cytotoxic activity against human cancer cells

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0 1 2 3 4 5 6 0 2×10 6 4×10 6 6×10 6 8×10 6 Cell-associated Deep IL-15 after loading (μg/1.0 x 10 6 cells) T Cell Expansion AUC (cell number) A375 LS180 SKMEL5 0 50 100 % target lysis Mock-loaded Deep IL-15 Primed SITC 2018 Annual Meeting November 10, 2018 Washington, D.C. Presented: November 10, 2018 Deep TM IL-15 Primed multi-targeted T cells demonstrate potent antigen-specific cytotoxic activity against human cancer cells Shawn P. Carey, Beth Pearce, Darren Smith, Pengpeng Cao, Christine McInnis, Amy Shaw, Jonas Bruun, Fabio Fachin, Becker Hewes, Jonathan B. Fitzgerald, Thomas L. Andresen, Andy Rakestraw Torque Therapeutics, Cambridge, MA Background Adoptive transfer of tumor-directed T cells has demonstrated encouraging clinical efficacy in some hematological and solid tumors. However, widespread success of such therapies has been limited by (1) single-epitope targeting by genetically modified TCR and CAR T cell therapies and (2) insufficient support of transferred T cell survival and function. To direct immune activation in the tumor microenvironment, Torque has developed the Deep-Primed TM T cell therapy platform in which cytotoxic T lymphocytes (CTLs) simultaneously targeting multiple tumor associated antigens (TAA) are primed with immune-stimulatory drugs tethered to their surface to provide localized and sustained support to tumor-directed T cells. This study evaluates cancer cell- directed cytotoxicity by multi-target T cells with and without Deep TM IL-15, which is a cell-associated crosslinked multimer of human IL15-Fc. Methods Cytotoxic T lymphocytes directed against cancer cells expressing TAAincluding MART-1 or PRAME were generated from healthy donors using Torque’s modular TAA-priming approach Slipstream TM (See Figure 2 below and poster P272). The effect of Deep IL-15 priming on bulk and antigen-specific T cell expansion was evaluated. CTL-mediated cytotoxicity was assessed using a panel of partially HLA-matched human cancer cells with diverse TAA expression. Cytotoxic activity was compared with and without Deep IL-15, and time course analysis of CTL function including expansion, activation, and cytotoxicity was used to provide mechanistic understanding of Deep IL-15 impact on anti-cancer cell activity by CTLs. Results Conclusions Tumor-directed T cells generated using Torque’s modular TAA- priming approach elicit potent cytotoxicity against cancer cells expressing multiple TAA including PRAME and MART1. Deep IL-15 enhances the potency of anti-cancer cell activity by increasing antigen-specific cytotoxicity at low E:T ratios and extended time points. By acting as a prolonged cell-tethered source of autocrine IL-15, Deep IL-15 enhances T cell survival and proliferation both prior to and following antigen exposure. Clinical trials evaluating TRQ15-01, Torque’s Deep IL-15 Primed multi-targeted T cells, will initiate later this year. Multi-target T cells demonstrate potent antigen- specific cytotoxic activity against human cancer cells Figure 1. Deep IL-15 provides autocrine cytokine stimulation. Deep IL-15 is a multimer of human IL15-Fc monomers. IL15-Fc monomers consist of two subunits, each consisting of an effector attenuated IgG-Fc fused with an IL-15 receptor α-sushi-domain noncovalently bound to a molecule of IL-15. Deep IL-15 Primed T cells are generated via a loading process in which cells are co-incubated with Deep IL-15 at high concentrations. Surface modifier Cleavable crosslinker IL15-Fc Deep IL-15 T-cell Deep IL-15 Deep IL-15 Primed T Cell Human IgG-Fc Collect cells Isolate monocytes Mature into dendritic cells Proprietary dendritic cells Generate T cells TAA-specific Primed T cells TAA peptides Apheresis Multi-target T cell generation and priming Figure 2. SlipstreamCell Manufacturing platform is a proprietary, high- efficiency T cell manufacturing platform engineered to operate as modular compact factories. Slipstream production is semi-automated and fully closed, which eliminates contamination risk between transfers and can dramatically reduce staffing requirements and the factory footprint. Deep IL-15 promotes extended T cell activation, expansion, and survival upon antigen exposure A 0 1 2 3 4 5 0 10 20 30 0 1 2 3 4 5 0 10 20 30 0 1 2 3 4 5 0 10 20 30 0 1 2 3 4 5 0 10 20 30 T cell count (fold day 0) MART1 – targeted T cells (mock-loaded) Deep IL-15 Primed MART1 – targeted T cells Days in culture Figure 7. (A) Deep IL-15 drives enhanced expansion and activation of MART1 – targeted T cells (76% specificity by tetramer staining) upon antigen exposure. T cells +/- Deep IL-15 cultured alone and in 1:1 co-culture with MART1 neg target cells (RPMI6666) or MART1 pos target cells (RPMI6666 loaded with MART1 26-35 peptide). (B) Deep IL-15 promotes activation (CD25 + ) and prevents apoptosis (Annexin-V + ) in MART1 – targeted T cells on day 5 of co-culture with MART1 pos target cells. Deep IL-15 acts as a cell-tethered source of autocrine IL-15 to support T cell expansion