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Exploring the Relationship between Motor and Frontoparietal Brain Networks in Upper Limb Motor Outcome Post-Stroke by Timothy Ka-Hung Lam A thesis submitted in conformity with the requirements for the degree of Master of Science Rehabilitation Sciences Institute University of Toronto © Copyright by Timothy Lam 2016

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Page 1: Exploring the Relationship between Motor and ... · Exploring the Relationship between Motor and Frontoparietal Brain ... FMRIB Oxford Centre for Functional MRI of the Brain FNIRT

Exploring the Relationship between Motor and Frontoparietal Brain Networks in Upper Limb Motor

Outcome Post-Stroke

by

Timothy Ka-Hung Lam

A thesis submitted in conformity with the requirements for the degree of Master of Science

Rehabilitation Sciences Institute University of Toronto

© Copyright by Timothy Lam 2016

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Exploring the Relationship between Motor and Frontoparietal Brain

Networks in Upper Limb Motor Outcome Post-Stroke

Timothy Lam

Master of Science

Rehabilitation Sciences Institute

University of Toronto

2016

Abstract

Background: A network-approach may help understand how extensive neural changes arise

from localized damage. Given that motor and frontoparietal networks are implicated in motor

learning, these networks may also be implicated in motor re-learning post-stroke. This thesis

studies the relationship between motor and frontoparietal networks and movement post-stroke.

Methods: Twenty-seven chronic stroke participants underwent behavioural assessments and

magnetic resonance imaging. The resting state connectivity (rs-connectivity) within (intra-

network) and between (inter-network) motor and frontoparietal networks were correlated with

behavioural scores.

Results: Intra-network: i) Participants with higher rs-connectivity between the primary motor

cortex and supplementary motor area have less hand impairment and greater motor function; ii)

Participants with higher rs-connectivity between the dorsolateral prefrontal cortex and mid-

ventrolateral prefrontal cortex have less hand impairment. Inter-network: participants with higher

rs-connectivity between the motor and frontoparietal networks have greater motor function.

Conclusion: Connectivity of motor and frontoparietal networks may be a biomarker of

movement post-stroke.

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Acknowledgments

The seven-day work week, caffeine dependence, and stipend money paid in three equal

installments are all aspects that come with the territory of graduate school. Although these may

not be the most glamorous features of being a student, one cannot overlook the intangibles of

graduate training. Being given the opportunity to carry out a thesis project is a test of one’s

responsibility, critical thinking skills, and dedication. In addition to personal development, an

equally important aspect of graduate training is the recognition that research involves the

contributions from many people. Over the course of my graduate training, I have been fortunate

to meet and work with many individuals, and hope to maintain the relationships I have

established with these individuals for years to come. Although only one name is listed on the

first page of this thesis, this project has truly been a collective effort.

First and foremost, I would like to thank my supervisor, Dr. Joyce Chen, for giving me

the opportunity to complete my Master’s thesis under her mentorship. Joyce has been a source of

encouragement, guidance, and wisdom from the very beginning. One cannot possibly calculate

the amount of time and effort she has invested into training me. I simply hope that some of the

knowledge she has passed on to me will stay with me for many years to come.

I would also like to thank my program advisory committee, led by my co-supervisor, Dr.

Deirdre Dawson. Deirdre has been influential in ensuring that I always think about the relevance

of my project in a larger context. Dr. Jean Chen has been helpful in addressing any questions I

had about neuroimaging methods. And, Dr. Brian Levine has been instrumental in offering

valuable advice to improve this project.

In addition, I would like to thank Dr. Takako Fujioka and Deirdre for letting me use a

portion of their dataset for my thesis project. I am grateful for the opportunity to use this dataset

which also led me to meet and work with many great individuals. Most notably, I would like to

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thank Dr. Kie Honjo for her work in tracing the lesions for all the participants in the study. I also

appreciate Dr. Malcolm Binns for taking his time to discuss the appropriate statistics for my

project. In addition, I had the privilege to meet Dr. Donald Stuss, who kindly shared with me

some of his expertise on executive function. I am also fortunate to have met Rebecca Wright and

Adora Chiu. Both Rebecca and Adora always went the extra step to find or direct me to the

answers I requested about the study protocol. Finally, I would also like to acknowledge all of the

students who helped with data collection for the study.

In addition, I would like to thank my lab members and colleagues – Dr. Shinya Fujii,

Stephanie Cheung, Ashley Schipani, and Anuj Rastogi – for their support and advice over the

course of this thesis.

Lastly, I would like to thank my parents and two sisters (Karen and Doris) for their

endless support. Although my parents were not directly involved in this project, I am grateful for

their help in taking care of everything outside the lab, so I could devote as much time and effort

towards my research.

Although the journey beyond this thesis is still unknown to me, I am thankful for the

individuals I have met, the knowledge I have gained, and the paths I have taken over the course

of my graduate training.

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Table of Contents

Table of Contents

Acknowledgments.......................................................................................................................... iii

Table of Contents .............................................................................................................................v

List of Tables ................................................................................................................................ vii

List of Figures .............................................................................................................................. viii

List of Appendices ......................................................................................................................... ix

List of Abbreviations .......................................................................................................................x

Chapter 1 Introduction .....................................................................................................................1

Chapter 2 Background .....................................................................................................................4

1 Stroke: An overview of the epidemiology, pathophysiology, and recovery ...............................4

1.1 Brief history and epidemiology ...........................................................................................4

1.2 Pathophysiology ...................................................................................................................5

1.3 Symptoms and treatment ......................................................................................................6

1.4 Neurological recovery ..........................................................................................................6

2 Rehabilitation ..............................................................................................................................8

2.1 Definitions............................................................................................................................8

2.2 Upper limb motor deficits ..................................................................................................10

2.3 Movement in healthy individuals .......................................................................................10

2.3.1 Movement in individuals with stroke ....................................................................13

2.4 Frontoparietal network .......................................................................................................17

2.4.1 Frontoparietal network implicated in cognition .....................................................17

3 Neuroimaging ............................................................................................................................25

3.1 Relevance for stroke severity and rehabilitation ................................................................25

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3.2 Fundamental physics of magnetic resonance imaging .......................................................27

3.3 Functional magnetic resonance imaging ............................................................................29

3.4 Resting state functional magnetic resonance imaging .......................................................30

4 Summary ...................................................................................................................................34

Chapter 3 Objectives and Hypotheses ...........................................................................................34

Objectives ..................................................................................................................................34 1

2 Hypotheses ................................................................................................................................34

Chapter 4 Manuscript .....................................................................................................................35

Chapter 5 Discussion .....................................................................................................................54

1 Review of study findings ..........................................................................................................54

2 Inter-network connectivity ........................................................................................................55

2.1 Inter-network connectivity between motor and frontoparietal networks ...........................55

2.2 Potential confounds ............................................................................................................61

2.3 Anomalous cases ................................................................................................................62

3 Intra-network connectivity ........................................................................................................64

3.1 Frontoparietal network .......................................................................................................65

3.2 Motor network ...................................................................................................................67

4 Study strengths and limitations .................................................................................................68

4.1 Strengths ............................................................................................................................68

4.2 Limitations .........................................................................................................................70

5 Study implications .....................................................................................................................76

6 Future directions .......................................................................................................................77

Chapter 6 Conclusion .....................................................................................................................77

References ......................................................................................................................................78

Appendices ...................................................................................................................................107

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List of Tables

Table 4-1: Participant demographics and performance on clinical assessments……………......46

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List of Figures

Figure 2-1: Trajectory of recovery……………………………………………………………......7

Figure 2-2: International Classification of Functioning, Disability, and Health…………………9

Figure 2-3: Model of motor control…………………………………………………………......12

Figure 2-4: Trail Making Test performance……………………………………………….........20

Figure 2-5: Motor hierarchy model…………………………………………………………......21

Figure 2-6: Motor learning model…………………………………………………………........22

Figure 2-7: Physics of Magnetic Resonance Imaging…………………………………………..28

Figure 2-8: Resting state network templates……………………………………………………32

Figure 4-1: Seed masks for the resting state networks……………………………………….....42

Figure 4-2: Lesion masks of stroke participants in study……………………………………….47

Figure 4-3: Intra-network connectivity results………………………………………………….47

Figure 4-4: Inter-network connectivity results………………………………….……………....48

Figure 5-1: Inter-network connectivity results (non-significant) …………….………………...60

Figure 5-2: Motor-FP connectivity with ARAT (accounting for individual covariates)………..62

Figure 5-3: Motor-FP connectivity with ARAT (accounting for inter-network connectivity)….62

Figure 5-4: Anomalous cases for inter-network connectivity correlation…………….………...63

Figure 5-5: Trail Making Test proportion score distribution and lesion location summary…….71

Figure 5-6: Task-switching paradigm measuring the switch cost between successive trials…...73

Figure 5-7: Stem and leaf plots of motor assessment scores…………….……………………...75

Figure 5-8: Intra-network connectivity results (non-significant) …………….………………...75

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List of Appendices

Appendix 7-1: Peak Coordinates Averaged for Left Primary Motor Cortex (M1) Seed Based on

Studies with an Arm/Elbow or Hand/Finger Paradigm….……………………….……………107

Appendix 7-2: Peak Coordinates Averaged for Left DLPFC Seed Based on Studies with a Task-

switching Paradigm…………………………………………………………………………….109

Appendix 7-3: Peak Coordinates Averaged for Left Primary Visual Cortex (V1) Seed Based on

Studies with a Flashing Checkerboard Paradigm………………………………………………110

Appendix 7-4: Peak Coordinates Averaged for Left Dorsal Anterior Cingulate Cortex (dorsal

ACC) Seed Based on Studies with a Stroop Task.……………………….…………………….111

Appendix 7-5: Statistical equations…………………………………………………………....112

Appendix 7-6: Data table………………………………………………………………………113

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List of Abbreviations

ACC Anterior cingulate cortex

AFNI Analysis of Functional NeuroImages

ARAT Action Research Arm Test

B0 External magnetic field

BA Brodmann Area

BET Brain Extraction Tool

BOLD Blood oxygen level-dependent 12C Carbon

CBF Cerebral blood flow

CMSA Chedoke-McMaster Stroke Assessment

CMSA-Arm Chedoke-McMaster Stroke Assessment: Stage of Arm Impairment

CMSA-Hand Chedoke-McMaster Stroke Assessment: Stage of Hand Impairment

CO-OP Cognitive Orientation to Daily Occupational Performance

CSF Cerebrospinal fluid

CST Corticospinal tract

dACC Dorsal anterior cingulate cortex

deoxyHb Deoxygenated hemoglobin

D-KEFS Delis-Kaplan Executive Function System

DLPFC Dorsolateral prefrontal cortex

FAST FMRIB Automated Segmentation Tool

FEAT FMRI Expert Analysis Tool

FLIRT FMRIB’s Linear Image Registration Tool

FMRI Functional magnetic resonance imaging

FMRIB Oxford Centre for Functional MRI of the Brain

FNIRT FMRIB’s Non-Linear Image Registration Tool

FP network Frontoparietal network

FSL FMRIB Software Library

Exec network Executive control network

GLM General Linear Model 1H Hydrogen

ICA Independent component analysis

ICF International Classification of Functioning, Disability, and Health

Intra-network connectivity Resting state connectivity within a network

Inter-network connectivity Resting state connectivity between two networks

M1 Primary motor cortex

MCFLIRT Motion Correction FMRIB’s Linear Image Registration Tool

mid-VLPFC mid-ventrolateral prefrontal cortex

MNI Montreal Neurological Institute

Motor-Exec connectivity Inter-network connectivity between the motor and executive control networks

Motor-FP connectivity Inter-network connectivity between the motor and frontoparietal networks

Motor-Visual connectivity Inter-network connectivity between the motor and visual networks

MRI Magnetic resonance imaging

oxyHb Oxygenated hemoglobin

PFC Prefrontal cortex

RETROICOR Retrospective image correction of physiologic motion effects in fMRI

RF Radiofrequency

Rs-fMRI Resting state functional magnetic resonance imaging

Rs-connectivity Resting state connectivity

RSN Resting state network

rTMS Repetitive transcranial magnetic stimulation

SAS Supervisory Attentional System

SMA Supplementary motor area

tDCS Transcranial direct-current stimulation

TMT Trail Making Test

TMT-2 Trail Making Test (condition #2: number sequencing)

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TMT-4 Trail Making Test (condition #4: number-letter switching)

TMT-ps Trail Making Test proportion score

tPA Tissue plasminogen activator

V1 Primary visual cortex

VLPFC Ventrolateral prefrontal cortex

WHO World Health Organization

WM White matter

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Chapter 1 Introduction

The human brain is highly inter-connected. With approximately eighty-six billion neurons

comprising the human brain, these neurons develop multiple connections (i.e., synapses) that

enable the communication with other neurons both nearby and remote from its origin

(Herculano-Houzel, 2009). As a result, it has been estimated that 0.15 quadrillion synaptic

connections in the cortex alone may be present in the human brain (Pakkenberg et al., 2003).

These numbers are not only impressive, but it suggests that the brain is also immensely complex.

The complexity and inter-connectedness of the brain is not only limited to the cellular level, but

is also found at the neural level (Sporns, 2011). A simple movement, such as reaching or

grasping, involves the communication between many brain regions (both motor and non-motor)

to successfully perform a task (Johansen-Berg & Matthews 2002; Braver, Reynolds, &

Donaldson, 2003). Taken together, the inter-connectedness of the human brain contributes to the

ability for individuals to successfully perform various actions in their environment.

The inter-connectedness of the brain is also demonstrated in individuals with stroke. Diaschisis is

a phenomenon in which focal damage to the brain can lead to widespread changes in regions

nearby and remote from the lesion, due to loss of connections with the injured area (Feeney &

Baron, 1986). Damage to the motor system can lead to changes in motor regions (e.g., primary

motor cortex (M1)) and non-motor regions (e.g., dorsolateral prefrontal cortex (DLPFC)) (Ward,

Brown, Thompson, & Frackowiak, 2003). To better understand the role of diaschisis in stroke

outcome, we can view the brain comprising distinct, yet inter-connected, networks. The use of

networks may help to explain some of the complexity in neural organization and may potentially

identify regions remote from the lesion that may influence motor outcome (Sporns, 2011).

A network-perspective of the brain has been applied to aspects of movement, such as learning a

novel motor sequence. In addition to the motor network (which includes brain regions such as

the M1, supplementary motor area, and premotor cortex (Biswal, Yetkin, Haughton, & Hyde,

1995)), a frontoparietal (FP) network (which includes regions such as the DLPFC, intraparietal

sulcus, and inferior parietal cortex (Dosenbach et al., 2007)), is thought to be involved in the

motor learning process (Hikosaka, Nakamura, Sakai, & Nakahara, 2002; Albert, Robertson, &

Miall, 2009; Kim, Ogawa, Lv, Schweighofer, & Imamizu, 2015). Although the FP network is

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more commonly associated with cognitive processes, such as task-switching performance

(Seeley et al., 2007; Li et al., 2015), the FP network is hypothesized to be involved in motor

learning by integrating visuospatial information about objects in the environment to help prepare

the proper movements (Hikosaka et al., 2002; Albert et al., 2009; Kim et al., 2015). Furthermore,

previous research has found that individuals with motor deficits post-stroke also show deficits in

task-switching performance (McDowd, Filion, Pohl, Richards, & Stiers, 2003; Pohl et al., 2007;

Serrien, Ivry, & Swinnen, 2007). This suggests that functions associated with the motor and FP

networks may not be as dissociable as how we traditionally view and study these regions and

networks. Given that motor recovery essentially requires stroke survivors to re-learn movements

(Krakauer, 2006), the integrity of the motor and FP networks may be similarly implicated in

motor outcome (and potentially task-switching) after stroke.

Motor and FP regions (such as the M1, premotor cortex, DLPFC, and parietal cortex) have been

found to be recruited during upper limb movement after stroke, however, it is unclear whether

the involvement of these motor and FP brain regions is associated with better (Weiller, Chollet,

Friston, Wise, & Frackowiak, 1992; Puh, Vovk, Sevsek, & Suput, 2007; Park et al., 2011;

Stewart, Dewanjee, Shariff, & Cramer, 2016) or worse (Ward et al., 2003; Dennis et al., 2011;

Yin et al., 2012) motor outcome. Only two studies (Park et al., 2011; Yin et al., 2012) to date

have examined the connectivity between motor and FP brain regions (specifically the M1 and

DLPFC) and its relationship with motor outcome. However, the findings from both studies are

also discrepant with each other. Specifically, Park and colleagues (2011) suggest higher

connectivity between the M1 and DLPFC is associated with better motor outcome. However,

Yin and colleagues (2012) report an opposite relationship – that is, higher connectivity between

the M1 and DLPFC is associated with worse motor outcome. Furthermore, both studies only

focus on the connectivity between specific brain regions, as opposed to the connectivity between

specific brain networks (i.e., connectivity between the entire motor and FP networks). This is an

important distinction as entire neural networks have been found to be altered after stroke (Wang

et al., 2014). A study of whether the entire motor and FP networks is related to motor outcome

may help in our understanding of the extensive neural changes to the motor network and the

relationship of the motor network with other neural networks that may be important for

movement, such as the FP network.

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Thus, the aim of my thesis is to use a holistic approach by examining the motor and FP networks

in relation to upper limb motor outcome and task-switching performance in stroke survivors. In

particular, I use resting state functional magnetic resonance imaging (rs-fMRI) to explore this

relationship. Rs-fMRI is a technique that allows us to examine the degree to which neural

activity – specifically, the blood oxygen level-dependent (BOLD) signal – is temporally

correlated or “connected” at rest (Biswal et al., 1995). Therefore, brain regions that are

connected with each other form a network. Importantly, the connectivity within an individual

network (intra-network connectivity) and between two different networks (inter-network

connectivity) is often influenced by pathology, such as stroke (Wang et al., 2014).

The objectives for my thesis are: 1) to determine the relationship between intra-network

connectivity of the motor network with motor and task-switching performance; 2) to determine

the relationship between intra-network connectivity of the FP network with motor and task-

switching performance; and 3) to explore the inter-network connectivity between the motor and

FP networks with motor and task switching performance.

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Chapter 2 Background

The aim of this chapter is to review the pertinent literature for my thesis project. As outlined in

the table of contents, the relevant literature has been broken down into three major sections. I

will first review our current understanding of stroke. Next, I will review the literature on

movement along with the importance of the frontoparietal (FP) network, in both healthy

individuals and those with stroke. Lastly, I will review some usages of brain imaging in a clinical

context and discuss the elementary physics that form the basis of magnetic resonance imaging

(MRI). Collectively, these three sections will help to build the rationale in studying the motor

and FP networks in relation to motor outcome following stroke.

1 Stroke: An overview of the epidemiology, pathophysiology, and recovery

In this section, I will review the epidemiology, pathophysiology, symptoms, and recovery of

stroke. This review will assist the reader in understanding the course of events prior to, during,

and after the stroke event.

1.1 Brief history and epidemiology

Hippocrates, the father of modern medicine (Grammaticos & Diamantis, 2008), was the first to

characterize stroke in patients who abruptly became ill (Pound, Bury, & Ebrahim, 1997).

Specifically, Hippocrates used the term ‘apoplexy’ (Sacco et al., 2013) which refers to the

sudden onset of disease just as if one was “struck by lightning” (Pound et al., 1997). Apoplexy

was perceived as a phenomenon until the mid-1600s when Jacob Wepfer discovered that

apoplexy was caused by massive bleeding or disruption to the blood supply in the brain (Pound

et al., 1997). It was not until 1962 when the Chest and Heart Association in London published a

document popularizing the term “stroke” which helped raise awareness across medical

professions from physicians to physiotherapists in taking a cooperative approach in stroke

treatment (Pound et al., 1997).

The World Health Organization (WHO) defines stroke as “rapidly developed clinical signs of

focal (or global) disturbance of cerebral function lasting more than 24 hours or leading to death,

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with no apparent cause other than of vascular origin” (Aho, Harmsen, Hatano, Marquardsen,

Smirnov, & Strasser, 1980). A recent publication by the American Heart Association expands

this definition of stroke to broadly include central nervous system infarction, ischemic stroke,

and intracerebral hemorrhage, among other subtypes (Sacco et al., 2013). Nonetheless, stroke is

highly prevalent worldwide with an estimate of 16 million first time strokes in 2005 (Kuklina et

al., 2012). In Canada, it is estimated that 50,000 individuals have a stroke (i.e., incidence) per

year (Hakim, Silver, & Hodgson, 1998). Furthermore, approximately 405,000 Canadians were

living with the effects of a stroke in 2013, with the prevalence expected to rise at least 62 percent

by the year 2038 (Krueger, Koot, Hall, O’Callaghan, Bayley, & Corbett, 2015). Although stroke

mortality has decreased over the past twenty years likely due to advances in health care (Feigin

et al., 2014), stroke remains a leading cause of lost productivity (as measured by disability

adjusted life years) (Kuklina et al., 2012).

1.2 Pathophysiology

The two major types of stroke are hemorrhagic and ischemic, with the latter making up 85

percent of the stroke cases (Hinkle & Guanci, 2007). Hemorrhagic stroke is caused by the

rupturing of blood vessels in the brain. As a result, the pooling blood causes damage by

compressing the surrounding brain tissue (Aronowski & Zhao, 2011).

Ischemic strokes can be caused by a thrombus (i.e., blood clot) that blocks blood flow in a

cerebral artery (Hinkle & Guanci, 2007). The thrombus is created from plaque formation on the

inner lining of the arterial wall (i.e., endothelium). Over time the plaque enlarges from

accumulation of cholesterol and platelets, among other components, circulating in the blood.

This is a condition known as atherosclerosis which is the hardening and narrowing of blood

vessels, and a precursor to ischemic stroke. Eventually, the thrombus is large enough to block

blood flow in the artery. Ischemic strokes can, alternatively, be caused by an embolus which

breaks off from a plaque and is carried through the bloodstream. Emboli are often from plaques

either from the heart or in the carotid artery of the neck. As the embolus circulates, it can be

wedged in cerebral vessels which then block blood supply. In both cases, the blockage of blood

flow leads to the deprivation of glucose and oxygen required for the brain tissue to function,

thereby causing stroke.

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1.3 Symptoms and treatment

Symptoms associated with stroke often depend on where the hemorrhage or ischemia is located

in the brain. However, the theory of diaschisis first suggested by von Monakow in the early

1900s states that areas remote from the damaged site can still be functionally affected due to loss

of connections between injured regions (Feeney & Baron, 1986). Therefore, a focal lesion can

lead to widespread changes in brain function and behaviour. Common symptoms of stroke

include: numbness or weakness on one side of the body, difficulty in speaking, blurred vision,

trouble coordinating movements, and balance problems (van der Worp & van Gijn, 2007).

Treatment for hemorrhagic stroke often requires surgical intervention to stop bleeding. For

ischemic strokes, the most common treatment involves the administration of tissue plasminogen

activator (tPA) which dissolves the thrombus or embolus to restore blood flow to brain regions

affected from the clot. In general, tPA is most effective if administered within three hours of

stroke symptom onset to improve neurologic outcome at three months (The National Institute of

Neurological Disorders and Stroke rt-PA Stroke Study Group, 1995). In the event that tPA is not

suitable for individuals who have a clot, endovascular treatment can be considered (Nogueira,

Schwamm, & Hirsch, 2009). Endovascular treatment involves the use of surgical devices to

remove the blood clot (Goyal et al., 2015) to restore blood flow in the vessel. Importantly,

endovascular treatment has been shown to be effective in treating individuals within six hours of

stroke onset, and functional outcome at three months has been found to be better than individuals

who were administered tPA (Badhiwala et al., 2015).

