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www.elsevier.com/locate/jcp 0021-9991(20140515)265:C;1-8 Vol. 265, 15 May 2014 Abstracted/indexed in ACM Guide to Computing Literature, Chemical Abstracts, CompuMath Citation Index, Current Contents/ Physics / Chemistry & Earth Science, Excerpta Medica, Mathematical Reviews, Research Alert, Science Abstracts, Science Citation Index. Also covered in the abstract and citation database Scopus ® . Full text available on ScienceDirect ® CONTENTS 1 Minimization for conditional simulation: Relationship to optimal transport D.S. Oliver 16 High order full discretizations of coupled wave equations with absorbing boundary conditions and geometric integration I. Alonso-Mallo and A.M. Portillo 34 Level set reinitialization at a contact line G. Della Rocca and G. Blanquart 50 Single-cone real-space finite difference scheme for the time-dependent Dirac equation R. Hammer, W. Pötz and A. Arnold 71 Peridynamic thermal diffusion S. Oterkus, E. Madenci and A. Agwai 97 Fast evaluation of a time-domain non-linear cochlear model on GPUs D. Sabo, O. Barzelay, S. Weiss and M. Furst 113 Energy-conserving dissipative particle dynamics with temperature-dependent properties Z. Li, Y.-H. Tang, H. Lei, B. Caswell and G.E. Karniadakis 128 Numerical aspects in modeling high Deborah number flow and elastic instability Y. Kwon 145 Massively-parallel electron dynamics calculations in real-time and real-space: Toward applica- tions to nanostructures of more than ten-nanometers in size M. Noda, K. Ishimura, K. Nobusada, K. Yabana and T. Boku 156 ODE solvers using band-limited approximations G. Beylkin and K. Sandberg 172 Multigrid lattice Boltzmann method for accelerated solution of elliptic equations D.V. Patil, K.N. Premnath and S. Banerjee 195 Finite difference methods for the time fractional diffusion equation on non-uniform meshes Y.-n. Zhang, Z.-z. Sun and H.-l. Liao 211 On high order finite-difference metric discretizations satisfying GCL on moving and deforming grids B. Sjögreen, H.C. Yee and M. Vinokur 221 A second order virtual node algorithm for Navier–Stokes flow problems with interfacial forces and discontinuous material properties C. Schroeder, A. Stomakhin, R. Howes and J.M. Teran 246 Approximated Lax pairs for the reduced order integration of nonlinear evolution equations J.-F. Gerbeau and D. Lombardi

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www.elsevier.com/locate/jcp

0021-9991(20140515)265:C;1-8

Vol. 265, 15 May 2014

Abstracted/indexed in ACM Guide to Computing Literature, Chemical Abstracts, CompuMath Citation Index, Current Contents/Physics / Chemistry & Earth Science, Excerpta Medica, Mathematical Reviews, Research Alert, Science Abstracts, Science CitationIndex. Also covered in the abstract and citation database Scopus ®. Full text available on ScienceDirect ®

CONTENTS

1 Minimization for conditional simulation: Relationship to optimal transportD.S. Oliver

16 High order full discretizations of coupled wave equations with absorbing boundary conditionsand geometric integration

I. Alonso-Mallo and A.M. Portillo

34 Level set reinitialization at a contact lineG. Della Rocca and G. Blanquart

50 Single-cone real-space finite difference scheme for the time-dependent Dirac equationR. Hammer, W. Pötz and A. Arnold

71 Peridynamic thermal diffusionS. Oterkus, E. Madenci and A. Agwai

97 Fast evaluation of a time-domain non-linear cochlear model on GPUsD. Sabo, O. Barzelay, S. Weiss and M. Furst

113 Energy-conserving dissipative particle dynamics with temperature-dependent propertiesZ. Li, Y.-H. Tang, H. Lei, B. Caswell and G.E. Karniadakis

128 Numerical aspects in modeling high Deborah number flow and elastic instabilityY. Kwon

145 Massively-parallel electron dynamics calculations in real-time and real-space: Toward applica-tions to nanostructures of more than ten-nanometers in size

M. Noda, K. Ishimura, K. Nobusada, K. Yabana and T. Boku

156 ODE solvers using band-limited approximationsG. Beylkin and K. Sandberg

172 Multigrid lattice Boltzmann method for accelerated solution of elliptic equationsD.V. Patil, K.N. Premnath and S. Banerjee

195 Finite difference methods for the time fractional diffusion equation on non-uniform meshesY.-n. Zhang, Z.-z. Sun and H.-l. Liao

211 On high order finite-difference metric discretizations satisfying GCL on moving and deforminggrids

B. Sjögreen, H.C. Yee and M. Vinokur

221 A second order virtual node algorithm for Navier–Stokes flow problems with interfacial forcesand discontinuous material properties

C. Schroeder, A. Stomakhin, R. Howes and J.M. Teran

246 Approximated Lax pairs for the reduced order integration of nonlinear evolution equationsJ.-F. Gerbeau and D. Lombardi