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UNIVERSITI PUTRA MALAYSIA BIOFLOC TECHNOLOGY SYSTEM FOR IMPROVEMENT OF THE SURVIVAL, GROWTH, BIOCHEMICAL COMPOSITION AND PHYSIOLOGY OF AFRICAN CATFISH (Clarias gariepinus BURCHELL 1822) JUVENILES DAUDA AKEEM BABATUNDE FP 2018 79

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Page 1: DAUDA AKEEM BABATUNDE - psasir.upm.edu.mypsasir.upm.edu.my/id/eprint/76180/1/FP 2018 79 IR.pdfphase at different carbon/nitrogen (C/N) ratios, 0, 10, 15 or 20. The growth performance

UNIVERSITI PUTRA MALAYSIA

BIOFLOC TECHNOLOGY SYSTEM FOR IMPROVEMENT OF THE SURVIVAL, GROWTH, BIOCHEMICAL COMPOSITION AND

PHYSIOLOGY OF AFRICAN CATFISH (Clarias gariepinus BURCHELL 1822) JUVENILES

DAUDA AKEEM BABATUNDE

FP 2018 79

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BIOFLOC TECHNOLOGY SYSTEM FOR IMPROVEMENT OF THE SURVIVAL, GROWTH, BIOCHEMICAL COMPOSITION AND

PHYSIOLOGY OF AFRICAN CATFISH (Clarias gariepinus BURCHELL 1822)JUVENILES

By

DAUDA AKEEM BABATUNDE

Thesis Submitted to the School of Graduate Studies, Universiti Putra Malaysia, inFulfilment of the Requirements for the Degree of Doctor of Philosophy

March 2018

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COPYRIGHT

All material contained within the thesis, including without limitation to text, logos, icons,

photographs and all other artwork, is copyright material of Universiti Putra Malaysia

unless otherwise stated. Use may be made of any material contained within the thesis for

non-commercial purposes from the copyright holder. Commercial use of material may

only be made with the express, prior, written permission of Universiti Putra Malaysia.

Copyright © Universiti Putra Malaysia

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DEDICATION

This thesis is dedicated to Almighty Allah (SWT)

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Abstract of thesis presented to the Senate of Universiti Putra Malaysia in fulfilment of

the requirement for the degree of Doctor of Philosophy

BIOFLOC TECHNOLOGY SYSTEM FOR IMPROVEMENT OF THE SURVIVAL, GROWTH, BIOCHEMICAL COMPOSITION AND

PHYSIOLOGY OF AFRICAN CATFISH (Clarias gariepinus BURCHELL 1822)JUVENILES

By

DAUDA AKEEM BABATUNDE

March 2018

Chairman: Nicholas Romano, PhD Faculty: Agriculture

Biofloc technology system (BFT) is an in situ low-cost water quality management

technique. It works on the principle of stimulating heterotrophic bacteria to convert the

toxic nitrogenous waste into potentially consumable biomass. This has been successfully

applied in shrimp and tilapia aquaculture. However there is little information on its

application on other commercially important species including African catfish, Clarias gariepinus. This study aimed at establishing the most appropriate conditions for the

nursery culture of C. gariepinus in a biofloc technology system. The study was

conducted in four phases. The first phase investigated the effects of three different carbon

sources with different characteristics, sucrose, glycerol and rice bran, on the biofloc

formation, water quality, growth and survival performance and physiological status of

the African catfish juveniles. There was no difference in growth or feeding efficiencies

parameters but survival, liver glycogen content and overall water quality parameters

were significantly higher in glycerol than other treatments. The use of rice bran led to

mass mortalities, likely due to stress associated with elevated nitrogenous waste and less

soluble rice bran acting as an irritant. Glycerol was further investigated in the second

phase at different carbon/nitrogen (C/N) ratios, 0, 10, 15 or 20. The growth performance

and overall health status of the African catfish were examined and subsequently, the fish

in the different treatments were challenged with Aeromonas hydrophila to investigate

their resistance to pathogenic bacteria. C/N ratio of 15 appears to be the best in the

management of ammonia-N. Although chymotrypsin activities and physiological

parameters were higher in all the BFT treatments than the control but growth

performance was not different among the treatments. Meanwhile, C/N ratios of 15 or 20

led to a significantly higher resistance to disease compared to C/N ratio of 10 or the

control. The third phase investigated the effects of feeding habit of cultured fish on the

growth performance in BFT. The previously established glycerol and C/N ratio of 15

was used in BFT for a more efficient filter-feeding fish, lemon fin barb hybrid (LFBH)

and African catfish, an inefficient filter feeder. The control system was a recirculating

aquaculture system (RAS). Fish feeding habit affected the nutritional value of biofloc

but not the biofloc formation. There was no difference in water quality between RAS and

BFT except for nitrate-N which was higher in RAS. BFT led to substantially improved

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growth and feeding efficiencies performance in LFBH but the growth and feeding

efficiencies in African catfish was only slightly higher in BFT than RAS. In the fourth

phase, African catfish was cultured in BFT with differently processed rice bran as carbon

sources. The rice bran was pretreated with a Bacillus sp. in either aerobic (cellular

respiration; ResRB) or anaerobic condition (fermentation; FerRB) while raw rice bran

(RRB) and RAS without carbon addition served as controls. The ammonia-N was

significantly lower in RAS and FerRB in the first two weeks. However, the FerRB led

to significantly improved growth and feeding efficiencies compared to the RAS or

ResRB. The use of BFT with glycerol as the carbon source at C/N of 15 led to improved

water quality management, and biochemical composition, physiological health status and

diseases resistance of C. gariepinus in intensive nursery culture. In addition to efficient

water quality management, FerRB led to improved growth and nutritional value of C. gariepinus juveniles in intensive nursery culture. The use of fermented rice bran is

therefore recommended in BFT to culture African catfish. Meanwhile, there is need for

further research on its optimum C/N ratio and the potentials to enhance the immunity

and disease resistance of the fish culture in the system.

