were then condensed to form the

following equation;

t

P

P

o

Pe

Pa

CC 0766.0907.5

0124.015

exp12312.25651

1824.10003.0

0036.01

Where C = fraction of cells in the scaffold at time t, Co = the number of cell initially, is the

mean shear stress in the scaffold, P = the mean pore size and a = maximum fold change in

cell number under static conditions (amount of cell growth in the absence of flow).

We validated the equations predictive ability against previously published literature for

MC3T3 cells cultured on CG scaffolds (Jaasma and O’Brien, 2008). In the first scenario, the

derived function accurately predicted cell detachment for a complex flow regime consisting

of 1h at 1mL/min followed by 7h at 0.05mL/min, repeated over a 49h period (Figure 4). Such

cycles are typically used in our laboratory to minimise cellular desensitization to mechanical

stimulation. In the second study a continuous low flow-rate regime of 0.05mL/min was

examined over a 49h period (Figure 4). The predicted levels of cell detachment for this

regime were well within the standard deviation of the experimental study.

Cell Deformation Correlates to Cell Detachment

As shown in Figure 3, pore size was found to have no effect on the average shear stress,

maximum shear stress or the shear stress distribution for scaffolds having a constant porosity

when subjected to the same flow-rate (Figure 3). This suggests that observed differences in

cell detachment can’t be attributed to shear dependent events, such as localised high shear

zones or variations in distribution profiles that may occur within scaffolds of different mean

pore size. One characteristic that we hypothesise to vary as a function of pore size is cell

attachment morphology, thus we examined computationally whether there was any

correlation between cell morphology, deformation and detachment. Firstly, we confirmed the

capability of MC3T3 cells to form both flat and bridged morphology types in CG scaffolds

by HRSEM (Figure 5). One commonly observed bridging cell morphology was limited to

two points of attachment, whilst flat cells typically had long thin morphologies as they ran

along the edge of struts (Figure 6), validating the choice of cell shape used in our

computational modelling scheme. After 48h changes in cell numbers appear to stabilise,

suggesting that cell detachment/re-attachment dynamics have reached a plateau, thus based

on our hypothesis that bridging cells are preferentially detached, the maximal detachment

levels observed experimentally (Table 2) were assumed to equal the percentage of bridging

cells present in the scaffold at 0h. Therefore cells were numerically seeded onto CT

reconstructed scaffolds at ratios of 32% bridged to 68% flat and 23% bridged to 77% flat for

120m and 325m mean pore size scaffolds respectively. Simulations were then run using

experimentally studied flow-rates and the level of cell deformation assessed. From

computational simulations conducted for 5mL/min flow-rates for both 120 and 325m

scaffolds, the critical threshold of deformation, Tc (the level of deformation above which a

cell would be considered to detach), was determined so that the same detachment levels were

observed as seen experimentally; for both pore sizes this was approximately 30nm. The

simulation were then re-run for the other flow rates tested and the percentage of cells that

could be considered to have detached (deformation levels > 30nm) under each set of flow

conditions were calculated. These values correlated well with that of the actual cell

detachment levels based on the mathematical curve fitting of the experimental data (Figure

7). In all cases greater than 95% of the detached cells from the computational simulations

were of the bridged morphology type.

Discussion

In 2D, osteogenic differentiation is enhanced at in the range of 0.1–1.5Pa, typically well

below the lower limit associated with cell detachment (1-100Pa) (McCoy and O’Brien,

2010). In highly porous scaffolds, osteogenesis can be promoted at much lower (~1-

100x10-3

Pa), yet cell loss is a prevalent issue (McCoy and O’Brien, 2010). The overall goal

of this paper was to firstly characterise cell detachment in response to fluid flow from highly

porous CG scaffolds with different mean pore sizes, and secondly, to evaluate if the cell loss

observed could be related to cell morphology and cell deformation. The study successfully

characterised cell detachment experimentally and in combination with computational

modelling developed a model capable of accurately predicting cell detachment, the

methodologies of which may be applied to perfusion-scaffold bioreactor systems in general.

Furthermore, evidence to support the hypothesis that cell detachment can be attributed to a

bridging morphology type absent in 2D was presented.

