functionalized polymers and conjugation efficiency

1
Functionalized Polymers and Conjugation Efficiency Karla Mendoza, Clare LeGuyader, Nathan Gianneschi* Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0378 PFP Monomer NHS Polymer via ROMP PFP Polymer via ROMP Synthesizing functionalized polymers has a variety of uses in the field of nanotechnology and biotechnology. The method consists of polymerizing specific monomers via ring-opening metathesis polymerization (ROMP). Grubb’s 3 rd generation catalyst is a fast- initiating catalyst that has been found to be particularly effective for polymerization due to its ability to work with an array of functional groups. Pentafluorophenol (PFP) is useful in peptide synthesis, soluble in many organic solvents; meanwhile N- Hydroxysuccinimide (NHS) is used as an activating agent for carboxylic acids. Once polymers are synthesized, dialysis may be performed to produce amphiphilic micelles of ranging morphologies and functions which may be useful in aiding biological functions. Also, the efficiency of the conjugation of amines on to the polymer is important for peptide synthesis and its effect in a living organism. PFP Polymerization with Grubb’s 3 rd Generation Catalyst Future Directions Conclusions Grubb’s 3 rd Generation Catalyst Conjugation of Biphenyl and Pyrene Amines on NHS Polymer y = 12951x + 0.0468 R² = 0.9986 0 0.2 0.4 0.6 0.8 1 1.2 1.4 1.6 0 0.00002 0.00004 0.00006 0.00008 0.0001 0.00012 Absorbance (AU) Concentration (M) Free Pyrene Absorbance Curve λ Max Abs = 335nm Linear (Pyrene 335nm) Introduction y = 11609x + 0.0549 R² = 0.9986 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0 0.00001 0.00002 0.00003 0.00004 0.00005 0.00006 0.00007 Absorbance (AU) Concentration (M) Free Biphenyl Absorbance Curve λ Max Abs = 270nm biphenyl -1.5 -1 -0.5 0 0.5 1 1.5 -5 0 5 10 15 20 25 30 35 40 Signal Intensity Time (minutes) A69A: Biphenyl, .78 eq. A69A LS A69A UV A69A RI -1.5 -1 -0.5 0 0.5 1 1.5 -5 0 5 10 15 20 25 30 35 40 Signal Intensity Time (minutes) A69B: Biphenyl, 1.56 eq. A69B LS A69B UV A69B RI -1 -0.8 -0.6 -0.4 -0.2 0 0.2 0.4 0.6 0.8 1 1.2 -5 0 5 10 15 20 25 30 35 40 Signal Intensity Time (minutes) A70A: Pyrene, 1 eq. A70A LS A70A UV A70A RI -1.5 -1 -0.5 0 0.5 1 1.5 -5 0 5 10 15 20 25 30 35 40 Signal Intensity Time (minutes) A70B: Pyrene, 2eq. A70B LS A70B UV A70B RI An experiment was performed to produce an NHS Terminating Agent by reacting the NHS monomer in DCC and carboxylic acid in dry DMF under nitrogen. After an hour, promising results were yielded. There was a color change from dark yellow to bright yellow. To test the polymerization of the PFP monomer,, a time course NMR study was taken. At time t=0 only the monomer was present. The Grubb’s catalyst solution was added to the monomer solution causing a color change from bright green to brown, indicating polymerization. The monomer fully polymerized in 12 minutes. Norbornene carboxylic acid , pentafluorophenol, and dicyclohexanecarbodiimide (coupling reagent)were dissolved in dichloromethane and reacted 24 hours to form the pentafluorophenol monomer. In dried schlenk flask under Nitrogen, added 2 ND generation catalyst (red). Added ~8mL of dry toluene. Stirred to dissolve. Added anhydrous pyridine to solution, which changed to dark green. Let stir for 15minutes, then add slowly and portion-wise to cold hexanes to precipitate out. Wash 3-4 more times with cold hexanes. Dry under vacuum for about an hour. 300mg of PFP monomer were dissolved in 2mL of dry DCM. Then 1mL (150mg) of the monomer solution was added. It took 15 minutes to polymerize, and there was a color change from bright green to pale brown. The reaction was terminated with 40 μ L of ethyl vinyl ether, then precipitated in ether and centrifuged for 20mins, forming a white pellet. 93mg of NHS monomer were dissolved in dry DCM, then 1mL of the solution was added to the stirring catalyst. After 15 minutes the reaction was terminated with 40 μ L of ethyl vinyl ether, then precipitated in ether and centrifuged for 20 minutes. 20mg of NHS polymer were dissolved in 2mL of dry DMF, then half of the solution was put in a separate flask. 6mg (0.78eq.) of biphenyl amine were dissolved in 0.5mL of dry DMF and added to the NHS solution. 12mg (1.56 eq.) of biphenyl amine were then dissolved in 1mL of dry DMF and added to the other NHS solution. The same procedure was followed for pyrene conjugation to the NHS polymer. The above are SLS traces of amine conjugation to the NHS polymers. In all cases, a peak shift shows a quantitative conjugation of the amine to the polymer. However exact molecular weights of the polymers could not be determined, so quantitative analysis could not be performed. Pure polymers were difficult to isolate, so efficiency of conjugation could not be confidently determined. The purpose of synthesizing terminating agents is to allow amines to be conjugated on different locations of the polymers as seen above. The NHS and PFP esters are on the ends of the functionalized polymers. Using Light Scattering Data from the Original NHS Polymer, a comparison could be made to the conjugated polymer in order to understand the efficiency of the Biphenyl and Pyrene amines to conjugate on to the NHS polymer. LS data provides insight about the molecular weight of the polymer and its polydispersity by the sample’s ability to absorb light, so the more dense conjugated polymer should produce a peak earlier than the less dense NHS Polymer. The NHS Polymer reaches its absolute max height of 1 AU at time 23.47 minutes, while the polymer with the conjugated biphenyl amine reaches its peak at 23. 41 minutes. Also, the molecular weight data shows a definite increase from the original NHS Polymer to the conjugated polymer. Knowing the amine conjugation efficiency and optimized conditions will allow us to apply that knowledge to more complex systems, such as conjugating peptides to polymers. -0.6 -0.4 -0.2 0 0.2 0.4 0.6 0.8 1 1.2 -5 0 5 10 15 20 25 30 35 40 Signal Inensity Concentration (minutes) NHS Polymer NHS polymer LS NHS polymer RI NHS polymer UV ε = 12,951 ε = 11,609