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Abstrak tesis yang dikemukakan kepada Senat Universiti Putra Malaysia sebagai

memenuhi keperluan untuk Ijazah Doktor Falsafah

SISTEM TEKNOLOGI BIOFLOK UNTUK PENINGKATAN KEMANDIRIAN, PERTUMBUHAN, KOMPOSISI BIOKIMIA DAN FISIOLOGI JUVENIL IKAN

KELI AFRIKA (Clarias gariepinus BURCHELL 1822)

Oleh

DAUDA AKEEM BABATUNDE

Mac 2018

Pengerusi: Nicholas Romano, PhDFakulti: Pertanian

Sistem teknologi bioflok (BFT) adalah teknik pengurusan kualiti air kos rendah secara

in situ. Ia berfungsi melalui prinsip stimulasi bakteria heterotrofik yang menukar sisa

nitrogen toksik kepada biojisim yang boleh digunakan. Teknologi ini telah berjaya

diaplikasikan pada kultur udang dan tilapia. Walaubagaimanapun hanya terdapat sedikit

informasi mengenai aplikasinya pada spesies komersil yang lain termasuk ikan keli

Afrika, Clarias gariepinus. Kajian ini bertujuan untuk mewujudkan keadaan yang paling

sesuai untuk kultur asuhan Clarias gariepinus dalam sistem teknologi bioflok. Kajian ini

dijalankan dalam empat fasa. Fasa pertama mengkaji kesan tiga jenis sumber karbon

yang berbeza, sukrosa, gliserol dan dedak padi, pada pembentukan bioflok, kualiti air,

pertumbuhan, kelestarian dan status fisiologi juvenil ikan keli Afrika. Tiada perbezaan

antara pertumbuhan atau parameter kecekapan pemakanan walaupun kemandirian,

kandungan glikogen hati dan parameter kualiti air keseluruhan adalah secara signifikan

lebih tinggi dalam gliserol berbanding rawatan yang lain. Penggunaan dedak padi

membawa kepada mortaliti yang tinggi, kemungkinan kerana tekanan yang disebabkan

pertambahan keluaran buangan nitrogen dan kurang keterlarutan dedak padi yang

menyebabkan iritasi. Gliserol telah dikaji dengan lebih lanjut dalam fasa kedua pada

nisbah karbon/nitrogen (C/N) yang berbeza, 0,10,15,20. Kadar pertumbuhan dan status

kesihatan ikan keli Afrika secara keseluruhan diperiksa dan seterusnya ikan dalam

rawatan berbeza dicabar dengan Aeromonas hydrophila untuk mengkaji rintangan ikan

tersebut pada bakteria patogenik. Nisbah C/N 15 didapati paling terbaik dalam

pengurusan ammonia-N. Sementara itu, aktiviti kimotripsin dan parameter fisiologi

adalah lebih tinggi di dalam rawatan BFT berbanding kawalan walaupun prestasi

pertumbuhan tidak berbeza antara semua rawatan. Nisbah C/N 15 atau 20 membawa

kepada kerintangan penyakit yang lebih tinggi berbanding C/N 10 atau kawalan. Fasa

ketiga mengkaji kesan tabiat pemakanan terhadap pertumbuhan ikan yang dikultur dalam

BFT. Gliserol dan nisbah C/N 15 digunakan dalam BFT pada ikan jenis pemakan

menapis yang lebih efisien, kerai lampam (LFBH) dan ikan keli Afrika yang merupakan

ikan pemakan menapis tidak efisien. Sistem kawalan adalah sistem akuakultur kitar

semula (RAS). Tabiat pemakanan ikan mempengaruhi nilai nutrisi bioflok tetapi tidak

pembentukan bioflok. Tidak terdapat perbezaan antara kualiti air RAS dan BFT kecuali

nitrat-N yang lebih tinggi dalam RAS. BFT memberikan pertumbuhan yang lebih baik

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dan kecekapan pemakanan yang signifikan di LFBH tetapi BFT hanya memberikan

sedikit sahaja peningkatan pertumbuhan dan kecekakapan makanan berbanding RAS.

Dalam fasa keempat, ikan keli Afrika dikultur dalam BFT dengan dedak padi yang

diproses secara berbeza sebagai sumber karbon. Dedak padi tersebut telah dipra-rawat

dengan Bacillus sp. samada secara aerobik (respirasi selular; ResRB) atau kondisi

anaerobik (fermentasi; FerRB) manakala dedak padi mentah (RRB) dan RAS tanpa

penambahan karbon bertindak sebagai kawalan. Kandungan ammonia-N dalam RAS dan

FerRB adalah rendah secara signifikan pada dua minggu pertama. Walaubagaimanapun,

FerRB telah membawa kepada pertumbuhan dan kecekapan makanan yang ketara lebih

baik berbanding kawalan ResRB. Penggunaan BFT menggunakan gliserol sebagai

sumber karbon pada nisbah C/N 15 telah meningkatkan pengurusan kualiti air, dan

komposisi biokimia, status kesihatan fisiologi dan kerintangan penyakit dalam kultur

nurseri intensif C. gariepinus. Penggunaan FerRB bukan sahaja meningkatkan

pengurusan kualiti air yang efisien tetapi juga pertumbuhan dan nilai nutrisi yang lebih

baik pada juvenil C. gariepinus dalam kultur intensif asuhan. Dengan itu, penggunaan

dedak padi yang telah difermentasi adalah dicadangkan dalam sistem BFT bagi ikan keli

Afrika. Penyelidikan lanjut diperlukan untuk menentukan nisbah C/N yang optimum dan

keupayaan dedak padi yang difermentasi dalam mempertingkat imuniti dan ketahanan

penyakit ikan yang dikultur dalam sistem tersebut.

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ACKNOWLEDGEMENTS

All praises and adorations are due to Almighty Allah (SWT), for the journey so far. I

sincerely and dutifully appreciate the support, guidance and encouragement of the

chairman of my supervisory committee, Dr Nicholas Romano. My appreciation also goes

to all the members of my supervisory committee; Professor Mohd Salleh Kamarudin, Dr

Murni Marlina Abd Karim and Dr Natrah Fatin Mohd Ikhsan, for the guidance, attention

and support received.

I am indebted to Federal Government of Nigeria for provision of scholarship for my

study through her agency, Tertiary Education Trust Fund and to the management of

Federal University, Dutsin-ma Katsina State, Nigeria, for my nomination. I appreciate

every member of staff (teaching and non-teaching) and students of the Department of

Aquaculture, Universiti Putra Malaysia who has contributed in one way or the other to

ease my sojourn in Malaysia. Worthy of appreciation are members of Nigerian

community in UPM, for the support, guidance and encouragement received.

Special, thanks to my pioneer Head of Department and Dean of Agriculture Federal

University, Dutsin-Ma and now the Acting Vice Chancellor of the University, Professor

Armayau Hamisu Bichi, for the tutelage and support all the time. To my family members,

words cannot express my appreciation, especially to those who paid the price for my

long-term absence from home, my darling wife Princess Temitope Hauwa Oladigbolu-

Dauda and my Daughter Khadija Omotayo Dauda. I say a special thank you to my

parents for the support and prayers and to all my siblings and my in-laws. I am highly

indebted to the duo of Dr Ismail Olabisi Azeez and Mrs Morufat Bukola Wuraola-Tijani

for their tireless support.

