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GENE EXPRESSION

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Page 1: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

GENE

EXPRESSION

Page 2: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What is DNA Replication?• DNA Replication – the process of

creating copies of DNA molecules

Why is DNA Repliction SEMI CONSERVATIVE?– DNA Replication is SEMI-

CONSERVATIVE (each strand of the original DNA molecule serves as a template for the two new DNA molecules)

Page 3: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

• Thymine and cytosine each have one ringThymine and cytosine each have one ring

C

C

C

C

N

N

OO

OO

thyminethymine

C

C

C

C

C

N

N

OO

OO

thyminethymine

C

C

C

C

N

N

OO

OO

thyminethymine

C

C

C

C

C

N

N

OO

N

cytosinecytosine

C

C

C

C

N

N

OO

N

cytosinecytosine

One ring

Page 4: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

• Adenine and guanine each have two ringsAdenine and guanine each have two rings

C

C

C

C

N

N

OO

N

GuanineGuanine N

N

C

C

C

C

C

N

N

OO

N

GuanineGuanine

C

C

C

C

N

N

OO

N

C

C

C

C

N

N

OO

N

GuanineGuanine N

N

C

C

C

C

C

N

N

N

AdenineAdenine N

N

C

C

C

C

C

N

N

N

AdenineAdenine

C

C

C

C

N

N

N

C

C

C

C

N

N

N

AdenineAdenine N

N

C

Two rings

Page 5: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Hydrogen Bonds

• When making hydrogen bonds, a double ring always pairs with a single ring

• A – T

• C – G

C

C

CC

N

N

N

N

N

C

C

C

C

C

N

N

OO

OO

C

C

C

CC

N

N

N

N

N

C

C

C

CC

N

N

N

C

C

CC

N

N

N

C

C

CC

N

N

N

N

N

C

C

C

C

C

N

N

OO

OO

C

C

C

C

C

N

N

OO

OO

C

Page 6: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

DNA Replication: Simplified

DNA Replication = 3 steps

Page 7: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What are the 3 steps of DNA Replication?

DNA Replication = 3 steps

1. Unzip DNA

2. Add free nucleotides

3. Re-zip new strands to old strands

Page 8: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Enzymes Play an Important Role!

• Enzyme #1 = helicase

(unwinds DNA)

Many enzymes help DNA replicateEnzymes are proteins

Page 9: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Many enzymes help DNA replicateEnzymes are proteins

• Enzyme #2 = DNA Polymerase

(add new nucleotides, “proofreads”

for mistakes

Enzymes Play an Important Role!

Page 10: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

So...exactly HOW do we use our DNA?• Our DNA sequences serve as a code!

• ACTGGGACTACCATTGA

• We take this information and make RNA molecules, which help us to make proteins!

Page 11: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

DNA Review:Try to fill in the blanks:

1. A nucleotide is made of three parts:

______________ , __________________,

and one of the _______ pairs.

2. The nucleotides are combined together to

create a __________ acid, and ______ is

an example of this.

Page 12: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Review:

1. A nucleotide is made of three parts:

DEOXYRIBOSE SUGAR__ ,

_PHOSPHATE_, and one of the __BASE _

pairs.

2. The nucleotides are combined together to

create a _NUCLEIC_ acid, and _DNA_ is

an example of this.

Page 13: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

More about Nucleic Acids!

• We’ve already learned about one important nucleic acid, DNA. Today, we’ll explore the second nucleic acid…

• RNA!!

Page 14: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

RNA NOTES

Page 15: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

How is RNA different from DNA?

Three differences from DNA:

1. RNA = one strand (DNA = two strands)

2. RNA has the sugar ribose (DNA has the sugar deoxyribose)

3. RNA uses uracil [U] instead of thymine (DNA = A, T, G, C RNA = A, U, G, C )

Page 16: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

DNA vs. RNA

Deoxyribose Sugar Ribose Sugar

Double Stranded Single Stranded

(usually) (usually)

THYMINE base URACIL base

1 type of DNA 3 types of RNA

(mRNA, rRNA, tRNA)

Examples of Nucleic Acids

Made of Nucleotides

Code for Information

Page 17: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

DNA

RNA

Page 18: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What are the 3 types of RNA?3 types of RNA:

• Messenger RNA (mRNA) carries the genetic message

• Transfer RNA (tRNA) transfers amino acids

• Ribosomal RNA (rRNA) makes ribosomes

Page 19: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

D N A

Transcription

Page 20: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What is Transcription?transcribe = “to copy”

The genetic code on DNA is copied to RNA in the nucleus

Why does it happen in the nucleus?Original DNA cannot pass through the nuclear membrane, so a smaller copy is made and transported

Page 21: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

• Where in the cell does transcription happen?• The nucleus!