1.4 Neurological recovery

For the purposes of my thesis, “recovery” is defined as the improvement in ability – at the neural

and/or behavioural level – from the point of stroke onset (Murphy & Corbett, 2009). It is

important to acknowledge that others may define “recovery” as the full restoration of the same

abilities prior to stroke onset (Levin, Liebermann, Parmet, & Berman, 2009; Murphy & Corbett,

2009). Although this alternative definition is equally valid, “true” or “full” recovery – in the

strictest sense – is difficult to achieve, given that the stroke would have caused damage to brain

regions involved in highly specific behavioural abilities (Murphy & Corbett, 2009). Nonetheless,

both definitions are neither fully correct nor incorrect as it depends on the context/perspective

from which the definition is used. In general, the definition used for this thesis would likely

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apply to a clinical context whereas the definition others may use would likely apply to a

theoretical perspective (Murphy & Corbett, 2009).

Recovery from stroke can be classified into three stages which depend on time from stroke onset.

The acute stage is defined as within one week of stroke onset, the subacute stage is defined as the

time period between one week and six months of stroke onset, and the chronic stage is often

defined as more than six months since stroke onset (Miller et al., 2010; Billinger, Mattlage,

Ashenden, Lentz, Harter, & Rippee, 2012). In general, the trajectory of recovery often follows a

logarithmic pattern whereby rapid recovery occurs most prominently during the acute and

subacute stages (Skilbeck, Wade, Hewer, & Wood, 1983; Kotila Waltimo, Niemi, Laaksonen, &

Lempinen, 1984; Langhorne, Bernhardt, & Kwakkel, 2011) before reaching a plateau during the

chronic stage (Rasquin, Lodder, & Verhey, 2005; Langhorne et al., 2011; Buma, Kwakkel, &

Ramsey, 2013) (Figure 2-1). Nonetheless, there is evidence to suggest that recovery can still

occur during the chronic stage of stroke (Kotila et al., 1984; Murphy & Corbett, 2009; Teasell et

al., 2012).

Figure 2-1: Trajectory of recovery

A general (logarithmic) trajectory of recovery for an individual with stroke over the course of twelve months. Rapid

improvements for an individual are typically seen at the acute (< 1 week from stroke onset) and subacute (≥ 1 week

to ≤ 6 months) stages of stroke recovery, before plateauing at the chronic stage (> 6 months). Image ideas adapted

from Langhorne et al. (2011).

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Neurological recovery of stroke can be examined at various levels ranging from the molecular

and cellular levels (small-scale) to the neural (large-scale) level (Murphy & Corbett, 2009). Gene

and protein expression is typically increased to promote cell growth nearby the lesion (Murphy

& Corbett, 2009). Furthermore, the increased expression of growth-related genes and proteins

leads to the growth of new neurons, synapses, and dendritic spines (Murphy & Corbett, 2009).

On a larger scale, recovery can be achieved through the reduction in edema (Inoue et al., 1980),

reperfusion of brain regions with decreased blood flow (i.e., penumbra) (Muir, Buchan, von

Kummer, Rother, & Baron, 2006), resolution of diaschisis (Feeney & Baron, 1986), and

recruitment of perilesional areas (Chollet & Weiller, 1994; Rossini & Dal Forno 2004; Cramer &

Chopp, 2000). Collectively, these mechanisms occur mostly during the early stages of stroke

recovery, which can lead to spontaneous improvements observed in behavioural abilities from

the point of stroke onset. Over time neurological recovery can involve reorganization of neural

connections to recover behaviour (Nudo, 2013), which can be enhanced with rehabilitation.

2 Rehabilitation

In this section, I will review the literature on motor abilities in healthy individuals and stroke

survivors from studies that examine behaviour and/or neural patterns. This review will assist the

reader in understanding the aim of my thesis to study the motor and frontoparietal networks in

relation to motor outcome and task-switching ability after stroke.

2.1 Definitions

The terminology used in this thesis will be based on the definitions provided by the World

Health Organization (WHO). The WHO developed the International Classification of

Functioning, Disability, and Health (ICF) to provide a framework for health care professionals to

view the individual through a holistic lens (World Health Organization, 2002; Lexell &

Brogårdh, 2015) (Figure 2-2). Specifically, the ICF considers both the health condition and the

contextual factors (i.e., environmental and personal) that can influence the body part (i.e., body

function/structure), the individual (i.e., activity), and the individual within a social context (i.e.,

participation) (World Health Organization, 2002). In particular, the WHO defines “body

function” as “the physiological aspects of body systems” and “body structure” as “the anatomical

support” for the function, such as a limb or organ (World Health Organization, 2013). Pathology,

such as stroke, can lead to “impairment” which the WHO defines as “problems in body function

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or structure” (World Health Organization, 2002). Furthermore, “activity” is defined as “the

execution of a task or action” and individuals with stroke may have “activity limitations” which

the WHO defines as “difficulties an individual may have in executing activities” (World Health

Organization, 2002). Lastly, “participation” is defined as “the involvement in a life situation”

and an individual with stroke may experience “participation restrictions” which is defined as

“problems an individual may experience in involvement of life situations” (World Health

Organization, 2002). Taken together, the ICF views the deficit, the ability to perform tasks, and

the perceived involvement in life events equally important in the rehabilitation of stroke

survivors (World Health Organization, 2002; Lexell & Brogårdh, 2015).

Figure 2-2: International Classification of Functioning, Disability, and Health

A holistic perspective is taken to understand the individual. The health condition and the contextual factors (i.e.,

environmental and personal) can influence a specific body part (Body Function/Structure), the ability to perform

tasks (Activity), and the engagement in life situations (Participation) for an individual. Image adapted from the

World Health Organization (2002).

In this thesis, “rehabilitation” is defined as the intervention(s) that is/are used to optimize

recovery after stroke (Levin et al., 2009). In essence, “recovery” is the end-goal for an individual

and “rehabilitation” is the process that assists an individual towards their end-goal.

Rehabilitation can help to reduce impairment, activity limitations, and/or participation

restrictions. Specifically, rehabilitation that aims to reduce impairment attempts to restore the

structure and/or ability of the body part to the condition that was found before stroke onset.

Furthermore, rehabilitation that aims to reduce activity limitations is suggested to help the

individual with successful task completion. It is important to note that the primary concern in

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“activity” is the ability to complete the task, rather than the way in which an individual

completes the task. This may often lead to individuals who would use compensatory techniques.

Specifically, “compensation” is defined as the adaptation and/or substitution of the strategies an

individual normally used before stroke onset to complete a given task (Levin et al., 2009).

Lastly, rehabilitation that aims to reduce participation restrictions attempts to enhance the

involvement of the individual in life situations.

Taken together, one can argue that good spontaneous recovery and effective rehabilitation may

allow for an individual to express (at varying degrees) aspects of impairment reduction,

functional improvement, and participation enhancement (Kwakkel, Kollen, & Lindeman, 2004).

Together, these aspects of recovery can aim to improve the quality of life in individuals with

stroke by increasing their level of independence to perform daily tasks (Young & Forster, 2007;

Lexell & Brogårdh, 2015). Thus, effective rehabilitation after stroke likely requires the

healthcare team to consider addressing not only the physical deficit itself, but additional factors

that can potentially influence the recovery of the deficit.

2.2 Upper limb motor deficits

In this thesis, “motor deficits” are defined as the reduced ability for an individual to perform

voluntary (upper limb) movements (Sathian et al., 2011). Based on this definition, motor deficits

can also be referred to as “hemiparesis”. Specifically, hemiparesis is commonly experienced by

individuals with stroke (Krakauer, 2005) and is a syndrome that includes weakness, spasticity,

loss of fractionated movements, and deficits in motor planning (Sathian et al., 2011). It is

estimated that 85 percent of stroke survivors acquire hemiparesis as a result of stroke which

affects their quality of life (Levin et al., 2009). At six months after stroke onset, 30 to 66 percent

of stroke survivors still have no function in the paretic limb and only 5 to 20 percent make a full

functional recovery (Kwakkel, Kollen, van der Grond, & Prevo, 2003). Thus, more research is

warranted to better understand motor deficits after stroke and subsequent ways to enhance motor

recovery.

2.3 Movement in healthy individuals

The “motor system” is defined in this thesis as the behavioural and neural components of motor

ability that are implicated in movement. Numerous models have been developed to depict the

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organization of the motor system, based on the control (Wolpert & Kawato, 1998; Botvinick

2004; Haggard, 2008; Shadmehr & Krakauer, 2008; Cisek 2010; Mirabella 2014; Wong, Haith,

Krakauer, 2015) and/or learning (Hikosaka et al., 2002; Penhume & Steele, 2012) of movements.

Although the control and learning of movements can, at times, be thought of as complementary

processes, I will discuss each process separately in relation to the motor system. In this

subsection, I will review the literature on movement control in healthy individuals. The process

of learning movements will be discussed in subsection 2.4.1.2 (Motor learning).

In this thesis, “motor control” is defined as the ability for an individual to perform voluntary

movements (Shadmehr & Krakauer, 2008; Wong et al., 2015). Although various models for

motor control highlight different aspects of the motor system, it is evident that the control of

movements can be broken down into a few components or sub-processes (Wolpert & Kawato,

1998; Botvinick, 2004; Haggard, 2008; Shadmehr & Krakauer, 2008; Cisek & Kalaska, 2010;

Mirabella, 2014; Wong et al., 2015). In my thesis, I will focus on the model proposed by

Shadmehr and Krakauer (2008) since their model uses a more holistic approach to understand the

behavioural and neural components of the motor system. In addition to understanding how

people move (i.e., speed and coordination of movements) – which is often a common aspect of

many models for motor control – Shadmehr and Krakauer (2008) also address the motivation

that underlies why people even move in the first place.

Shadmehr and Krakauer (2008) propose a ‘cost-reward’ model of motor control whereby an

individual undergoes three sub-processes to perform movements [Figure 2-3]. Specifically,

individuals perform movements on the basis of maximizing the reward and minimizing the cost

of the outcome, as a consequence of moving. First, individuals predict the motor and sensory

costs and rewards in relation to the task in question. In particular, the basal ganglia (Jueptner &

Weiller, 1998; Groenewegen, 2003) are implicated in determining the costs and rewards.

Furthermore, the cerebellum helps to integrate this cost-reward information by developing a

model of the potential consequences or expectations as a result of moving (Ito, 2008; Stein,

2009).

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Figure 2-3: Model of motor control

A simplified model of motor control adapted from Shadmehr and Krakauer (2008). In essence, the brain regions and

their associated functions are the primary focus of the model depicted in this figure. First, an individual performs a

“Cost-Reward Calculation” when observing a stimulus, with the intention to minimize the costs and maximize the

rewards for moving. The basal ganglia and cerebellum are involved in this initial process. Next, an individual

undergoes a “Selection” process whereby the expected costs and rewards are integrated with sensory information to

determine the proper action that is required to interact with the stimulus. The parietal cortex is implicated in this

selection process. Lastly, an individual performs the “Optimization” process whereby movements are fine-tuned to

determine the best performance. The primary motor cortex, premotor cortex, and supplementary motor area are all

involved in this optimization process.

In the second sub-process, Shadmehr and Krakauer (2008) suggest individuals would

then integrate the expectations from their cost-reward model with the actual sensory information

they receive from the environment. This sub-process is intended to help the individual determine

how their body should interact with the environment to achieve the task. The parietal cortex

(Buneo & Andersen, 2006) helps to combine the predicted cost-reward model with the actual

sensory information. This enables the individual to develop an understanding of what

movements are required.

In the third sub-process, Shadmehr and Krakauer (2008) suggest that individuals fine-

tune their movements for optimal performance. The premotor cortex, supplementary motor area

(SMA) (Tanji & Shima, 1994; Gerloff, Corwell, Chen, Hallett, & Cohen, 1997; Shima & Tanji,

1998; Hoshi & Tanji, 2000; 2004; Davare, Andres, Cosnard, Thonnard, & Olivier, 2006; Pastor-

Bernier, Tremblay, & Cisek, 2012), and primary motor cortex (M1) (Penfield & Boldrey, 1937;

Graziano, 2006; Chouinard & Paus, 2006) are thought to plan and execute the appropriate

actions to perform the task. Furthermore, the corticospinal tract (CST) – the major motor output

pathway (Jang, 2014; Scott, 2004) – helps transmit the motor processing that occurs at the M1 to

the limbs for movement. As movements are performed, sensory information, as a consequence of

moving, is received by the individual to trigger the next round of cost-reward considerations and

movements. Collectively, Shadmehr and Krakauer (2008) suggest that motor control involves the

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coordination of many motor processes – and a “network” of brain regions – to execute

movements successfully.

2.3.1 Movement in individuals with stroke

Damage to the motor system (specifically, the corticospinal tract and/or cortical motor regions)

can lead to hemiparesis in stroke survivors, whereby these individuals are generally aware of the

actions they want to perform, but have difficulty executing the proper movements for a task

(Sathian et al., 2011). According to the motor control model proposed by Shadmehr and

Krakauer (2008), stroke survivors with hemiparesis are not efficient with their movements.

Specifically, individuals may have trouble initiating movements, show less accuracy in their

movements, and are generally slower while moving, when compared to healthy individuals

(Sathian et al., 2011; Levin, Liebermann, Parmet, & Berman, 2015). As a result, many stroke

survivors with severe motor deficits often use more compensatory movements to assist in task

performance (Subramanian, Yamanaka, Chilingaryan, & Levin, 2010; Levin et al., 2015). Trunk

displacement and shoulder flexion often occur in conjunction when a stroke survivor performs a

pointing task (Subramanian 2010; Sathian 2011; Levin et al., 2015). Although compensatory

movements can sometimes be effective, these techniques can sometimes be inefficient or

harmful to the individual (Sathian et al., 2011).

2.3.1.1 Motor assessments

To assess the severity of motor deficits in individuals with stroke, motor assessments can be

administered. Scores on motor assessments can help to monitor recovery over time, select

appropriate interventions, and set realistic goals for rehabilitation (Lang, Bland, Bailey, Schaefer,

& Birkenmeier, 2013). Based on the ICF, motor assessments can be divided into three major

categories corresponding to body function/structure, activity, and participation (Langhorne et al.,

2011). Motor assessments relating to body function/structure measure the level of impairment,

such as the Chedoke-McMaster Stroke Assessment (CMSA) Impairment Inventory (Langhorne

et al., 2011). These assessments focus on the “movement quality”, which is defined in this thesis

as the ability for an individual to perform movements in the same manner prior to stroke onset

(Levin et al., 2009). Motor assessments relating to activity measure the level of activity

limitations when performing everyday tasks, such as the Action Research Arm Test (ARAT)

(Langhorne et al., 2011). Although the ARAT measures the level of motor activity in individuals,

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it is important to note that studies (Lyle, 1981; van der Lee, De Groot, Beckerman, Wagenaar,

Lankhorst, & Bouter, 2001; Yozbatiran, Der-Yerghiaian, & Cramer, 2008) often refer to the

ARAT as measuring the level of “motor function”. To be consistent with the literature (and to

avoid potential misinterpretations whereby “motor activity” may refer to “motor (neural)

activity”), the ARAT will be referred in this thesis as an assessment for “motor function”.

“Motor function” is defined in this thesis as the ability for an individual to complete a motor task

(Levin et al., 2009). This should not be confused with the ICF terminology that relates “body

function” as a measure of “impairment”. The ICF appears to use “function” in the context of

‘normal’ physiological functioning (e.g., proper blood flow) of the body part (World Health

Organization, 2002), whereas the ARAT appears to use “function” in the context of task

completion involving the body part (Lyle, 1981; van der Lee et al., 2001; Yozbatiran et al.,

2008). Lastly, assessments relating to participation are often self-report measures that probe the

level of involvement in life situations, such as the Stroke Impact Scale (SIS) (Lang et al., 2013;

Langhorne et al., 2011).

For my thesis, I used motor assessments for impairment and function since both provide

fundamentally distinct, but complimentary information. In particular, a participant may exhibit

moderate motor impairment but have good motor function by using compensatory techniques

during task performance. I did not include a measure of participation for my thesis since I am

primarily interested in the neural patterns associated with the upper limb and its related abilities.

As a result, the study of participation in our stroke population is beyond the scope of this thesis,

given that participation involves many components beyond motor impairment and function (e.g.,

social factors, such as stigma and stereotypes, or environmental factors, such as the presence or

absence of accessibility devices) (World Health Organization, 2002).

I used the CMSA Impairment Inventory (to classify impairment) and ARAT (to measure

function) since both measures have good construct validity with other motor assessments, such

as the Fugl-Meyer assessment and Motricity Index, respectively (Gowland et al., 1993; Lyle,

1981; Hsieh, Hsueh, Chiang, & Lin, 1998; van der Lee et al., 2001; Yozbatiran et al., 2008). The

CMSA Impairment Inventory assesses the level of impairment in the arm, hand, shoulder,

posture, leg, and foot using a series of stages, which can help to classify which stage a stroke

survivor is at in their recovery. For the purposes of this thesis, however, I will only be using the

assessments from the CMSA Impairment Inventory for the arm and hand (which will be referred

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to in this thesis as CMSA-Arm and CMSA-Hand, respectively) since I am primarily interested in

the impairment of the upper limb post-stroke. The CMSA-Arm and CMSA-Hand are assessed on

seven stages, from flaccid paralysis (Stage 1) to normal movement (Stage 7) (Gowland et al.,

1993). Successful performance on the CMSA is dependent on the participant meeting certain

requirements characterized by “normal” movement. Importantly, the CMSA-Arm and CMSA-

Hand have high intra-rater and inter-rater reliability (Gowland et al., 1993). The ARAT assesses

four aspects of movement: 1) grasp (e.g., lifting a wooden block); 2) grip (e.g., displacing a tube

from one area to another); 3) pinch (e.g., picking up a ball bearing); and 4) gross movement (e.g.,

touch top of head with hand) (Lyle, 1981). Successful performance on the ARAT tasks is

dependent on meeting the cutoff times for each task (van der Lee et al., 2001; Yozbatiran et al.,

2008). Participants are permitted to use compensatory techniques to assist in task performance

since the primary objective is to complete the given task (Levin et al., 2009). The ARAT has

high intra-rater and inter-rater reliability on the entire assessment (van der Lee et al., 2001) and

on the individual subscales (Yozbatiran et al., 2008). Collectively, the CMSA and ARAT

provide valuable information of the motor behaviour in individuals. However, to better

understand the motor deficit, we can also study the structural damage in the brain and the

resulting functional effects.

2.3.1.2 Structural and functional damage to brain regions implicated in movement

Damage to one or multiple brain regions, including – but not limited to – the basal ganglia,

SMA, M1, and/or CST can lead to hemiparesis in individuals with stroke (Shadmehr &

Krakauer, 2008; Sathian et al., 2011). As suggested in the motor control model proposed by

Shadmehr and Krakauer (2008), damage to one or more of these regions implicated in motor

processing can lead to problems in the execution of movements. Together, these findings suggest

a relationship between structural brain damage and motor deficits. Despite this relationship, the

structural damage can also lead to changes in brain function (i.e., neural activity), which is

important to examine given that the motor deficit after stroke (according to the ICF) involves an

understanding of the impairments in both the body (i.e., brain) structure and function.

Analysis of neural activity while individuals perform movements can help to assess whether

motor recovery is typical or atypical. Generally, stroke survivors show greater neural activity in

the secondary motor areas (i.e., premotor cortex, SMA) when performing simple movements

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with one hand (Chollet, DiPiero, Wise, Brooks, Dolan, & Frackowiak, 1991; Cao 1998; Seitz,

Höflich, Binkofski, Tellmann, Herzog, & Freund, 1998; Calautti & Baron, 2003; Rehme,

Eickhoff, Rottschy, Fink, & Grefkes, 2012; Favre, Zeffiro, Detante, Krainik, Hommel, &

Jaillard, 2014). In the acute stage, individuals who elicit a pattern of neural activity different

from healthy individuals – that is, overactivity in the contralesional hemisphere (i.e., unaffected

hemisphere) – have better motor recovery when performing movements with the affected limb

(Marshall, Perera, Lazar, Krakauer, Constantine, & DeLaPaz, 2000; Feydy et al., 2002; Ward et

al., 2003; Rehme et al., 2012; Favre et al., 2014). In the chronic stage, however, individuals who

show a pattern of neural activity different from healthy individuals (i.e., greater neural activity in

contralesional hemisphere during movement) have worse motor recovery (Marshall et al, 2000;

Feydy et al., 2002; Ward et al., 2003; Rehme et al., 2012; Favre et al., 2014). Taken together, the

neural patterns elicited by stroke survivors allow us to not only understand how the brain

functions after injury, but it helps us recognize that similarities with healthy individuals may not

always be indicative of good recovery, since it depends on the stage of recovery.

2.3.1.3 Connectivity changes between brain regions implicated in movement

The temporal coupling of neural activity (i.e., connectivity) between brain regions implicated in

movement (e.g., M1, SMA, and premotor cortex) when an individual is not engaged in a task

(i.e., at rest) can also be used to assess motor recovery. Specifically, individuals with greater

connectivity between the left and right M1 have less motor impairment (Chen & Schlaug, 2013;

Park et al., 2011) and better motor function (Carter et al., 2010). Furthermore, increases in the

connectivity of these motor regions are associated with better recovery over time (Park et al.,

2011; Golestani, Tymchuk, Demchuk, Goodyear, & VISION-2 Study Group, 2013).

Collectively, these studies suggest that the temporal coupling of neural activity at rest between

motor regions – particularly the M1 – is also a sensitive measure to assess motor outcome.

In essence, both the behavioural and neural patterns that are observed in individuals with

hemiparesis provide complementary information that serve to better understand the motor deficit.

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2.4 Frontoparietal network

In this thesis, a “network” is defined as a group of brain regions that are highly inter-connected

with each other (Sporns, 2011). Olaf Sporns (2011), a pioneer in network neuroscience, states

that the formation and dependence of networks is found in a variety of fields, including social

science (e.g., social networks), ecology (e.g., food webs), and computers (e.g.,

telecommunications). Importantly, the use of network metrics to study the relationship between

two or more regions can help to explain complex phenomena in these areas, and suggests that

networks can potentially be applied to understand other complex fields, such as neuroscience. In

the context of the brain, Sporns argues that a single component (whether it is a cell or specific

brain region) is unable to perform complex processes, such as movement or cognition, since each

component may be limited by the number of functions it can perform. However, it is through the

communication between many components and the formation of networks that enable the

execution of complex processes.

The frontoparietal (FP) network comprise many brain regions in the frontal and parietal regions,

such as the dorsolateral prefrontal cortex (DLPFC), ventrolateral prefrontal cortex (VLPFC),

intraparietal sulcus, and inferior parietal cortex (Beckmann, DeLuca, Devlin, & Smith, 2005).

The FP network is thought to be implicated in various functions (Cole, Reynolds, Power,

Repovs, Anticevic, & Braver, 2013), including certain cognition processes (e.g., attention and

working memory) (Dosenbach et al., 2007; Seeley et al., 2007) and motor learning (Hikosaka et

al., 2002). The role of the FP network in these functions will be discussed in the following

sections.