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This thesis was submitted to the Senate of Universiti Putra Malaysia and has been

accepted as fulfillment of the requirements for the degree of Doctor of Philosophy. The

members of the Supervisory Committee were as follows:

Nicholas Romano, PhD Lecturer

Faculty of Agriculture

Universiti Putra Malaysia

(Chairman)

Mohd Salleh Kamarudin, PhD Professor

Faculty of Agriculture

Universiti Putra Malaysia

(Member)

Murni Marlina Abd Karim, PhD Senior Lecturer

Faculty of Agriculture

Universiti Putra Malaysia

(Member)

Natrah Fatin Mohd Ikhsan, PhD Senior Lecturer

Faculty of Agriculture

Universiti Putra Malaysia

(Member)

___________________________

ROBIAH BINTI YUNUS, PhD Professor and Dean

School of Graduate Studies

Universiti Putra Malaysia

Date:

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Declaration by graduate student

I hereby confirm that:

� This thesis is my original work;

� Quotations, illustrations and citations have been duly referenced;

� This thesis has not been submitted previously or concurrently for any other degree

at any other institution;

� Intellectual property from the thesis and copyright of thesis are fully owned by

Universiti Putra Malaysia (Research) Rules 2012;

� Written permission must be obtained from supervisor and the office of Deputy Vice-

chancellor (Research and Innovation) before thesis published (in the form of written,

printed or in electronic form) including books, journals, modules, proceedings,

popular writings, seminar papers, manuscripts, posters, reports, lecture notes,

learning modules, or any other material as stated in the Universiti Putra Malaysia

(Research) Rules 2012;

� There is no plagiarism or data falsification/fabrication in the thesis, and Scholarly

integrity is upheld as according to the Universiti Putra Malaysia (Graduate Studies)

Rules 2003 (Revision 2012-2013) and the Universiti Putra Malaysia (Research)

Rules 2012. The thesis has undergone plagiarism detection software.

Signature: ________________________ Date: _______________________

Name and Matric No.: Dauda Akeem Babatunde GS43994

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Declaration by Members of Supervisory Committee

This is to confirm that:

� The research conducted and the writing of this thesis was under our supervision,

� Supervision responsibilities as slated in Rule 41 in Rules 2003(Revision 2012-

2013) were adhered to.

committee: Dr Nicholas Romano

committee: Professor Dr Mohd Salleh Kamarudin

committee: Dr Murni Marlina Abd Karim

committee: Dr Natrah Fatin Mohd Ikhsan

Signature: _____________________

Name of

Chairman

of supervisory

Signature: _____________________

Name of

Member

of supervisory

Signature: _____________________

Name of

Member

of supervisory

Signature: _____________________

Name of

Member

of supervisory

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TABLE OF CONTENTS

Page

ABSTRACT i

ABSTRAK iii

ACKNOWLEDGEMENTS v

APPROVAL vi

DECLARATION vii

LIST OF TABLES xiv

LIST OF FIGURES xviii

LIST OF ABBREVIATIONS xxii

CHAPTER

1 GENERAL INTRODUCTION 1

1.1 Background to the study 1

1.2 Justification for the study 3

1.3 Research objectives 4

2 LITERATURE REVIEW 5

2.1 Global aquaculture production 5

2.1.1 African catfish aquaculture 6

2.1.2 African catfish aquaculture in Malaysia 7

2.1.3 African catfish aquaculture in Nigeria 9

2.1.4 Comparison between catfish aquaculture in Malaysia

And Nigeria 11

2.1.5 Future prospect of African catfish aquaculture in

Malaysia and Nigeria 11

2.2 Sustainable aquaculture development 12

2.3 History and development of biofloc technology system 13

2.4 Microbial interactions in biofloc technology system 14

2.4.1 Roles of different microbial interactions in BFT 15

2.4.2 Algae-bacteria interactions in BFT 16

2.4.3. Impact of microbial heterogeneity and processes on the

characteristics of the BFT tanks/ponds 17

2.5.1 Temperature 19

2.5.2 pH 19

2.5.3 Mixing intensity 20

2.5.4 Dissolved oxygen 20

2.5.5 Organic carbon sources 20

2.5.6 Carbon to nitrogen (C/N) ratios 22

2.6 Implications of BFT to disease and health management 25

2.7 Mechanism of enhancing physiological health status of 29

2.8 Effect of fish species on the growth performance of the

cultured 29

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3 DIFFERENT CARBON SOURCES AFFECT BIOFLOC COMPOSITIONS, WATER QUALITY, THE SURVIVAL ANDPHYSIOLOGY OF AFRICAN CATFISH (Clarias gariepinus) FINGERLINGS REARED IN INTENSIVE BIOFLOC TECHNOLOGY SYSTEM 31

3.1 Introduction 31

3.2 Materials and methods 32

3.2.1 Source of experimental animals, acclimation and

tank preparation 32

3.2.2 Experimental design 32

3.2.3 Analysis of the selected water quality paramters 34

3.2.4 Measurement of the biofloc volume, wet weight and

dry weight 35

3.2.5 Biofloc morphological structure, planktonic and

proximate composition 36

3.2.6 Measurements of fish growth, survival and

production parameters 37

3.2.7 Plasma biochemistry and body indices 38

3.2.8 Fatty acid composition, cholesterol and lipid

peroxidation 38

3.2.9 Liver histopathology and periodic-acid schiff 40

3.2.10 Statistical analysis 40

3.3 Results 41

3.3.1 Biofloc volume, wet weight and dry weight 41

3.3.2 Biofloc morphological structure and planktonic

composition 42

3.3.3 Proximate and fatty acid composition 44

3.3.4 Selected water quality parameters 46

3.3.5 Survival, growth performance, and production

parameters 46

3.3.6 Whole-body proximate composition, muscle

cholesterol, muscle lipid peroxidation and body

indices 49

3.3.7 Plasma biochemistry 49

3.3.8 Liver histology and periodic-acid schiff 49

3.4 Discussion 55

3.5 Conclusion 58

4 INFLUENCE OF CARBON/NITROGEN RATIO ON BIOFLOC PRODUCTION AND BIOCHEMICAL COMPOSITION AND SUBSEQUENT EFFECTS ON THE GROWTH, PHYSIOLOGICAL STATUS AND DISEASE RESISTANCE OF AFRICAN CATFISH (Clarias gariepinus) CULTURED IN GLYCEROL-BASED BIOFLOC SYSTEMS 59

