how do dislocations shuffle to grow crystals?ucapikr/i16_annual_report.pdf · 2016-01-04 ·...

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How do dislocations shuffle to grow crystals? Bragg Coherent Diffraction Imaging (BCDI) is a technique which became available for X-rays with the introduction of 3rd generation, undulator-based storage rings like the Diamond Light Source. The BCDI method images crystals in three dimensions (3D) by phasing, and then inverting, the diffraction pattern surrounding one of the Bragg peaks diffracted by the crystal under examination. The particular advantage of BCDI is phase contrast imaging, where the phase of the 3D image of a crystal is attributed to the local distortions of the crystal due to the presence of lattice strains. The work of Johannes Ihli, Jesse Clark and colleagues, published in Nature Materials and reported here, used BCDI to observe screw dislocations by their characteristic spiral-shaped distortion seen within growing crystals of calcite. The dislocations were seen to move ahead of the growing {104} facets of a calcite crystal, grown in-situ from solution at the beamline. Beamline I16 Scientific Highlight The question of how dislocations move at the growing facets of a crystal was addressed by Johannes Ihli, Jesse Clark and colleagues at the I16 beamline. The I16 Materials and Magnetism beamline was built as one of the inaugural Phase I beamlines of Diamond and has operated reliably since 2007. The beamline was designed for polarization analysis of magnetic structures at low temperatures, but was built in a general enough way that other diffraction experiments were possible. Indeed the first coherent diffraction experiments ever performed in the UK took place there during its first year of operation. The only modification needed to the beamline was an extension of the detector arm of the diffractometer to carry a fine- pixel detector to record the fine fringes due to X-ray interference from the extremities of the micron-sized crystals under investigation. In 2007, the only detectors available were charge-coupled devices (CCDs), but today the Diamond- developed Merlin detector, a counting detector based on the radiation-hard MediPix 3 technology, with its 55-micron pixels, has allowed much better BCDI experiments. The high spatial coherence of the beam is attributed to the low emittance of the Diamond storage ring and is the same at all its beamlines. However, when I16 was first used for BCDI experiments, there was concern that the beamline optics, notably the focussing mirror at 30m, would spoil the coherence so the beamline was reconfigured to remove it. But later, it was realised that it is only necessary to narrow the slits near the mirror to adjust the coherence length to match the size of the sample [1]. Since this is a continuous adjustment, it means the beamline can be adapted to provide full coherent flux (as limited by the horizontal emittance) to a useful range of sample sizes. In the experiments of Ihli et al, crystals up to 3 microns in size were measured and imaged by BCDI, using support-based phasing algorithms [2] to solve the phase problem.

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Page 1: How do dislocations shuffle to grow crystals?ucapikr/I16_annual_report.pdf · 2016-01-04 · crystal and the strong asymmetry results from the presence of strain. (Bottom) BCDI images

Howdodislocationsshuffletogrowcrystals?BraggCoherentDiffractionImaging(BCDI)isatechniquewhichbecameavailableforX-rayswiththeintroductionof3rdgeneration,undulator-basedstorageringsliketheDiamondLightSource.TheBCDImethodimagescrystalsinthreedimensions(3D)byphasing,andtheninverting,thediffractionpatternsurroundingoneoftheBraggpeaksdiffractedbythecrystalunderexamination.TheparticularadvantageofBCDIisphasecontrastimaging,wherethephaseofthe3Dimageofacrystalisattributedtothelocaldistortionsofthecrystalduetothepresenceoflatticestrains.TheworkofJohannesIhli,JesseClarkandcolleagues,publishedinNatureMaterialsandreportedhere,usedBCDItoobservescrewdislocationsbytheircharacteristicspiral-shapeddistortionseenwithingrowingcrystalsofcalcite.Thedislocationswereseentomoveaheadofthegrowing{104}facetsofacalcitecrystal,grownin-situfromsolutionatthebeamline.BeamlineI16ScientificHighlightThequestionofhowdislocationsmoveatthegrowingfacetsofacrystalwasaddressedbyJohannesIhli,JesseClarkandcolleaguesattheI16beamline.TheI16MaterialsandMagnetismbeamlinewasbuiltasoneoftheinauguralPhaseIbeamlinesofDiamondandhasoperatedreliablysince2007.Thebeamlinewasdesignedforpolarizationanalysisofmagneticstructuresatlowtemperatures,butwasbuiltinageneralenoughwaythatotherdiffractionexperimentswerepossible.IndeedthefirstcoherentdiffractionexperimentseverperformedintheUKtookplacethereduringitsfirstyearofoperation.Theonlymodificationneededtothebeamlinewasanextensionofthedetectorarmofthediffractometertocarryafine-pixeldetectortorecordthefinefringesduetoX-rayinterferencefromtheextremitiesofthemicron-sizedcrystalsunderinvestigation.In2007,theonlydetectorsavailablewerecharge-coupleddevices(CCDs),buttodaytheDiamond-developedMerlindetector,acountingdetectorbasedontheradiation-hardMediPix3technology,withits55-micronpixels,hasallowedmuchbetterBCDIexperiments.ThehighspatialcoherenceofthebeamisattributedtothelowemittanceoftheDiamondstorageringandisthesameatallitsbeamlines.However,whenI16wasfirstusedforBCDIexperiments,therewasconcernthatthebeamlineoptics,notablythefocussingmirrorat30m,wouldspoilthecoherencesothebeamlinewasreconfiguredtoremoveit.Butlater,itwasrealisedthatitisonlynecessarytonarrowtheslitsnearthemirrortoadjustthecoherencelengthtomatchthesizeofthesample[1].Sincethisisacontinuousadjustment,itmeansthebeamlinecanbeadaptedtoprovidefullcoherentflux(aslimitedbythehorizontalemittance)toausefulrangeofsamplesizes.IntheexperimentsofIhlietal,crystalsupto3micronsinsizeweremeasuredandimagedbyBCDI,usingsupport-basedphasingalgorithms[2]tosolvethephaseproblem.

