contents of volume 191
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Contents of volume 191
VOL. 191 ISSUE 1 27 JANUARY 2006
Selected Papers from the Fourth International Workshop on Environmental Applications of Machine Learning
EditorialThe Fourth International Workshop on Environmental Applications of Machine Learning, 27 September–1 October 2004, Bled, Slovenia
S. Dzeroski, B. Zenko and M. Debeljak (Ljubljana, Slovenia) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
A new synergetic paradigm in environmental numerical modeling: Hybrid models combining deterministic and machine learningcomponentsV.M. Krasnopolsky (College Park, MD, USA and Camp Springs, MD, USA) and M.S. Fox-Rabinovitz (College Park, MD, USA) . . . 5
The application of artificial neural networks to flow and phosphorus dynamics in small streams on the Boreal Plain, with emphasison the role of wetlandsM.H. Nour, D.W. Smith, M.G. El-Din (Ednonton, Canada) and E.E. Prepas (Thunder Bay, Canada and Ednonton, Canada) . . . . 19
Modelling Lake Glumsø with Q2 learningD. Vladusic, B. Kompare and I. Bratko (Ljubljana, Slovenia) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33
Learning to predict channel stability using biogeomorphic featuresS.L. Moret (Baton Rouge, LA, USA), W.T. Langford (Santa Barbara, CA, USA) and D.D. Margineantu (Seattle, WA, USA) . . . 47
Neural network modelling for the analysis of forcings/temperatures relationships at different scales in the climate systemA. Pasini, M. Lorè and F. Ameli (Rome, Italy) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 58
Q2 Prediction of ozone concentrationsJ. Zabkar, R. Zabkar, D. Vladusic, D. Cemas, D. Suc and I. Bratko (Ljubljana, Slovenia) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 68
Habitat mapping using machine learning-extended kernel-based reclassification of an Ikonos satellite imageA. Kobler, S. Dzeroski (Ljubljana, Slovenia) and I. Keramitsoglou (Athens, Greece) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 83
Modelling spatial distribution of the Croatian marine benthic habitatsT. Bakran-Petricioli, O. Antonic, D. Bukovec, D. Petricioli, I. Janekovic, J. Krizan, V. Kusan and S. Dujmovic (Zagreb, Croatia) . . . 96
Using the expert model PERPEST to translate measured and predicted pesticide exposure data into ecological risksP.J. Van den Brink (Wageningen, The Netherlands), C.D. Brown and I.G. Dubus (Bedford, UK) . . . . . . . . . . . . . . . . . . . . . . . . . 106
Sparse regression for analyzing the development of foliar nutrient concentrations in coniferous treesM. Sulkava, J. Tikka and J. Hollmén (HUT, Finland) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 118
Using multi-objective classification to model communities of soil microarthropodsD. Demsar, S. Dzeroski (Ljubljana, Slovenia), T. Larsen (Roskilde, Denmark), J. Struyf (Leuven, Belgium), J. Axelsen, M.B. Pedersen and P.H. Krogh (Roskilde, Denmark) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 131
Automatic construction of concept hierarchies: The case of foliage-dwelling spidersM. Znidarsic, A. Jakulin, S. Dzeroski (Ljubljana, Slovenia) and C. Kampichler (Villahermosa, Mexico) . . . . . . . . . . . . . . . . . . . 144
Application of machine learning methods to palaeoecological dataM. Jeraj (Madison, WI, USA), S. Dzeroski, L. Todorovski and M. Debeljak (Ljubljana, Slovenia) . . . . . . . . . . . . . . . . . . . . . . . 159
Studying crop sequences with CARROTAGE, a HMM-based data mining softwareF. Le Ber (Strasbourg, France and Vandœuvre-lès-Nancy, France), M. Benoît, C. Schott (Mirecourt, France), J.-F. Mari(Vandœuvre-lès-Nancy, France) and C. Mignolet (Mirecourt, France) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 170
Model selection in demographic time series using VC-boundsG. Corani and M. Gatto (Milano, Italy) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 186
Ecological Modelling 191 (2006) 562–564
doi:10.1016/S0304-3800(05)00637-X
VOL. 191 ISSUE 2 31 JANUARY 2006
The importance of spatial autocorrelation, extent and resolution in predicting forest bird occurrenceM.G. Betts (Fredericton, Canada and New Brunswick, Canada), A.W. Diamond, G.J. Forbes (Burnswick, Canada), M.-A. Villard(Moncton, Canada) and J.S. Gunn (Canada) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197
Dynamic growth model for Scots pine (Pinus sylvestris L.) plantations in Galicia (north-western Spain)U. Diéguez-Aranda (Lugo, Spain), F. Castedo Dorado (Ponferrada (León), Spain), J.G. Álvarez González and A.R. Alboreca(Lugo, Spain) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 225
Trophic relationships in the recently impounded Bagré reservoir in Burkina FasoM.C. Villanueva (Castanet Tolosan, France), M. Ouedraogo (Ouagadongou, Burkina Faso) and J. Moreau (Castanet Tolosan,France and Ouagadongou, Burkina Faso) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 243
The residence time of river water in reservoirsF. Rueda, E. Moreno-Ostos (Granada, Spain) and J. Armengol (Barcelona, Spain) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 260