4.1 Introduction 59

4.2 Materials and methods 60

4.2.1 Experimental animal and tank preparation 60

4.2.2 Experimental design 60

4.2.3 Water quality measurements 61

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4.2.4 Measurements of biofloc volume, wet weight and

biochemical 61

4.2.5 Measurements of fish growth, survival, feeding

efficiencies 61

4.2.6 Serum biochemistry, differential cell counts and

lysozyme activity 62

4.2.7 Liver histopathology and digestive enzyme activity 63

4.2.8 Challenge with Aeromonas hydrophila 64

4.2.9 Statistical analysis 64

4.3 Results 64

4.3.1 Biofloc formation 64

4.3.2 Proximate and fatty acid composition of the bioflocs 66

4.3.3 Water quality dynamics 66

4.3.4 Survival, growth and productivity parameters 67

4.3.5 Proximate composition, cholesterol and lipid

peroxidation of fish muscle 71

4.3.6 Serum biochemical parameters 71

4.3.7 Lysozyme assay and differential cell counts 75

4.3.8 Liver trypsin and chymotrypsin activity 75

4.3.9 Liver glycogen content 75

4.3.10 Bacterial challenge and histopathology 75

4.4 Discussion 76

4.4.1 Water quality and biofloc production/composition 76

4.4.2 Fish growth, biochemical composition and digestive

enzymes 81

4.4.3 Resistance to bacterial challenge 82

4.5 Conclusion 82

5 PERFORMANCE OF AFRICAN CATFISH (Clarias gariepinus) AND LEMON FIN BARB HYBRID (Hypsibarbus wetmorei × Barbynomus gonionotus) IN A GLYCEROL-BASED BIOFLOC TECHNOLOGY SYSTEM 84

5.1 Introduction 84

5.2 Materials and methods 86

5.2.1 Source of the experimental animals, acclimation and tank

preparation 86

5.2.2 Experimental design and procedure 87

5.2.3 Water quality measurement and total cultivable bacteria 88

5.2.4 Measurement of biofloc volume, mass and proximate

composition 88

5.2.5 Measurement of fish growth, production parameters

and proximate composition 88

5.2.6 Statistical analysis 89

5.3 Results 89

5.3.1 Biofloc formation and proximate composition 89

5.3.2 Water quality parameters and total viable bacteria

colony forming unit (CFU) count 89

5.3.3 Growth, production parameters and proximate

composition of the fish 95

5.4 Discussion 99

5.5 Conclusions 100

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6 FERMENTING RICE BRAN, A CARBON SOURCE FOR BIOFLOC TECHNOLOGY SYSTEM, IMPROVED THE GROWTH, FEEDING EFFICIENCIES AND BIOCHEMICAL COMPOSITION OF AFRICAN CATFISH (Clarias gariepinus) JUVENILES 101

6.1 Introduction 101

6.2 Materials and methods 102

6.2.1 Rice bran preparation and analysis 102

6.2.2 Source of experimental animal, acclimation and

tank preparation 103

6.2.3 Experimental design 104

6.2.4 Measurement of biofloc formation and proximate

composition 104

6.2.5 Water quality, microalgae and total bacterial colony

forming unit (CFU) count 104

6.2.6 Measurements of fish growth, survival, body indices

and production parameters 105

6.2.7 Plasma biochemical composition and liver

histopathological examination 105

6.2.8 Fish proximate composition 105

6.2.9 Statistical analysis 105

6.3 Results 105

6.3.1 Proximate composition and water solubility/water

absorption indices 105

6.3.2 Selected water quality parameters, microalgae and

total bacteria CFU counts 106

6.3.3 Biofloc formation and proximate composition 107

6.3.4 Growth, feeding efficiencies, production parameters

and whole-body fish proximate composition 113

6.3.5 Plasma biochemistry and liver histology 113

6.4 Discussion 118

6.5 Conclusions 119

7 GENERAL DISCUSSION AND CONCLUSION 120

7.1 General discussion 120

7.2 General conclusion 124

7.3 Recommendations for future research 124

REFERENCES 125

APPENDICES 139

BIODATA OF STUDENT 141

LIST OF PUBLICATIONS 142

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LIST OF TABLES

Table Page

2.1 Studies on the effect of different organic carbon sources on biofloc

characteristics, water quality, growth and

24

2.1 Studies on the effect of different organic carbon sources on biofloc

characteristics, water quality, growth and survival performance of

the cultured organisms

23

2.2 Studies on effect of different carbon to nitrogen (C/N) ratios on

biofloc composition, nutrient removal and growth and survival

performance of the cultured organism

27

2.3 Studies on physiological health status of organisms cultured in

biofloc technology system

28

3.1 Mean (±SE) total biofloc volume (mL L-1), biofloc wet weight (g L-

1) and biofloc dry weight (g L-1) collected from African catfish

Clarias gariepinus culture with different carbon sources (sucrose,

glycerol or rice bran) after 6 weeks of the experimental period

42

3.2 Proximate composition (% dry weight) and cholesterol content (μg mL-1) of the bioflocs collected from African catfish Clarias

gariepinus culture with different carbon sources (sucrose, glycerol or

rice bran) after 6 weeks of the experimental period

44

3.3 Fatty acid composition (%) of the bioflocs collected from African

catfish Clarias gariepinus culture with different carbon sources

(sucrose, glycerol or rice bran) after 6 weeks of the experimental

period

45

3.4 Mean (±SE) selected water quality parameters in African catfish

Clarias gariepinus culture biofloc technology system when using

different carbon sources (sucrose, glycerol or rice bran) for 6 weeks

of the experimental period

47

3.5 Mean (±SE) survival, growth and production parameters of African

catfish Clarias gariepinus juveniles after 6 weeks of culture in a

biofloc technology system using different carbon sources (sucrose,

glycerol or rice bran)

50

3.6 Mean (±SE) whole-body proximate composition (% wet weight),

muscle cholesterol (μg mL-1), HSI (%), VSI (%) and MDA (μM g-

1) of African catfish Clarias gariepinus juveniles after 6 weeks of

culture in a biofloc technology system with different carbon sources

(sucrose, glycerol or rice bran)

51

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3.7 Mean (±SE) plasma glucose (mmol L-1), cholesterol (mmol L-1)

(triglycerides (mmol L-1), mineral content (mmol L-1), alanine

aminotransferase (ALT, U L-1), aspartate aminotransferase (AST, U

L-1) in African catfish Clarias gariepinus juveniles after 6 weeks of

culture in a biofloc technology system with different carbon sources

(sucrose, glycerol or rice bran)