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Functionalized Polymers and Conjugation Efficiency Karla Mendoza, Clare LeGuyader, Nathan Gianneschi*

Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0378

PFP Monomer

NHS Polymer via ROMP PFP Polymer via ROMP

Synthesizing functionalized polymers has a variety of uses in the field of nanotechnology and biotechnology. The method consists of polymerizing specific monomers via ring-opening metathesis polymerization (ROMP). Grubb’s 3rd generation catalyst is a fast-initiating catalyst that has been found to be particularly effective for polymerization due to its ability to work with an array of functional groups. Pentafluorophenol (PFP) is useful in peptide synthesis, soluble in many organic solvents; meanwhile N-Hydroxysuccinimide (NHS) is used as an activating agent for carboxylic acids. Once polymers are synthesized, dialysis may be performed to produce amphiphilic micelles of ranging morphologies and functions which may be useful in aiding biological functions. Also, the efficiency of the conjugation of amines on to the polymer is important for peptide synthesis and its effect in a living organism.

PFP Polymerization with Grubb’s 3rd Generation Catalyst

Future Directions

Conclusions

Grubb’s 3rd Generation Catalyst

Conjugation of Biphenyl and Pyrene Amines on NHS Polymer

y = 12951x + 0.0468 R² = 0.9986

0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

0 0.00002 0.00004 0.00006 0.00008 0.0001 0.00012

Abso

rban

ce (A

U)

Concentration (M)

Free Pyrene Absorbance Curve λ Max Abs= 335nm

Linear (Pyrene 335nm)

Introduction

y = 11609x + 0.0549 R² = 0.9986

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0 0.00001 0.00002 0.00003 0.00004 0.00005 0.00006 0.00007

Abso

rban

ce (A

U)

Concentration (M)

Free Biphenyl Absorbance Curve λ Max Abs= 270nm

biphenyl

-1.5

-1

-0.5

0

0.5

1

1.5

-5 0 5 10 15 20 25 30 35 40

Sign

al In

tens

ity

Time (minutes)

A69A: Biphenyl, .78 eq.

A69A LS A69A UV A69A RI

-1.5

-1

-0.5

0

0.5

1

1.5

-5 0 5 10 15 20 25 30 35 40

Sign

al In

tens

ity

Time (minutes)

A69B: Biphenyl, 1.56 eq.

