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ESSENTIAL KNOWLEDGE 3.B.1: Gene regulation results in differential gene expression, leading to cell specialization.

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Essential knowledge 3.B.1:. Gene regulation results in differential gene expression, leading to cell specialization. Both DNA regulatory sequences, regulatory genes, and small regulatory RNAs are involved in gene expression. - PowerPoint PPT Presentation

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Page 2: Essential knowledge 3.B.1:

BOTH DNA REGULATORY SEQUENCES, REGULATORY GENES, AND SMALL REGULATORY RNAS ARE INVOLVED IN GENE EXPRESSION.

Regulatory sequences are stretches of DNA that interact with regulatory proteins to control transcription.

• Promoters• Terminators• Enhancers A regulatory gene is a sequence of DNA

encoding a regulatory protein or RNA. Find the regulator gene on the next

slide. What does it do?

Page 3: Essential knowledge 3.B.1:

Fig. 18-3

Polypeptide subunits that make up

enzymes for tryptophan synthesis

(b) Tryptophan present, repressor active, operon off

Tryptophan(corepressor)

(a) Tryptophan absent, repressor inactive, operon on

No RNA made

Activerepressor

mRNA

Protein

DNA

DNA

mRNA 5

Protein

Inactiverepressor

RNApolymerase

Regulatorygene

Promoter

Promoter

trp operonGenes of operon

Operator Stop

codonStart codonmRN

A

trpA

5

3

trpR trpE trpD

trpC trpB

ABCDE

Page 4: Essential knowledge 3.B.1:

BOTH POSITIVE AND NEGATIVE CONTROL MECHANISMS REGULATE GENE EXPRESSION IN BACTERIA AND VIRUSES.

The expression of specific genes can be turned on by the presence of an inducer.

The expression of specific genes can be inhibited by the presence of a repressor.

Inducers and repressors are small molecules that interact with regulatory proteins and/or regulatory sequences

Regulatory proteins inhibit gene expression by binding to DNA and blocking transcription (negative control).

Regulatory proteins stimulate gene expression by binding to DNA and stimulating transcription (positive control) or binding to repressors to inactivate repressor function.

Certain genes are continuously expressed; that is, they are always turned “on,” e.g., the ribosomal genes.

Page 5: Essential knowledge 3.B.1:

Fig. 18-3

Polypeptide subunits that make up

enzymes for tryptophan synthesis

(b) Tryptophan present, repressor active, operon off

Tryptophan(corepressor)

(a) Tryptophan absent, repressor inactive, operon on

No RNA made

Activerepressor

mRNA

Protein

DNA

DNA

mRNA 5

Protein

Inactiverepressor

RNApolymerase

Regulatorygene

Promoter

Promoter

trp operonGenes of operon

Operator Stop

codonStart codonmRN

A

trpA

5

3

trpR trpE trpD

trpC trpB

ABCDE

Is this negative or positive control?

Page 6: Essential knowledge 3.B.1:

Fig. 18-4a

(a) Lactose absent, repressor active, operon off

DNA

Protein

Activerepressor

RNApolymerase

Regulatorygene

Promoter Operat

or

mRNA 5

3

NoRNAmade

lacI

lacZ

Is this positive or negative control?

Page 8: Essential knowledge 3.B.1:

IN EUKARYOTES, GENE EXPRESSION IS COMPLEX AND CONTROL INVOLVES REGULATORY GENES, REGULATORY ELEMENTS AND TRANSCRIPTION FACTORS THAT ACT IN CONCERT.1. Transcription factors bind to specific

DNA sequences and/or other regulatory proteins.

2. Some of these transcription factors are activators (increase expression), while others are repressors (decrease expression).

3. The combination of transcription factors binding to the regulatory regions at any one time determines how much, if any, of the gene product will be produced.

Page 9: Essential knowledge 3.B.1:

Fig. 18-9-3

Enhancer

TATAbox

PromoterActivator

sDNA

Gene

Distal control

element

Group ofmediator

proteins

DNA-bending

protein

Generaltranscripti

onfactors

RNApolymerase

II

RNApolymerase

II

Transcriptioninitiation

complexRNA

synthesis

Page 11: Essential knowledge 3.B.1:

Gene regulation accounts for some of the phenotypic differences between organisms with similar genes.

Page 12: Essential knowledge 3.B.1:

ESSENTIAL KNOWLEDGE

3.B.2:A variety of intercellular and intracellular signal transmissions mediate

gene expression

Page 13: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES GENE EXPRESSION Cytokines

regulate gene expression to allow for cell replication and division.

Page 14: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES GENE EXPRESSION Mating pheromones in

yeast trigger mating gene expression.

Two haploid yeast of opposite mating types secrete pheromones, grow projections and mate.

Page 16: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES GENE EXPRESSION Seed germination and gibberellin Gibberellins (GAs) are plant hormones

that regulate growth and influence various developmental processes, including stem elongation, and germination

Page 17: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES CELL FUNCTION.Ex 1: HOX genes and their role in

development. Hox genes are a group of related genes

that control the body plan of the embryo along the anterior-posterior (head-tail) axis.

Page 18: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES CELL FUNCTION. Ex 2: P53 is a tumor suppressor

protein p53 is crucial in multicellular

organisms, where it regulates the cell cycle and, thus, functions as a tumor suppressor that is involved in preventing cancer.

As such, p53 has been described as "the guardian of the genome because of its role in conserving stability by preventing genome mutation

Page 19: Essential knowledge 3.B.1:

SIGNAL TRANSMISSION WITHIN AND BETWEEN CELLS MEDIATES CELL FUNCTION. Morphogenesis “shape” and beginnign--is

the biological process that causes an organism to develop its shape

Example 3: morphogen is a substance governing the pattern of tissue development in the process of morphogenesis, and the positions of the various specialized cell types within a tissue.

More precisely, a morphogen is a signaling molecule that acts directly on cells to produce specific cellular responses depending on its local concentration.