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Realistic modelingthe cerebellar cortex
Sergio Solinas, Egidio D’AngeloUniversity of PaviaIRCCS C. Mondino
Alghero 13-15 May 2013
OPEN SOURCE BRAIN
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1958
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OSB website
“a lattice” 55 years later
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Parasagittal organizationGolgi cell axon
Barmack & Yakhnitsa J. Neurosci. 2008
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Parasagittal organizationMossy fiber branching
Wu et al. J. Comparative Neurology 1999
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Lattice arrangement
Pellionisz & Szentágothai Brain Research 1973
Purkinje celldendritic fields
Stellate cellaxonal field
Golgi cellaxonal field
Parallelfibers
Golgi celldendritic field
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Network picture from otto
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Convey channel:
Cerebral cortex
Sensory nuclei
Input of the cerebellar cortex
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Spot scale 200 µm
Center/ surround effect
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Parallelf fiber scale 2 mm: Lateral inhibition
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Collaborative developmentSheffield: tests and analysis proceduresAmrita: LFP reconstruction &
Multicompartmenteal GRC model
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Field Programmable Gate Array (FPGA)PhD Thesis Alessandra Majani
NEURON simulator
Hart beat discrimination
F1 engine monitor
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FPGA simulatorSingle compartment model of Cerebellar granule cell(D’Angelo et al. 2001, Solinas et al .2010)
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FPGA simulator
Architecture N° CELLs FPGA complexity Expandable
SOFTWARE 100 LOW YES
HARDWARE 1 300 LOW NO
HARDWARE 2 150 HIGH LIMITS
HARDWARE 3 2500-5000 MEAN YES
HARDWARE 4 50000-100000 MEAN LIMITS
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Neurophysiology Lab in PaviaBrain Connectivity Center IRCCS C. Mondino
Egidio D’AngeloFrancesca PrestoriLisa MapelliDaniela Gandolfi (Modena)Jonathan Mapelli (Modena)Francesca LocatelliLuigi CongiRamakrishnan K. B.Licia de ProprisMartina SgrittaMartina PaganiPaolo Pozzi
Jesus GarridoStefano MasoliSathyaa SubramaniyamTimoteo ColnaghiFulvia PalesiGloria CastellazziJessica MonacoStefano CasaliAlessandra MajaniIrene SolinasLeda Ruggeri