A69B LS A69B UV A69B RI

-1

-0.8

-0.6

-0.4

-0.2

0

0.2

0.4

0.6

0.8

1

1.2

-5 0 5 10 15 20 25 30 35 40

Sign

al In

tens

ity

Time (minutes)

A70A: Pyrene, 1 eq.

A70A LS A70A UV A70A RI

-1.5

-1

-0.5

0

0.5

1

1.5

-5 0 5 10 15 20 25 30 35 40

Sign

al In

tens

ity

Time (minutes)

A70B: Pyrene, 2eq.

A70B LS A70B UV A70B RI

An experiment was performed to produce an NHS Terminating Agent by reacting the NHS monomer in DCC and carboxylic acid in dry DMF under nitrogen. After an hour, promising results were yielded. There was a color

change from dark yellow to bright yellow.

To test the polymerization of the PFP monomer,, a time course NMR study was taken. At time t=0 only the monomer was present. The Grubb’s catalyst solution was added to the monomer solution causing a color change from bright green to brown, indicating polymerization. The monomer fully polymerized in 12 minutes.

Norbornene carboxylic acid , pentafluorophenol, and dicyclohexanecarbodiimide (coupling reagent)were

dissolved in dichloromethane and reacted 24 hours to form the pentafluorophenol monomer.

In dried schlenk flask under Nitrogen, added 2ND generation catalyst (red). Added ~8mL of dry toluene. Stirred to dissolve. Added anhydrous pyridine to solution, which changed to dark

green. Let stir for 15minutes, then add slowly and portion-wise to cold hexanes to precipitate out. Wash 3-4 more times with cold

hexanes. Dry under vacuum for about an hour.

300mg of PFP monomer were dissolved in 2mL of dry DCM. Then 1mL (150mg) of the monomer solution was added. It took 15 minutes to polymerize, and there was a color change from

bright green to pale brown. The reaction was terminated with 40 μ L of ethyl vinyl ether, then precipitated in ether and

centrifuged for 20mins, forming a white pellet.

93mg of NHS monomer were dissolved in dry DCM, then 1mL of the solution was added to the stirring catalyst. After 15 minutes the reaction was

terminated with 40 μ L of ethyl vinyl ether, then precipitated in ether and centrifuged for 20 minutes.

20mg of NHS polymer were dissolved in 2mL of dry DMF, then half of the solution was put in a separate flask. 6mg (0.78eq.) of biphenyl amine were dissolved in 0.5mL of dry DMF and added to the NHS solution. 12mg (1.56 eq.) of biphenyl amine were then dissolved in 1mL of dry DMF and added to the other NHS solution. The same procedure was followed for pyrene conjugation to the NHS polymer.

The above are SLS traces of amine conjugation to the NHS polymers. In all cases, a peak shift shows a quantitative conjugation of the amine to the polymer. However exact molecular

weights of the polymers could not be determined, so quantitative analysis could not be performed. Pure polymers were difficult to isolate, so efficiency of conjugation could not be

confidently determined.

The purpose of synthesizing terminating agents is to allow amines to be conjugated on different locations of the polymers as seen above. The NHS and PFP esters are on the ends of the functionalized polymers.

Using Light Scattering Data from the Original NHS Polymer, a comparison could be made to the conjugated polymer in order to understand the efficiency of the Biphenyl and Pyrene amines to conjugate on to the NHS polymer. LS data provides insight about the molecular weight of the polymer and its polydispersity by the sample’s ability to absorb light, so the more dense conjugated polymer should produce a peak earlier than the less dense NHS Polymer. The NHS Polymer reaches its absolute max height of 1 AU at time 23.47 minutes, while the polymer with the conjugated biphenyl amine reaches its peak at 23. 41 minutes. Also, the molecular weight data shows a definite increase from the original NHS Polymer to the conjugated polymer. Knowing the amine conjugation efficiency and optimized conditions will allow us to apply that knowledge to more complex systems, such as conjugating peptides to polymers.

-0.6

-0.4

-0.2

0

0.2

0.4

0.6

0.8

1

1.2

-5 0 5 10 15 20 25 30 35 40

Sign

al In

ensi

ty

Concentration (minutes)

NHS Polymer

NHS polymer LS NHS polymer RI NHS polymer UV

ε = 12,951 ε = 11,609