2.4.1 Frontoparietal network implicated in cognition

The FP network is thought to be involved in various cognitive processes, such as attention

(Seeley et al., 2007; Ptak 2012), perception (Knapen, Brascamp, Pearson, van Ee, & Blake,

2011), language production (Geranmayeh, Wise, Mehta, & Leech, 2014; Zhu et al., 2014),

working memory (Linden, 2007; Seeley et al., 2007; Khader, Pachur, Weber, & Jost, 2016),

decision making (Braunlich, Gomez-Lavin, & Seger, 2015; Waskom, Frank, & Wagner, 2016),

and response inhibition (Rubia et al., 2001). Performance on these cognitive processes is

modulated by the neural activity in regions that are part of the FP network (He, Snyder, Vincent,

Epstein, Shulman, & Corbetta, 2007; Carter et al., 2010; Dacosta-Aguayo et al., 2014; Li et al.,

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2015). In particular, the DLPFC appears to be one region within the FP network that is

frequently reported as an area that mediates cognitive processes in both healthy individuals and

those with stroke (Dove et al., 2000; Rubia et al., 2001; Stuss, Bisschop, Alexander, Levine,

Katz, & Izukawa, 2001; Stuss & Levine, 2002; Moll et al., 2002; Zakzanis et al., 2005; Ravizza

& Carter, 2008; Knapen et al., 2011; Ptak, 2012; Hagen et al., 2014; Geranmayeh et al., 2014;

Kopp et al., 2015; Khader et al., 2016). The DLPFC is thought to be implicated in monitoring

performance by implementing the stimulus-response relationship (or ‘task rule’) and anticipating

future events (MacDonald, Cohen, Stenger, & Carter, 2000; Jamadar, Hughes, Fulham, Michie,

& Karayanidis, 2010). As a result, the DLPFC may be a critical region involved in the cognitive

processes associated with the FP network.

The FP network is both anatomically and functionally distinct from other brain networks

(Dosenbach et al., 2007; Seeley et al., 2007; Sridharan, Levitin, & Menon, 2008; Nomura et al.,

2010; Uddin, 2015). Although the FP network has been found to be involved in the same tasks as

the executive control (exec) network (which includes regions such as the anterior cingulate

cortex (ACC) and paracingulate cortex (Beckmann et al., 2005; Smith et al., 2009)), the FP and

exec networks are involved in different aspects of task performance (Dosenbach et al., 2007;

Seeley et al., 2007; Sridharan et al., 2008). Specifically, the FP network shows the greatest

involvement at the beginning and end of a given task (Dosenbach et al., 2007). As a result, the

FP network is hypothesized to be involved in task initiation and integrating feedback about

current performance to alter future task performance (Dosenbach et al., 2007). In contrast, the

exec network shows stable involvement over the course of the entire task which is hypothesized

to be involved in maintaining the goals and instructions for the current task (Dosenbach et al.,

2007). Taken together, the FP network is only one of many networks that may be involved in

task performance. Nonetheless, the FP network may play a critical role in integrating information

over time to improve subsequent task performance.

2.4.1.1 Task-switching

As discussed in the previous subsection, the FP network is implicated in various cognitive

functions. In addition to the aforementioned cognitive processes, many studies have found that

the FP network is involved in the process of task-switching (Dove et al., 2000; Sohn, Ursu,

Anderson, Stenger, & Carter, 2000; Dreher, Koechlin, Ali, & Grafman, 2002; Braver et al.,

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2003; Elliot, 2003; Wylie, Javitt, & Foxe, 2004; Ruge, Brass, Koch, Rubin, Meiran, & von

Cramon, 2005; Wager, Jonides, Smith, & Nichols, 2005; Yeung, Nystrom, Aronson, & Cohen,

2006; Seeley et al., 2007; West, Langley, & Bailey, 2011; Li et al., 2015). In this thesis, I will

discuss in greater detail the process of task-switching, given that this is an important cognitive

process, especially when interacting in environments that are constantly changing (Ravizza &

Carter, 2008). Task-switching may also be related to movement after stroke, as previous research

found an association between individuals with motor deficits and task-switching performance

(McDowd et al., 2003; Pohl et al., 2007; Serrien et al., 2007).

“Task-switching” is defined as the ability to juggle between two or more tasks in succession

(Rubinstein, Meyer, & Evans, 2001). In task-switching, each task is given equal priority since a

response is made for the current task before switching to a successive task (Rubenstein et al.,

2001). Thus, each task does not temporally overlap. Task-switching involves many cognitive

processes – including attention, working memory, and inhibition (Rubinstein et al., 2001;

Monsell, 2003). Specifically, attention is required to focus on the current task at hand, working

memory is required to maintain task rules and/or progress when a task is not being performed,

and inhibition is required to prevent the previous task from interfering with current task

performance (Rubinstein et al., 2001; Monsell, 2003).

To assess task-switching in clinical settings, an individual may complete an assessment that

measures task-switching, such as the Wisconsin Card Sorting Test (Anderson, Damasio, Jones,

& Tranel, 1991) or the Trail Making Test (TMT) (Delis, Kaplan, & Kramer, 2001). In my thesis,

I use the TMT to assess task-switching due to its high sensitivity to detect deficits in brain

function (Stuss et al., 2001; Sánchez-Cubillo et al., 2009).

The TMT is included in the Delis-Kaplan Executive Function System (D-KEFS) assessment

battery (Delis et al., 2001). The D-KEFS TMT comprises five conditions. For my thesis,

however, I only used the TMT condition #2 (TMT-2) and TMT condition #4 (TMT-4) since

these two conditions are most analogous to the TMT version commonly used in other studies

(Stuss et al., 2001; Tombaugh, 2004). Both TMT-2 and TMT-4 contain an array of letters and

numbers randomly placed on a page. In TMT-2, participants connect the numbers in increasing

order while ignoring the letters (e.g., 1-2-3) [Figure 2-4]. In TMT-4, participants connect the

number and letters in alternating fashion (e.g., 1-A-2-B-3-C). Completion time and number of

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errors are recorded. Age and education level of the individual can also influence TMT

performance (Tombaugh, 2004).

Figure 2-4: Trail Making Test Performance

(A) The Trail Making Test (TMT) condition #2 (Number Sequencing) requires the participant to connect the

numbers in increasing order while ignoring the letters. (B) The TMT condition #4 (Number-Letter Switching)

requires the participant to connect the numbers and letters in alternating fashion. Images ideas adapted from Delis et

al., (2001).

Although both conditions appear to be simplistic, many cognitive processes are required to

successfully perform the test (Gaudino, Geisler, & Squires, 1995; Crowe, 1998; Stuss et al.,

2001; Oosterman et al., 2010; Cepeda, Blackwell, & Munakata, 2013). Specifically, an

individual must search the visual array, read the stimuli on the page to comprehend as numbers

and letters, and move the pencil in their hand to connect the stimuli. Furthermore, an individual

requires working memory to hold their progress in memory for the previous number/letter as

they attend to the current number/letter. To account for some of these processes, the TMT

Proportion Score (TMT-ps) is often used to calculate task-switching performance on the TMT

since it takes into account the speed of an individual to scan the visual array and their movement

speed to connect the stimuli (Corrigan & Hinkeldey, 1987; Stuss et al., 2001) [Appendix 7-5].

Individuals with a lower TMT-ps value are suggested to have better task-switching performance.

Taken together, the ability for the TMT-ps to account for some of these processes enables us to

obtain a measure that is slightly more representative of task-switching performance.

2.4.1.2 Motor learning

The motor system in humans has long been viewed as a hierarchy. In the late 1800s, William

James (1890) suggested that movements can be characterized into two forms: low-level (i.e.,

reflexive actions) and high-level (i.e., voluntary movement). The ideas from James (1890) are

complementary to those of Hughlings Jackson (1889), who suggested that there are three levels

of motor centres that exist in the central nervous system of humans. Specifically, the spinal cord

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and cerebellum represent the lowest motor centre, the motor cortex is the intermediate motor

centre, and the prefrontal cortex (PFC) represents the highest motor centre. In essence, the

performance of more complex movements (Georgopoulos, 1991), such as learning a novel motor

sequence, would involve brain regions higher up on the motor hierarchy (e.g., PFC) relative to

less complex movements, such as reflexes, which may only involve regions that are lower on the

hierarchy (e.g., CST) [Figure 2-5]. Importantly, these hierarchies suggest that movement may

involve the communication between many brain regions (Wood & Grafman, 2003), including the

M1, premotor cortex, and at times the PFC, that play a collective role in the performance of

motor actions.

Figure 2-5: Motor hierarchy model

A motor hierarchy model adapted from Fuster (2001). Stimulus information from the environment will be

transmitted to the primary sensory cortex. This information will then be transferred to the unimodal association areas

(e.g., visual information to the primary visual cortex) and then to multimodal association areas (e.g., superior

parietal lobule) to develop a deeper meaning for the relevance of the stimulus. This information will then be

transmitted to the prefrontal cortex (PFC) to determine the appropriate actions to interact with the stimulus. Next,

the information will be transferred to the premotor cortex to plan the movements, and then to the primary motor

cortex to execute the action. When the action has been executed, the cycle will be repeated. Depending on the

complexity of the sensory or motor information, the information is not required to be transmitted to the multimodal

association areas and/or PFC. Complex actions, such as learning a finger tapping sequence, require the PFC to attach

relevance to these new movements and to store the movement patterns in memory.

The communication between motor and non-motor brain regions (e.g., PFC) is observed when

individuals learn movements, such as a complex finger tapping sequence. In this scenario, motor

and non-motor regions are required to learn, store, and develop associations (or meaning)

between movements that are otherwise random and disjointed. Initially, an individual learning a

movement sequence often has slow and inaccurate performance (Sakai, Ramnani, & Passingham,

2002; Penhume & Steele, 2012). However, individuals would quickly learn the proper

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movements and show large improvements in task performance (Hardwick, Rottschy, Miall, &

Eickhoff, 2013). According to Hikosaka and colleagues (2002) [Figure 2-6], the FP regions,

caudate, and cerebellar association areas are involved in this initial learning stage which requires

more conscious effort to control the spatial position or accuracy of movements. In particular, the

FP network is thought to facilitate in the integration of visuospatial information of objects in the

environment that can possibly be used to learn and plan the proper movements (Hikosaka et al.,

2002; Albert et al., 2009; Kim et al., 2015).

Figure 2-6: Motor learning model

A motor learning model adapted from Hikosaka and colleagues (2002). Sensory information enters the ‘associative’

loop (blue square). In particular, the sensory input will first be received by the frontoparietal cortex. Afterwards, this

information is subsequently relayed to the caudate (basal ganglia) and cerebellum for reward prediction and error

monitoring in motor performance, respectively. The associative loop is often implicated during the initial stages of

motor learning to quickly encode the spatial sequence of movements. When the sensory input has been processed by

the associative loop, this information is then given to the supplementary motor area and premotor cortex which then

relay this information to the ‘motor’ loop (red square). This information will first be given to the motor cortex

before sending this information to the putamen (basal ganglia) and cerebellum to determine the predicted events and

timing of movements, respectively. The motor loop is often implicated during the later stages of motor learning to

slowly encode the proper sequence of movements for long term retention. Nonetheless, the motor cortex will help to

produce the motor output for task performance.

Over time, an individual who has learned the motor sequence has efficient and accurate

performance, to the point that these movements can be performed under less conscious control

(Roberston 2004; Hotermans, Peigneux, Maertens de Noordhout, Moonen, & Maquet, 2006;

Penhume & Steele, 2012). According to Hikosaka and colleagues (2002), learning continues to

occur in these later stages, but primarily involves the motor cortex, putamen, and cerebellum

(Hardwick et al., 2013). These regions are thought to fine-tune performance, such as improving

the speed or force of movements. Thus, FP regions show less recruitment when a movement

sequence is learned relative to when an individual is initially learning a movement sequence

(Toni, Krams, Turner, & Passingham, 1998; Debaere, Wenderoth, Sunaert, Van Hecke, &

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Swinnen, 2004; Puttemans, Wenderoth, & Swinnen, 2005; Meister et al., 2005). Nonetheless, the

FP network appears to have an important role, especially in the early stages of motor learning, to

integrate visuospatial information which can be used to inform subsequent performance.

In the context of stroke, motor re-learning is important for motor recovery (Krakauer, 2006).

Simple movements, such as reaching or grasping, may be difficult for stroke survivors to

perform (Cirstea & Levin, 2000). Thus, stroke survivors often require movements to be re-

learned such that performance can eventually become more accurate, efficient and/or successful.

Rehabilitation interventions, such as constraint-induced movement therapy, robotic therapy, and

virtual reality, involve principles of motor learning that aim to enhance movement over time

through practice (Krakauer, 2006). Given the neural correlates implicated in motor learning

(Hikosaka et al, 2002; Penhume & Steele, 2012), the FP network, in addition to the motor

network (which includes regions such as the M1, SMA, and premotor cortex) (Beckmann et al.,

2005; Smith et al., 2009), may both be important in motor recovery after stroke.

2.4.1.3 Frontoparietal regions implicated in motor recovery

Movement, as reviewed in section 2.2 (Upper limb motor deficits) of this thesis, is often studied

as a process that works in isolation of other components (Serrien et al., 2007; Rosenbaum,

Chapman, Weigelt, Weiss, & van der Wel, 2012). However, studies on the motor hierarchy and

motor learning (as discussed in the previous subsection), suggest that movement (and motor

recovery) may involve motor and non-motor networks, such as the FP network.

There are certain motor and cognitive processes that appear to involve both the motor and FP

networks. For example, motor learning involves the motor network to plan and execute

movements (Bonzano, et al., 2015). However, frontoparietal regions – as discussed in the

previous subsection (Motor learning) – are also thought to be involved in motor learning,

perhaps with integrating visuospatial information to assist in proper movement selection

(Hikosaka et al., 2002; Albert et al., 2009; Kim et al., 2015). As discussed in section 2.4.1

(Frontoparietal network implicated in cognition) and subsection 2.4.1.1 (Task-switching),

cognitive processes, such as task-switching, involve the communication between frontoparietal

regions. However, the motor network may also be implicated in cognitive processes, such as

task-switching, given that motor regions are important in the execution of goal-directed actions

that arise from (internal) cognitive processing (Scott, 2003; Leisman, Moustafa, & Shafir, 2016).

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Taken together, both the motor and FP networks may be involved in additional functions that

these networks are not traditionally associated with. Thus, a study of the motor and FP networks

in relation to movement and task-switching in stroke survivors is warranted, given prior evidence

that suggests both networks may be implicated in certain processes together.

Despite studies demonstrating that motor and FP regions are associated with motor outcome after

stroke, it is not clear whether the involvement of motor and FP regions is related to better

(Weiller et al., 1992; Puh et al., 2007; Park et al., 2011; Stewart et al., 2016) or worse (Ward et

al., 2003; Dennis et al., 2011; Yin et al., 2012) motor outcome. In particular, only two studies to

date have examined the connectivity between motor and frontoparietal regions. Park and

colleagues (2011) found that individuals with higher connectivity between the M1 and DLPFC

have better motor outcome. Conversely, Yin and colleagues (2012) report the opposite; that is,

individuals with higher connectivity between M1 with DLPFC have worse motor outcome. The

ability to clarify whether higher M1-DLPFC connectivity is associated with better or worse

motor outcome may eventually be useful in devising interventions that either up-regulate or

down-regulate the neural activity of these regions. I anticipate that higher M1-DLPFC

connectivity is associated with better motor outcome, given that many studies have shown that

higher connectivity between motor (Carter et al., 2010; Chen & Schlaug, 2013; Golestani et al.

2013) or FP (Seeley et al., 2007; Dosenbach et al., 2007; Li et al., 2015) regions is related to

better performance in both healthy individuals and those with stroke. Nonetheless, further

research is necessary to elucidate the relationship between motor and FP brain regions in motor

outcome after stroke.

Lastly, a recurrent idea in this chapter has been the importance of examining brain networks that

are involved in movement. There is increasing evidence to study the brain using a network-

approach (Beckmann et al., 2005; Bullmore & Sporns, 2009; Sporns, 2011) rather than to focus

on a specific brain area since many regions are often implicated in a single motor process

(Fuster, 2001; Hikosaka et al., 2002; Shadmehr & Krakauer, 2008). Based on the theory of

diaschisis (Feeney & Baron, 1986), damage to the motor system can lead to widespread effects

both nearby and remote from the lesion. In the context of brain networks, damage to a motor

region can lead to changes in connectivity both within the motor network and potentially

between other networks (Wang et al., 2014). However, the two previous studies (Park 2011; Yin

2012) that examined the connectivity between M1 and DLPFC focus on specific brain regions,

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as opposed to entire motor and FP networks, associated with motor outcome after stroke. As a

result, it is important to explore whether changes involving the entire motor and FP networks are

also related to movement following stroke. This information can provide insight on the potential

effects a focal lesion may have on entire networks.

3 Neuroimaging

In this section, I will review the relevance of neuroimaging in stroke recovery and the physics

principles that contribute towards the formation of structural and functional brain images. I will

focus on magnetic resonance imaging (MRI) since MRI is used in my thesis to study the neural

basis of motor recovery after stroke. This review will assist the reader in understanding the

concepts that underlie the imaging and analysis techniques used in my thesis that involve resting

state functional MRI.

3.1 Relevance for stroke severity and rehabilitation

Clinical assessments are important for rehabilitation to assess the severity of deficits and to

monitor recovery over time in individuals with stroke. Although clinical assessments inform us

about behaviour, it is difficult to gain a good understanding of the neural events that underlie

behaviour. The structure and/or function of the brain as a result of stroke can, in part, help us to

understand why an individual produces certain behaviours that a clinician measures and/or

observes in the clinic. Therefore, we can use this information in determining whether certain

behaviours are typical during recovery or a cause for concern. Collectively, the use of

neuroimaging can be a valuable adjunct to clinical assessments in the understanding of specific

deficits observed in the clinic.

The information one gains from neuroimaging can, at times, be more sensitive than clinical

measures in assessing stroke severity (Burke & Cramer, 2013). For example, damage to the CST

– as discussed in section 2.3 (Movement in healthy individuals) – may lead to severe motor

deficits (Zhu, Lindenberg, Alexander, & Schlaug, 2010). The ability to determine the degree of

CST damage can be important when two individuals have different degrees of CST damage, yet

both present with the same scores on clinical assessments (see Figure 3 in Zhu et al., 2010 for

example). A measure of CST damage can help assess the degree of motor impairment and

predict the potential for an individual to regain their motor abilities. This is especially important

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during the acute and subacute stages when behaviour may not be as predictive of future ability

since the recovery trajectory is less stable (Pineiro et al., 2000; Burke et al., 2014; Feng et al.,

2015). In particular, the presence of edema (Inoue et al., 1980), reduced blood flow to the

penumbra (Muir et al., 2006), and diaschisis (Feeney & Baron, 1986), among other events that

occur during the acute and subacute stages of stroke recovery, can influence neural function such

that behaviour observed at these time points may not be fully representative of the actual (long-

term) impairment from the stroke (Lo, 1986; Nudo, Plautz, & Frost, 2001). Therefore, the use of

neuroimaging measures, such as CST damage, can help to provide more information on the state

of the deficit and recovery potential particularly for individuals with severe damage to the CST

(and perhaps those who exceed a certain threshold for CST damage that may indicate a ‘point of

no return’ for neural function) (Burke Quinlan et al., 2015; Feng et al., 2015). Taken together,

neuroimaging measures provide distinct, but complementary, information that can be used with

behavioural assessments to better understand aspects of the deficit and recovery.

In this thesis, a “biomarker” is a measure that provides information on the state of recovery in an

individual (Ward, 2015). Biomarkers are becoming increasingly important to assess recovery

over single or multiple time points (i.e., monitoring) (Ward, 2015). Furthermore, biomarkers are

used to determine the likelihood for an individual to recover (i.e., prediction) or show a

significant response to certain interventions for rehabilitation (i.e., treatment efficacy) (Stinear,

2010; Burke & Cramer, 2013; Zheng et al., 2016). In essence, biomarkers are useful since they

provide ‘clues’ on the current or future state of recovery, which clinicians can consider when

assessing the severity of the deficit and deciding on the course of rehabilitation for an individual.

In the context of neuroimaging, it is important that biomarkers for the structural and/or

functional integrity of the brain correlate with changes in behaviour, otherwise we cannot

appreciate its significance in the context of stroke recovery. The temporal coupling of neural

activity at rest is thought to be a useful biomarker for stroke recovery since it correlates with

behaviour after stroke, such as motor deficits (Chen & Schlaug, 2013; Carter et al., 2010; Park et

al., 2011) and cognitive performance (Carter et al., 2010; Dacosta-Aguayo et al., 2014).

Furthermore, changes in the temporal coupling of neural activity at rest, throughout the different

stages of recovery (Park et al., 2011) – and even as early as the first few hours of stroke onset

(Golestani et al., 2013) – can be used to predict recovery at later time points. This is especially

important for clinicians given that clinical decisions, such as treatment plans, are often required

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in the early stages of recovery. Previous research (Arsava 2012; Burke & Cramer, 2013; Burke

Quinlan et al., 2015; Rehme, Volz, Feis, Eickhoff, Fink, & Grefkes, 2015; Wu et al., 2015) has

shown that the use of neuroimaging biomarkers – including CST damage and temporal coupling

of neural activity – in conjunction with clinical assessments can better predict motor recovery

than the use of clinical assessments alone.

Lastly, neuroimaging can be used to study the neural correlates and/or mechanisms of recovery.

This information can be applied to the development of interventions that target specific brain

structures or processes to enhance recovery (Amadi, Ilie, Johansen-Berg, & Stagg, 2013; Ward,

2015). In particular, neural correlates thought to be important for recovery can be targets of brain

stimulation techniques. Brain stimulation applied to regions implicated in motor or cognitive

recovery (e.g., premotor cortex, DLPFC) can alter (or enhance) the neural activity of these

regions to possibly improve motor and cognitive performance, respectively, after stroke (Luber

& Lisanby 2014; Chen & Schlaug, 2016). In essence, neuroimaging offers important information

for stroke recovery, yet more research is necessary to further appreciate its relevance in clinical

settings.

3.2 Fundamental physics of magnetic resonance imaging

Magnetic resonance imaging (MRI) applies principles of nuclear magnetic resonance to exploit

the magnetic properties of subatomic particles found in the body. Subatomic particles, like

hydrogen (1H) or carbon (

12C), contain varying numbers of protons, neutrons, and electrons. In

particular, subatomic particles with an odd number of protons or neutrons, such as 1H, resemble

tiny bar magnets which exhibit the property of spin (Logothetis, 2002). A large majority of MRI

is done by exploiting the magnetic properties of hydrogen (i.e., a single proton) since it is highly

abundant in the body in the form of water (Plewes & Kucharczyk, 2012).

In the absence of an external magnetic field (B0), protons are randomly oriented. When an

external magnetic field (B0) is applied, a proportion of the protons will align in the direction of

the magnetic field (i.e., z-axis). In particular, only a small percentage of the total number of

protons in the body subjected to B0 align directly with the direction of the magnetic field. It is

estimated that only 1 in 100,000 protons align with B0 (at 1.5 Tesla) and thus contribute to the

NMR signal (Plewes & Kuckarczyk, 2012). Afterwards, a radiofrequency (RF) pulse is applied

to one slice of the brain to tip the protons in the transverse (x-y) plane (Logothetis, 2002). This

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causes the protons in the slice to be excited and no longer in alignment with each other.