Page 2: How do dislocations shuffle to grow crystals?ucapikr/I16_annual_report.pdf · 2016-01-04 · crystal and the strong asymmetry results from the presence of strain. (Bottom) BCDI images

Figure1.(Top)exampleofacalcitediffractionpatternmeasuredatoneofthe{104}Braggpeaks.Thefringesresultfromcoherentinterferencefromoppositesidesifthecrystalandthestrongasymmetryresultsfromthepresenceofstrain.(Bottom)BCDIimagesofacalcitecrystalattwotimesduringitsgrowthfromsolution.Notetheincreaseinsizeofthecrystalfrom1.5micronsto2.5micronsandthatthehighlighteddislocationsmigratewithitsgrowingoutersurface.TypicalBCDIdatacollectedwiththeMerlindetectorareshowninFig1.Aclassicalinterferencefringepatterncanbeseen,whichresultsfromthewellformedfacetsofthecrystal.Thedataareclearlyoversampledonthedetector,asrequiredforthephasingcalculation[2],sincethereareseveralpixelsvisiblewithineachfringe.Thefull3Ddatasetcontained101suchframesspanningtheentirewidthoftherockingcurveinanglestepsof0.003°.This3DvolumeofreciprocalspaceisthecompleteFouriertransformoftheimagedvolumeofthecrystal,followinganappropriatecoordinatetransformation.ThelowerpanelofFig1showsatranslucentblueisosurfaceviewofthecrystalshapeattwotimesduringthecrystalgrowth.Someofthecrystalfacetsareflatwhilethefacetpointingtowardsthetopofthepageisclearlyrougher.Betweenthetwotimes,thisroughfacetisfoundtogrowfasterthantheflatterones.Alsoshownsuperimposedonthepictureisanetworkofdislocations,identifiedbythenodallineoflowdensitypassingdowntheircore.Thedislocationshavebeenhighlightedasisosurfacetubesandcolouredaccordingtotheimagephase,whichisidentified

Page 3: How do dislocations shuffle to grow crystals?ucapikr/I16_annual_report.pdf · 2016-01-04 · crystal and the strong asymmetry results from the presence of strain. (Bottom) BCDI images

withtheprojectionofthelocallatticedisplacementalongthediffractionQ-vector.Thecolourscale,runningfrombluetored,correspondstoa2πphasechangeoradisplacementofonelatticespacing.Eventhoughtheoverallimageresolutionisonlyaround30nm,thephasemeasurementisverysensitivetodisplacements,i.e.strains,onthepicometrescale.Mostofthedislocationsarecongregatedontherapidlygrowingtopsurfaceofthecrystal,suggestingtheyplayaroleinthematerialtransportprocessesassociatedwithcrystalgrowth.

Figure2.(Left)cornerviewofacalcitecrystalwiththreescrewdislocationshighlightedbyisosurfacesdrawnsurroundingtheirnodallines.ThesurfacesofthesetubesarecolouredwiththeBCDIphase,whichvariesby2πaroundtheloop,correspondingtoanetdisplacementofonelatticeconstrant.Thephasescalerunsfrom–π(blue)to+π(red).(Right)comparisonoftheexperimentallyobserveddisplacementasafunctionofazimuthalanglearoundthreeexamplesofdislocationsincomparisonwiththetheoreticaldependence(black)oftheprojecteddisplacementforanidealscrewinanisotropicmedium[3].Fig2showsanenlargedviewofthreeofthesedislocationswherethephaseisseentorotateuniformlyaroundthesurfaceoftheillustrativetube.TherightsideofFig2showstypicalextractedvaluesofthedisplacementofthelatticemeasuredatthreelocations,areshownasafunctionofazimuthalangle,θ,measuredaroundthedislocationcore,identifiedbythenodallineintheimageamplitude.Thetrendisclearlylinear,inagreementwiththesimpleelastictheoryofthestructureofascrewdislocation[3],shownastheblackfittingcurveinFig2.Sourcepublication:Three-dimensionalimagingofdislocationpropagationduringcrystalgrowthanddissolution,J.N.Clark,J.Ihli,A.S.Schenk,Y-YKim,A.N.Kulak,J.M.Campbell,G.Nisbet,F.C.MeldrumandI.K.Robinson,NatureMaterials14780-784(2015)References:

Page 4: How do dislocations shuffle to grow crystals?ucapikr/I16_annual_report.pdf · 2016-01-04 · crystal and the strong asymmetry results from the presence of strain. (Bottom) BCDI images

1.Robinson,I.K.OptimisationofCoherentX-rayDiffractionImagingatUltrabrightSynchrotronSources,ZeitschriftfurKristallographieSuppl2727-35(2008)2.Fienup,J.R.Phaseretrievalalgorithms-acomparison.AppliedOptics21,2758-2769(1982).3.Hirth,J.P.andLothe,J.TheoryofDislocations(McGraw-Hill,1968).Fundingacknowledgements:ERCAdvancedGrant227711“Explorationofstrainsinsyntheticnanocrystals”,EPSRCLeadershipFellowshipandaVolkswagenFellowship.EPSRCProgrammeGrantEP/I001514/1,andEPSRCgrantsEP/I022562/1,EP/J018589/1andEP/K006304/1Correspondingauthor:ProfessorIanRobinson,UniversityCollegeLondon;ResearchComplexatHarwell;TongjiUniversity,[email protected]