52

4.1 Mean (±SE) proximate composition (% dry weight), cholesterol

content (μg mL-1) and lipid peroxidation (μM L-1) of the bioflocs

produced in the glycerol-based biofloc systems for the culture of

Clarias gariepinus at different carbon/nitrogen ratios after six weeks

of the experimental trial

67

4.2 Mean (±SE) fatty acid composition (% of total fatty acids) of the

bioflocs produced in the glycerol-based biofloc systems for the

culture of Clarias gariepinus at increasing carbon/nitrogen ratio after

six weeks of the experimental trial

68

4.3 Mean (±SE) selected water quality parameters in African catfish

Clarias gariepinus reared in glycerol-based biofloc systems at

increasing carbon/nitrogen ratios after six weeks of experimental

trial

69

4.4 Mean (±SE) growth performance, survival and production

parameters of Clarias gariepinus juveniles reared in glycerol-based

biofloc systems at increasing carbon/nitrogen ratios after six weeks

of experimental trial

72

4.5 Mean (±SE) muscle proximate composition (% wet weight)

cholesterol content (μg mL-1) and lipid peroxidation (MDA) (μM g-

1) of Clarias gariepinus juveniles reared in the glycerol-based biofloc

system at different carbon/nitrogen ratio after six weeks of the

experimental trial

73

4.6 Mean (±SE) muscle fatty acid composition (% of fatty acids) of

Clarias gariepinus reared in the glycerol-based biofloc systems at

increasing carbon/nitrogen ratios after six weeks of the experimental

trial

74

4.7 Mean (±SE) plasma glucose (mmol L-1), cholesterol (mmol L-1),

triglycerides (mmol L-1), and mineral content (mmol L-1) in Clarias

gariepinus juveniles reared in the glycerol-based biofloc systems at

increasing carbon/nitrogen ratios after six weeks of the experimental

trial

75

4.8 Mean (±SE) serum lysozyme activities (LSZ; U mL-1), percentage

of red blood cells (RBC) and white blood cells (WBC), and

differential WBC counts (% of total WBC) in Clarias gariepinus

juveniles reared in the glycerol-based biofloc systems at increasing

carbon/nitrogen ratios after six weeks of the experimental trial

76

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5.1 Mean (±SE) total biofloc volume (mL L-1), biofloc wet weight (g L-

1) and biofloc dry weight (g L-1) collected from African catfish

Clarias gariepinus or lemon fin barb hybrid (LFBH) (Hypsibarbus

wetmorei × Barbynomus gonionotus) in a glycerol-based biofloc

technology system (BFT) during the 8-week experimental period

91

5.2 Proximate composition (% dry weight) of the bioflocs collected from

a glycerol-based biofloc technology system (BFT) with African

catfish (Clarias gariepinus) or lemon fin barb hybrid (LFBH)

(Hypsibarbus wetmorei × Barbynomus gonionotus) at Week 5 and 8

of the experimental period

92

5.3 Mean (±SE) selected water quality parameters in a glycerol-based

biofloc technology system (BFT) or recirculating aquaculture system

(RAS) used to culture African catfish (Clarias gariepinus) or lemon

fin barb hybrid (Hypsibarbus wetmorei × Barbynomus gonionotus)

juveniles over the 8-week experimental period

93

5.4 Mean (±SE) total viable bacterial colony forming units (log CFU

mL-1) in a glycerol-based biofloc technology system (BFT) or

recirculating aquaculture system (RAS) used to culture of African

catfish (Clarias gariepinus) or lemon fin barb hybrid (LFBH)

(Hypsibarbus wetmorei × Barbynomus gonionotus) juveniles after

Week 6, 7 and 8

96

5.5 Mean (±SE) growth and production parameters, survival and body

indices of African catfish (Clarias gariepinus) or lemon fin barb

hybrid (LFBH) (Hypsibarbus wetmorei × Barbynomus gonionotus)

juveniles after 8 weeks of culture in a glycerol-based biofloc

technology system (BFT) or recirculating aquaculture system (RAS)

97

5.6 Mean (±SE) whole body proximate composition (% wet weight), of

African catfish Clarias gariepinus or lemon fin barb hybrid (LFBH)

(Hypsibarbus wetmorei x Barbynomus gonionotus) juveniles after 8

weeks of culture in either glycerol-based biofloc technology system

(BFT) or recirculating aquaculture system (RAS)

98

6.1 Proximate composition (% as fed basis), total soluble sugars, water

solubility index and water absorption index of the differently

processed rice bran; raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB)

106

6.2 Mean (±SE) selected water quality parameters in biofloc technology

system (BFT) for rearing African catfish juveniles over a period of

six weeks with differently processed rice bran; raw rice bran (RRB),

rice bran treated with Bacillus sp. with (ResRB) and without aeration

(FerRB)

109

6.3 Mean (±SE) proximate composition of biofloc (% dry weight) from

African catfish-based biofloc technology system (BFT) with

differently processed rice bran; raw rice bran (RRB), rice bran

treated with Bacillus sp. with (ResRB) and without aeration (FerRB)

112

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6.4 Mean (±SE) growth production parameters of African catfish

juveniles reared in biofloc technology system (BFT) with differently

processed rice bran; raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB)

114

6.5 Mean (±SE) whole-body proximate composition (% wet weight) of

African catfish juveniles reared in biofloc technology system (BFT)

with differently processed rice bran; raw rice bran (RRB), rice bran

treated with Bacillus sp. with (ResRB) and without aeration (FerRB)

115

6.6 Mean (±SE) plasma glucose (mmol L-1), cholesterol (mmol L-1),

triglycerides (mmol L-1), bilirubin (mmol L-1) and mineral content

(mmol L-1) in African catfish juveniles reared in biofloc technology

system (BFT) with differently processed rice bran; raw rice bran

(RRB), rice bran treated with Bacillus sp. with (ResRB) and without

aeration (FerRB)

115

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LIST OF FIGURES

Figure Page

2.1 World capture fisheries and aquaculture production 5

2.2 African catfish (Clarias gariepinus Burchell 1822) juveniles 6

2.3 Global aquaculture production of Clarias gariepinus 7

2.4 Percentage contribution of major aquaculture species in Malaysia,

data sourced from Malaysia, annual fisheries statistics (DOF, 2016)

8

2.5 Aquaculture production of African catfish and red tilapia (hybrid) in

Malaysia between 1995 and 2015. Data obtained from Malaysia,

annual fisheries statistics (DOF, 2016)

8

2.6 Clarias gariepinus production in Malaysia in comparison with total

freshwater production and overall total aquaculture production

between 1995 and 2015. Data obtained from Malaysia, annual

fisheries statistics 1995-2015 (Department of Fisheries, Malaysia,

DOF, 2016).

9

2.7 Clarias gariepinus production in Nigeria, in comparison with total

aquaculture production, from 1995 to 2015. Data obtained from Food

and Agriculture organization (FAO, 2017) and Federal Department of

Fisheries (FDF), Nigeria (Anetekhai, 2013).

10

2.8 Comparison of African catfish production between Malaysia and

Nigeria in the last two decades. Data obtained from Malaysia,

Department of Fisheries (DOF, 2016), Food and Agricultural

organization statistics (FAO, 2017) and Federal Department of

Fisheries, Nigeria (FDF)(Anethekhai, 2013).