• Why does it happen in the nucleus?• Original DNA cannot pass through the nuclear

membrane, so a smaller copy is made and transported

Page 22: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

How does Transcription happen?

1. RNA polymerase unwinds DNA

2. RNA polymerase adds RNA nucleotides

(A U, G C)

3. mRNA is formed! DNA reforms a double helix

Page 23: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Transcription recap…

• RNA polymerase makes RNA using DNA sequence

• RNA leaves the nucleus for the cytoplasm

Page 24: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

TranslationWhere does it go from there?

Into the great beyond?

Page 25: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

To a ribosome! (Floating in cytoplasm)

Page 26: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

At this point you only knew ribosome's as little dots in the cell… now you will learn their big purpose!

Turning RNA into the proteins that make up your hair, skin, muscles, nails etc!

Page 27: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What is translation?

• Ribosomes translate mRNA into an amino acid sequence

• Amino acids form proteins

Page 28: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What is a Codon?Codons = 3 nucleotides in a row

Ribosome recognizes a codon on mRNA and matches to the aniticodon on tRNA

A C G

anticodon

amino acid

How are codons used?

Page 29: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

How do tRNA and anticodons work together?

Transfer RNA transfers amino acids from the cytoplasm to a ribosome

Anticodon = 3 nucleotides on one end of a tRNA

Anticodons base pair with complementary bases on mRNA

A C G

anticodon

amino acid

Page 30: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Codons

Codon triplets code for 1 of 20 amino acids

Page 31: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

1 “start” codon 3 “stop” codons

Codons

Page 32: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

1. mRNA attaches to ribosome

mRNA

Page 33: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

2. tRNAs add amino acids based on how anticodons match to mRNA

mRNA

Page 34: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 35: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 36: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 37: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 38: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 39: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 40: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 41: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

mRNA

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 42: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

2. tRNAs add amino acids based on how anticodons match to mRNA

Page 43: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

3. Protein is released from ribosomes!

Protein chain

Stop codon

Page 44: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Steps of Translation

Protein chain

3. Protein is released from ribosomes!

Page 45: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What process turns DNA into RNA?

•Transcription!!

Page 46: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What process turns RNA into PROTEIN?

•Translation!!

Page 47: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

What do amino acids build?

•Protein!!

Page 48: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Summary

DNA

RNA

PROTEIN

(Transcription)

(Translation)

Page 49: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Gene Expression Practice1.DNA sequence: AAC TGA CTG ATT GCA TGC

• What is the complementary DNA sequence?

• What is the complementary RNA sequence?

• What are the amino acids for this sequence?

2.DNA sequence: TAG CAT TGG GCA TCA CGA

• What is the complementary DNA sequence?

• What is the complementary RNA sequence?

• What are the amino acids for this sequence?

TTG ACT GAC TAA CGT ACG

UUG ACU GAC UAA CGU ACG

ATC GTA ACC CGT AGT GCT

AUC GUA ACC CGU AGU GCU

Page 50: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Determine the amino acids for this strand of mRNA:AUG GCA AGU UCU UGA

EXIT QUIZ

Met – Ala – Ser – Ser – STOP(Use genetic code table on page 186-Turtle or p. 526)

Page 51: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Determine the amino acids for this strand of mRNA:UGU AGA GAU CUC UAA

Practice

Cys – Arg – Asp – Leu – STOP(Use genetic code table on page 186-Turtle or p. 526)

Page 52: GENE EXPRESSION. What is DNA Replication? DNA Replication – the process of creating copies of DNA molecules Why is DNA Repliction SEMI CONSERVATIVE? –DNA

Big PictureGene Expression Short Essay

• Take one of the gene expression pictures and staple or tape it to a piece of paper (you may also choose to draw this out).

• Explain in your own words how DNA is used to make proteins including a brief description of DNA replication, transcription, and translation.