Figure 5. (A) Deep IL-15 loading drives dose-dependent expansion of multi-TAA – targeted T cells. Cell expansion quantified by AUC of cell number over 10 days. (B) Deep IL-15 remains cell-associated over many days, driving more persistent T cell expansion than soluble IL-15. Expansion following media exchanges on indicated days demonstrates persistent function of cell-associated Deep IL-15 versus soluble IL-15. B A Deep IL-15 loading induces dose- dependent T cell expansion over a wide range of loading levels A Mock- Loaded T cells Deep IL-15 Primed T cells Day 1 Day 2 Day 5 Day 0 54.6 60.0 70.5 75.4 53.6 44.6 33.7 20.2 CD3 Tetramer Co-culture of MART1 – targeted T cells +/- Deep IL-15 with MART1 pos or MART1 neg target cells + T cell activation after 24hr co-culture Day 0 co-culture B C + T cell activation after 24hr co-culture Day 2 co-culture 2-day culture Day 0 co-culture Day 2 co-culture CTLs only RPMI6666 RPMI6666+MART1 MeWo SKMEL5 0 20 40 60 80 % activated T cells CTLs only RPMI6666 RPMI6666+MART1 MeWo SKMEL5 0 20 40 60 80 % activated T cells Mock Deep IL-15 Figure 6. (A) Deep IL-15 promotes survival of MART1-specific T cells (HLA- A2/MART 26-35 -PE tetramer + ) in culture over 5 days. T cells were loaded with Deep IL-15 or mock-loaded. Plot illustrates effect of Deep IL-15 on survival of antigen-specific cells from 3 donor lots of MART1 – targeted T cells. (B) Schematic of T cell–cancer cell co- cultures used to evaluate how Deep IL-15-mediated support of antigen-specific cells impacts antigen response. (C) Deep IL-15 loading promotes maximum T cell activation in antigen-positive (RPMI6666 loaded with MART1 26-35 peptide, MeWo, SKMEL5) co- cultures initiated at Day 0 or Day 2. Dashed lines indicate frequency of MART1-specific T cells at co-culture start for mock-treated (gray) and Deep IL-15 Primed (blue) T cells. Deep IL-15 promotes survival of antigen-specific cells to maintain antigen responsiveness of T cells Deep IL-15 enhances multi-target T cell cytotoxic activity against human cancer cells Figure 3. (A) PRAME – targeted T cells trained against a cassette of PRAME peptides exhibit multi-epitope specificity. (B) MART1 – targeted T cells (HLA-A2/MART 26-35 -PE tetramer + ) elicit antigen-restricted cytotoxicity against MART1 neg RPMI6666 pulsed with MART1 26-35 peptide over 5-day co-culture. (C) PRAME – targeted T cells (Lot 1; blue) and MART1 – targeted T cells (Lot 2; orange) demonstrate cytotoxicity against partially HLA-matched antigen-positive solid tumor cells in a short-term (6 hr) cytotoxicity assay. 0 1:5 1:1 5:1 0 50 100 % target lysis RPMI6666 + MART1 26-35 RPMI6666 (MART1 neg ) CD3 Lot 1: PRAME – targeted T cells A 76% Lot 2: MART1 – targeted T cells 0 10 20 40 0 25 50 75 % target lysis A375 PRAME pos MART1 neg 0 10 20 40 0 25 50 75 LS180 PRAME pos MART1 neg 0 10 20 40 0 25 50 75 SKMEL5 PRAME pos MART1 pos B Tetramer Veh.1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 0.0 0.5 1.0 1.5 2.0 Stimulating PRAME peptide %IFN-γ+ CD3 (normalized to DMSO vehicle) Cumulative multi- epitope reactivity: 5.9% C A B Figure 4. (A) Deep IL-15 prolongs cytotoxicity by PRAME – targeted T cells, resulting in enhanced potency by day 4 of co-culture. (B) Time course analysis shows that Deep IL-15 Primed T cells prevent target cancer cell proliferation at later time points following early cytotoxicity measured using a standard 6 hr assay. All cytotoxicity data shown is at 10:1 total T cell : target ratio. Total T cell and antigen-specific T cell : target cell ratios Total T cell 10 20 40 Lot 1 PRAME–specific (5.9% of total) 0.6 1.2 2.4 Lot 2 MART1–specific (76% of total) 7.6 15.2 30.4 Illustration of total T cell and antigen-specific T cell : target cell ratios based upon antigen-specificity of lots Total T cell : target cell ratio Total T cell : target cell ratio Cytotoxicity by PRAME – targeted T cells on day 4 of co-culture Deep IL-15 enhances cancer cell-directed cytotoxicity by multi-target T cells 0 1 2 3 4 0 1 2 3 4 Time in culture (d) Fold target cell luminescence SKMEL5 target cells only + Mock-loaded T cells + Deep IL-15 Primed T cells PRAME – targeted T cells 0.01 0.1 1 10 Fold Ag-specific cells compared to day 0 Donor 3 Donor 1 Donor 2 Mock-loaded Deep IL - 15 Primed Day 5 Activated CD3 Total CD3 Non-activated CD3 0 1 2 3 4 5 0 10 20 30 T cell count (fold day 0) MART1 – T cells MART1 – T cells + MART1 neg target MART1 – T cells + MART1 pos target Day 5: MART1 – T cells + MART1 pos target B Annexin-V CD25 Mock-loaded Deep IL-15 Primed 0 20 40 60 80 % activated T cells 0 20 40 60 80 % Annexin-V+ T cells Mock-loaded MART-1 T cells + MART1 pos targets Deep IL-15 Primed MART-1 T cells + MART1 pos targets Deep IL-15 Primed T cells IL-15-Fc monomer- treated T cells Day of media exchange 0 7 14 0 50 100 0 7 14 0 50 100 0 7 14 0 7 14 No media exchange 1 2 4 Days in culture Fold expansion over day 0 Cell-associated Deep IL-15 promotes persistent T cell expansion Deep IL-15 Primed T cells prevent cancer cell outgrowth at later time points, resulting in improved cytotoxic potency