Following excitation, the protons return from the transverse plane to the direction of the external

magnetic field. Protons will vary in their rate of return to the external magnetic field which

causes protons to release energy at different frequencies (or “signals”) detected by RF receiver

coils (Plewes & Kucharczyk, 2012). Importantly, the RF receiver coils detect the collective (or

overall) signal emitted by protons, which is then recorded as a single data point in a matrix,

referred to as “k-space” (Logothetis, 2002). This process is repeated multiple times to obtain data

points for one row of the k-space. Once a row is complete, the process is repeated by applying a

RF pulse to a subsequent slice of the brain such that data points can be recorded for the next row

of the k-space. This is repeated until the entire k-space is populated with data points. Figure 2-7

summarizes this process.

The information in k-space encodes the spatial information of these protons in the brain.

However, to view this information, the raw data in k-space is transformed to create a map of the

proton signals that resembles an image of the brain (Logothetis, 2002). Thus, different tissues

(e.g., grey matter and white matter) can be depicted in an MR image due to differing amounts of

water content – and hence, differing proton densities – between tissues (Plewes & Kucharczyk,

2012).

Figure 2-7: Physics of Magnetic Resonance Imaging

A simplified schematic of some fundamental steps to generate a magnetic resonance image are depicted. Black

arrows represent hydrogen atoms (i.e., protons) for a single brain slice. (A) Protons are randomly oriented in the

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absence of an external magnetic field. (B) Presence of an external magnetic field (B0) causes the protons to align in

the direction of B0. A radiofrequency (RF) pulse is then applied. (C) As a result of the RF pulse being applied, the

protons (originally in the z-axis) are tipped to the transverse (x-y) axis. This causes the protons to be excited. (D)

Protons are no longer in alignment with each other. Thus, protons will release energy at different frequencies as they

return to the z-axis. The different frequencies are picked up by a RF receiver coil which records the spatial

information of the protons in k-space. This process is repeated to obtain the rest of the data points in that row (or

“slice”) in k-space. Once a row has been complete, the process is repeated for the next brain slice. The data in k-

space is necessary to be transformed such that the proton signals resemble an image of the brain.

3.3 Functional magnetic resonance imaging

Functional magnetic resonance imaging (fMRI) is an imaging technique that indirectly measures

neural activity. Using the principles of MRI, protons will align in the direction of an external

magnetic field (B0). In fMRI, neural activity is indirectly measured based on changes in the

magnetic properties of blood. Specifically, hemoglobin in blood exhibits different magnetic

properties depending on whether it is oxygenated or deoxygenated (Ogawa, Lee, Kay, & Tank,

1990). When hemoglobin is oxygenated (oxyHb), it is weakly magnetic. Conversely, when

hemoglobin is deoxygenated (deoxyHb), it is highly magnetic. Importantly, the change in

concentrations between oxyHb and deoxyHb can distort the surrounding magnetic field. As a

result, the nearby proton spins become out of phase with each other (Brown, Perthen, Liu, &

Buxton, 2007).

When an individual is performing a task, the cerebral blood flow (CBF) increases to supply more

glucose (i.e., energy) to regions involved in task performance. The increase in CBF also changes

the relative concentrations of oxyHb to deoxyHb. In particular, regions involved in the task also

consume more oxygen. To accommodate the needs of these areas, the oxygen from oxyHb is

removed to supply these regions. Therefore, it is expected that an increase in deoxyHb

concentrations will follow and distort the proton signals in the blood and in tissues surrounding

the blood vessels, due to the strong magnetic properties exhibited by deoxyHb (Ogawa et al.,

1990). However, this hypothesis is not observed as individuals show an increase in oxyHb

concentration much greater than the deoxyHb concentration in regions involved in the task. It is

thought that this phenomenon results from the oxyHb level supplied by the CBF being much

greater than what is required by the brain regions involved in the task (Logothetis, 2002). Thus,

regions with higher concentration of oxyHb relative to deoxyHb will appear bright since there is

less deoxyHb (compared to baseline, prior to task performance) to distort the surrounding

magnetic field. This change in magnetic field (or “signal intensity”) is recorded as the blood

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oxygen level-dependent (BOLD) signal (Ogawa et al., 1990; Logothetis, 2002). In essence, the

BOLD signal is an indirect measure for neural activity since it involves changes in blood flow

that is thought to result from changes in neural activity when engaged in a task (Brown et al.,

2007).

3.4 Resting state functional magnetic resonance imaging

The brain consumes one-fifth of the body’s total energy while only at rest (i.e., when not

engaged in a task), yet energy consumption of the brain increases by less than five percent during

task performance (Fox & Raichle, 2007). Thus, it may also be of scientific relevance to study the

neural patterns when the brain is at rest since considerable energy demands are required even

when the brain is not engaged in a task. Resting state functional magnetic resonance imaging (rs-

fMRI) is a novel imaging modality that measures low frequency (0.1-0.01 Hz) BOLD signal

fluctuations at rest – that is, when individuals lie in the MRI scanner but do not engage in tasks

(Fox & Raichle, 2007). These spontaneous fluctuations are not noise but represent synchronized

BOLD signals.

In rs-fMRI, brain regions in anatomically distinct locations can exhibit synchronized BOLD

signals. Biswal and colleagues (1995) demonstrated the BOLD signal in the left motor cortex is

temporally correlated with the BOLD signal in the right motor cortex when participants were not

performing any task. Brain regions that are temporally correlated (or “connected”) – that is, they

exhibit similar BOLD signal time courses – form what are known as resting state networks

(RSNs). RSNs comprise brain regions that are involved in the processing of specific

tasks/abilities (Fox & Raichle, 2007). For the purposes of this thesis, the RSNs that I refer to are

based on the networks defined by the Oxford Centre for Functional MRI of the Brain (FMRIB)

group (Beckmann et al., 2005; Damoiseaux et al., 2006; Smith et al., 2009). For example, the

motor network is a RSN that includes the M1, premotor cortex, and SMA (Beckmann et al.,

2005) [Figure 2-8]. These brain regions comprising the motor network are the same brain

regions that process movement, such as finger tapping. Similarly, the frontoparietal (FP) network

is a RSN that includes the DLPFC, VLPFC, and inferior parietal cortex (Beckmann et al., 2005).

These brain regions comprising the FP network are the same brain regions involved in cognitive

processing, such as task-switching (Damoiseaux et al., 2006).

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The ability to study brain networks using current imaging modalities, such as rs-fMRI, has, in

part, enabled us to further understand the phenomenon of diaschisis (discussed in subsection 1.3

(Symptoms and treatment) (Carrera & Tononi, 2014). Diaschisis and neural networks are

distinct, yet related, concepts. A distinction between diaschisis and neural networks is the type of

neural changes (i.e., plasticity) that is represented by each concept. Specifically, diaschisis

primarily represents the plasticity as a result of brain damage (Carrera & Tononi, 2014). In

contrast, the connectivity of neural networks not only represents the plasticity as the result of

brain damage (Golestani et al., 2013), but may also represent plasticity as a result of transient

recovery (Park et al., 2011; Golestani et al., 2013), and/or the effect of rehabilitation (Fan et al.,

2015; Chen & Schlaug, 2016). Despite this distinction, diaschisis and brain networks are also

related since both concepts suggest the importance of neural connections and the consequences

that result from damage to these connections. Although the effect of diaschisis is most prominent

during the acute and subacute stages of stroke recovery, permanent changes in the neural activity

of remote areas in the brain can still be observed if diaschisis is not fully resolved by the chronic

stage (Feeney & Baron, 1986; Carrera & Tononi, 2014). Similarly, neural networks in chronic

stroke survivors still show differences in connectivity (often lower connectivity) relative to

healthy individuals (Park et al., 2011; Urbin, Hong, Lang, & Carter, 2014; Wang et al., 2014).

Taken together, the similarities and differences between the two concepts enable us to appreciate

that the study of neural networks has, in part, evolved from the initial concept of diaschisis.

Importantly, the same RSNs (e.g., motor, FP) can be delineated across different populations

(Beckmann et al., 2005; Damoiseaux et al., 2006; Fox & Raichle, 2007; Smith et al., 2009)

which suggests that this phenomenon may represent an intrinsic property of human

neurophysiology (Fox & Raichle, 2007). Furthermore, many studies have shown that RSNs are

highly reproducible and the metrics to study the connectivity of these RSNs show high reliability

over the course of months (Shehzad et al., 2009; Wisner, Atluri, Lim, & MacDonald, 2013) to

years (Guo et al., 2012; Choe et al., 2015). Although RSNs comprise brain regions that are found

in anatomically distinct locations, these regions show high resting state connectivity (rs-

connectivity) between each other. Given that RSNs resemble the neural patterns observed when

an individual performs a task, RSNs may be useful to predict the neural response and/or

behaviour in relation to a given task (Fox & Raichle, 2007; van den Heuvel & Hulshoff Pol,

2010). Importantly, the rs-connectivity of motor and FP networks correlate with motor and

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cognitive performance, respectively, in individuals with stroke (Fox & Raichle, 2007; Carter et

al., 2010; Park et al., 2011; Chen & Schlaug, 2013). This suggests that RSNs may provide

information on the state of recovery following stroke. Taken together, an analysis of the motor

and FP networks may help to better understand the relationship between these networks and

motor outcome after stroke.

Figure 2-8: Resting state network templates

Templates (in yellow) of the (A) motor network, (B) frontoparietal network, (C) visual network, and (D) executive

control network overlaid on a standard Montreal Neurological Institute (MNI) brain template.

Various methods are available to delineate RSNs from rs-fMRI data (van den Heuvel & Hulshoff

Pol, 2010). One approach involves “seed-based connectivity”. A seed (i.e., region-of-interest,

ROI) comprises a group of voxels (i.e., three-dimensional pixels that form the MR image) whose

location in the brain is chosen based on a priori assumptions for its relevance in the research

question of interest (van den Heuvel & Hulshoff Pol, 2010). Once the seed is defined, we

determine other brain regions whose BOLD signals are temporally correlated with it (Fox &

Raichle, 2007). This is a hypothesis-driven approach since the seed – which is deduced from

prior literature and/or experiments – provide a ‘starting point’ to guide our interpretations of the

regions that are connected with the seed. Another approach involves “independent component

analysis” (ICA). A component comprises regions that have temporally correlated BOLD signal.

Furthermore, components are said to be “independent” of each other since the regions that form

one component are anatomically different from the regions that form another component

(Beckmann et al., 2005). This is a data-driven approach since the rs-fMRI data set is analyzed as

a whole to determine distinct components that may be related to the question of interest

(Beckmann et al., 2005; Smith et al., 2009). However, it can sometimes be difficult to interpret

ICA results since we do not have a well-defined ‘starting point’ (or hypothesis) to guide our

understanding of these results. For my thesis, I use a seed-based connectivity approach given that

I have taken a hypothesis-based approach to explore the relationship between the motor and FP

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networks and motor outcome. Nonetheless, a data-driven approach, such as ICA, would likely

yield similar findings as the seed-based connectivity approach.

When RSNs are delineated from the rs-fMRI data, there are various methods that we can use to

further analyze the RSNs. In my thesis, I examine the connectivity between brain regions within

a RSN, such as the connectivity between the left and right M1 (both of which are part of the

motor network) (Chen & Schlaug, 2013; Carter et al., 2010; Park et al., 2011). I refer to this

analysis as “intra-network connectivity”. A second analysis technique I use is to explore the

connectivity between two separate RSNs, such as the connectivity between the motor and FP

networks (Chen et al., 2014; Onu, Badea, Roceanu, Tivarus, & Bajenaru, 2015; Wang, Liu,

Shen, Li, & Hu, 2015). I refer to this analysis as “inter-network connectivity”.

Both intra-network and inter-network connectivity analyses may be important to perform since

more recognition is starting to be placed on the fact that neural processes involve brain networks.

Traditionally, the brain has been studied using lesion patients which lead to the view that the

brain comprises regions with specialized centres (Sporns, 2011). However, this view cannot

account for the ability of the brain to produce complex patterns of behaviour, such as voluntary

movements and executive function, which involve the coordination of several brain regions

(Sporns, 2011). With the advancement in technology, such as computers and brain imaging, it is

much more feasible for neuroscientists nowadays to study how certain regions (or specialized

centres identified from lesion analyses) interact with each other (Sporns, 2011) to guide complex

behaviour, such as movement or cognitive processes (Sohn et al., 2000; Johansen-Berg &

Matthews 2002; Braver et al., 2005). Despite the emerging view to study networks and the

connections within and between these networks, previous rs-fMRI studies (Park et al., 2011; Yin

et al., 2012) that found a relationship between the M1 and DLPFC and motor outcome focused

on the connectivity between specific brain regions, as opposed to entire networks. Therefore, to

develop a deeper understanding of the brain and the changes in brain function after stroke, it is

important that we also explore the brain through a network perspective (Sporns, 2011). Taken

together, both of these analysis techniques can provide distinct, yet complementary, information

about RSNs.

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4 Summary

The human brain is highly inter-connected, both structurally and functionally (Sporns, 2011;

Mišić & Sporns, 2016). In the case of stroke, the theory of diaschisis (Feeney & Baron, 1986)

states that focal damage in the brain can lead to changes both nearby and remote from the lesion.

Consistent with this theory, the use of network analysis may, in part, help to identify regions (or

even entire networks) that may function together, despite being in anatomically distinct locations

(Mišić & Sporns, 2016). Thus, the application of networks can potentially aid in our

understanding of the brain and its response to injury.

Motor deficits are common and persistent after stroke. Individuals with hemiparesis have

difficulty executing movements, as actions are often slow and inaccurate. Lesions to the primary

motor cortex, premotor cortex, and/or corticospinal tract (among other areas) may subsequently

lead to deficits in the planning and execution of our movements (Shadmehr & Krakauer, 2008;

Sathian et al., 2011). Importantly, individuals with motor deficits may not only show problems in

motor behaviour, but may also show deficits in other processes as well, such as task-switching

(McDowd et al., 2003; Pohl et al., 2007; Serrien et al., 2007). This suggests that the brain is

highly inter-connected, and damage to movement may lead to other processes (e.g., task-

switching) traditionally studied independently from movement (Serrien et al., 2007), also being

compromised.

Movement in healthy individuals and those with stroke involves both motor and non-motor brain

regions (Fuster 2001; Wang et al., 2014). A motor learning model by Hikosaka and colleagues

(2002) suggests that motor and frontoparietal (FP) regions are involved in the early stages of

learning a novel/complex sequence of movements. In particular, the FP regions may help provide

feedback on movement accuracy and successful task completion which can be used to modify

future motor performance (Albert et al., 2009; Kim et al., 2015). Given that motor learning

principles are often applied in interventions for motor recovery (e.g., constraint-induced

movement therapy or robotic therapy) (Krakauer, 2006), motor and FP regions may be

implicated in motor outcome as well. To date, only two studies (Park et al., 2011; Yin et al.,

2012) have shown that the connectivity between motor and FP regions (e.g., primary motor

cortex (M1) and dorsolateral prefrontal cortex (DLPFC), respectively) is related to motor

outcome after stroke. However, it is unclear whether the M1-DLPFC connectivity is associated

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with better (Park et al., 2011) or worse (Yin et al., 2012) motor outcome. Furthermore, both

studies have only examined the connectivity between specific brain regions, as opposed to the

entire motor and FP networks, in relation to motor outcome. It is important to explore the motor-

FP relationship at the network level as well, given that many processes, such as movement,

involve the communication between multiple brain regions (Beckmann et al., 2005; Bullmore &

Sporns, 2009; Sporns, 2011).

Thus, the aim of my thesis is to better understand this brain-behaviour relationship by examining

brain networks (specifically, the motor and FP networks) in relation to motor outcome and task-

switching ability after stroke. To address this aim, I use rs-fMRI to examine the spontaneous

BOLD signal fluctuations at rest in regions that are anatomically distinct from each other.

Importantly, resting state fMRI analyses enable us to study resting state networks (RSNs), which

comprise brain regions whose BOLD signal are temporally correlated with each other. These

RSNs are thought to be important since they involve the same brain regions that are required

during the performance of certain tasks or behaviours. To study the motor and FP networks in

relation to motor outcome after stroke, I will analyze the resting state connectivity within the

motor and FP networks individually (i.e., intra-network connectivity) and between the motor and

FP networks (i.e., inter-network connectivity).

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Chapter 3 Objectives and Hypotheses

Objectives 1

1) To determine the relationship between intra-network connectivity of the motor network with

motor impairment, motor function, and task-switching performance.

2) To determine the relationship between intra-network connectivity of the frontoparietal

network with motor impairment, motor function, and task-switching performance.

3) To determine the inter-network connectivity between the motor and frontoparietal networks

with motor impairment, motor function, and task-switching performance.

2 Hypotheses

1) Participants with higher intra-network connectivity of the motor network will have: a) less

motor impairment; b) greater motor function; and c) better task-switching performance than

those with lower intra-network connectivity of the motor network.

2) Participants with higher intra-network connectivity of the frontoparietal network will have: a)

less motor impairment; b) greater motor function; and c) better task-switching performance than

those with lower intra-network connectivity of the frontoparietal network.

3) Participants with higher inter-network connectivity between the motor and frontoparietal

networks will have: a) less motor impairment; b) greater motor function; and c) better task-

switching performance than those with lower inter-network connectivity between the motor and

frontoparietal networks.

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Chapter 4 Manuscript

The manuscript is written in accordance with the submission guidelines for the journal Stroke.

Neural Coupling between Motor and Frontoparietal Networks Positively Correlates

with Motor Ability in Chronic Stroke Individuals Timothy K. Lam, HBSc; Deirdre R. Dawson, PhD; Kie Honjo, MD, PhD; Bernhard Ross, PhD; Malcolm

A. Binns, PhD; Donald T. Stuss, PhD; Sandra E. Black, MD; J. Jean Chen, PhD; Brian T. Levine, PhD;

Takako Fujioka, PhD; Joyce L. Chen, PhD

From the Heart and Stroke Foundation Canadian Partnership for Stroke Recovery (T.K.L., D.R.D., K.H., S.E.B.,

B.T.L., J.L.C.), Hurvitz Brain Sciences Research Program, Sunnybrook Research Institute (T.K.L., K.H., S.E.B.,

J.L.C.), Rehabilitation Sciences Institute (T.K.L., D.R.D., J.L.C.), Rotman Research Institute, Baycrest Centre

(T.K.L., D.R.D., B.R., M.A.B., D.T.S., S.E.B., J.J.C., B.T.L., T.F.), Department of Occupational Science and

Occupational Therapy (D.R.D.), Department of Medical Biophysics (B.R., J.J.C.), Dalla Lana School of Public

Health (M.A.B.), Department of Psychology (D.T.S., B.T.L.), Department of Neurology (D.T.S., S.E.B., B.T.L),

and Department of Physical Therapy (J.L.C.), University of Toronto, Toronto, ON, Canada; Center for Computer

Research in Music and Acoustics, Department of Music, Stanford Neuroscience Institute (T.F.), Stanford University,

Stanford, CA, USA.

Correspondence to Joyce L. Chen, PhD, Sunnybrook Research Institute, 2075 Bayview Avenue,

Room M6-176, Toronto, ON, M4N 3M5, Canada, (T) 416-480-6100 x85410, (F) 416-480-4223,

E-mail: [email protected]

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Abstract

Background and Purpose– Motor recovery is a process that involves the re-learning of

movements. Motor learning involves brain regions such as motor and frontoparietal cortex. The

integrity of these regions may thus be important for the recovery of movements after stroke.

Importantly, focal damage to one area of the brain can affect neural functioning within brain

networks implicated in the damage, and between distinct brain networks. Thus, the aim of this

study is to investigate how resting state connectivity within and between motor and

frontoparietal networks are affected post-stroke.

Methods– Twenty-seven chronic stroke participants underwent behavioral assessments and

magnetic resonance imaging. We implemented a seed-based resting state connectivity (rs-

connectivity) approach to define the motor (seed=primary motor cortex (M1)) and frontoparietal

(seed=dorsolateral prefrontal cortex (DLFPC)) networks. We analyzed the rs-connectivity within

each network (intra-network connectivity) and between both networks (inter-network

connectivity). We then performed correlations between: a) intra-network connectivity and scores

on motor and task-switching assessments; b) inter-network connectivity and scores on motor and

task-switching assessments.

Results– A) Intra-network: i) Participants with high rs-connectivity between M1 and

supplementary motor area (SMA) have less hand impairment and greater motor function than

those with low M1-SMA rs-connectivity; ii) Participants with high rs-connectivity between

DLPFC and mid-ventrolateral prefrontal cortex (mid-VLPFC) have less hand impairment than

those with low DLPFC-mid-VLPFC rs-connectivity. B) Inter-network: Participants with high rs-

connectivity between motor and frontoparietal networks have greater motor function than those

with lower motor-frontoparietal network rs-connectivity.

Conclusions– Connectivity within and between the motor and frontoparietal networks relate to

motor outcome post-stroke. We suggest that coupling between the motor and frontoparietal

networks may represent how well movements are re-learned in stroke survivors.

Key Words: resting state fMRI, motor impairment, motor function, motor network,

frontoparietal network, task-switching, chronic stroke

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Introduction

The human brain is immensely complex, and is highly inter-connected on both anatomical and

functional levels (Mišić & Sporns, 2016). Yet, researchers have traditionally studied the

dysfunction of the motor system and thus motor behavior post-stroke in isolation (Serrien, Ivry,

& Swinnen, 2007). Growing evidence suggests that the execution of actions may also involve

other brain regions, not directly involved in movement (Ward, Brown, Thompson, &

Frackowiak, 2003; Wang et al., 2014). Thus, further research is warranted to better understand

how motor and non-motor brain regions may work together to influence motor behavior and thus

outcome from stroke. This approach may be especially important because focal damage from

stroke can lead to diaschisis, whereby areas remote from the damaged site are also affected due

to a loss of neural input or connection (Feeney & Baron, 1986). To better understand the

phenomenon of diaschisis, there is growing interest in studying how brain connectivity is

affected post-stroke (Carter, Shulman, & Corbetta, 2012). A focal lesion may have widespread

effect over the entire brain, affecting brain functioning in more than one domain (Serrien et al.,

2007; Carter et al., 2010; Burke et al., 2014).

Motor recovery for stroke survivors involves the re-learning of how to plan and execute

movements (Krakauer, 2006). It is well-established that the process of motor learning in healthy

individuals (Hikosaka, Nakamura, Sakai, & Nakahara, 2002; Dayan & Cohen, 2011), and motor

learning and recovery in stroke survivors (Carter et al., 2010; Chen & Schlaug, 2013; Lefebvre et

al., 2015) involves a network of motor regions such as the primary motor cortex (M1),

supplementary motor area (SMA), and premotor cortex (Smith et al., 2009). These regions form

a neural network, defined as regions of the brain whose neural activity are temporally coupled.

However, mounting evidence also suggests that motor learning in healthy individuals (Hikosaka

et al., 2002; Dayan & Cohen, 2011; Albert, Robertson, & Miall, 2009; Kim, Ogawa, Lv,

Schweighofer, & Imamizu, 2015) and motor learning and recovery in stroke survivors (Ward et

al., 2003; Wang et al., 2014; Lefebvre et al., 2015) involves the dorsolateral prefrontal cortex and

parietal cortex, which are part of the frontoparietal (FP) network (Smith et al., 2009). Thus, the

FP network may facilitate comprehension of the feedback about movement (Dosenbach et al.,

2007; Albert et al., 2009; Kim et al, 2015), which can be used to modify and enhance motor

performance. The FP network is often involved in complex tasks, such as the Trail Making Test

(TMT) (Seeley et al., 2007; Li et al., 2015) which assesses task-switching performance (Delis,

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Kaplan, & Kramer, 2001; Stuss et al., 2001). Although motor learning and TMT are different

tasks, both require individuals to receive rapid feedback about current performance to determine

whether future actions require adaptation. Taken together, both the motor and FP networks may

be implicated in the re-learning of movements and thus motor recovery after stroke.