Differences in geometrical configurations of perfusion bioreactor systems and the complex

internal architecture of scaffolds (Bancroft et al., 2002; Bonvin et al., 2010; Jaasma et al.,

2008; Wendt et al., 2003; Zhao and Ma, 2005) makes correlating observed biological

outcomes on the basis of inlet fluid flow-rate very difficult. Calculation of the within

systems allows comparisons to be made on a single representative scale. In this study we

successfully used established FVM techniques (Cioffi et al., 2006; Jungreuthmayer et al.,

2009a; Maes et al., 2009; Raimondi et al., 2006; Sandino et al., 2008), to characterise the

shear stress distribution and values within CT imaged CG scaffolds of differing mean pore

sizes under different flow-rates. Pore size was found to have no effect on the average shear

stress, maximum shear stress or the shear stress distribution for scaffolds having a constant

porosity when subjected to the same flow-rate (Figure 3). This suggests that observed

differences in cell detachment cannot be attributed to shear dependent events, such as

localised high shear zones or variations in distribution profiles that may occur within

scaffolds of different mean pore size. However, one cellular characteristic that is constant in

2D, but is expected to vary as a function of mean pore size in highly porous constructs, is cell

attachment morphology. We hypothesised that smaller pore sizes would have a higher ratio of

bridging to flat morphology types and the cell detachment observed could be attributed to

bridging cells, which are expected to be more susceptible to detachment when subjected to

flow. We confirmed the capability of the cells to form both flat and bridged morphology

types in the CG scaffolds by HRSEM (Figure 5 and Figure 6). Assuming cells cannot

spontaneously reach across a void space in order to bridge, and have a finite maximum

attachment length, then to initiate bridging cells need to be localised at junction apexes where

they can “migrate” in multiple directions along one or more struts, away from the apex, to

form a bridged morphology. For larger mean pore sizes (>150m), where the cell is

significantly smaller than the length of a scaffold strut, then the majority of cells will not be

located within the vicinity of strut junctions and hence are more likely to attach flatly.

Limited cell bridging will still occur, but will be constrained to the regions surrounding strut

junctions. As pore size decreases the density of strut junctions increases per unit volume

(Harley et al., 2008) (junctions per pore remain constant) and strut length decreases,

increasing the proportion of cells in the locality of strut junctions. Thus as pore size

decreases, a greater proportion of cells are predicted to have a bridged morphology type.

Therefore, if bridging cells are more susceptible to the shear stresses than flat cells, greater

levels of cell detachment would be expected to occur in smaller pore sized scaffolds under

equal shear stresses. This trend was noted in our data (Figure 2) supporting the hypothesis of

a role for cell morphology with respect to cell detachment. Whilst different cell morphologies

could be visualised by HRSEM (Figure 5 and 6), a limitation of this study is that a systematic

analysis quantifying the total number of cells having either bridging or flat morphologies in

different pore sized scaffolds was not conducted. This would be a very challenging

undertaking technically and thus a more simplified approach was used in this study based on

the relationship between and trends observed in experimental cell detachment levels. In

general, increasing the induced greater levels of detachment (Figure 2). However,

increasing from 0.0176 to 0.0879Pa in both 120 and 325m mean pore size scaffolds

caused minimal changes in the total cell detachment, suggesting a susceptible cell population

(bridged cells) had been detached and the remaining cells (flat cells) had significantly greater

adhesion strengths; indicative of a bi-modal distribution of cell adhesion strength. This may

be explained by surface area of attachment, where flat cells are expected to have larger

surface areas of attachment than bridged cells, so assuming uniform scaffold material

properties (ligand density) and cell characteristics (integrin expression), bridged cells would

be expected to have reduced adhesion strengths and be more susceptible to detachment. We

therefore estimated the size of the bridging population, as a function of pore size, to be equal

to cell detachment levels observed experimentally at the highest after 48h, when cell

reattachment/detachment dynamics were considered to have stabilised; 32% and 23% for

120m and 325m mean pore size scaffolds respectively.