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Page 1: cytotoxic activity against human cancer cells

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Mock-loadedDeep IL-15 Primed

SITC 2018Annual MeetingNovember 10, 2018Washington, D.C.Presented:November 10, 2018

DeepTM IL-15 Primed multi-targeted T cells demonstrate potent antigen-specific cytotoxic activity against human cancer cells

Shawn P. Carey, Beth Pearce, Darren Smith, Pengpeng Cao, Christine McInnis, Amy Shaw, Jonas Bruun, Fabio Fachin, Becker Hewes, Jonathan B. Fitzgerald, Thomas L. Andresen, Andy Rakestraw Torque Therapeutics, Cambridge, MA

BackgroundAdoptive transfer of tumor-directed T cells has demonstratedencouraging clinical efficacy in some hematological and solidtumors. However, widespread success of such therapies hasbeen limited by (1) single-epitope targeting by geneticallymodified TCR and CAR T cell therapies and (2)insufficient support of transferred T cell survival and function.To direct immune activation in the tumor microenvironment,Torque has developed the Deep-PrimedTM T cell therapyplatform in which cytotoxic T lymphocytes (CTLs)simultaneously targeting multiple tumor associated antigens(TAA) are primed with immune-stimulatory drugs tethered totheir surface to provide localized and sustained support totumor-directed T cells. This study evaluates cancer cell-directed cytotoxicity by multi-target T cells with and withoutDeepTM IL-15, which is a cell-associated crosslinked multimerof human IL15-Fc.

MethodsCytotoxic T lymphocytes directed against cancer cellsexpressing TAA including MART-1 or PRAME were generatedfrom healthy donors using Torque’s modular TAA-primingapproach SlipstreamTM (See Figure 2 below and poster P272).

The effect of Deep IL-15 priming on bulk and antigen-specificT cell expansion was evaluated. CTL-mediated cytotoxicitywas assessed using a panel of partially HLA-matched humancancer cells with diverse TAA expression. Cytotoxic activitywas compared with and without Deep IL-15, and time courseanalysis of CTL function including expansion, activation, andcytotoxicity was used to provide mechanistic understandingof Deep IL-15 impact on anti-cancer cell activity by CTLs.

Results

Conclusions• Tumor-directed T cells generated using Torque’s modular TAA-priming approach elicit potent cytotoxicity against cancer cellsexpressing multiple TAA including PRAME and MART1.

• Deep IL-15 enhances the potency of anti-cancer cell activity byincreasing antigen-specific cytotoxicity at low E:T ratios andextended time points.

• By acting as a prolonged cell-tethered source of autocrine IL-15,Deep IL-15 enhances T cell survival and proliferation both priorto and following antigen exposure.

• Clinical trials evaluating TRQ15-01, Torque’s Deep IL-15 Primedmulti-targeted T cells, will initiate later this year.