Only two studies (Park et al., 2011; Yin et al., 2012) to date have demonstrated that connectivity

between the M1 and DLPFC is associated with motor outcome. Park and colleagues (2011)

found that higher M1-DLPFC connectivity was related to better motor outcome. However, Yin

and colleagues (2012) report the opposite; specifically, higher M1-DLPFC connectivity was

related to worse motor outcome. Furthermore, both studies (Park et al., 2011; Yin et al., 2012)

examined the connectivity between specific brain regions (M1-DLPFC connectivity), as opposed

to the connectivity between entire brain networks (Motor-FP inter-network connectivity). Given

that neural networks, rather than isolated brain regions, are often implicated in movement (Mišić

& Sporns, 2016), it is important to study the brain comprising distinct, yet inter-connected,

networks that may be altered in response to stroke.

The aim of our study is to explore the connectivity within and between the motor and FP

networks in relation to motor outcome and task-switching ability after stroke. We use resting

state functional magnetic resonance imaging (rs-fMRI) to measure spontaneous blood oxygen

level-dependent (BOLD) fluctuations between spatially distinct brain regions that are temporally

correlated (Biswal, Yetkin, Haughton, & Hyde, 1995). Our objectives are: 1) To examine the

relationship for intra-network connectivity within the motor and FP networks separately with a)

motor ability; b) task-switching performance; and 2) To examine the relationship for inter-

network connectivity between the motor and FP networks with a) motor ability; b) task-

switching performance. We hypothesize the connectivity within and between the motor and FP

networks will be positively correlated with motor ability and task-switching performance.

Methods

I) Participants

Twenty-seven participants with chronic stroke gave informed written consent for a study

approved by the Baycrest Research Ethics Board. This cohort was part of a clinical trial

(NCT01721668) recruited to study the efficacy of music supported rehabilitation (MSR) in

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chronic stroke survivors. The present study involves the analysis of a subset of the baseline (pre-

intervention) data. Our study objectives are unrelated to those of the clinical trial. Details of the

clinical trial will be reported in future publications.

Study inclusion criteria were: first-time, unilateral ischemic stroke at least six-months post onset,

English-speaking, and without moderate to severe apraxia and/or aphasia. Participants were

included if residual motor impairment was stage 2 on the Chedoke-McMaster Stroke Assessment

(CMSA) Stage of Arm and Hand Impairment, with successful completion of at least one task in

stage 3 of the CMSA. Participants require near-normal hearing verified by clinical audiometry (<

40dB 250-2000Hz), and must not be significantly depressed (as reflected by a score of less than

27 on the Center for Epidemiological Studies-Depression scale) (Radloff & Teri, 1986). If the

participant was on antidepressants, he or she must have been on a stable dosage for at least 3

months with no change during the study period. Exclusion criteria were: clinically significant

spatial neglect, dementia, psychiatric disorders, severe pain and/or fatigue, formal music training

for more than 2 years within the past 10 years or for more than 10 years in total, and concurrently

participating in another clinical intervention trial during the study period.

II) Assessments

All participants underwent a battery of behavioral assessments comprising: CMSA Stage of Arm

(CMSA-Arm), CMSA Stage of Hand (CMSA-Hand), Action Research Arm Test (ARAT), and

Delis-Kaplan Executive Function System (D-KEFS) TMT condition #2 (TMT-2) and condition

#4 (TMT-4). The CMSA is an assessment of motor impairment scored from 1 (flaccid paralysis)

to 7 (normal movement) and has good validity with the Fugl-Meyer Assessment (Gowland et al.,

1993). The ARAT is an assessment of motor function and is scored from 0 (no motor function)

to 57 (normal motor function) (Yozabatiran, Der-Yerghiaian, & Cramer, 2008). Motor

impairment involves movement quality relative to normal human physiology and motor function

involves completion of motor tasks. The TMT is an assessment of task-switching involving

number sequencing (TMT-2) and number-letter switching (TMT-4) measured according to

completion time (in seconds) (Delis, Kaplan, & Kramer, 2001).

III) MRI Protocol

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Participants underwent MRI scanning on a Siemens MAGNETOM TrioTim 3.0-Tesla System

(Erlangen, Germany). We acquired three-dimensional T1-weighted high resolution anatomical,

T2-weighted high-resolution anatomical, fluid-attenuated inversion recovery (FLAIR), and rs-

fMRI scans. Details of scan protocols follow. Three-dimensional T1-weighted: TR, 2000 ms;

TE, 2.63 ms; flip angle, 9°; voxel size, 1x1x1 mm3; field of view (FOV), 192x256 mm

2; matrix

size, 192x256 voxels; 160 axial slices; slice thickness, 1 mm. T2-weighted: TR, 2900 ms; TE 1,

19 ms; TE 2, 102 ms; flip angle, 180°; voxel size, 0.9x0.9x3 mm3; FOV, 185.68x220 mm

2;

matrix size, 216x256 voxels; 48 axial slices; slice thickness, 3 mm. FLAIR: TR, 9000 ms; TE, 96

ms; flip angle, 165°; voxel size, 0.9x0.9x5 mm3; FOV, 185.5x224 mm

2; matrix size, 212x256

voxels; 32 axial slices; slice thickness, 5 mm. Rs-fMRI: TR, 2000 ms; TE, 27 ms; flip angle, 70°;

voxel size, 3x3x3 mm3; 180 volumes; FOV, 192x192 mm

2; matrix size, 64x64 voxels; 40 axial

slices; slice thickness, 3 mm; gap, 0.5 mm. Participants were instructed to keep their eyes open

and fixated on a cross. We collected physiologic information (heart beat and respiration) using a

pulse oximeter and respiration belt.

IV) Data Analysis

IVa) Behavioral Analyses

Performance on the TMT involves several cognitive processes (Crowe, 1998; Stuss et al., 2001).

Performance on the TMT-2 and TMT-4 requires the participant to visually search an array of

numbers and letters on a page and to connect the numbers and/or letters in numerical or

alphabetical order. To perform the TMT-4, the participant needs to alternate between numbers

and letters, a task that implicates task-switching (Stuss et al., 2001). Task-switching can be

measured by calculating the proportion score (TMT-ps), which removes the influence of the

participant’s speed to visually search and connect the array of numbers on the page for TMT-2,

isolating the time for task-switching in TMT-4 (Stuss et al., 2001). The TMT-ps is calculated by

subtracting the completion time for TMT-2 from the completion time for TMT-4, and then

dividing this difference by the completion time for TMT-2, or simply: TMT-ps= (TMT-4 –

TMT-2)/TMT-2.

IVb) Image Processing

i) Lesion

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Stroke lesions were manually traced by a neurologist (KH) who was blinded to the current study

objectives and to the participant demographics. Lesions were traced on T1-weighted images

using the imaging software ITK-SNAP (Yushkevich et al., 2006). T2-weighted and FLAIR

images were simultaneously reviewed to confirm lesion tracings. In addition, all other visible

infarctions (including lacunar infarction), Virchow-Robin vascular spaces, and subdural

hematoma were traced. A mask was then created from all tracings and used to exclude these

areas from the registration procedure and statistical analyses. Lesion masks were non-linearly

registered to standard Montreal Neurological Institute (MNI) space with an affine transformation

using FMRIB’s Non-Linear Image Registration Tool (FNIRT). Lesion volume was determined

with the lesion masks in standard space. Images of the lesion mask were flipped along the x-

plane such that the lesions were displayed on the right side of the structural and functional

images for all analyses.

ii) Preprocessing and Nuisance Regressors

Physiological regressors (heart beat and respiration artifacts) were first removed from the raw

data using the RETROICOR algorithm (Glover, Li, & Ress, 2000) in AFNI. All subsequent

analyses of the data, were performed using FMRIB Software Library (FSL) (Jenkinson,

Beckmann, Behrens, Woolrich, & Smith, 2012) version 5.0. The rs-fMRI images were

preprocessed using the FMRI Expert Analysis Tool (FEAT). Preprocessing steps included head

motion correction, slice time correction to the middle slice, spatial smoothing with a Gaussian

kernel of 6 mm full width at half maximum, and high pass temporal filtering at 0.01 Hz. FSL’s

Brain Extraction Tool (BET) was used to remove non-brain tissue.

The time series for cerebrospinal fluid (CSF), white matter (WM), and head motion were

extracted as nuisance regressors from the rs-fMRI data. To obtain the time series of CSF and

WM, we created masks of the CSF and WM by segmenting the T1-weighted image using

FMRIB’s Automated Segmentation Tool (FAST). The CSF and WM masks were eroded twice to

ensure the masks only contained voxels in CSF and WM. Next, the masks were transformed to

functional space using FMRIB’s Linear Image Registration Tool (FLIRT). The mean time series

of CSF and WM was extracted from voxels in each CSF and WM mask, respectively, from the

preprocessed rs-fMRI data. The time series for the six motion parameters were obtained with

MCFLIRT. The average time series for CSF, WM, and six motion parameters were included as

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regressors of no interest in the GLM. The residual rs-fMRI data, free of these nuisance

regressors, was then used in further analyses.

IVc) Seed Masks

The RSNs of interest include: motor, FP, visual, and exec (Smith et al., 2009). We selected the

following seeds for each RSN: M1 for motor, DLPFC for FP, primary visual cortex (DeYoe et

al., 1996) (V1) for visual, and ACC for exec [Figure 4-1]. The visual network was chosen as a

control since we do not expect regions implicated in the processing of basic visual stimuli, such

as flashing checkerboards (Laird et al., 2011), to influence performance on the motor

assessments used in this study. The exec network was chosen as a second control since it is also

implicated in cognition (response conflict), but is thought to be functionally distinct from the FP

network (MacDonald et al., 2000; Dosenbach et al. 2007; Seeley et al., 2007).

Figure 4-1: Seed masks for the resting state networks

Seed masks for the following resting state networks: (A) motor network, (B) frontoparietal network, (C) visual

network, and (D) exec network are overlaid on a Montreal Neurological Institute (MNI) template.

All seeds were placed in the left hemisphere so that the seed did not overlap with the lesion

mask, which was located in the right side of the image for all participants. Each seed was defined

by taking the average peak coordinate (in Montreal Neurological Institute (MNI) 2 mm standard

space) from a set of relevant fMRI studies (described below) and creating an 8 mm radius around

it. Seed masks were non-linearly transformed into functional space using FNIRT. For each seed,

the time course for all voxels in the mask was extracted from the residual rs-fMRI data.

Given our interest in the motor outcome of the arm and hand, the M1 seed was derived from

studies reported in a meta-analysis (Mayka, Corcos, Leurgans, & Vaillancourt, 2006) with

arm/elbow and hand/finger representations [Appendix 7-1, coordinates in MNI space]. The peak

coordinate averaged across arm/elbow paradigms was (–28, –24, 62) and the peak coordinate

averaged across hand/finger paradigms was (–36, –20, 56). To have both peak coordinates

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occupy equal volumes in a single M1 seed, we used a 6 mm radius (instead of an 8 mm radius) to

ensure the total voxel count (242 voxels) was as close as possible to the total voxel count in an 8

mm seed (257 voxels). To ensure the total voxel counts in the M1 seed and 8 mm seeds were

equal, we added 15 voxels to the most superior voxel (–28, –24, 68) of the M1 seed. Specifically,

we created a 4-voxel-by-4-voxel-by-1-voxel (8 mm x 8 mm x 2 mm) rectangular prism

(inclusive from x= –24 to x= –30, y= –20 to y= –26, and z= 68 to z= 66) to surround the most

superior voxel of the M1 seed. Importantly, the added voxels were part of the motor cortex,

according to the Jülich Histological Atlas (Eickhoff et al., 2007).

The DLPFC seed was derived from studies reported in a meta-analysis (Niendam, Laird, Ray,

Dean, Glahn, & Carter, 2012) summarizing task-switching paradigms [Appendix 7-2,

coordinates in MNI space]. The peak average coordinate was (–43, 25, 24).

The V1 seed was derived from studies that utilized a flashing checkerboard paradigm that is

known to elicit V1 activity [Appendix 7-3, coordinates in MNI space]. The peak average

coordinate was (–6, –88, 8).

The ACC seed was derived from studies reported in a meta-analysis (Niendam et al., 2012)

summarizing Stroop Task paradigms, which implicate the ACC in response inhibition

[Appendix 7-4, coordinates in MNI space]. The peak average coordinate was (–3, 25, 29).

IVd) Intra-Network Connectivity

We first determined whether intra-network motor connectivity correlated with performance on

the behavioral assessments. To extract the motor network, we performed a first-level FEAT

analysis. Here we input the mean time series of the M1 seed as an explanatory variable (EV) in

the GLM to find voxels that shared a similar time course with the left M1, for each participant.

Next, we performed a group-level FEAT analysis whereby outputs from the first-level FEAT

were input, as well as the demeaned score for a behavioral assessment of interest (CMSA-Arm,

CMSA-Hand, ARAT, or TMT-ps). In total, four group-level FEAT analyses were performed,

one for each assessment. The contrast for the first EV gives voxels correlated with the M1 seed.

The contrast for the second EV determines voxels whose correlation with the seed is modulated

by performance on the behavioral assessment. Five additional covariates (age, time since stroke,

lesion volume, sex and years of education) were also included in the GLM. The same procedure

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was repeated to determine the relationship between intra-network connectivity within the FP

network and performance on the motor and task-switching assessments.

IVe) Inter-Network Connectivity

We next determined whether inter-network connectivity between the motor and FP networks

(Motor-FP) was correlated with performance on the motor and task-switching assessments. We

delineated the motor and FP networks following the methods described above. However, we did

not include the above-mentioned covariates in the GLM since we controlled for these variables at

a later point in the analyses. To standardize the regions included in the motor and FP networks

for each participant, we created a mask for each of the motor and FP networks by applying a

cluster threshold at z >2.5, p< 0.05 to the resulting group image maps, which were then

binarized. The masks were non-linearly transformed to the functional space of each participant.

Although the motor and FP networks are spatially distinct, any overlapping voxels were removed

from the motor network. We then extracted the BOLD time course from voxels of the motor and

FP network masks, from each participant’s residual resting state fMRI data. Next, Pearson’s

correlation was computed on these time series as a measure of inter-network connectivity. This

correlation coefficient was then correlated with scores from the behavioral assessment of

interest. The same procedure was repeated for inter-network connectivity between the motor and

visual networks (Motor-Visual) and between the motor and exec networks (Motor-Exec).

V) Statistical Analysis

Va) Intra-network Connectivity

To ensure identification of the motor network, a mask of the motor network defined in a healthy

set of participants by Smith et al. (2009) was voxel thresholded at z >3.1. This mask was

inputted as a pre-threshold mask to restrict the statistical analysis to regions typically found in

the motor network of healthy individuals. The same procedure was repeated to define a mask of

the FP network and inputted as a pre-threshold mask for the FP network analysis.

Cluster thresholding was applied to correct for multiple comparisons. Clusters were considered

significant at z >2.5, p< 0.05. We report the peak coordinate and number of voxels (#voxels) in

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significant clusters. Non-significant analyses are reported with voxel thresholding at z >2.5, p<

0.01, uncorrected (see Figure 5-8 for images from non-significant analyses).

Vb) Inter-network Connectivity

A Pearson’s correlation was computed for each participant between time series of the motor and

FP networks. The Pearson’s r-value represents the rs-connectivity between the motor and FP

networks. A Fisher’s r-to-z transformation was applied, which yielded rs-connectivity values that

are normally distributed. To determine the correlation between inter-network connectivity and

performance on clinical assessments, a partial Spearman’s correlation was calculated between

the Fisher z-score with the behavioral assessment scores (CMSA-Arm, CMSA-Hand, ARAT,

and TMT-ps). Covariates (age, lesion volume, and years of education) were controlled for in the

Spearman’s correlation. The same procedure was repeated to determine the correlation between

inter-network connectivity and performance on clinical assessments for the Motor-Visual and

Motor-Exec conditions. A total of 12 Spearman’s correlations were performed (to determine how

the three inter-network connectivity conditions (Motor-FP, Motor-Visual, Motor-Exec) correlate

with each of the four behavioral assessments). We applied a Bonferroni correction to correct for

multiple comparisons with correlations considered significant at p< 0.004 (i.e., 0.05/12 tests).

We then used the Williams T2 test statistic (Steiger, 1980) to assess whether two dependent

correlation coefficients are significantly different from each other [Appendix 7-5]. A T2-test

value greater than 1.71 (degrees of freedom=24) was considered significant at p< 0.05. The T2-

test value was assessed using a one-sided test of significance since we expected the correlation

coefficient between Motor-FP connectivity with behavioral assessment scores to be higher than

that associated with the control conditions. All statistics were performed using SPSS version

22.0.

Results

Participant demographics and performance on behavioral assessments are summarized in

Table 4-1 (group average data) and Appendix 7-6 (individual participant data). Lesion tracings

of all participants are displayed in Figure 4-2.

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Table 4-1: Participant Demographics and Performance on Behavioral Assessments

Characteristic (N=27)

Age, years 61.3±10.7 (40-79)

Sex

Male

Female

18 (66%)

9 (33%)

Time since stroke, years 5.5±6.5 (0.6-25)

Lesion location

Left hemisphere

Right hemisphere

11 (41%)

16 (59%)

Lesion volume, cm3 65.6±101.8 (0.5-401.6)

Years of education 15.6±2.8 (10-20)

Dominant hand affected*

Yes

No

10 (38%)

16 (62%)

Chedoke-McMaster Stroke Assessment

Stage of Arm Impairment 3 (2-5)

Stage of Hand Impairment 3 (2-5)

Action Research Arm Test 25.3±21.6 (0-57)

Delis-Kaplan Executive Function System

Trail Making Test (Condition 2) (seconds) 49.4±24.3 (28-127)

Trail Making Test (Condition 4) (seconds) 139.1±82.3 (52-380)

Trail Making Test Proportion Score 0.9±1.16 (0.7-5.8) Data are presented as mean±SD (range) for continuous variables and n (%) for categorical variables. Chedoke-

McMaster Stroke Assessment is presented as median (range). *Handedness data was not collected for the first

participant.

I) Intra-network Connectivity

Participants with higher rs-connectivity between left M1 and midline SMA have significantly

higher CMSA-Hand stage (i.e., less hand impairment) [z=4.06; p<0.001; peak coordinate: 10, –2,

48; #voxels in cluster=662] and higher ARAT score (i.e., greater motor function) [z=3.10;

p=0.03; peak coordinate: 10, –32, 62; #voxels in cluster=188] than those with lower M1-SMA

rs-connectivity [Figure 4-3, panels A & B]. Intra-network connectivity of the motor network

was not significantly correlated with CMSA-Arm [z=3.32; p<0.001; coordinate: –8, –4, 52].

Intra-network connectivity of the motor network was not significantly correlated with TMT-ps

[z=2.91; p<0.002; coordinate: –8, –36, 46].

Participants with higher rs-connectivity between left DLPFC and left BA 45a (mid-ventrolateral

prefrontal cortex (mid-VLPFC)) have higher CMSA-Hand stage [z=3.54; p=0.02; peak

coordinate: –48, 34, 16; #voxels in cluster=228] than those with lower DLPFC-mid-VLPFC rs-

connectivity [Figure 4-3, panel C]. Intra-network connectivity of the FP network was not

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significantly correlated with either CMSA-Arm [z=3.48; p<0.001; coordinate: –50, 38, 16] or

ARAT scores [z=3.12; p<0.001; coordinate: –48, 38, 12]. Intra-network connectivity of the FP

network was not significantly correlated with TMT-ps [z=3.30; p<0.001; coordinate: –48, –64, –

10].

Figure 4-2: Lesion masks of stroke participants in study

Individual lesion maps (in red) are displayed on the right hemisphere and superimposed on the standard Montreal

Neurological Institute template. The transverse slice of the lesion with the largest cross-sectional area is shown. (“s”

indicates subject).

Figure 4-3: Intra-network connectivity results

The rs-connectivity between the left primary motor cortex (M1) (seed) and midline supplementary motor area

(SMA) is correlated with performance on the Chedoke-McMaster Stroke Assessment Stage of Hand (CMSA-Hand)

(A) and Action Research Arm Test (B). The rs-connectivity between the left dorsolateral prefrontal cortex (DLPFC)

(seed) and left Brodmann Area (BA) 45a (mid-ventrolateral prefrontal cortex (mid-VLPFC)) is correlated with

CMSA-Hand stage (C).

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II) Inter-Network Connectivity

Motor-FP connectivity is positively correlated with the ARAT score (rs(22)=0.578, p=0.003)

[Figure 4-4]. Motor-Visual connectivity and Motor-Exec connectivity were not significantly

correlated with the ARAT (rs(22)=0.245, p=0.248; rs(22)=0.359, p=0.085, respectively). The

correlation between Motor-FP connectivity and the ARAT was significantly higher than the

correlation between Motor-Exec connectivity with the ARAT (p=0.037, one-sided). The

correlation between Motor-FP connectivity with the ARAT showed a trend towards significance

as being higher than the correlation between Motor-Visual connectivity and the ARAT (p=0.078,

one-sided). Correlations between the Motor-FP connectivity and the CMSA-Arm and CMSA-

Hand scores were not significant (rs(22)=0.394, p=0.057; rs(22)=0.522, p=0.009, respectively).

The correlation between the Motor-FP connectivity and the TMT-ps was not significant

(rs(22)=0.233, p=0.296).

Figure 4-4: Inter-network connectivity results

Partial correlation graphs of the residuals for the inter-network connectivity between the motor and frontoparietal

networks (Motor-FP) with Action Research Arm Test (ARAT). Asterisks represent significant partial Spearman’s

correlations. A significant correlation was found between Motor-FP and ARAT (A). No significant correlation was

found for the inter-network connectivity between the motor and visual networks (Motor-Visual) and ARAT (B) or

between the inter-network connectivity between the motor and exec networks (Motor-Exec) and ARAT (C). The

correlation coefficient (rs-value) for the Motor-FP connectivity and ARAT is significantly higher than the rs-value

for the Motor-Exec connectivity and ARAT.

Discussion

In this study, we examined the relationship between rs-connectivity of the motor and FP

networks and motor outcome after stroke. We report three main findings: 1) rs-connectivity

between the motor and FP networks correlates with motor function; 2) within the FP network, rs-

connectivity between left DLPFC and left mid-VLPFC correlates with motor impairment; 3)

within the motor network, rs-connectivity between left M1 and midline SMA correlates with

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motor impairment and function. Collectively, our results suggest that motor and FP networks

separately – and importantly their association – may be related to motor outcome after stroke.

I) Inter-Network Connectivity

To our knowledge, a novel finding from our study is that Motor-FP network connectivity is

positively correlated with motor function. That is, individuals with higher Motor-FP connectivity

have better motor function, and those with lower Motor-FP connectivity have worse motor

function. This relationship was selective to the motor and FP networks as neither the Motor-

Visual nor Motor-Exec connectivity correlated with motor function.