11

2.9 Biofloc technology concept 13

3.1 Experimental set up used for culturing of African catfish in biofloc

technology system with different carbon sources (sucrose, glycerol or

rice bran) and control with no addition of external carbon

33

3.1 Histological sections of the liver (PAS staining) from African catfish

Clarias garipenus juveniles after 6 weeks in the control or in biofloc

technology system with different carbon sources, i.e. sucrose, rice

bran (a) or glycerol (b) and control. There are less positive PAS

material (PM) in rice bran compared to other treatments.

54

3.2 Calculation of amount of carbon sources (sucrose, glycerol or rice

bran) to be added at carbon to nitrogen (C/N) ratio of 15 based on feed

with 43% crude protein used in the experiment

34

3.3 Mean (±SE) biofloc volume (mL L-1) in African catfish Clarias 41

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3.4 Biofloc colouration according to the carbon source type, two cones

for each samples from left to right, G- glycerol, S-Sucrose and R-rice

bran

42

3.6 Zooplankton composition of the bioflocs collected from African

catfish Clarias gariepinus culture with different carbon sources

(sucrose, glycerol or rice bran). Lecane and Lepadella are rotifers.

44

3.7 Mean (±SE) weekly ammonia-N concentrations (mg L-1) in African

catfish Clarias gariepinus culture when using different carbon sources

(sucrose, glycerol or rice bran) for 6 weeks of the experimental period

48

3.8 Mean (±SE) nitrite-N concentrations (mg L-1) in African catfish

Clarias gariepinus culture when using different carbon sources

(sucrose, glycerol or rice bran) for 6 weeks of the experimental period

48

3.9 Histological sections of the liver (H&E staining) from African catfish

Clarias gariepinus juveniles after 6 weeks of culture in biofloc

technology systems with different carbon sources; the rice bran (a)

showed hydrophic vacuolation (* asterisk) with some instances of

pyknotic nuclei (arrowhead) while other treatments glycerol, control

and sucrose (b) showed normal cell (NC ) with sinuisodal structure.

53

4.1 Weekly mean (±SE) biofloc volume (mL L-1) produced in the

glycerol-based biofloc systems for culture of Clarias gariepinus at

increasing carbon/nitrogen ratios during six weeks of the

experimental trial

65

4.2 Weekly mean (±SE) biofloc wet weight (g L-1) produced in the

glycerol-based biofloc systems for culture of Clarias gariepinus at

increasing carbon/nitrogen ratios during the six weeks of the

experimental trial

66

4.3 Weekly mean (±SE) ammonia-N concentration (mg L-1) in glycerol-

based biofloc systems for culture of Clarias gariepinus at increasing

carbon/nitrogen ratios during the six weeks of the experimental trial

70

4.4 Weekly mean (±SE) nitrite-N concentration (mg L-1) in the glycerol-

based biofloc systems for culture of Clarias gariepinus at increasing

carbon/nitrogen ratios during the six weeks of the experimental trial

70

4.5 Weekly mean (±SE) nitrate-N concentration (mg L-1) in the glycerol-

based biofloc systems for culture of Clarias gariepinus at increasing

carbon/nitrogen ratios during the six weeks of the experimental trial

71

4.6 Mean (±SE) liver trypsin activities (U mg protein-1) and

chymotrypsin (U mg protein-1) in Clarias gariepinus reared in

glycerol-based biofloc systems at increasing carbon/nitrogen ratios

after six weeks of experimental trial

77

4.7 Period-acid Schiff (PAS) staining in the liver from Clarias gariepinus

juveniles after 6 weeks in the control (a) or in biofloc system with

increasing carbon/nitrogen ratios; C/N 10, C/N 15 (b) or C/N 20.

78

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4.8 Mean (±SE) survival of Clarias gariepinus challenged with

Aeromonas hydrophila after nine weeks of being cultured in glycerol-

based biofloc systems at increasing carbon/nitrogen ratios

79

5.1 Lemon fin barb hybrid (Hypsibarbus wetmorei × Barbynomus

gonionotus) juveniles

85

5.2 The schematic diagram for experimental set up used for culturing of

African catfish or Lemon fin barb hybrid (LFBH) in biofloc

technology system (BFT) or recirculating aquaculture system (RAS)

87

5.3 Weekly mean (±SE) biofloc volume (mL L-1) produced in biofloc

technology system (BFT) for culturing African catfish or lemon fin

barb hybrid (LFBH) during the 8-week experimental trial

90

5.4 Weekly mean (±SE) ammonia-N concentration (mg L-1) in biofloc

technology system (BFT) or recirculating aquaculture system (RAS)

for culturing African catfish or lemon fin barb hybrid (LFBH) during

the 8-week experimental trial

94

5.5 Weekly mean (±SE) nitrite-N concentration (mg L-1) in biofloc

technology system (BFT) or recirculating aquaculture system (RAS)

for culturing African catfish or lemon fin barb hybrid (LFBH) during

the 8-week experimental trial

94

5.6 Weekly mean (±SE) nitrate-N concentration (mg L-1) in biofloc

technology system (BFT) or recirculating aquaculture system (RAS)

for culturing African catfish or lemon fin barb hybrid (LFBH) during

the 8-week experimental trial

95

6.1 Mean (±SE) weekly ammonia-N in the control or biofloc technology

system (BFT) that used; raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB) as carbon

source for rearing African catfish juveniles over 6 weeks

107

6.2 Mean (±SE) weekly nitrite-N levels (mg L-1) in the control or biofloc

technology system (BFT) that used; raw rice bran (RRB), rice bran

treated with Bacillus sp. with (ResRB) and without aeration (FerRB)

as carbon source for rearing African catfish juveniles over 6 weeks

108

6.3 Mean (±SE) microalgae abundance (RFU) observed in the control or

biofloc technology system (BFT) that used; raw rice bran (RRB), rice

bran treated with Bacillus sp. with (ResRB) and without aeration

(FerRB) as carbon source for rearing African catfish juveniles over 6

weeks

110

6.4 Mean (±SE) total bacteria coliform unit count (log CFU mL-1)

observed fortnightly in the control or biofloc technology system

(BFT) that used; raw rice bran (RRB), rice bran treated with Bacillus

sp. with (ResRB) and without aeration (FerRB) as carbon source for

rearing African catfish juveniles over 6 weeks

110

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6.5 Mean (±SE) weekly biofloc volume (mL L-1) in biofloc technology

system (BFT) that used raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB) as carbon

source for rearing African catfish juveniles over 6 weeks

111

6.6 Mean (±SE) weekly biofloc wet weight (g L-1) in biofloc technology

system (BFT) that used raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB) as carbon

source for rearing African catfish juveniles over 6 weeks

111

6.7 Mean (±SE) weekly biofloc dry weight (g L-1) in biofloc technology

system (BFT) that used raw rice bran (RRB), rice bran treated with

Bacillus sp. with (ResRB) and without aeration (FerRB) as carbon

source for rearing African catfish juveniles over 6 weeks

112

6.8 Sections of the liver (H&E stained) in African catfish juveniles after

6 weeks of culture in the control or in biofloc-based systems with raw

rice bran (RRB), or rice bran treated with Bacillus sp. with aeration

(ResRB) (a) or without aeration (FerRB) (b). There were some

cellular infiltration (CI) in the liver of fish in the RRB and ResRB

treatments as . The control and FerRB showed normal cells (NC) with

sinusoidal structure and no pathological signs. Arrow bar = 10 μm.