Multi-target T cells demonstrate potent antigen-specific cytotoxic activity against human cancer cells

Figure 1. Deep IL-15 provides autocrine cytokine stimulation. Deep IL-15 is amultimer of human IL15-Fc monomers. IL15-Fc monomers consist of two subunits, eachconsisting of an effector attenuated IgG-Fc fused with an IL-15 receptor α-sushi-domainnoncovalently bound to a molecule of IL-15. Deep IL-15 Primed T cells are generated via aloading process in which cells are co-incubated with Deep IL-15 at high concentrations.

Surfacemodifier

Cleavable crosslinker

IL15-Fc Deep IL-15

T-cell

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monocytesMature into

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Primed T cells

TAA peptidesApheresis Multi-target T cell generation and priming

Figure 2. Slipstream™ Cell Manufacturing platform is a proprietary, high-efficiency T cell manufacturing platform engineered to operate as modularcompact factories. Slipstream production is semi-automated and fully closed, whicheliminates contamination risk between transfers and can dramatically reduce staffingrequirements and the factory footprint.

Deep IL-15 promotes extended T cell activation, expansion, and survival upon antigen exposure

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Figure 7. (A) Deep IL-15 drives enhanced expansion and activation of MART1 –targeted T cells (76% specificity by tetramer staining) upon antigen exposure. T cells +/-Deep IL-15 cultured alone and in 1:1 co-culture with MART1neg target cells (RPMI6666)or MART1pos target cells (RPMI6666 loaded with MART126-35 peptide). (B) Deep IL-15promotes activation (CD25+) and prevents apoptosis (Annexin-V+) in MART1 – targetedT cells on day 5 of co-culture with MART1pos target cells.

Deep IL-15 acts as a cell-tethered source of autocrine IL-15 to support T cell expansion

Figure 5. (A) Deep IL-15 loading drives dose-dependent expansion of multi-TAA –targeted T cells. Cell expansion quantified by AUC of cell number over 10 days. (B) DeepIL-15 remains cell-associated over many days, driving more persistent T cell expansionthan soluble IL-15. Expansion following media exchanges on indicated daysdemonstrates persistent function of cell-associated Deep IL-15 versus soluble IL-15.

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Figure 6. (A) Deep IL-15 promotes survival of MART1-specific T cells (HLA-A2/MART26-35-PE tetramer+) in culture over 5 days. T cells were loaded with Deep IL-15or mock-loaded. Plot illustrates effect of Deep IL-15 on survival of antigen-specific cellsfrom 3 donor lots of MART1 – targeted T cells. (B) Schematic of T cell–cancer cell co-cultures used to evaluate how Deep IL-15-mediated support of antigen-specific cellsimpacts antigen response. (C) Deep IL-15 loading promotes maximum T cell activationin antigen-positive (RPMI6666 loaded with MART126-35 peptide, MeWo, SKMEL5) co-cultures initiated at Day 0 or Day 2. Dashed lines indicate frequency of MART1-specificT cells at co-culture start for mock-treated (gray) and Deep IL-15 Primed (blue) T cells.

Deep IL-15 promotes survival of antigen-specific cells to maintain antigen responsiveness of T cells

Deep IL-15 enhances multi-target T cell cytotoxic activity against human cancer cells

Figure 3. (A) PRAME – targeted T cells trained against a cassette of PRAME peptidesexhibit multi-epitope specificity. (B) MART1 – targeted T cells (HLA-A2/MART26-35-PEtetramer+) elicit antigen-restricted cytotoxicity against MART1neg RPMI6666 pulsed withMART126-35 peptide over 5-day co-culture. (C) PRAME – targeted T cells (Lot 1; blue)and MART1 – targeted T cells (Lot 2; orange) demonstrate cytotoxicity against partiallyHLA-matched antigen-positive solid tumor cells in a short-term (6 hr) cytotoxicity assay.

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Figure 4. (A) Deep IL-15 prolongs cytotoxicity by PRAME – targeted T cells, resulting inenhanced potency by day 4 of co-culture. (B) Time course analysis shows that Deep IL-15Primed T cells prevent target cancer cell proliferation at later time points following earlycytotoxicity measured using a standard 6 hr assay. All cytotoxicity data shown is at 10:1total T cell : target ratio.

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Illustration of total T cell and antigen-specific T cell : target cell ratios based upon antigen-specificity of lots

Total T cell : target cell ratio

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Cytotoxicity by PRAME – targetedT cells on day 4 of co-culture

Deep IL-15 enhances cancer cell-directed cytotoxicity by

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Deep IL-15 Primed T cells prevent cancer cell outgrowth at

later time points, resulting in improved cytotoxic potency