Our results support findings from Park and colleagues (2011) who found that individuals with

higher rs-connectivity between M1 and DLPFC have better motor outcome than those with lower

M1-DLPFC rs-connectivity. However, we show for the first time that the relationship between

the motor and FP networks may not only be limited to specific regions, but may also involve the

entire network. The discrepant results from Yin and colleagues (2012) may, in part, be due to the

different methods used in their study. To determine the relationship between rs-connectivity and

motor outcome, both our study and Park et al. (2011) use a correlational analysis whereas Yin et

al. (2012) use a subtraction analysis.

One interpretation of the inter-network results is that motor and FP networks may be important

in the execution of motor sequences that are fluid and purposeful after stroke. In healthy

individuals, the FP network is thought to facilitate in the learning of movements that are

challenging (Hikosaka et al., 2002; Albert et al., 2009; Kim et al., 2015). In stroke survivors,

even simple movements can be challenging to perform, and thus the FP network may similarly

assist in organizing a set of movements. The FP network may be involved in the integration of

feedback (Dosenbach et al., 2007), such as movement accuracy (Albert et al., 2009; Kim et al.,

2015). The integration of this information may enable individuals to quickly adapt and re-learn

the proper movements during rehabilitation. Furthermore, the FP network may be involved in the

consolidation of motor skills (Robertson, 2009; Kantak, Sullivan, Fisher, Knowlton, & Winstein,

2010), which can help to maintain the practice effects gained from rehabilitation. Taken together,

coupling between motor and FP networks may involve the integration of motor sequence

information to enhance motor performance after stroke.

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Alternatively, the coupling between the motor and FP networks may help provide cognitive

resources to plan and execute movements. The FP network is implicated in aspects of cognition

(Seeley et al., 2007; Dosenbach et al., 2007; Li et al., 2015), which may help provide attentional

and working memory resources (Seeley et al., 2007; Dosenbach et al., 2007) that potentially aid

stroke survivors to successfully perform a sequence of movements. In particular, the involvement

of the FP network may assist individuals to focus on the most relevant information from the

environment and to efficiently manipulate this information. Thus, stroke survivors can select the

appropriate movements to interact with stimuli and/or complete a given task. This interpretation

is consistent with previous research that has shown cognitive function is positively correlated

with motor outcome (Mullick, Subramanian, & Levin, 2015). Furthermore, the use of cognitive

strategies is suggested to enhance motor outcome in stroke survivors (Sharma, Pomeroy, &

Baron, 2006; McEwen, Polatajko, Huijbregts, & Ryan, 2015). Together, motor and FP coupling

may involve the application of cognitive resources to supplement the motor process. It is

important to note that this interpretation is not mutually exclusive from the first interpretation

since cognitive processes, such as attention or memory, are also involved in motor learning

(Taylor & Ivry, 2012). Therefore, both interpretations may be simultaneously valid.

II) Intra-Network Connectivity

Within the FP network, we also report novel findings that rs-connectivity between DLPFC and

mid-VLPFC correlates with hand impairment. One interpretation is that mid-VLPFC and DLPFC

may be involved in the retrieval and reconsolidation of motor skills. Based on a working memory

model by Petrides (2005), the mid-VLPFC and DLPFC are thought to function in a hierarchical

manner. Specifically, the mid-VLPFC is involved in ‘lower order’ functions with active retrieval

of past experiences (Petrides, 2005; Badre & Wagner, 2006). Thus, the mid-VLPFC may select

the most relevant movement pattern for the current task, from a set of alternative movement

patterns. The DLPFC is involved in ‘higher-order’ functions with the manipulation of

information from various brain regions (Petrides, 2005). Thus, the DLPFC may use the selected

movement pattern from mid-VLPFC to organize and coordinate movements for task

performance. The ability to retrieve the appropriate movement pattern and apply the movements

for successful task performance may lead to reconsolidation of the movement pattern. Taken

together, the mid-VLPFC and DLPFC may help strengthen motor skills previously re-learned to

enhance motor performance.

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Alternatively, the DLPFC and mid-VLPFC may be involved in determining and monitoring the

proper actions required for a motor task. Based on an executive function model by Stuss and

Alexander (2007), the mid-VLPFC is involved in setting the stimulus-response relationship,

which may help to determine the appropriate movements to interact with a stimulus in the

environment. Stuss and Alexander (2007) also suggest the DLPFC is involved in monitoring task

execution, which may help to adjust performance and anticipate events. Taken together, the

coupling between DLPFC and mid-VLPFC may help stroke survivors select and optimize their

movements.

Interestingly, the DLPFC and mid-VLPFC are also thought to mediate task-switching (Badre &

Wagner, 2006). In our study, however, we did not find a relationship between our intra-network

or inter-network connectivity measures and TMT performance. One reason for this could be

related to the TMT assessment itself. The TMT-ps measure may not be sensitive enough to

assess task-switching performance, given that the TMT implicates many cognitive processes,

such as attention and working memory (Gaudino, Geisler, & Squires, 1995; Crowe, 1998; Stuss

et al., 2001; Oosterman et al., 2010; Cepeda, Blackwell, & Munakata, 2013). This makes it

difficult to dissociate the different cognitive processes that may be related to motor and/or FP

network connectivity after stroke. Furthermore, the influence of motor processes (e.g., motor

speed) (Crowe, 1998) involved in the TMT is accounted for in the TMT-ps measure (Stuss et al.,

2001). This makes the TMT-ps measure more related to cognitive processes only, rather than a

measure involving both motor and cognitive processes. Thus, a paradigm more representative of

task-switching motor performance may better relate to our intra- network and inter-network

connectivity measures. An alternative paradigm that can be used to measure task-switching is

discussed in the section Limitations and Future Directions.

Our finding that higher rs-connectivity between M1 and SMA correlates with less hand

impairment and greater motor function is consistent with prior literature. Previous findings have

shown greater activity (Favre et al., 2014) and higher coupling (Grefkes et al., 2008; Rehme,

Eickhoff, Wang, Fink, & Grefkes, 2011) between M1 and SMA during movement is associated

with better motor recovery. We suggest that stroke survivors who exhibit greater temporal

coupling between M1 and SMA might have better motor outcome than those with lower M1-

SMA rs-connectivity because they engage in motor planning processes (Tanji & Shima, 1994) to

prepare and sequence movements. Specifically, the SMA is implicated in organizing movements

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prior to and during movement execution. Therefore, the coupling between M1 and SMA is

important for the development of motor plans that contribute towards the execution of

purposeful, appropriate, and coordinated movements.

III) Limitations and Future Directions

As previously discussed, one limitation was that we did not find a significant relationship for

intra-network or inter-network connectivity with TMT-ps. The TMT is a cognitive-based task-

switching assessment since it involves shifting between abstract concepts (numbers and letters).

Future studies may consider assessing Motor-FP coupling using a motor-based task-switching

paradigm in which participants alternate hand use during a finger tapping task (Serrien et al.,

2007). This may be a more appropriate task since both motor and cognitive processes are

implicated, whereby individuals apply cognitive processes (task-switching) in the context of

movement (Serrien et al., 2007).

Furthermore, we found no significant relationship between intra-network or inter-network

connectivity and CMSA-Arm assessment. One reason may involve the fact that a majority of our

participants (fourteen of twenty-seven) scored stage 3 on the CMSA-Arm, which may lead to

difficulty in interpolating results from a correlational analysis between rs-connectivity and

CMSA-Arm. Future studies may also consider using additional measures to assess motor

outcome to determine whether certain aspects of movement, such as speed or force, are

associated with motor and FP network connectivity. It is also important to determine whether the

results from our study can be replicated in other stroke populations. Lastly, future work may

consider exploring in greater detail the network characteristics (e.g., hubs) (Mišić & Sporns,

2016) of the motor and FP networks to better understand the critical regions and/or mechanisms

that may underlie the relationship between inter-network connectivity and motor outcome after

stroke.

Conclusion

Collectively, our findings suggest that rs-connectivity within and between the motor and FP

networks are associated with motor outcome. We suggest that temporal coupling between the

motor and FP networks may, in part, represent how well stroke survivors can re-learn

movements after stroke.

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Sources of Funding

The clinical trial was funded by the Canadian Institutes for Health Research (CIHR

MOP119547) and Heart and Stroke Foundation (HSF 000421). T.K.L. was funded by the

Canadian Partnership for Stroke Recovery Start-up Funds, Rehabilitation Sciences Institute, and

Ontario Graduate Scholarship.

Disclosures

None.

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Chapter 5 Discussion

1 Review of study findings

The aim of my thesis is to explore the motor and frontoparietal (FP) networks and their

association with motor outcome and task-switching ability after stroke. Three major findings are

reported from this study:

1) Individuals with higher inter-network connectivity between the motor and FP networks

(Motor-FP connectivity) have higher Action Research Arm Test (ARAT) scores (i.e., better

motor function) than those with lower Motor-FP connectivity. Thus, these results support

hypothesis 3b.

2) Individuals with higher resting state connectivity (rs-connectivity) between the left

dorsolateral prefrontal cortex (DLFPC) and left mid-ventrolateral prefrontal cortex (mid-

VLPFC) have higher CMSA-Hand stage (i.e., lower hand impairment) than those with lower

DLPFC-mid-VLPFC rs-connectivity. Thus, these results support hypothesis 2a.

3) Individuals with higher rs-connectivity between the left primary motor cortex (M1) and

midline supplementary motor area (SMA) have better CMSA-Hand stage and higher ARAT

scores than those with lower M1-SMA rs-connectivity. Thus, these results support hypotheses 1a

and 1b.

These results add to the literature suggesting that both the motor and FP networks may be

important for motor outcome after stroke. Specifically, the inter-network and intra-network

results demonstrate that individuals with higher coupling in neural activity between and within

the motor and FP networks have better motor outcome. We interpret these findings in the context

of motor learning, given prior models (Hikosaka et al., 2002) and/or studies (Albert et al., 2009;

Kim et al., 2015) that have suggested the FP network is implicated in motor learning in healthy

individuals. Nonetheless, other interpretations of our results are certainly possible and will be

discussed in this chapter.

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2 Inter-network connectivity

2.1 Inter-network connectivity between motor and frontoparietal networks

The results from this study demonstrate that individuals with higher rs-connectivity between the

motor and FP networks (Motor-FP connectivity) have better motor function than those with

lower Motor-FP connectivity. Importantly, this relationship appears to be specific to the motor

and FP networks, as neither the inter-network connectivity between the motor and visual

networks (Motor-Visual connectivity) nor the inter-network connectivity between the motor and

executive control networks (Motor-Exec connectivity) correlated with the ARAT score [Figure

4-4]. Similarly, a comparison of the correlation coefficients using the Williams’ T2 test statistic

for dependent correlations suggests that the correlation for Motor-FP connectivity with the

ARAT is significantly greater than the correlation for Motor-Exec connectivity with the ARAT.

To my knowledge, only two rs-fMRI studies (Park et al., 2011; Yin et al. 2012) have examined

the relationship between rs-connectivity of motor and FP brain regions with motor outcome.

However, these two studies present discrepant results. In particular, Park and colleagues (2011)

found that individuals with higher rs-connectivity between M1 and DLPFC at the subacute stage

post-stroke have better motor outcome at the chronic stage. These findings support our results.

Conversely, Yin and colleagues (2012) found that individuals with higher rs-connectivity

between M1 and DLPFC have worse motor outcome at the chronic stage.

The results from our study are consistent with the findings from Park et al. (2011) in which

higher rs-connectivity between the M1 and DLPFC is associated with better motor outcome.

However, we demonstrate for the first time that this relationship is also found between the motor

and FP networks. Previous studies (Park et al., 2011; Yin et al., 2012) use a “brain-specific

approach” whereby the focus is on the rs-connectivity between specific motor and FP regions

(i.e., M1 and DLPFC) that are correlated with motor outcome. However, there is increasing

evidence to suggest that a brain-specific approach may not be sufficient to explain complex

processes, such as movement, given that these processes do not simply involve single (or

isolated) regions (Fuster, 2001; Hikosaka et al., 2002; Shadmehr & Krakauer, 2008). Studies that

examine neural activity in a paradigm for movement often find many regions that are associated

with performance (Sohn et al., 2000; Cunnington, Windischberger, Deecke, & Moser, 2002;

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Johansen-Berg & Matthews, 2002; Braver et al., 2005). This suggests that movement is a process

that involves multiple brain regions, or in other words, a “network”.

As discussed in section 2.4 (Frontoparietal network), a “network” comprise regions that have its

neural activity temporally correlated with each other (Sporns, 2011). In this study, we used a

seed-based connectivity approach to specifically examine the motor and FP networks

holistically. Given the approach we used, two alternative methods may be suggested: 1) use a

“brain-specific approach” to examine the connectivity of the M1 and/or DLPFC seed with the

entire brain; and 2) use network metrics (i.e., graph theory) (Bullmore & Sporns, 2011) to study

the motor and FP networks. The first method can help determine whether a single region in one

network (e.g., M1 seed) is connected with regions in other networks (e.g., FP network).

However, it does not provide us a holistic view of whether these two networks couple together

(which is part of the research question). The second method can provide details on the network

characteristics underlying our findings and is a logical progression of the current study.

Nonetheless, I believe the results from our study are still merited, particularly from a ‘proof of

concept’ perspective. Specifically, it is important to first determine whether these two networks

couple together such that we have a rationale to study the motor and FP networks in greater

detail, with graph theory analysis approaches.

Networks allow us to view the brain holistically and to hypothesize and/or determine remote

regions in the brain that may communicate during certain tasks. The communication within and

between networks not only produces complex neural patterns, but these patterns are necessary

precursors for the performance of complex behaviours. Although the brain-specific approach is

often used in neuroanatomy to link brain structure with a specific function, a network approach

may help to better understand the brain by exploring its organization, its functions, and its ability

to recover after injury, such as stroke. Consistent with this rationale to explore the brain from a

network perspective, our results suggest that motor outcome not only involves specific brain

regions, but may also involve entire motor and cognitive networks.

One potential explanation for the discrepant results by Yin et al. (2012) could be related to their

method in exploring the relationship of rs-connectivity between motor and FP regions and motor

outcome. Specifically, stroke survivors were categorized according to whether they had a

‘mild/moderate’ or a ‘severe’ motor impairment. As a result, Yin and colleagues (2012)

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performed subtraction analyses (e.g., ‘severe’ subtract ‘mild/moderate’) to determine rs-

connectivity differences between groups. However, the categorization of ‘mild/moderate’ versus

‘severe’ is a course measure of impairment which limits their ability to determine whether

participants placed in the same group have rs-connectivity differences between each other. In

contrast, correlational analyses (used in both our study and Park et al. (2011)) determine whether

a relationship exists between rs-connectivity and motor performance. Furthermore, correlational

analyses allow us to detect anomalous cases or outliers that could influence the results, which

may warrant further investigation of these cases (Poldrack, 2007). Thus, the different methods

used in analyzing the rs-fMRI data may have contributed to the different results found in the

study by Yin and colleagues (2012).

Our inter-network results are interpreted in the context of integrating motor sequence

information. Specifically, individuals with higher Motor-FP connectivity may recruit the motor

and FP networks more effectively to perform a sequence of movements efficiently and fluidly

after stroke. In healthy individuals, motor learning is thought to involve the motor and FP

networks (Hikosaka et al., 2002; Ma, Narayana, Robin, Fox, & Xiong, 2011; Vahdat, Darainy,

Milner, & Ostry, 2011; Bonzano et al., 2015) when initially learning complex movements (e.g.,

finger tapping based on a random sequence, or reaching for a target in which arm trajectory is

interfered with). In stroke survivors, simple or routine movements, such as reaching or grasping,

can be regarded as complex given that individuals with motor deficits may have difficulty

initiating and coordinating movements (Cirstea & Levin, 2000; Handley, Medcalf, Hellier, &

Dutta, 2009; Subramanian et al., 2010; Levin et al., 2015). As discussed in section 2.4.1.2 (Motor

learning), the FP network is suggested to integrate feedback (Dosenbach et al., 2007) about

movement accuracy that can be used to update and/or enhance subsequent performance on the

motor task (Albert et al., 2009; Kim et al., 2015). Furthermore, the FP network may use feedback

from task performance to learn compensatory techniques to aid in task completion. Taken

together, the coupling between motor and FP networks may be important to perform a sequence

of movements after stroke.

Alternatively, Motor-FP connectivity may represent a relationship between movement and

cognition. Specifically, individuals with higher Motor-FP connectivity may recruit the FP

network more effectively to provide cognitive resources (e.g., attention, working memory) that

assist in task performance (Dosenbach et al., 2007; Seeley et al., 2007). In healthy individuals,

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motor and cognitive brain regions (e.g., M1, premotor cortex, DLPFC) are required to quickly

update motor plans and movements in response to changing motor task goals (e.g., different

target locations) (Rounis, Yarrow, & Rothwell, 2007; Jamadar et al., 2010). Furthermore, greater

cognitive load (as defined by dual- or multi-tasking paradigms in which participants perform a

motor task and simultaneously perform other irrelevant tasks) has been shown to reduce motor

performance in both healthy individuals (Au & Keir, 2007; Guillery Mouraux, & Thonnard,

2013) and those with stroke (Dennis et al., 2011). Behaviourally, individuals with better

cognitive status following their stroke have less arm impairment (Burke et al., 2014; Mullick et

al., 2015) and show better performance on activities of daily living (Heruti et al., 2002; Leśniak,

Bak, Czepiel, Seniów, & Członkowska, 2008). Given that the FP network is implicated in

various cognitive processes (as discussed in subsection 2.4.1 (Frontoparietal network implicated

in cognition)), the FP network may help provide cognitive resources to improve motor

performance, perhaps through better concentration and anticipation of movements. It is

important to note that this interpretation involving the motor-cognitive relationship is not

mutually exclusive from the first (i.e., motor learning) interpretation, as cognitive processes (e.g.,

attention, memory) are also required for learning (in general). Thus, both interpretations can be

equally valid and may depend on whether the FP network has a more prominent motor-role (for

motor learning) or a more prominent cognitive-role (to provide cognitive resources, such as

attention, decision making, or response inhibition).

In addition to our primary interpretations, an alternative explanation for our results is that

individuals with high Motor-FP connectivity may be imagining their movements in preparation

to perform a motor task. A few recent studies (Sharma, Baron, & Rowe, 2009; Hétu et al., 2013;

Pilgramm et al., 2016; Zhang et al., 2016) have found that both the motor and FP networks are

involved in motor imagery. Furthermore, damage to the FP network from stroke has been shown

to cause deficits in the ability for individuals to imagine their movements (Oostra, Van Bladel,

Vanhoonacker, & Vingerhoets, 2016). Motor imagery has been suggested to be an effective

intervention to enhance movement after stroke (Stevens & Stoykov, 2003; Sharma et al., 2006;

Dodakian, Campbell Stewart, & Cramer 2014). It is hypothesized that motor imagery enables

individuals to place greater focus on their movements (e.g., understanding why certain actions

are important) and to improve their ability to plan movements prior to actual performance

(Hanakawa, Dimyan, & Hallett, 2008). Thus, individuals with greater Motor-FP connectivity

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may employ greater use of motor imagery, which subsequently improves the process of motor

execution.

Another interpretation of our Motor-FP connectivity results may involve a distinction between

“domain-general” versus “domain-specific” networks. Specifically, the FP network can be

classified as a “domain-general network” since it is implicated in various (cognitive) processes,

such as attention (Seeley et al., 2007; Ptak 2012), language production (Geranmayeh et al., 2014;

Zhu et al., 2014), working memory (Linden, 2007; Seeley et al., 2007; Khader et al., 2016), and

task-switching (Dove et al., 2000; Sohn et al., 2000; Rubia et al., 2001; Li et al., 2015). Cole and

colleagues (2013) suggest that domain-general networks, such as the FP network, are “flexible”

because its pattern of neural activity can be altered in real-time (when tasks are novel or difficult)

to closely match the pattern of neural activity for “domain-specific networks”, defined as

networks that are implicated in specific tasks, such as the motor network implicated in

movement. It is thought that domain-general networks may act as a ‘supervisor’ to monitor and

assist the domain-specific networks such that tasks involving the domain specific network can be

performed more effectively (Cole et al., 2013). Thus, the ability for the FP network to closely

match its neural activity with the motor network may help individuals to better learn, plan, and

execute their movements (Cole et al., 2013). In stroke, an individual whose FP network is more

flexible not only would show similar patterns of neural activity between the motor and FP

networks, but the FP network may assist the motor network (whose functions may be

compromised due to damage to the motor system) to enhance motor performance. It is important

to note that this interpretation is more mechanistic in nature. Specifically, this interpretation can

explain why the motor and FP networks would show neural coupling, but the benefit of this

coupling still rests on some aspect of motor learning, planning or cognition. As a result, this

interpretation may not be entirely exclusive from the aforementioned interpretations.

Lastly, the additional analyses involving the correlation between Motor-FP connectivity with the

CMSA-Arm and Hand stage were not significant, following correction for multiple comparisons

[Figure 5-1]. Nonetheless, a similar trend involving a positive association between Motor-FP

connectivity and each of the motor assessments is found. This suggests that the relationship

between the motor and FP networks is not necessarily specific to performance on the ARAT, but

that these results similarly apply to measures of arm and hand impairment. Thus, the motor and

FP networks may be important to enhance the collective aspects of motor outcome after stroke.

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Figure 5-1: Inter-network connectivity results (non-significant)

Inter-network results that did not meet the threshold set for statistical significance in this study. Scatterplots of the

residuals for the inter-network connectivity and behavioural assessment score, after controlling for age, lesion

volume, and years of education, are shown. The inter-network connectivity between the motor and FP networks

(Motor-FP connectivity) with Chedoke-McMaster Stroke Assessment Stage of Arm (CMSA-Arm) (A), Chedoke-

McMaster Stroke Assessment Stage of Hand (CMSA-Hand) (D), and Trail Making Test (TMT) Proportion Score

(G). The inter-network connectivity between the motor and visual networks (Motor-Visual connectivity) with

CMSA-Arm (B), CMSA-Hand (E), and TMT Proportion Score (H). The inter-network connectivity between the

motor and executive control (Motor-Exec connectivity) with CMSA-Arm (C), CMSA-Hand (F), and TMT

Proportion Score (I).

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2.2 Potential confounds

In our partial correlation between Motor-FP connectivity and the ARAT score, we accounted for

three covariates: age, lesion volume, and years of education. In particular, age (Roski et al.,

2013) and years of education (Marques, Soares, Magalhães R, Santos, & Sousa, 2015) have been

shown to greatly affect the connectivity of resting state networks. The raw correlation between

Motor-FP connectivity and ARAT was not significant (rs(25) = 0.14; p = 0.49). We found a

significant correlation, however, when accounting for the three aforementioned covariates in our

partial correlation between Motor-FP connectivity and ARAT (rs(25) = 0.58; p < 0.01).

However, we cannot be certain whether a single covariate is primarily suppressing the

relationship between Motor-FP connectivity and ARAT. Thus, an additional analysis was

performed comparing the partial correlation between Motor-FP connectivity and ARAT, with

only a single covariate accounted for in the correlation. The correlations between Motor-FP

connectivity and ARAT, after accounting for only a single covariate of age (rs(24) = 0.19; p =

0.35), lesion volume (rs(24) = 0.32; p = 0.12), or years of education (rs(24) = 0.28; p = 0.17) were

not significant [Figure 5-2]. These results suggest that there does not appear to be one covariate

in particular (i.e., age, lesion volume, or years of education) that may be significantly

suppressing the relationship between Motor-FP connectivity and ARAT. Instead, it appears that a

combined effect of the covariates may be involved in suppressing the relationship between

Motor-FP connectivity and ARAT.

