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The Insight Journal
Luis IbáñezKITWARE, Inc.
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NAMIC and
The Insight Journal
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NAMIC Software Process
Algorithm Developer
SoftwareEngineer
Insight Journal Paper
Programming Week
Phone / IMCollaboration
Subversion/CVSSandbox
Bottomless Pit ofUseless Research
ITK / VTKSlicer
Wiki ProjectPage
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The Insight Journal
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In Traditional Journals…
What You See
is What You Get
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In fact…
That is the ONLY
thing you get
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Last time we tried to share
image data in a Journal…
We were told, that the
only file formats they
could distribute were:
PowerPoint, Word and Excel…
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First we laughed…
Then we cried
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Does somebody here
has a Floppy ?
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Does somebody here
has a USB Key ?
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Intellectual
Property
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OPEN
ACCESS
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Success Story
C. R. Maurer, Jr., R. Qi, and V. Raghavan
"A Linear Time Algorithm for Computing Exact Euclidean Distance Transforms of Binary Images in Arbitrary Dimensions“
IEEE - Transactions on Pattern Analysis and Machine Intelligence
25(2): 265-270, 2003
2002-2003
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Success Story
2006
– University of Iowa
– Hans Johnson & Vamsi Jammalamadaka
– Atlas-Based Segmentation
– Bottle neck: Distance map computation
– Future work: try Maurer’s published method
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Success Story
February 17 2006
9:26 email about new Insight Journal submission
12:30 print and read documentation while
12:45 download source code, replace method in their
application and compile it
13:00 run on one dataset
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Success Story
February 17 2006
13:03 curse because it could not have possible
be computed in only 3 minutes
13:10 Compare with previous results: Do dance of joy
because new results are nearly the same as the old ones
16:00 Write an Insight Journal review
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40 minutes of IJ
has more impact than
3 years of IEEE-PAMI
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The Insight Journal
Technical work must be reproducible
Papers should be publicly accessible
Fully Electronic publishing
Not limited to ITK
Brought to you by ISC
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The Insight Journal
Reproducibility requires sharing
– Source code
– Images
– Parameters
Open source
– Existing algorithms provide services
– New algorithms should be made available to others
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Image Processing Method
AlgorithmInput
Image(s)
Parameters
OutputImage(s)
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Submission for the IJ
Code
InputData
JournalRepository
WebSite
ResultsData
Author
BuildMachines
PDF doc
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Insight JournalManager
Author
SubmitsProject
DSpace
StoresProject
AutomaticTesting
Environment
PostsResults
Dashboard
SubmitsEntry
Reviewer
ReviewsProject
Process Flow
SendsCode
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Benefits of the Insight Journal Allows sharing your Source Code
– Faster and larger impact on the community
Immediate feedback from Readers and Reviewers
– Open Dialog / Forum
No Limitations
– No page limitations
– No limit or charges for color figures
– Accepting additional electronic material
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Benefits of the Insight Journal Indexed by Google
Post revisions of papers and code
Richer readers experience
– Source code available
– Original parameters and images available
– Reader can try on their own data
Accepts practical contributions
– complimentary to full Journal Papers
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Benefits of the Insight Journal No Time Constraints
– Continuous submission process
– Continuous peer-review
– Continuous submission of revision (paper/code)
Thanks to not using Paper !
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http://www.Insight-Journal.org
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• Comparison of output images
• Publicly available
• Tests for non-trivial images
• Reviewers and readers can use it as a first view of the paper.
Results Verification
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