116

6.9 Sections of the liver (PAS staining) of the in African catfish juveniles

after 6 weeks of culture in the control or in biofloc-based systems with

raw rice bran (RRB) (a), or rice bran treated with Bacillus sp. with

aeration (ResRB) or without aeration (FerRB) (b). There was

noticeably more PAS-positive material in the liver of fish in the

FerRB treatments compared to the others. Arrow bar = 10 μm.

117

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LIST OF ABBREVIATIONS

ABA antibacterial activity

ALT alanine aminotransferase

Ammonia-N ammonia-nitrogen

ANOVA analysis of variance

AST aspartate aminotransferase

BFT biofloc technology system

BLA bacteriolytic activity

CAT catalase activity

CHO carbohydrate

C/N carbon to nitrogen ratio

DO dissolved oxygen

FerRB pretreated rice bran without aeration (fermentation)

GPX serum glutathione peroxidase

GSH reduced glutathione

GSSG oxidized glutathione

GSSG/GSH oxidized glutathione/reduced glutathione ratio

HMT hematology parameters

HSI hepatosomatic index

LC-PUFA long-chain polyunsaturated fatty acids

LFBH lemon fin barb hybrid

LPD myeloperoxidase

LSZ serum lysosyme activities

MDA malondialdehyde

Min minutes

MUFA monounsaturated fatty acids

ND not determined

Nitrate-N nitrate-nitrogen

Nitrite-N nitrite-nitrogen

PAS periodic-acid Schiff

PCY phagocytic activity

PHA polyhydroxyalkanoates

PHB poly-β-hydroxybutyrate

PO phenoloxidase

PUFA polyunsaturated fatty acids

RAS recirculating aquaculture system

ResRB pretreated rice bran with aeration (Cellular respiration)

RB respiratory burst

RBC red blood cells

RRB raw rice bran

SE standard error

SFA saturated fatty acids

SOD superoxide dismutase

SP serum total protein

TDS total dissolved solid

TAOC total antioxidant

THC total haemocyte count

TIG total immunoglobulin

TSS total suspended solid

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v/v volume for volume

VSI viscerosomatic index

WAI water absorption index

WBC white blood cells

WSI water solubility index

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CHAPTER 1

GENERAL INTRODUCTION

1.1 Background to the study

Global fish production has been increasing steadily in the last six decades, with food fish

supply growing at an average annual rate of 3.2%, which is now outpacing world

population growth at 1.6%. The increment in the last three decades was due to a great

expansion of world food fish aquaculture production with an average annual rate of 6.2%

in the period of 2000–2012 (as against 9.5% in 1990–2000) and from 32.4 million to

66.6 million tonnes. The latest aquaculture production figure stood at 73.8 million tonnes

(FAO, 2016a). The world per capita fish consumption is also on the increase and has

grown from an average of 9.9 kg in the 1960s to 19.2 kg in 2012, 19.7 kg in 2013 and

20.1 kg in 2014, although with wide variation across countries and regions of the world

(FAO, 2014a; FAO, 2016a). The needs to meet-up with increasing fish demand may

necessitate increasing expansion of aquaculture production.

One of the limiting factors to the continued aquaculture expansion is access to both

suitable land and water resources (Widanarni et al., 2012) as well as sustainability issues

associated with pollution from waste products, especially those from intensive

aquaculture systems (Crab et al., 2012). One of the major water quality problems in

intensive aquaculture systems is the accumulation of toxic inorganic nitrogenous

substances (NH3 and NO2-) (Avnimelech, 1999; Avnimelech, 2012), which results from

metabolic by-products of protein catabolism (Romano and Zeng, 2013). Aquatic animals

excrete ammonium that can accumulate to high levels in closed culture systems due to

the high input of feeds with high protein content (Helpher 1988; Crab et al., 2007). This

can subsequently necessitate water exchanges to the surrounding environment to prevent

adverse consequences to the farmed animals, which may include, reduced feed intake,

poor growth, reduced feeding efficiencies, increased susceptibility to bacterial infection

and diseases, gill and tissue damage, extreme lethargy and death (Timmons et al., 2002;

Boyd, 2003; Schneider et al., 2005; Martins et al., 2010).

However, there are increasing regulations regarding the amount of permissible water

exchanges due to concerns over nutrient rich water leading to eutrophication as well as

the potential introduction of pathogens and/or alien species into the open water bodies

(Piedrahita, 2003). Even in areas that have fewer laws regarding water exchanges,

frequent use of this practice can increase pumping costs to the farmer. One approach in

closed aquaculture systems includes encouraging bacterial nitrification process whereby

highly toxic ammonium and nitrites are converted to less toxic nitrate. This is primarily

used in recirculating systems where biofilters are employed as immobile surfaces to serve

as substrates to nitrifying bacteria (Timmons et al., 2002). A large surface area is

typically provided for the nitrifying microorganisms in order to enhance the nitrification

process (Avnimelech, 1999). However, the main disadvantages includes a requirement

to remove solids in the water (i.e. mechanical filtration), which can increase installation

and maintenance costs, along with the accumulation of nitrate to levels that may

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potentially harm the cultured animal (Schneider et al., 2006; Verdegem et al. 2006;

Martins et al., 2010).

There are three primary goals of sustainable aquaculture development. First is to expand

aquaculture production in order to create more products without a major increase in the

use of basic natural resources such as water and land (Avnimelech, 2009). The second is

to develop sustainable aquaculture systems in an environmentally friendly manner

(Naylor et al., 2000). The third involved building up of culture systems that will provide

a good cost/benefit ratio in order to ensure both economic and social sustainability

(Avnimelech, 2009). Biofloc technology (BFT) has the potential to meet all these goals

(Crab et al., 2012).