In our study, we used the Williams’ T2 test statistic to show that the correlation between Motor-

FP connectivity and the ARAT score is significantly higher than the two control conditions: 1)

Motor-Visual connectivity with ARAT; and 2) Motor-Exec connectivity with ARAT. However,

we cannot rule out the possibility that the Motor-Visual or Motor-Exec connectivity is

influencing the significant correlation between Motor-FP connectivity and ARAT. Thus, an

additional analysis was performed by accounting for the Motor-Visual or Motor-Exec

connectivity as an additional covariate in our partial correlation between Motor-FP connectivity

and ARAT. The correlation between Motor-FP connectivity and ARAT remains significant, even

after accounting for Motor-Visual connectivity (rs(22) = 0.56; p < 0.01) or Motor-Exec

connectivity (rs(22) = 0.50; p = 0.02) [Figure 5-3]. These results further suggest that the

relationship between Motor-FP connectivity and the ARAT score appears to be specific to these

two networks.

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Figure 5-2: Motor-FP connectivity with ARAT (accounting for individual covariates)

(A) Raw Spearman’s correlation between Motor-FP connectivity and ARAT. (B) Scatterplot of the residuals for the

Spearman’s correlation between Motor-FP connectivity and ARAT, while accounting for age, lesion volume, and

years of education. Scatterplot of the residuals for the Spearman’s correlation between Motor-FP connectivity and

ARAT, while accounting for age (C), lesion volume (D), or years of education (E). Asterisks represent significant

correlation.

Figure 5-3: Motor-FP connectivity with ARAT (accounting for inter-network connectivity)

Scatterplot of the residuals for the Spearman’s correlation between Motor-FP connectivity and ARAT, while

accounting for Motor-Visual connectivity (A) or Motor-Exec connectivity (B).

2.3 Anomalous cases

In the context of our correlation between Motor-FP connectivity with ARAT, an outlier generally

refers to either a case with low Motor-FP connectivity but high ARAT score (or vice versa). The

partial regression plot between Motor-FP connectivity with ARAT contained two anomalous

data points, but importantly, these cases were not outliers [Figure 5-4, panel A]. Specifically,

these two data points have the largest residuals (i.e., lowest Motor-FP connectivity) relative to

the rest of the data. However, a statistical analysis of these data points using Weisberg’s t-

statistic and Cook’s distance (Stevens, 1984) [Appendix 7-5] suggests these two cases do not

appear to be outliers and do not appear to be the most influential points in our correlation

between Motor-FP connectivity and the ARAT score.

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Figure 5-4: Anomalous cases for inter-network connectivity correlation

(A) Scatterplot of the residuals for the Spearman’s correlation for the inter-network connectivity between the motor

and FP networks (Motor-FP connectivity) with the Action Research Arm Test (ARAT), after accounting for age,

lesion volume, and years of education. Two anomalous cases have been marked on the scatterplot (referred to as

‘green-circled case’ and ‘red-circled case’ in this figure). The lesion mask (in blue) for the green-circled case (B)

and red-circled case (C) is overlaid on a lesion map for all twenty-seven participants in the study. All lesions are

transformed to standard (Montreal Neurological Institute (MNI)) space.

There does not appear to be one prominent factor that can explain these two anomalous data

points. Specifically, the covariates (i.e., age, lesion volume, and years of education) we included

in our partial Spearman’s correlation for these two cases are not extreme values relative to the

rest of the data. Furthermore, the lesion location alone does not seem sufficient to fully explain

the low Motor-FP connectivity seen for these two cases. This is because twelve other participants

have similar lesion locations as what is found for these two anomalous cases [Figure 5-4, panels

B & C]. The Motor-FP connectivity values for participants who also had similar lesion locations

as these two cases ranged from 0.5 to 0.9, which is greater than the median Motor-FP

connectivity value in this data set. Taken together, a combination of factors may have influenced

the low Motor-FP connectivity value observed for these two anomalous cases.

There is a possibility that the Motor-FP connectivity at baseline may be lower in some

individuals not because of any underlying pathology, but could be a result of their genetic make-

up (Glahn et al., 2009) and/or life experiences, such as stress levels (Soares et al., 2013) or social

support (Pillemer, Holtzer, & Blumen, 2016). Although a significant association is found

between Motor-FP connectivity with the ARAT score, correlation does not equal causation.

Given that our study is cross-sectional and not a prospective one, we are not aware of the Motor-

FP connectivity prior to stroke onset for each participant. As a result, we cannot determine

whether the Motor-FP connectivity we found for these anomalous cases are below, at, or above

the Motor-FP connectivity at baseline (i.e., before stroke onset). Furthermore, our life

experiences can indirectly affect the connectivity within and between networks (Sporns, 2011).

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For example, less social support has been found to be related with lower connectivity in the

motor and FP networks (Pillemer et al., 2016). In particular, it has been suggested that

individuals with less social support have greater age-related decline (Pillemer et al., 2016), which

may lead to dysfunctional or disconnected networks (Sala-Llonch, Bartrés-Faz, & Junqué, 2015).

Thus, our study only focuses on one aspect that may influence motor outcome, but in reality

there are many factors that need to be considered when interpreting these results.

Collectively, these two cases provide a reminder of the complexities that surround clinical

research. As discussed in section 3.1 (Relevance for stroke severity and rehabilitation),

neuroimaging measures alone cannot provide a complete interpretation of the stroke survivor and

their motor deficit (Stinear, 2010; Arsava 2012; Burke & Cramer, 2013; Burke Quinlan et al.,

2015; Rehme, Volz, Feis, Eickhoff, Fink, & Grefkes, 2015; Ward, 2015; Wu et al., 2015). Thus,

it is important that we integrate information from various sources (including neuroimaging,

clinical behaviour, and life history, among other factors) to not only better understand the motor

deficit itself, but also the individual.

3 Intra-network connectivity

For the intra-network analyses, we are interested in the neural changes to areas not damaged by

the lesion. Thus, the location of the lesion is not the primary concern, but rather the main focus is

how the neural activity of these non-damaged brain regions within the motor and FP networks

are subsequently affected. Although the clusters from the intra-network analyses are reported in

the left hemisphere, a contributing factor to these results may be related to the fact we decided to

display the lesions in all participants on the right hemisphere to better generalize our findings.

Thus, our findings may not necessarily be specific to the left hemisphere per se, but the same

results may also be found if we displayed all lesions on the left hemisphere and performed our

analyses on the right hemisphere instead. As a result, the interpretations of our findings (in the

section below) are not specific to a single hemisphere, but can apply to either hemisphere.

Nonetheless, we do not expect the fact we displayed all lesions to the same hemisphere to

significantly impact our results, given that most of the RSNs are bilateral (Beckmann et al.,

2005).

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3.1 Frontoparietal network

We found that individuals with higher rs-connectivity between DLPFC and mid-VLPFC have

less hand impairment relative to those with lower DLPFC-mid-VLPFC rs-connectivity. We

suggest that rs-connectivity between DLPFC and mid-VLPFC may be involved in motor

learning, with the retrieval and reconsolidation of motor skills. Based on the working memory

model by Petrides (1996; 2002), the mid-VLPFC is implicated in the active retrieval of

information (Petrides, 1996; 2002). Active retrieval is a process whereby information about a

specific stimulus or context is recalled among competing alternatives (i.e., the recall does not

easily trigger a memory trace) (Petrides, 2002). I speculate that individuals use active retrieval to

recall their previous (movement) experiences that are relevant for the current situation, such that

the appropriate response can be determined. A motor task, such as to reach and grasp a spatula

on the table, can be performed in numerous ways (Bernstein, 1967). For example, an individual

can extend their arm, and then extend their fingers to grasp the spatula without moving their

trunk (Fujii, Lulic, & Chen, 2016). Alternatively, an individual can flex their trunk forward and

extend their fingers to grasp the spatula without extending their arm (Fujii et al., 2016). The fact

that many movement patterns exist to perform a single motor task suggests that the process of

active retrieval may also be important for individuals to select the appropriate movement pattern

from competing alternatives (Hummel, Andres, Altenmüller, Dichgans, & Gerloff, 2002). In the

case of stroke, when an individual receives an instruction to reach and grasp a spatula, the mid-

VLPFC may help to retrieve the movement pattern from their last successful attempt and inhibit

the movement patterns that were unsuccessful in achieving the motor task. Thus, the movement

pattern retrieved from a successful attempt can help inform the individual of the appropriate

movements they previously used that can be applied to the current task.

The DLPFC is thought to be important in monitoring performance to help correct and anticipate

movements (MacDonald et al., 2000; Petrides, 2000; Jamadar et al., 2010). I speculate that when

the appropriate movement pattern is selected (via the mid-VLPFC), the DLPFC will hold this

movement pattern in working memory such that the same movements can be applied to the

current motor task (Petrides, 1995). Interestingly, the DLPFC also has anatomical connections to

the SMA and premotor cortex (Koski & Paus, 2000; Ridderinkhoff, van den Wildenberg,

Segalowitz, & Carter, 2004) which suggests that information of the movement pattern held in

working memory by the DLPFC may be transferred to the SMA and premotor cortex to develop

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motor plans in preparation for action. In the case of our spatula example, the DLPFC may hold

the movement pattern that was selected from the mid-VLPFC and transmit this information to

the SMA and premotor cortex to develop a motor plan that resembles the successful movement

pattern used previously. Furthermore, the DLPFC may help to monitor performance by

comparing the movement pattern that was previously learned with current movement execution,

and if necessary, update the movement pattern based on the current motor experience. Thus, the

ability to successfully perform the movement using a movement pattern that was learned

previously enables the reconsolidation of the motor skill. Taken together, the mid-VLPFC and

DLPFC may be important to retrieve, apply, and reconsolidate the motor skills for a given task.

Alternatively, individuals with high rs-connectivity between DLPFC and mid-VLPFC may be

more capable in adjusting or adapting their movements. An attentional model proposed by

Mitchell (2011) suggests the DLPFC and mid-VLPFC may be important to adapt to novel or

dynamic situations. In particular, Mitchell (2011) suggests the mid-VLPFC is primarily involved

in modulating the relationship between the task goal and action (i.e., stimulus-response

relationship). A change in the environment, such as a different end target location, while an

action is being executed, may require the mid-VLPFC to quickly inhibit movement, re-assess the

stimulus-response relationship, and then determine the proper course of action. When the mid-

VLPFC has modulated the stimulus-response relationship, Mitchell (2011) hypothesizes the

DLPFC is implicated in (re)-focusing attention to place greater emphasis on relevant

information, such as stimulus features or prior experiences, that would assist in task completion.

This model appears to be highly applicable in real-life situations, given that our surrounding

environment is constantly changing to some degree (Ravizza & Carter, 2008). In stroke,

individuals who can better adapt to different conditions and focus on the relevant information

will likely select and execute the proper actions for task performance. This interpretation may

not be mutually exclusive from the motor learning interpretation since prior motor experiences

may be retrieved to help adapt current performance.

Interestingly, the mid-VLPFC and DLPFC are thought to be important for task-switching (Badre

& Wagner, 2007; Jamadar et al., 2010) in setting the task goal and monitoring performance

(Rubinstein et al., 2001; Badre & Wagner, 2007). In our study, however, the rs-connectivity

between the mid-VLPFC and DLPFC did not correlate with task-switching performance. One

reason for why we did not find a relationship with task-switching performance could relate to the

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type of paradigm that was used. Although the Trail Making Test (TMT) may be a sensitive

assessment to detect problems in cognitive function, it is not an ideal assessment to assess task-

switching given that many other cognitive processes, such as attention and working memory, are

also implicated in the performance of the TMT (Gaudino, Geisler, & Squires, 1995; Crowe,

1998; Stuss et al., 2001; Oosterman et al., 2010; Cepeda, Blackwell, & Munakata, 2013). Given

that TMT performance is often measured as the total time to complete the assessment, this value

can broadly determine whether cognitive function (in general) is ‘abnormal’. However, it does

not clearly determine which cognitive function(s) specifically contribute to ‘abnormal’

performance. The TMT will be further discussed in subsection 4.2 (Limitations).

3.2 Motor network

From this study, we found that individuals with greater rs-connectivity between M1 and SMA

have less hand impairment and better motor function than those with lower M1-SMA rs-

connectivity. This result is in line with previous literature that has found the coupling between

M1 and SMA is associated with better motor outcome following stroke (Grefkes et al., 2008;

Park et al., 2011; Rehme et al., 2011; Favre et al., 2014). We suggest that stroke survivors with

greater rs-connectivity between M1 and SMA are possibly using more motor planning to assist in

movement selection and execution. The SMA is involved in planning and temporal sequencing

of movements (Tanji & Shima, 1994; Gerloff et al., 1997; Shima & Tanji, 1998). Given that the

SMA is often recruited prior to movement execution, it is thought that the SMA is important to

set the movement trajectory and develop the proper/optimal order of movements that can be used

to inform action execution (Nachev, Kennard, & Husain, 2008). The motor plans developed by

the SMA may also involve information on the kinematics (e.g., speed) and kinetics (e.g., force)

of movement (Picard & Strick, 2003; Padoa-Schioppa, Li, & Bizzi, 2004). These results are also

consistent with our discussion in section 2.3 (Movement in healthy individuals), involving the

motor control model by Shadmehr and Krakauer (2008). Specifically, their model recognizes that

the SMA is one region important for motor planning that enables individuals to fine-tune their

movements such that performance can be accurate and precise. Taken together, stroke survivors

who have greater coupling between the M1 and SMA during movement are possibly more

organized with their actions since they can better prepare and anticipate the required movements

for task performance.

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4 Study strengths and limitations

4.1 Strengths

One of the strengths in this thesis involves the use of clinical assessment scores, as opposed to

performance on behavioural paradigms, to correlate with neuroimaging measures. Many

previous studies that examined the neural relationship between motor and FP regions and motor

outcome after stroke used an experimental paradigm, such as a finger tapping task (Ward et al.,

2003; Puh et al., 2007; Stewart et al., 2016). Importantly, performance on these paradigms may

not always be indicative of performance on clinical assessments. Thus, the findings from my

thesis can potentially be better understood within a clinical perspective given that the degree of

rs-connectivity was correlated with performance on specific motor assessments. Furthermore, an

interesting component of my thesis was the inclusion of assessments for motor impairment and

activity. Many previous studies only use a single motor assessment that either measures motor

impairment (Park et al., 2011; Yin et al., 2012; Chen & Schlaug, 2013) or function (Carter et al.,

2010). In rehabilitation, however, important distinctions are made between “impairment” and

“function” (World Health Organization, 2002; Levin et al., 2009). Therefore, it is important to

determine whether differences in rs-connectivity would be associated with impairment, function,

or both since it can provide insight on the motor recovery pattern (i.e., restore or compensate

motor ability). In this study, the intra-network and inter-network findings were similar between

the motor impairment and function measures, prior to corrections for multiple comparisons. This

suggests that motor and FP networks are not necessarily limited to an individual aspect of motor

ability (e.g., impairment or function), but instead appear to be involved in the collective aspects

of motor ability (e.g., impairment and function).

The use of two different approaches to analyze the motor and FP networks in relation to motor

outcome is also one of the strengths in this thesis. Overall, I use a hypothesis-driven approach for

my thesis to determine the specific networks (i.e., motor and FP) that warrant investigation. For

the intra-network analysis, however, a data-driven approach is used for the group-level FEAT

analyses to determine which regions within the motor or FP networks that had its rs-connectivity

with the seed modulated by performance on motor or task-switching assessments. This approach

is useful to determine all the regions within the network – as opposed to limiting our analyses to

specific brain regions within a single network – that have its rs-connectivity with the seed

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modulated by behavioural performance. Although a whole-brain approach is certainly feasible,

we decided to restrict our intra-network analyses within the motor and FP networks since these

were the two networks of primary interest in our study. Thus, I believe a whole-brain approach is

beyond the scope of the study objectives and any results outside the motor and FP networks may

be difficult to interpret within the context of the a priori approach we have taken with regards to

the motor and FP networks involved in motor re-learning of stroke survivors. For the inter-

network analysis, our results add to the current literature (Park et al., 2011; Yin et al., 2012)

since we show that the relationship between motor and FP regions and motor outcome is not only

limited to M1-DLPFC rs-connectivity, but is also found between entire motor and FP networks.

As discussed in subsection 2.1 (Inter-network Connectivity between Motor and Frontoparietal

Networks) of this chapter, it is important to explore this relationship through a network

perspective given that movement is a complex process that involves the communication between

many motor and non-motor regions.

Lastly, one of the strengths in this study is the use of various methods to study motor deficits

post-stroke. In particular, three main methods were used in this study: 1) lesion analysis; 2) brain

imaging; and 3) behavioural assessment. The combination of all three methods enables us to

obtain a more ‘holistic’ understanding of our stroke population and their motor deficits.

Specifically, each method by itself has its limitations. For example, lesion analysis can provide

information on the critical brain regions to perform certain processes (Stuss & Alexander, 2007),

such as movement, however, it provides little information about how the lesioned areas function

together with the regions spared from damage (Rorden & Karnath, 2004). Brain imaging is

useful to understand how certain regions function (or couple together) in response to task

performance (or at rest) (Rorden & Karnath, 2004). However, a major weakness of brain

imaging is the difficulty to determine whether certain regions are critical in task performance and

their specific role(s) for the task (Rorden & Karnath, 2004). Lastly, behavioural assessments

provide important information about the behavioural deficits as a result of pathology, but little

information can be gleaned from the neural processes involved in behaviour. In essence, each

method individually has its weaknesses which limit our ability to make interpretations of our

results. Importantly, however, the advantage of our study is that we use multiple methods to

address the weaknesses of each method separately to obtain a better understanding of the neural

processes associated with post-stroke behaviour in our participants.

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4.2 Limitations

A limitation of this study was that we only used data at one time point. As a result, we are

limited in the interpretations that we can make about the motor and FP networks with motor

recovery. In the strictest sense, interpretations involving motor “recovery” cannot be made in

cross-sectional studies since recovery implies studying a change over time. Furthermore, a

limitation of this study was the fact that the sex distribution in our stroke population may not be

representative of the stroke population found worldwide. In particular, stroke incidence is 33%

higher in males as opposed to females (Appelros, Stegmayr, & Terént, 2009), whereas stroke

prevalence is approximately 15% higher in females as opposed to males (possibly due to the fact

that females typically have a longer life expectancy than males) (Reeves et al., 2008). In our

study, however, we included eighteen (66%) participants who were male and nine (33%)

participants who were female. Given that we are examining neural measures and motor

performance during the chronic stage, it may be more ideal if we had more females in our study.

However, we did control for sex distribution in our study when relevant. Specifically, we

included sex as a covariate in the GLM of our intra-network analyses. Furthermore, sex did not

correlate with our inter-network measures or behavioural performance scores, thus we did not

include sex as a covariate in our partial Spearman’s correlations for the inter-network analyses.

Another limitation of my thesis was that we did not find a relationship between any of our neural

measures and TMT performance. The FP network was related to motor outcome, which is

consistent with prior studies that suggest the FP network is implicated in motor learning

(Hikosaka et al., 2002; Albert et al., 2009; Kim et al., 2015). However, given the FP network did

not correlate with TMT-ps, we are not certain of the relationship between the FP network and

cognitive performance, as previously reported in other studies (Dove et al., 2000; Sohn et al.,

2000; Seeley et al., 2007; Hagen et al., 2014; Li et al., 2015).

One reason there may have not been a significant relationship between the FP network and

TMT-ps could be due to our analysis technique. As shown in Figure 5-5 (panel A), twenty-two

(81%) of our participants, had a TMT-ps value less than two. With very little spread in our data

set, it is difficult to interpolate relationships between TMT-ps performance and our connectivity

measures when performing a correlational analysis. An alternative approach may be to separate

our participants into two groups: 1) participants with ‘normal’ TMT-ps values who likely do not

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have cognitive problems as a result of stroke; and 2) participants with ‘abnormal’ TMT-ps values

who may potentially have cognitive problems as a result of stroke. In this thesis, for example, I

consider the TMT-ps measure of 1.4 as the critical point, such that a TMT-ps value less than 1.4

is an indication of ‘normal’ cognitive function whereas a TMT-ps value greater than 1.4 is a

potential indication of cognitive problems [Appendix 7-5]. Given these TMT-ps guidelines,

eleven of twenty-seven (i.e., 40%) participants have a TMT-ps value less than 1.4 and thus,

sixteen of twenty-seven (i.e., 60%) participants have a TMT-ps value greater than 1.4 [Figure 5-

5, panel A]. With relatively equal numbers in each subgroup, an analysis comparing the intra-

network and inter-network connectivity between the two subgroups may possibly be more

appropriate given the distribution of TMT-ps values in our stroke population.

Figure 5-5: Trail Making Test proportion score distribution and lesion location summary

(A) Stem and leaf plot depicting the distribution of participant performance for the Trail Making Test Proportion

score (TMT-ps). The number in brackets represents the total number of participants for a given stem. (B) A table

summarizing the lesion location for all participants in the study. Frontal lesions were further classified according to

the anatomical divisions of the frontal lobes (Petrides, 2005). The number of participants with a lesion that spans a

stated location is listed in the table. It is important to note that some participants would be counted in more than one

lesion location if their lesion spans more than a single region. The number in brackets represents the number of

participants with a lesion only in the stated region.

Furthermore, Stuss and colleagues (2001) showed that lesion location may influence TMT

performance. Specifically, individuals who were most impaired had lesions in the dorsolateral

frontal area while those who were less impaired had lesions in ventromedial or orbitofrontal

areas. Although lesion location would be important to examine, the number of participants in our

study may not be feasible to study the relationship between FP network and TMT performance in

relation to lesion location. Specifically, if we were to separate our participants based on lesion

location [Figure 5-5, panel B], we have few participants in the different lesion location (e.g.,

dorsolateral, inferior medial) and even fewer individuals with lesions localized to a single frontal

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region. Thus, it may be challenging to perform analyses with a small number of participants in

each of the lesion location subgroups. Lastly, our understanding of the relationship between the

FP network and task-switching (specifically TMT performance) is based on studies with healthy

participants (Dove et al., 2000; Sohn et al., 2000; Seeley et al., 2007; Hagen et al., 2014) (or

those with hypertension (Li et al., 2015)). Behaviourally, studies have reported that stroke

survivors show impaired performance on the TMT (Stuss et al., 2001; Kopp et al., 2015). To my

knowledge, however, there has been no prior study that examined FP network connectivity with

TMT-ps performance in stroke survivors. Thus, it is difficult to conclude whether the non-

significant relationship seen in our study between the FP network and TMT-ps is expected or

unexpected since the neural basis of TMT performance after stroke is not as well-studied as in

healthy individuals.

As mentioned in subsection 5.3.1 (Frontoparietal network), the TMT is a noisy measure to assess

task-switching performance. To my knowledge, the TMT Proportion Score (TMT-ps) – which

was used for this study – can be considered as the gold standard to assess task-switching

performance on the TMT (Corrigan & Hinkeldey, 1987; Stuss et al., 2001). However, the TMT-

ps may not be a truly sensitive measure for task-switching, given that performance could also be

influenced by other factors, such as reading ability (Crowe, 1998) which is required to

comprehend the array of numbers and letters on the test page. Alternative assessments for task-

switching, such as the Wisconsin Card Sorting Test (Anderson et al., 1991), may be useful if we

want to correlate our neural measures with performance on clinical assessments.

