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iDigBio is funded by a grant from the National Science Foundation’s Advancing Digitization of Biodiversity Collections Program. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. iDigBio External Advisory Board Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics

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Page 1: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

iDigBio is funded by a grant from the National Science Foundation’s Advancing Digitization of Biodiversity Collections Program. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.

iDigBio External Advisory BoardSummit 2017

1

State of iDigBioPrimary issues for EAB

SustainabilityData useMetrics

Page 2: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Sustainability of iDigBioIssue: What is to be sustained and at what level?How will sustainability be achieved?What are the pressing issues now?

2

Data UseIssue: What aggregated data are being used?How are they being used?How might use be increased?

Issue: What’s happening?

Metrics

Page 3: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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iDigBio

1. iDigBio’s cooperative agreement with NSF and budget extend to July 2021

2. Budget decreases annually beginning in Year 8

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Page 4: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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iDigBio

1. ADBC = 10 year program; $100 million

2. TCNs will be funded through year 10, with those in the final years likely to go at least through 2025

3. iDigBio likely to receive funding by NSFto work with these TCNs and others in thecollections community through 2025

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Page 5: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Sustainability of iDigBio

A proposal

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Page 6: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Sustainability of iDigBio

1. Become a U.S. node for GBIF

2. Transition research, E&O to FLMNH

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A proposal

Page 7: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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U.S. Biodiversity Collections

iDigBio = GBIF Node GBIF

1. Become a U.S. node for GBIF

Page 8: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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1. Services provided by a GBIF node

1. Support biodiversity data mobilization2. Support biodiversity data management

and curation 3. Support biodiversity data analysis and use 4. Coordinate the landscape of biodiversity-

related initiatives including participating in the GBIF network

Page 9: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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What does iDigBio do?

Cyber-infrastructure

Digitization & Workforce

Training

Broader Impacts

Promoting & Facilitating Research

• Enable digitization of biodiversity collections data

– Develop efficient & effective standards & workflows

– Workforce education & training via workshops/webinars

• Provide portal access to biodiversity data in a cloud computing environment

– Enable data access & discoverability

– Respond to cyberinfrastructure needs

• Promote use of biodiversity data to address key environmental and economic challenges

– Researchers, educators, general public, policy-makers, etc.

• Assist in planning for long-term sustainabilityof the national digitization network & effort

– Expand participation: partners, data sources, general public, etc.

– Proliferate and broaden uses of biodiversity data

Page 10: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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What does iDigBio do?

• Enable digitization of biodiversity collections data

1. Support biodiversity data mobilization

• Provide portal access to biodiversity data

2. Support biodiversity data management

and curation

• Facilitate use of biodiversity data

3. Support biodiversity data analysis and use

4. Coordinate biodiversity-related initiatives

Page 11: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Sustainability of iDigBio

2. Transition research, E&O to FLMNH

11

A proposal

Page 12: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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U.S. Biodiversity Collections

iDigBio = GBIF Node

Research Education Outreach

FLMNH (or Biodiversity Institute or eMuseum)

12

GBIF

2. Transition research, E&O to FLMNH

Page 13: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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U.S. Biodiversity Collections

iDigBio = GBIF Node

Research Education Outreach

FLMNH (or Biodiversity Institute or eMuseum)

13

GBIF

2. Transition research, E&O to FLMNH

Museum and external funding sources

Page 14: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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iDigBio = GBIF Node1. Project manager(Library of archived

resources)

2. Mobilizationmanager

3. Database/Portalmanager

Minimal staffingrequirements (iDigBio)

FLMNH (or Biodiversity Institute or eMuseum)

U.S. Biodiversity Collections

Research Education Outreach

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4. Training and workforce development

Page 15: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Overall issues for iDigBio & ADBC

1. Find and engage remaining collections(How many collections and specimens are there really?)

2. Funding model for ADBC

3. Improving quality of data in iDigBio, especially taxonomy

4. More response from TCNs on research & E&O

5. International collaboration

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Page 16: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Overall issues for iDigBio & ADBC

1. Find and engage remaining collections(How many collections and specimens are there really?)

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Page 17: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Specimen records in iDigBio

Page 18: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Plant records in iDigBio

Page 19: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Animal records in iDigBio

Page 20: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Progress in National Digitization Effort

60%

40%

1,386 TOTAL KNOWN U.S. COLLECTIONS

Have NOT provided data in iDigBio HAVE provided data in iDigBio

561 collections from

336 institutions

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What We Know About What We Don’t Have

Herbaria48.75%

Vertebrates15.04%

Invertebrates14.54%

Paleontology9.77%

Natural History6.89%

Geology2.01%

Genetics1.25%

Zoology0.88%

Parasitology0.63% Protista

0.25%

Breakdown of Collections in iDigBio Catalog that have NOT yet Contributed Data in iDigBio

Page 22: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Future:

iDigBio is working with 561 collections in 336 institutions

Of how many?Currently 1,386 collections in iDigBio’s Catalog of U.S. Collections (561/1,386 collections in U.S. = 41%)

Specimen records: 106 million(315 million specimens of 1 billion) one-third?

Remaining institutions are mostly small.Many remaining collections are not!

Page 23: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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Overall issues for iDigBio & ADBC

1. Find and engage remaining collections(How many collections and specimens are there really?)

2. Funding model for ADBC

3. Improving quality of data in iDigBio, especially taxonomy (next ”moonshot” for collections?)

4. More response from TCNs on research & E&O

5. International collaboration

23

Page 24: iDigBio External Advisory Board Summit 2017€¦ · Summit 2017 1 State of iDigBio Primary issues for EAB Sustainability Data use Metrics . 2 ... collections community through 2025

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5. International collaboration

1. Node for GBIF

2. Frankfurt meeting white paper to be submitted to:

“National Science Foundation Seeks Community Input on Accelerating Research through International Network-to-Network Collaboration”