Cell attachment morphology does not solely affect cell adhesion, it also influences cell

deformation; the degree of displacement the cell experiences in response to physical forces

caused by fluid flow. Cells have non-uniform attachment lengths or orientations to the

direction of flow, with larger cells and orientations more normal to the direction of flow

resulting in greater levels of cell deformation. Computational modelling has shown that

bridged cells experience up to 500 fold greater levels of cytoskeletal deformation than flat

cells (Jungreuthmayer et al., 2009b) under flow conditions that have been shown to promote

osteogenic differentiation, but cause cell detachment from the scaffold (Alvarez-Barreto and

Sikavitsas, 2007; Alvarez-Barreto et al., 2007; Cartmell, S. et al., 2003; Jaasma and O’Brien,

2008; Partap et al., 2009; Plunkett et al., 2010). We hypothesised the greater levels of cell

deformation experienced by bridging cells is the primary contributing factor to cell

detachment observed in cell-seeded scaffolds undergoing flow perfusion. To examine the

relationship between cell deformation, morphology and detachment, as a function of flow, we

used the information gained experimentally to set the number of bridged cells for our

computational simulations. Thus cells were numerically seeded in the computational model at

a ratio of 32% to 68% and 23% to 77% (bridged to flat) for 120m and 325m mean pore

size scaffolds respectively. Based on our experimental data that cells susceptible to

detachment should all be detached at of 0.0879Pa, the minimum deformation required to

detach 32% and 23% of cells for the 120m and 325m mean pore size scaffolds

respectively was calculated; a value equating to 30nm, the critical threshold of detachment,

Tc. Assuming that cell morphology profiles and hence adhesion strength profiles are the same

for any scaffold of a given pore size, then changes in the deformation profiles with respect to

the Tc reflect changes in cell detachment levels (Figure 8). Computational simulations were

conducted for the other used experimentally and the percentage of cells >Tc correlated well

with cell detachment (Figure7); in all cases >95% of the cells experiencing deformation

levels >30nm(detached cells) were of a bridging morphology type, supporting the hypothesis

that bridging cells are the predominant morphology type detached from highly porous

scaffolds.

Through a curve fitting approach we derived an equation capable of predicting cell

detachment based on , mean pore size and exposure time for MC3T3 cell-seeded CG

scaffolds. This predictive model was validated against previously published literature for

MC3T3 cells cultured on CG scaffolds (Jaasma and O’Brien, 2008). The predictive model

not only predicted cell loss under constant with respect to time, but could also be applied to

more complex flow regimes where the is changed with respect to time. Thus this predictive

model can be used with confidence to help understand how changes to pore size or bioreactor

operating conditions will influence detachment in MC3T3 cell-seeded CG scaffolds.

Translating this work to other systems having different scaffold properties or cell types,

would currently require the repetition of the experimental and computational work conducted

herein. However, if the scaffold properties could be incorporated into the predictive model

then repetition of the experimental work may be reduced and the power of equation derived

enhanced further. To date, what we have shown is that the combined use of such modelling

and experimental studies can be successfully applied to the development of predictive models

of cell detachment in scaffold-perfusion systems.

Finally, it is important to consider the trade-off between cell detachment and the induction of

osteogenic differentiation. Further studies need to be conducted to determine the most osteo-

inductive flow-rates. This will be a complex undertaking and is not within the scope of this

study, but we can hypothesise that if cell differentiation is triggered by cytoskeleton

deformation, then bridged cells are likely to have enhanced levels of activation in comparison

to flat cells. However, if all bridged cells were detached, then enhanced differentiation of flat

cells may still be achievable if is increased to 2D levels. Thus a bi-modal distribution for

induction of cell differentiation may also exist in response to mechanical stimulation. Either

way, researchers developing perfusion-scaffold systems can hopefully use understanding

gained from studies such as this to design scaffolds and control bioreactor operating

conditions to better control population wide responses.

Conclusion

Characterisation of cell detachment in highly porous scaffolds following mechanical

simulation in a flow perfusion bioreactors is a challenging undertaking due to the internal

complexity of scaffold architecture and the inability to visualise cells in real-time. We

employed a novel approach combining computational modelling and experimental techniques

to characterise cell detachment and demonstrated that detachment in porous scaffolds occurs

at well below those shown to cause cell detachment in 2D and attributed this to a bridging

cell morphology type not present in 2D. Furthermore, this study illustrated the potential use

of computational models in combination with experimental techniques for the development

of tissue engineered constructs.

Acknowledgements

This study has received funding from the European Research Council under the European

Community's Seventh Framework Programme (FP7/2007-2013) / ERC grant agreement n°

239685. This work was enabled by the CRANN Advanced Microscopy Laboratory [AML],

Trinity College Dublin. This work has also been supported by the Austrian BMWFJ, BMVIT,

SFG, Standortagentur Tirol, and ZIT through the Austrian FFG-COMET- Funding Program.

