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www.eu-openscreen.euwww.eu-openscreen.eu
Initiative for a Initiative for a European Research Infrastructure of OpenEuropean Research Infrastructure of OpenScreening Platforms for Chemical BiologyScreening Platforms for Chemical Biology
Partners of preparatory phase project
• NOR-OPENSCREEN• Swedish Chemical Biology Consortium• Drug Discovery and Chemical Biology
network Finnland• Danish Chemical Biology Initiative• Dutch Chemical Library Program• ChemBioNet Germany• POL-OPENSCREEN• CZ-OPENSCREEN and Czech ChemGen• Austrian PLACEBO• Spanish ChemBioBank• French Chimiothèque Nationale, Réseau
Nationale de Criblage, FR-OPENSCREEN• Romanian Chemical Biology Net• Flemish Network on Chemical Biology• Collezione Nazionale dei Composti Chimici e
Centro Screening
Current partners Associated members
Coordination Centre at FMP Berlin
EU-OPENSCREEN builds on national networks in 14 European countries.
Investigation of biological systems using chemical tools
Chemical Biology
IQPC Drug Discovery Partnerships February 2013Page 318/04/23 3
Infrastructures for the European Research Area
Physics
AstronomyInformationTechnology
Biological & Medical SciencesUnderstanding the principles of life
Social Sciences“Modern research in all scientific fields requires expensive instruments and resources, and is characterised by a
continuous interplay between new scientific challenges and our technical responses to
them.“ (ESFRI report)
Infrastructures for the European Research Area
European Strategy Forum on Research Infrastructures (ESFRI)Set up in 2002 by the Competitiveness Council.
Meeting of Senior Representatives for informal consultations on strategic issues related to research infrastructures (RI).
Independent from the European Commission.
2004: Mandate to develop a European Strategic Roadmap for Research Infrastructures - to describe the needs for the next 10 to 20 years - to identify vital new European research infrastructures.
Infrastructures for the European Research Area
ESFRI Roadmap
Published in October 2006, updated in 2008 and 2010.
Will be used to facilitate decision-making by member
states and EC.
Will not prioritise or decide on funding and locations.
Four areas: Physical Sciences and Engineering (PSE),
Biological and Medical Sciences (BMS), Social Sciences
and Humanities (SSH), Environment (ENV).
Total: 48 ESFRI infrastructures.
18/04/23 7
ESFRI BMS – Fields of Activity
Biological Sciences
Biological Resources & Production Systems
Medical Sciences
Bio Banking & Molecular Resources
Functional Genomics in the Mouse
Systems Biology
High Security Laboratories
Clinical Research
Translational Medicine
Structural BiologyMarine Biology
Ecosystems
Chemical Biology (EU-OPENSCREEN)
Bioinformatics
Imaging
Microbial Resources
ESFRI BMS – Fields of Activity
Towards supporting aninnovation chain without gaps
MIRRI
ANAEE ISBE
The EU-OPENSCREEN database will be linked to other biological databases through ELIXIR: BioMedBridges
Compounds with potential as drug candidates can be further developed through EATRIS and ECRIN
Cell-lines and animal models for bioprofiling of compounds are available through BBMRI and INFRAFRONTIER (BMS-RI) support
Natural products from MIRRI and EMBRC.
A pan-European infrastructure to...
accelerate the discovery of biologically active substances in all areas of the life sciences
facilitate transnational access to the most advanced technologies, chemical and biological resources, knowledge and expertise
advance the elucidation of the molecular mechanisms of complex biological processes
increase knowledge on the bio-activities of chemical substances, as well as the responses of biological systems to these substances
promote the availability of safe and efficacious chemical products for unmet needs in medicine, nutrition, agriculture, environment
EU-OPENSCREEN’s Mission
THE PREPARATORY PHASE PROJECT
Ph
ys
ica
l in
fra
str
uc
ture
WP12Chem&
BioInformatics
WP6Governance
structure
WP7Financial plan
WP3Training and
education
WP5Strategy
WP2Standardisation
WP11TechnologyResources
WP9Chemical
Resources
WP10Biology
Resources
WP4Disseminationand outreach
WP8IPR issues
AdvisoryBoardW
P1
Ma
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ge
me
nt
an
d c
oo
rdin
ati
on
MGTSupportTeam
Ste
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ng
Co
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itte
e
Advisory Board
Prof. Dr. Dr. Ernst Rietschel, former president of the Leibniz Association of
Research centres (WGL), now acatech - National Academy of Science and Engineering (technology advisor for the German federal government)
Prof. Dr. Ferran Sanz, Director of GRIB (Research Group in Biomedical Informatics) at IMIM (Municipal Institute for Medical Research) in Barcelona. He is also a member of the Scientific Advisory Board for the Innovative Medicines Initiative (IMI).