Analysis of the eastern Pacific yellowfin tuna fishery based on multiple management objectivesJ.G. Vaca-Rodríguez and R.R. Enríquez-Andrade (California, Mexico) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 275
Chaos and pattern formation in a spatial tritrophic food chainD.O. Maionchi (São Paulo, Brazil), S.F. dos Reis (Campinas, Brazil) and M.A.M. de Aguiar (São Paulo, Brazil and Massachusetts,USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 291
Causasilty among wildfire, ENSO, timber harvest, and urban sprawl: The vector autoregression approachJ. Gan (College Station, TX, USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 304
VOL. 191 ISSUES 3–4 5 FEBRUARY 2006
System-analytical modelling—Part I. General principles and theoretically best accuracies of ecological models. Soil-moistureexchange in agroecosystemsY.B. Kirsta (Barnaul, Russia) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 315
System-analytical modelling—Part II. Wheat biotime run and yield formation. Agroclimatic potential, the Le Chatelier principle, andchanges in agroclimatic potential and climate in Russia and the U.S.Y.B. Kirsta (Barnaul, Russia) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 331
Physiologically based demographics of Bt cotton–pest interactions. I. Pink bollworm resistance, refuge and riskA.P. Gutierrez (Berkeley, CA, USA) and S. Ponsard (Berkeley, CA, USA and Toulouse, France) . . . . . . . . . . . . . . . . . . . . . . . . 346
Physiologically based demographics of Bt cotton–pest interactions. II. Temporal refuges, natural enemy interactionsA.P. Gutierrez (Berkeley, CA, USA), J.J. Adamczyk, Jr. (Stoneville, MS, USA), S. Ponsard (Berkeley, CA, USA and Toulouse,France) and C.K. Ellis (Berkeley, CA, USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 360
Effects of population size/age structure, condition and temporal dynamics of spawning on reproductive output in Atlantic cod (Gadus morhua)B.E. Scott (Aberdeen, UK), G. Marteinsdottir (Reykjavik, Iceland), G.A. Begg (Townsville, Australia), P.J. Wright (Aberdeen, UK)and O.S. Kjesbu (Bergen, Norway) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 383
Simulated effects of habitat loss and fragmentation on a solitary mustelid predatorH.I. Jager, E.A. Carr and R.A. Efroymson (Oak Ridge, TN, USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 416
Knowledge discovery from models of soil properties developed through data miningE.N. Bui, B.L. Henderson (Canberra, Australia) and K. Viergever (Wageningen, The Netherlands) . . . . . . . . . . . . . . . . . . . . . . . 431
The porous media model for the hydraulic system of a conifer tree: Linking sap flux data to transpiration rateY.-L. Chuang (Durham, NC, USA and Los Angeles, CA, USA), R. Oren (Durham, NC, USA), A.L. Bertozzi (Durham, NC, USAand Los Angeles, CA, USA), N. Phillips (Boston, MA, USA) and G.G. Katul (Durham, NC, USA) . . . . . . . . . . . . . . . . . . . . . . 447
Impact of climate variability on present and Holocene vegetation: A model-based studyJ. Ni (Jena, Germany and Beijing, China), S.P. Harrison, I.C. Prentice (Jena, Germany), J.E. Kutzbach (Madison, WI, USA) and S.Sitch (Potsdam, Germany) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 469
GIS-assisted modelling of the spatial distribution of Qinghai spruce (Picea crassifolia) in the Qilian Mountains, northwestern Chinabased on biophysical parametersC. Zhao, Z. Nan, G. Cheng, J. Zhang and Z. Feng (Lanzhou, China) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 487
Inference for the Richards growth model using Box and Cox transformation and bootstrap techniquesS. Loibel, J.B.R. do Val (Campinas, Brazil) and M.G. Andrade (São Carlos, Brazil) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 501
One large, several medium, or many small?S.-R. Zhou (Beijing, PR China and Gansu, PR China) and G. Wang (Gansu, PR China) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 513
Optimal estimation of parameters for a estuarine eutrophication modelJ. Shen (Gloucester Point, VA, USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 521
Contents of volume 191 563
Short communicationsCatch crops affect nitrogen dynamics in organic farming systems without livestock husbandry—Simulations with the DAISY model
T. Müller (Stuttgart, Germany), K. Thorup-Kristensen (Denmark), J. Magid, L.S. Jensen and S. Hansen (Frederiksberg,Denmark) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 538
How to detect and visualize extinction thresholds for structured PVA modelsH. Hildenbrandt (Bremen, Germany), M.S. Müller and V. Grimm (Leipzig, Germany) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 545
Emergence of ratio-dependent and predator-dependent functional responses for pollination mutualism and seed parasitismD.L. DeAngelis (Coral Gables, FL, USA) and J.N. Holland (Houston, TX, USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 551
Author index of volume 191 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 557Subject index of volume 191 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 559Contents of volume 191 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 562
564 Contents of volume 191