The authors would like to thank Prof. Dimitri Scholz and Dr. Cormac O’Connell (UCD

Conway Institute of Biomolecular and Biomedical Research) for technical assistance with

sample preparation for SEM and Colm Faulkner (Centre for Research on Adaptive

Nanostructures and Nanodevices (CRANN), Trinity College Dublin) for technical assistance

and training with respect to SEM operation.

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Figure Captions

Figure 1: Overview of the work undertaken in this publication. Computational and

experimental techniques were combined to produce a predictive mathematical model of cell

detachment in highly porous scaffolds that was validated against published literature and used

to provide insight into the role of cell morphology with respect to cell detachment.

Figure 2: Fold change in cell number as a function of scaffold pore size and flow-rate.

Cell detachment levels as a function of scaffold pore size (85 m, top; 120 m, middle; 325

m, bottom), flow-rate (, Static control; , 0.05mL/min; , 1mL/min and 5mL/min)

and exposure time were determined experimentally. A curve fitting approach was employed

to mathematically describe the data (see Supplementary Material) giving the illustrated

curves; static control (solid line); 0.05mL/min (dotted line); 1mL/min (medium dash) and

5mL/min (large dash). Error bars represent the standard deviation (n=2).

Figure 3: Pore size has no effect on mean shear stress, maximum shear stress or shear

stress distribution when porosity and flow-rate are kept constant. Scaffolds of different

mean pore sizes were reconstructed from CT images and 3 smaller sub-volumes were

extracted to reduce computational costs. All sub-volumes had a constant porosity (~90%).

CFD simulations showed no difference in (a) mean shear stress (b) maximum shear stress or

(c) shear stress distribution.

Figure 4: Comparison of predicted levels of cell detachment to published data. Predicted

levels () of cell detachment calculated from the derived predictive model (Equation 1) were

compared to published data, (Jaasma et al, 2008; ) for MC3T3s in 120m pore size

scaffolds for either a standard flow regime (top) consisting of cyclic bouts of 1h at 1mL/min

followed by 7h at 0.05mL/min, or low a flow regime (bottom), which consisted of a constant

flow-rate of 0.05mL/min. Error bars represent the standard deviation of the experimental

data.

Figure 5: High resolution scanning electron microscopy of cell morphology attachment

types in highly porous scaffolds. MC3T3 cells seeded on collagen-GAG scaffolds were

assessed by high resolution scanning electron microscopy to confirm the presence of both

bridged (c, d, e, f) and flat morphology (a, b, c) types prior to flow. Cells have been falsely

coloured to enhance their appearance. Bridging cells are shown in purple or orange and flatly

attached cells in green.

Figure 6: Comparison of experimentally observed cell morphology types and

computationally seeded cells. High resolution scanning electron microscopy images (A-C)

of bridging (purple) and flatly (green) attached cells and comparative images of numerically

cell-seed scaffolds (D,E) used for deformation modelling. Numerically cell-seeded scaffolds

were cropped three dimensionally to aid visualisation of the cells within the construct. Images

have been falsely coloured to aid cell visualisation.

Figure 7: Comparison between experimentally observed cell detachment and

computationally predicted levels as a function of deformation. Cell detachment observed

experimentally for 120m () and 325m () pore size scaffolds was compared to

computationally predicted levels as function of the percentage of cells exceeding a critical

threshold (30nm) of cell deformation for scaffold with 120m () and 325m () mean

pore sizes and for all flow-rates studied experimentally (0.05mL/min, 1mL/min and

5mL/min). Error bars show standard deviations of computational modelling studies (n=3).

Figure 8: Relationship between flow-rate, cell morphology and cell deformation.

Assuming cell morphology and adhesion profiles are equal in two scaffolds of the same pore

size, then if the minimum level of deformation (critical threshold, Tc) for detaching an entire

population (or sub-population) of cells is known (i.e all bridged cells) then reducing the flow-

rate will result in decreased shear stresses and reduced levels of cell deformation. Shifts in the

deformation profile with respect to the critical threshold will therefore reflect changes in the

proportion of the population that are detached.

Figure 1

Figure 2

Figure 3

Figure 4

Figure 5

Figure 6

Figure 7

Figure 8