Prof Dr. Serge Braun, scientific director of the Association Francaise contre les Myopathies (AFM)
Dr. Steve Rees, VP of Screening Sciences, AstraZeneca (AZ)
Expert Groups
Chemical Diversity Group (WP9) chaired by Dr. Michael Foley, Broad Institute, USA
Innovative Target & Assay Group (WP10) chaired by Sir Philip Cohen, UK
Industrial Advisory Group (WP5) chaired by Dr. Philip Gribbon, European ScreeningPort; members: J. Everett (f. Pfizer), J. Kihlberg (Univ. Uppsala, former AZ), T. Langer (Prestwick), H-U. Stilz (SA)
EU-OPENSCREEN Strategy Group (WP5) chaired by Dr. James Inglese, Chemical Genomics Centre, NIH, USA
OBJECTIVES
EU-OPENSCREEN´s objective is the development of novel research ‘tool’ compounds for all fields of the Life Sciences. Tool compounds enable researchers to investigate molecular mechanisms of physiological
and pathological processes, many of which can only be studied with these chemical ‘tools’
Chemical tools complement methods of molecular biology, such as mutagenesis or RNA interference
All generated tools and data are made publically available to the scientific community
Chemical compounds, such as this small molecule, can bind to cellular structures (e.g. proteins) and modulate their functions.
Chemical keys for life’s locks
A Chemical Biology InfrastructureServing research in all Life Sciences
No Life Without Chemistry
Service Portfolio
EU-OPENSCREEN will provide services to support the development of tool compounds at all stages
LAYOUT OF RI
ChemistryCompounds
BiologyAssays & Targetsmeets
Partner SitesScreening Technology
Compound Profiling
Chemistry Services
Compound Management
EU-OPENSCREEN-ERICCompound Collection
Project Management
Database
Training & Education
User User
Activityprofiles
Toolcompounds
EU-OPENSCREEN integrates Europe´s expert resources and facilities into its unique concept of a knowledge-creating Chemical Biology Centre and supports all stages of tool development projects in an RI ‘open’ for external researchers.
Service contracts
The European Chemical Biology Library ECBL will - be designed and built on the expert knowledge of European chemists
- cover unbiased chemical diversity with an expected size of 200k to 300k compounds
- be driven by the prospect of bioactivity, intellectual curiosity, uniqueness, and the goal of generating knowledge (not necessarily new chemical entities, NCEs)
- be composed to optimally serve the community and its needs; will contain selections from academic chemistry labs, commercial collections, known drugs, natural products, environmentals, etc.
- be quality controlled by approved standard method (LC-MS)
- be fully profiled with a set of basic properties (biophysical, cellular cytotoxicity, antimicrobial)
- be systematically profiled against hundreds of assays conducted by the network of screening centres.
UNIQUE ERIC ELEMENTS
UNIQUE EUROPEAN ASSETS
The European Chemical Biology Database (ECBD) will be a web portal with powerful search and analysis capabilities:• contains validated output from screening centres in a public as well as pre-
release environment.
• supports curation, annotation and organization of data + metadata.
• data deposition with flexible privacy model for rapid and safe dissemination and exploitation. Optional hold period of 18 months for data publication.
• The broadest possible use of data through public accessibility and dissemination. Public data also freely available for complete download, redistribution.
• High standards of security and traceability of IP (citable indexing of data points (EUOS, DOI or URL). Links to originator labs for primary raw unprocessed data.
• Links to SAR (e.g. ChEMBL), Chemical Structure (e.g. PubChem), and Target (e.g. UniProt) resources. Links established with new NIH-funded BARD resource.
Project Selection
TOOL COMPOUND
Projects are evaluated by external reviewers and implemented according to milestones along a defined timeline.
Validated chemical structure
Extensive basic Bio-profile
Bioactivity data from hundreds of assays
BUDGET (LIMITED CAPACITY)
The required minimum budget for EU-OPENSCREEN is modest and shared between member countries.
Upgrade 1
Upgrade 2
Upgrade 3
Upgrade 4
Upgrade 5
45 m€ already invested
Service site upgrades
National funding
Office
ECBL
ECBD
Training
Central costs(6 years)
Shared funding~ 27 m €
(e.g. GDP-share)
Project costs(6 years)
Shared funding~ 30 m €
(e.g. GDP-share,cost ceiling)
Shared funding ofMember countries
BUDGET (FULL CAPACITY)
The required minimum budget for EU-OPENSCREEN is modest and shared between member countries.