In addition to the TMT being a noisy measure, the demand placed on working memory processes

may influence TMT performance. Specifically, the TMT requires individuals to not only

remember the task-switching rule (i.e., alternate between number and letter sequencing), but to

also remember the number and letter they previously sequenced. This demonstrates that working

memory is required to know the subsequent number or letter that needs to be found on the page

(Gaudino, Geisler, & Squires, 1995; Crowe, 1998). As a result, task-switching performance may

be hindered over the course of the test since the working memory requirements accumulate from

the beginning (Crowe 1998).

To reduce the working memory demands encountered with the TMT, we can use a task-

switching paradigm (perhaps implemented on a computer) that measures reaction time to switch

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between two successive trials [Figure 5-6] (Dove et al., 2000; Sohn et al., 2000; Braver et al.,

2003; Badre & Wagner 2006; Shallice et al., 2008b). This approach only requires individuals to

remember the task-switching rule since each trial is independent of each other. Therefore,

working memory is relatively constant across the experiment since individuals are required to

only focus on the current task. As a result, performance on these paradigms is likely more

representative of task-switching. Taken together, the inability to calculate a relatively ‘pure’

measure of task-switching using the TMT may have led to a null finding between the FP network

and task-switching performance.

Figure 5-6: Task-switching paradigm measuring the switch cost between successive trials

An example of a task-switching paradigm in which a cue is provided (i.e., “NUMBER” or “LETTER”) and the

participant is then required to press the left or right button, based on the cue that was given. It is expected that a

participant who is given different cues on two successive trials (e.g., “NUMBER” and “LETTER”) would produce a

switch cost. This paradigm is an example of a ‘focused approach’ since the switch cost is determined based on the

difference in reaction time between two successive trials (e.g., Trial 1 and 2). Thus, each trial is independent of the

other trials since the participant is not required to remember their previous response. Image ideas adapted from

Badre and Wagner (2006).

It can also be argued that task-switching paradigms can be classified as ‘cognitive-based’

(Allport, Styles, & Hsieh, 1994; Rogers & Monsell, 1995; Aron, Monsell, Sahakian, & Robbins,

2004; Shallice et al., 2008b) or ‘motor-based’ (Serrien et al., 2007; Serrien, 2009; Tallet et al.,

2009). The TMT can be considered as a cognitive-based paradigm since participants switch

between sequencing abstract concepts, such as letters and numbers. In contrast, a motor-based

task-switching paradigm may involve switching hands during a finger tapping task (Serrien et

al., 2007; Serrien, 2009; Tallet et al., 2009). Although both types of paradigms are considered

“task-switching”, it is possible that different processes are required for each type (Badre &

Wagner, 2007; Serrien et al., 2007). Previous studies have shown that the motor network showed

increased coupling when participants switched hands while finger tapping. Thus, future studies

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may consider exploring the intra-network connectivity of the FP network and the Motor-FP

connectivity with performance on a motor-based task-switching paradigm.

Another limitation involves the lack of variability across participant scores on the CMSA-Arm.

As seen on the stem and leaf plot in Figure 5-7 (panel A), fourteen of the twenty-seven

participants scored a stage 3 on the CMSA-Arm. Given that the CMSA-Arm stage is the same

for more than half of the participants, the use of a correlational analysis may not be sensitive to

show whether differences in rs-connectivity are associated with the level of arm impairment.

This is likely one reason there were no significant relationships between our intra-network or

inter-network connectivity measures and CMSA-Arm stage. In particular, the intra-network

analyses for the motor and FP networks with CMSA-Arm stage show a similar pattern of

findings (to our results reported in Figure 4-3) when viewed at lower thresholds [Figure 5-8,

panels A & B]. This suggests that a similar relationship involving the motor and FP intra-

network connectivity with CMSA-Arm stage is likely present, and may also be significant if we

had a more equal distribution of our participants in the other CMSA-Arm stages. Taken together,

interpolation from a correlational analysis can become more difficult when a majority of the data

points cluster in one area (i.e., at a single CMSA-Arm stage) since the line-of-best-fit will be

largely influenced by the minority of data points elsewhere in the scatterplot.

In contrast, the CMSA-Hand and ARAT have a more variable distribution of scores [Figure 5-7,

panels B & C], which may allow for better interpolation when using a correlational analysis.

This is because we can determine whether differences in hand impairment or motor function are

associated with differences in rs-connectivity. It is important to note, however, that the

significant relationship between FP intra-network connectivity and CMSA-Hand stage (reported

in Figure 4-3) was not significant for the ARAT. However, the relationship between the FP

intra-network connectivity and the ARAT showed a similar pattern of findings when viewed at

lower thresholds [Figure 5-8, panel C]. This suggests that a similar relationship involving the FP

intra-network connectivity and ARAT is likely present, even if the relationship may not be as

strong as the significant results with CMSA-Hand stage.

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Figure 5-7: Stem and leaf plots of motor assessment scores

Stem and leaf plots depicting the distribution of behavioural scores in participants for the (A) Chedoke-McMaster

Stroke Assessment Stage of Arm (CMSA-Arm), (B) Chedoke-McMaster Stroke Assessment Stage of Hand (CMSA-

Hand), and (C) Action Research Arm test (ARAT). The number in brackets represents the total number of

participants for a given stem.

Figure 5-8: Intra-network connectivity results (non-significant)

Intra-network results that did not meet the threshold set for statistical significance in this study. For illustration

purposes, voxels with z >2.5 are shown. (A) The rs-connectivity between the left primary motor cortex (seed) with

midline supplementary motor area (SMA) was not significantly modulated by performance on Chedoke-McMaster

Stroke Assessment Stage of Arm (CMSA-Arm). The rs-connectivity between the left dorsolateral prefrontal cortex

(seed) with left Brodmann Area (BA) 45a (mid-ventrolateral prefrontal cortex (mid-VLPFC)) was not significantly

modulated by performance on the CMSA-Arm (B) or the Action Research Arm Test (C).

Lastly, a general limitation not necessarily specific to my thesis, but applies more generally to

the field of neuroimaging analyses involves the method I used to create the seed masks for this

study. Specifically, the seed masks created in standard (Montreal Neurological Institute (MNI))

space were required to be transformed to functional space for use in each participant. As a result,

the location of the seed mask in functional space may correspond to a similar – but not the same

– region as what was determined in standard space. This can be interpreted more of a limitation

with the imaging analysis software rather than a limitation of the study design itself.

Nonetheless, one suggestion to possibly improve seed localization in functional space is to have

participants perform a simple fMRI paradigm (e.g., finger tapping) which is expected to elicit a

BOLD response in the region(s) of interest (e.g., M1). Thus, we can derive a seed mask directly

in functional space given that the brain regions activated during the simple fMRI paradigm are

specific to each participant. Furthermore, the proposed method is a way to verify the accuracy of

the transformation matrix used to transform the seed mask from standard to functional space

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since an overlap between the seed mask (in functional space) and the activated regions would

suggest a relatively accurate transformation matrix.

5 Study implications

The results from my thesis suggest that the coupling between the motor and FP networks may be

associated with better motor outcome after stroke. As a result, our study offers three main

implications: 1) to inform clinicians on the importance of using a holistic approach in motor

rehabilitation; 2) to provide potential targets for therapeutic interventions, such as brain

stimulation; and 3) to better understand the mechanism(s) that underlie behavioural interventions

for motor recovery that apply a learning component.

From a short-term perspective, this study suggests the importance of using a holistic approach in

motor rehabilitation. Currently, interventions for motor rehabilitation primarily focus on the use

of simple motor tasks performed in repetition to re-learn movements (Page, 2003; Takeuchi &

Izumi, 2013). This suggests that motor deficits are primarily viewed as a motor issue that can

improve with the practice of movements. However, the results from this study demonstrate that

movement post-stroke also involves non-motor regions (and specifically the FP network). Thus,

interventions that focus on non-motor aspects, such as cognitive-motor training (e.g., motor

imagery) which implicates the FP network (Sharma et al., 2006), may also be used in

conjunction with traditional motor rehabilitation to help improve motor performance in stroke

survivors.

In the long-term, the motor and FP networks may represent potential targets for therapeutic

interventions. In particular, interventions involving brain stimulation techniques, such as

repetitive transcranial magnetic stimulation (rTMS) (Pascual-Leone, Walsh, & Rothwell, 2000)

or transcranial direct-current stimulation (tDCS) (Filmer, Dux, & Mattingley, 2014), can be

applied to both motor and FP regions to possibly enhance motor recovery. Importantly,

stimulation of one region may influence the entire network associated with that region. Thus,

rTMS and tDCS applied to both the M1 and DLPFC may not only enhance the coupling within

the motor and FP networks, respectively, but the coupling between these two networks may be

increased as well. Given that our results demonstrate that individuals with greater coupling

between the motor and FP networks have better motor outcome, brain stimulation applied to both

networks may help improve movement after stroke. Nonetheless, future research can test the

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validity of this implication and determine the target locations that yield the best results after

stimulation.

Furthermore, a better understanding of the relationship between motor and FP networks for

motor outcome may help to better understand the effectiveness of current behavioural

interventions that apply learning strategies for motor recovery, such as Cognitive Orientation to

Daily Occupational Performance (CO-OP) (McEwen et al., 2015) or motor imagery (Sharma et

al., 2006). In CO-OP, for example, individuals are required to make guided discoveries in their

approach to perform a (motor) task (McEwen et al., 2015). Therefore, I speculate the following

events may occur. Prior to CO-OP, the Motor-FP connectivity may be low in individuals with

stroke and thus, task performance is not successful. During CO-OP, guidance from the clinician

may help to strengthen the Motor-FP connectivity such that greater FP network recruitment and

hence, more feedback about task accuracy (Albert et al., 2009; Kim et al., 2015), can improve

performance. After CO-OP, the Motor-FP connectivity is considerably stronger than before the

intervention which enables individuals to apply their learning and CO-OP training to novel tasks.

In essence, a better understanding of the neural mechanisms by which these behavioural

interventions may operate can help to stimulate research in the development of strategies that

stimulate the FP network to possibly enhance motor recovery after stroke.

6 Future directions

Despite finding a relationship between the motor and FP networks, future studies are required to

replicate findings and test the interpretations suggested in this thesis. For example, the

application of effective connectivity (Friston, 2011) or graph theory (Bullmore & Sporns, 2009)

may help to better understand the relationship between motor and FP networks and motor

outcome. Briefly, effective connectivity can provide information on how two brain regions may

influence each other by determining the direction of the rs-connectivity between two regions

(Friston, 2011). Alternatively, graph theory can provide information on the network

characteristics, such as the hub or connector (Bullmore & Sporns, 2009). Hubs are major regions

within a network and connectors are regions that link two networks together. Network

characteristics can help to determine the critical regions that underlie the relationship between

the motor and FP networks.

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Furthermore, future studies may consider exploring the change in coupling between the motor

and FP networks before and after an intervention for motor rehabilitation. This may help us

better understand the significance of Motor-FP network coupling in motor recovery after stroke.

Given that the data used in this thesis is part of a larger clinical trial, it is quite feasible to

perform a future study that measures the change in Motor-FP network coupling before and after

an intervention (i.e., music-supported rehabilitation). In this scenario, I hypothesize that stroke

survivors who show greater behavioural improvements in motor ability post-intervention would

also show greater Motor-FP network coupling than stroke survivors who show less (or no)

improvements in motor ability post-intervention.

Although the primary interpretation of our results in this thesis was in the context of motor re-

learning in stroke survivors, it is important for future studies to test the validity of these

interpretations. The ability to examine changes, if any, between the motor and FP networks after

rehabilitation may be due to motor re-learning (Albert et al., 2009; Kim et al, 2015), but can also

be, in part, explained by a ‘ripple’ or experience-dependent effect (Stevens, Buckner, Schacter,

2010). The ‘ripple effect’ suggests that brain regions recently activated during a simple task,

such as button pressing (a simple task that does not require much learning) (Tung et al., 2013),

can subsequently modulate the neural activity at rest in networks that involve the same brain

regions previously activated for the task (Stevens & Spreng, 2014). This suggests that the effect

of learning a complex movement or simply repeating a task that implicates both motor and FP

networks (e.g., motor imagery (Sharma et al., 2009; Oostra et al., 2016)) may both lead to

changes in network connectivity (and perhaps motor performance). The ability to tease apart and

test the influence of these two interpretations may eventually have important implications on the

interventions and/or strategies for motor rehabilitation. Taken together, the findings from my

thesis can hopefully stimulate further research to explore the motor and FP network relationship

in stroke survivors with motor deficits.

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Chapter 6 Conclusion

Motor outcome after stroke not only involves the integrity of the motor system, but may also

involve the integrity of the non-motor (i.e., frontoparietal) regions. In my thesis, three major

results are found: 1) individuals with higher rs-connectivity between the motor and FP networks

have better motor function than those with lower Motor-FP connectivity; 2) individuals with

higher rs-connectivity between DLPFC and mid-VLPFC have less hand impairment than those

with lower DLPFC-mid-VLPFC rs-connectivity; and 3) individuals with higher rs-connectivity

between M1 and SMA have less hand impairment and better motor function than those with

lower M1-SMA rs-connectivity. These results suggest that the rs-connectivity within and

between the motor and FP networks may, in part, be related to better motor outcome. In essence,

the results from my thesis demonstrate that motor deficits may involve other factors (i.e.,

networks) beyond the motor system and that the coupling between motor and FP networks may

represent one important component to enhance movement after stroke.

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Appendices

Appendix 7-1: Peak Coordinates Averaged for Left Primary Motor Cortex (M1) Seed

Based on Studies with an Arm/Elbow or Hand/Finger Paradigm

Supplementary Table IA: Arm/Elbow Paradigm

First Author (Year) Journal Paradigm x y z

Alkadhi (2002) Am J Neuroradiol Elbow Movement -29 -25 61

Lotze (2000) Neuroreport Elbow Movement -28 -24 64

Average Coordinates -28 -24 62 All peak coordinates are from healthy participants.

Supplementary Table IB: Hand/Finger Paradigm

First Author (Year) Journal Paradigm x y z

Adam (2003) Cogn Brain Res Finger Key Press -34 -14 62

Alkadhi (2002) Am J Neuroradiol Hand Movement &

Finger Movement

-36.5 -21 58

Baraldi (1999) Neurosci Lett Finger Movement -31 -15 51

Bischoff-Grethe (2002) J Neurosci Button Press -30 -28 42

Calhoun (2002) Hum Brain Mapp Hand Driving -33 -13 60

Choi (2001) Exp Brain Res Hand Gestures

Culham (2003) Exp Brain Res Grasp vs. Reach -29 -18 56

Cunnington (2002) Neuroimage Finger Press -41 -17 60

De Weerd (2003) Neuroimage Hand Tapping -42 -17 49

Debaere (2001) Neuroimage Wrist

Flexion/Extension

-40.5 -24 64.5

Dhamala (2003) Neuroimage Rhythmic Finger

Tapping

-36 -28 64

Dreher (2002) Eur J Neurosci Button Press -28 -16 60

Ehrsson (2000) J Neurophysiol Precision &

Power Grip

-34 -20 56

Ehrsson (2001) J Neurophysiol Grip -36 -20 48

Ehrsson (2003) J Neurophysiol Finger Grip -40 -36 60

Foltys (2003) Neuroimage Hand Clenching -33 -29 56

Hamzei (2002) Exp Brain Res Writing -24 -16 54

Hamzei (2002) Neuroimage Pinch Grip -42 -12 58

Haslinger (2002) Cogn Brain Res Finger Movement -42 -19 56

Indovina (2001) Exp Brain Res Button Press -38 -20 68

Indovina (2001) Neuroimage Finger Movement -34.4 -26.4 57.5

Ino (2003) Neurosci Res Clock Drawing -34 -12 56

Jancke (2000) Cogn Brain Res Finger Tapping -49 -20 49

Jantzen (2002) Neurosci Lett Finger Flexion -33.5 -17 57

Johansen-Berg (2002) Exp Brain Res Button Pressing -28 -8 54

Kawashima (2000) J Neurophsyiol Visually Cued Finger

Movement

-34 -18 60

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Kobayashi (2003) Neuroimage Finger Movement -40.8 -17.2 57.4

Koski (2002) Cereb Cortex Finger Movement -40 -24 58

Kuhtz-Buschbeck (2001) Eur J Neurosci Natural Grip -40 -24 52

Liddle (2001) Hum Brain Mapp Finger Press -38 -26 65

Lotze (2000) Neuroreport Finger Tap -40 -16 56

Lotze (2003) Brain Voluntary Wrist

Movement

-38 -20 58

Matsuo (2003) Cogn Brain Res Finger Movement -38 -18 58

Mattay (1998) Psychiatry Res:

Neuroimaging Sect

Thumb Opposition -36 -22 68

Mayville (2002) Hum Brain Mapp Pinch -39 -28 56

Muller (2002) Cogn Brain Res Finger Tapping -33 -21 60

Rao (1997) J Neurosci Finger Tapping -35 -24 55

Riecker (2003) Neuroimage Finger Tapping -45 -24 60

Rotte (2002) Stereotact Funct Neurosurg Finger Movement -35 -18 59

Rowe (2002) Brain Finger Tapping -50 -28 48

Sakai (2000) J Neurosci Button Press -36 -16 46

Schubotz (2001) Cereb Cortex Finger Tapping -35 -19 61

Stippich (2002) Neurosci Lett Hand Movement -37.14 -24.5 55.21

Stoeckel (2003) Neuroimage Hand Movement -44 -17 43

Sugio (2003) Neuroreport Grasp -32 -20.5 53.5

Toma (2003) Neurosci Lett Button Press -44 -15 50

Toni (1998) Neuroimage Finger Movements -40 -18 64

Toni (2002) J Cogn Neurosci Finger Press -26 -22 66

Vaillancourt (2003) J Neurophysiol Grip -15 -16 63

Watanabe (2002) Neuroimage Finger Press -32 -8 62

Winterer (2002) Neuroimage Button Press -35 -26 50

Average Coordinates -36 -20 56 All peak coordinates are from healthy participants.

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Appendix 7-2: Peak Coordinates Averaged for Left DLPFC Seed Based on Studies with a

Task-switching Paradigm

First Author (Year) Journal Paradigm x y z

Braver (2003) Neuron Word Switching -46 15 21

Cools (2004) J Neurosci Color Switching -48 24 21

Dreher (2003) Cereb Cortex Letter Switching -52 12 36

Luks (2002) Neuroimage Number Switching -38 31 23.5

Ruff (2001) Neuroimage Color-Word

Switching

-44 22 24

Smith (2004) Hum Brain Mapp Shape-Position

Switching

-28 47 17

Average Coordinates -43 25 24 All peak coordinates are from healthy participants.

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Appendix 7-3: Peak Coordinates Averaged for Left Primary Visual Cortex (V1) Seed

Based on Studies with a Flashing Checkerboard Paradigm

First Author (Year) Journal Paradigm x y z

Di Russo (2002) Hum Brain Mapp Circular

Checkerboard

-4 -81 5

Kim (2011) Cereb Cortex Checkerboard

Wedge

-7.2 -92.8 4.3

Miki (2001) Ophthalmic Res Varying Check Size -4 -90 25

Moradi (2003) Neuroimage Varying Presentation

Regions

-8.45 -85.9 1.35

Wan (2006) Neuroimage Varying Frequency

and Contrast

-7.6 -92.8 3.2

Average Coordinates -6 -88 8 *PubMed Search used the following keywords: “visual cortex”, “flashing checkerboard”, “checkerboard”, “fmri”,

and “human”. All peak coordinates are from healthy participants.

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Appendix 7-4: Peak Coordinates Averaged for Left Dorsal Anterior Cingulate Cortex

(dorsal ACC) Seed Based on Studies with a Stroop Task

First Author (Year) Journal Paradigm x y z

Coderre (2008) Brain Lang Word Stroop -6.5 41 3.5

de Zubicaray (2001) Hum Brain Mapp Word Stroop -4 42 -4

Heckers (2004) Am J Psychiatry Number Stroop 0 18 46

Leung (2000) Cereb Cortex Word Stroop -6 23 38

Milham (2001) Cogn Brain Res Word Stroop 0 10 44

Milham (2005) Hum Brain Mapp Word Stroop -4 14 48

Average Coordinates -3 25 29 All peak coordinates are from healthy participants.

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Appendix 7-5: Statistical equations

Statistic Equation Critical value

(A) Trail Making Test

proportion score 𝑇𝑀𝑇𝑝𝑠 =

(𝑇𝑀𝑇4 − 𝑇𝑀𝑇2)

𝑇𝑀𝑇2 > 1.4

(B) Williams’ T2 test

𝑇2 = (𝑟𝑗𝑘 − 𝑟𝑗ℎ)√(𝑁 − 1)(1 + 𝑟𝑘ℎ)

2 (𝑁 − 1𝑁 − 3

) |𝑅| + 𝑟2(1 − 𝑟𝑘ℎ)3 > 1.71

(C) Weisberg’s t statistic

𝑡𝑖 = 𝑟𝑖√𝑛 − 𝑝′ − 1

𝑛 − 𝑝′ − 𝑟𝑖2 < 3.56

(D) Cook’s Distance (CDi) 𝐶𝐷𝑖 =

(�̂� − �̂�(−𝑖))′𝑋′𝑋(�̂� − �̂�(−𝑖))

(𝑝 + 1)𝑀𝑆𝑟𝑒𝑠 < 1

Statistical equations used for this thesis.

(A) The Trail Making Test (TMT) proportion score was used to assess task-switching performance (based on

completion times for number sequencing (TMT condition #2 (TMT-2)) and number-letter switching (TMT condition

#4 (TMT-4)). The critical value is based on TMT-2 and TMT-4 completion times (obtained from the Delis-Kaplan

Executive Function System Manual) for an average 60-year old. The critical value was chosen for this age group

since the average age of the participants in this study is approximately 60 years. An individual who has a TMT-ps

value greater than 1.4 may have some degree of cognitive impairment.

(B) The Williams’ T2 test was used to determine whether two dependent correlation coefficients are significantly

different from each other. For this study, a T2 value greater than 1.71 suggests the correlation coefficients between

the two dependent conditions are significantly different.

(C) The Weisberg’s t statistic was used to determine whether the residual for an individual case is an outlier. For this

study, a ti value less than 3.56 suggests an individual case is not a significant outlier.

(D) Cook’s Distance (CDi) was used to determine influential cases in the data set. A CDi value less than (1) suggests

an individual case is not an influential data point.

Page 128: Exploring the Relationship between Motor and ... · Exploring the Relationship between Motor and Frontoparietal Brain ... FMRIB Oxford Centre for Functional MRI of the Brain FNIRT

11

3

Ap

pen

dix

7-6

: D

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Ab

bre

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tion

s: C

MS

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tag

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23

71.1

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20

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63.6

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3

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0.5

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0.6

40

54.9

17

F

4.1

67

20

7.9

44

22

3

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0

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49

0.5

23

0.0

18

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80

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17

M

11.5

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17.1

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23

2

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2

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29

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0.2

91

0.0

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3

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26

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66.5

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21.9

17

16

401.6

24

25

4

4

5

5

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42

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72

0.5

20

75.3

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5.3

33

12

9.5

84

26

4

5

4

9

1.7

84

0.9

00

0.5

41

0.5

58

58.4

17

M

3.9

17

19

28.0

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27

3

2

1

1

0.8

57

0.3

38

0.3

58

0.0

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59.5

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M

1.8

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16

7.8

96