Biofloc technology is an in situ water treatment method that promotes suspended floc

growth by aggregating both living and dead particulate organic matter, such as

phytoplankton, bacteria, and grazers of the bacteria (Hargreaves, 2006). If the carbon to

nitrogen (C/N) ratio is well elevated in a solution, then potentially toxic nitrogenous

wastes generated by the cultivated organisms will be converted into bacterial biomass

that may be consumed by the fish or crustacean (Schneider et al., 2005; Bossier and

Ekasari, 2017). To elevate the C/N ratio, carbohydrates are often added to the water,

which stimulates heterotrophic bacterial growth that recycles dissolved nitrogen into

microbial protein (Avnimelech, 1999; Crab et al., 2010a). This subsequently decreases

the dissolved nitrogen levels within a few hours while nitrification in conventionally used

biofilters is a much slower process, particularly when the biofilter is new and there is

little nitrifying bacteria present in the water or filters (Hargreaves, 2006; Ebeling et al.,2006). For instance, heterotrophic bacteria produced per substrate is 40 times greater

than that of nitrifying bacteria (Hargreaves, 2006). Typically it takes around 1 – 2 weeks

for a biofilter to become fully established and during this time ammonia and nitrite might

spike to potentially dangerous levels until nitrifying bacteria grow to sufficient numbers

(Martins et al., 2010). In contrast, establishing a biofloc-based system may be achieved

within 3 – 5 days, depending on the type and quantity of the inoculant used, the carbon

type and C/N ratio (Crab et al., 2012; Rajkumar et al., 2016, Perez-Fuentes et al., 2016;

Xu et al., 2016). In addition to being an inexpensive system without any need to invest

in an external water treatment system (Crab et al., 2007), BFT has also been described

as a ‘neutral cost’ in terms of feeding, because it converts carbohydrate to protein.

Different organic carbon sources can be used to establish a biofloc-based system, and

some of these include acetate, sucrose, glucose, glycerol, molasses and rice bran.

However, it is desirable that the carbon source is low-value and readily available. For

example, glycerol is a by-product of biodiesel production, which is readily available at a

cheap cost in most countries of the world (Dube et al., 2007; De Schryver et al., 2008).

Meanwhile, rice bran is another cheap carbon source and is an agricultural by-product

that is readily available in most regions of the world (Oladosu et al., 2016).

To date, most of the research since the early 1980’s on BFT has focused on shrimp

(Serfling, 2006). The general consensus by many researchers is that BFT can improve

water quality maintenance, and if properly managed, can be a zero-exchange system

(Ray et al., 2010; Xu and Pan, 2012; Zhao et al., 2014) and thus increase biosecurity in

shrimp culture systems (Crab et al., 2010b; Kumar et al., 2017). There are some

additional benefits that BFT can provide such as enhancing shrimp growth that has been

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attributed to an additional supply of natural food that may also stimulate digestive

enzyme activities (Xu and Pan, 2012) as well as improving the antioxidant and immune

defense of shrimp (Xu and Pan, 2013; Kim et al., 2014; Souza et al., 2014).

Despite the fact that among aquatic animals finfish constitute the major (66.3%)

aquaculture production (FAO, 2014a), only a few studies have been conducted on the

feasibility and application of BFT to finfish and, moreover, most of these were on tilapia.

The use of BFT has been established to lead to improved water quality, enhanced

growth, digestive enzymes activities and immune responses of Tilapia species. This

improved performance of the fish was suggested to likely due to the ability of tilapia to

collect and consume the small biofloc particles (Long et al., 2015). Similarly in the recent

time, various cyprinids which include rohu (Labeo rohita), bighead carp (Aristichtys nobilis), silver carp (Hypophthalmichthys molitrix) and bottom feeding carp (Cyprinus carpio) were experimented in BFT and improved water quality performance was

observed. However, the less efficient filter feeding common carp (Cyprinus carpio) did

not have an improved growth perfomance, while the bighead carp and silver carp that

were cultured with it in a polyculture system had improved growth benefits (Zhao et al.,2014). In addition to improve growth in Labeo rohita, further experimentaton showed an

improved immune response and resistance to pathogenic bacteria when cultured with

BFT (Ahmad et al., 2016).

African catfish (Clarias gariepinus) has also received some research attention in BFT

and these include optimal C/N ratios for nutrient removal (Abu Bakar et al., 2015),

growth performance of C. gariepinus juveniles in a BFT system (Yusuf et al., 2015) as

well as the reproductive performance and subsequent larval productivity (Ekasari et al.,2016). Most of these studies relied on optimal conditions for tilapia or shrimp culture.

Early researchers assumed that BFT might only be suitable for filter-feeding fish such as

shrimps and tilapia and that more carnivorous fish species, such as C. gariepinus, may

not be a good candidate for BFT (Avnimelech, 2012; Emerenciano et al., 2013).

However, rather than relying on assumption, there is need to test the feasibility of BFT

to this commercially important species as not just a water quality management strategy

but to examine whether BFT can confer additional advantages. This may be

accomplished through comprehensive research to establish basic design and operational

parameters for culture of C. gariepinus in BFT.

1.2 Justification for the study

The development of BFT has been established to be a more sustainable strategy to

manage water quality in aquaculture compared to other systems. Some of these include

flow through systems that continually release nitrogenous wastes and phosphorus into

the environment. Moreover, recirculating aquaculture systems (RAS) employ expensive

filtration methods that generally cannot manage nitrate removal. Despite numerous

research and adoption of BFT in farms, there has been little focus on finfish, possibly

due to assumption that BFT is not applicable to some species in this animal group.

However, this may not necessarily be the case and should be explored. This is because

African catfish are a highly important commercial species that is farmed throughout

Asia, Africa, some parts of Europe and South America as well as requiring high protein

feeds. Therefore, any method that improves their cost-effective production more

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sustainably should greatly improve the prospects of their culture. Some of the lacking

information regarding the optimal operating protocols to the implementation of BFT to

finfish, including African catfish, includes the optimal carbon source and C/N ratio as

well as any influence these have to the nutritional value and production of biofloc and

any subsequent changes to the physiological health status and resistance to diseases. In

a series of experiments, the influence of BFT to the growth, survival, nutritional value,

biochemical composition and physiological health status of African catfish (Clarias gariepinus) were investigated.

1.3 Research objectives

This study primarily seeks to establish the most appropriate conditions for the sustainable

nursery production of C. gariepinus in biofloc-based systems. The specific objectives

were:

1. To identify the most appropriate carbon sources (sucrose, glycerol or rice bran)

for the intensive culture of C. gariepinus juveniles. 2. To determine the optimal carbon to nitrogen (C/N) ratio for nursery culture of

C. gariepinus in a biofloc technology system (BFT).

3. To elucidate whether BFT can improve the immunity of C. gariepinus juveniles and aid in their resistance to bacterial challenge (Aeromonas hydrophila).

4. To examine the effect of feeding habit on the performance of fish culture in

BFT.

5. To investigate the effects of pretreatments on the performance of complex

carbohydrate (rice bran) as carbon source in BFT and the subsequent effect on

the performance of C. gariepinus juveniles reared in the system.

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