Upgrade 1
Upgrade 2
Upgrade 3
Upgrade 4
Upgrade 5
45 m€ already invested
Service site upgrades
National funding
Office
ECBL
ECBD
Training
Central costs(6 years)
Shared funding~ 27 M €
(e.g. GDP-share)
Project costs(6 years)
Shared funding ofMember countries
EU-funding to EU-OPENSCREEN
Users(research grants, in addition to EU-grants)
EU-funding to users (research grants)
Diversefundingsources~ 60 m€
ADDED VALUE
Without EU-OPENSCREEN:Limited chance of finding a hit against a
target from local or national compound collections
FR
UK
DE
ES
IT
x
Compounds
Tar
gets
With EU-OPENSCREEN:European Scale Advantage: Exponential
increase of the likelihood of finding a hit against a target from a national compound collection
Tar
gets
FR
UK
DE
ES
IT
x
CompoundsHit
French compound
Sp
an
ish
ta
rge
t
EU-OPENSCREEN´s ‘open’ character: large pool of external biologists and chemists provide wide range of expertise, assays and diverse
compounds.
ADDED VALUE
Without EU-OPENSCREEN:Limited chance of finding a hit against a
target from local or national compound collections
FRUK
DEES
ITx
Compounds
Tar
gets
With EU-OPENSCREEN:European Scale Advantage: Exponential
increase of the likelihood of finding a hit against a target from a national compound collection
Tar
gets
FR
UK
DE
ES
IT
x
CompoundsHit
French compound
Sp
an
ish
ta
rge
t
EU-OPENSCREEN´s ‘open’ character: large pool of external biologists and chemists provide wide range of expertise, assays and diverse
compounds.
Human Genome Organisation
Structural Genomics Consortium
EU-OPENSCREEN
OutputSequence data of human genomes
Human protein structures
Novel tool compounds for LifeSciences
Model Not-for-profit Not-for-profit Not-for-profit
Data policy Open-access Open-access Open-access
Impact
Advancing our understanding of biological processes.
New approaches to disease treatment, diagnosis,
prevention
Advancing our understanding of biological processes.
New approaches to disease treatment
Advancing our understanding of biological processes.
New druggable targets for disease treatment
In the Life Sciences, large-scale open-access research consortia have already proven fundamental to breakthroughs in their fields.
Weigelt (2009): “The case for open-access chemical biology. A strategy for pre-competitive medicinal chemistry to promote drug discovery.” EMBO Rep. 10: 941–945
IMPACT ON SCIENCE
Stevens, A.J. et al., 2011, N ENGL J MED 364:535-541.
IMPACT ON DRUG DISCOVERY
Public Sector Research Institutions (PSRI) contribute particularly to new NCEs and new indications .
TIMELINE
• ESFRI Roadmap: ESFRI considers EU-OPENSCREEN as vital to the excellence of research and innovation in Europe and included it on the “European Roadmap of Research Infrastructures”.
• Preparatory Phase (3 years): Preparation of a business plan describing in detail the mode of construction and operation. MoU signed. EU funding: 3.7 M€.
• Interim Phase (1-1.5 years): ERIC application and approval. Institutional funding.
• Construction Phase (1 year): Construction of infrastructure (existing and new sites). National funding.
• Operation Phase: Active infrastructure with access for researchers. Diverse funding sources.
Roadmap Interim Construction OperationPreparation
Now in the 3rd year of its Preparatory Phase, EU-OPENSCREEN will initiate construction and operation in 2014-2015.
• EU-OPENSCREEN in 3rd year of Preparatory Phase: Challenge before Construction and Operation Phases is the securing of (financial) commitment of member countries
• Timelines of member countries vary: Transition Committee for the time between the end of the Preparatory Phase and the start of the Construction and Operation Phases will be formed
• EU-OPENSCREEN included on several nationalRoadmaps
• MoU document , financial plan, funding strategy, draft ERIC statutes and draft Business Plan
already available
CURRENT STATUSAND NEXT STEPS
EU-OPENSCREEN was included on several national roadmaps and is now initiating negotiations with governments and funding organisations.
EU-OPENSCREEN – Executive Summary August 2013Page 27
On national Roadmap start negotiations
Decision expected in 2013
18/04/23 28
Tuesday, 19 Nov – Project Meeting 09:00-13:00 General Assembly meeting (project participants) 14:30-18:00 EU-OPENSCREEN outreach and synergies (invited guests) Interactions with representatives of other ESFRI infrastructures, JPI's and IMI´s European Lead Factory 19:30 EU-OPENSCREEN networking dinner
Wednesday, 20 Nov – Stakeholder Meeting 09:30-16:00 EU-OPENSCREEN Science Day (open)
- 3 presentations from EU-OPENSCREEN- 6 reports on flagship projects
13:00-16:00 Transition Committee Meeting (closed)
Next Project & Stakeholder Meeting
OsloNorway
Thank you for your attention
THE TEAM
www.eu-openscreen.eu